Citrus Sinensis ID: 016493

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
Protein Sequence
MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Secondary Structure (PSIPRED)
ccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccHHHHHHHHHHcccHHHHHHHHccccccccccccEEEEcccHHHHHHHHHHHHHccEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEEEcccccHHHHHHHHHHHHHHHEEEHHHcccccHccHccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEcccHHHccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHccccccEEEEccEEEEcccHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEHHHHHHHEEEccccccccccc
Coil and Loop (DISEMBL)
MMSTGVVLAVGfqlsggdsqmNALIWYSWLGGIIIGTMVGANMVLEehckagprnvvitgstrgLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGmmaaggsskknLVHAKVAGiacdvcepadvqklsnfavnefgsidiwinnagtnkgfkpllqFTNEEIEQIVSTNLVGSILCTREAMRVmrdqpkgghifnmdgagsggsstpltavygstkcgLRQLQASLFkeskrskvgvhtaspgmVLTDLLLSGSTIQNKQMFNIICELPETVARTLVprirvvkgsgkainyltpPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILsstgsntfpgt
Flexible Loop (DISEMBL)
MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREfllsgdrvvvasrssesvrmTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLfkeskrskvgvhtaspgmVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVkgsgkainyltpprILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIIlsstgsntfpgt
Low Complexity Region (SEG)
MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDrvvvasrssesvrMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Disordered region (IsUnstruct)
****GVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA*******************************NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM********IF*************LTAVYGSTKCGLRQLQASLF*******VGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILS**********
Disordered Region (DISOPRED)
***TGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVL*E*CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAA********************MEMYTENTWVSVFSLSVVCAFIILSST********
Disordered Region (DISEMBL)
MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE********HTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Disordered Region (DISPRO)
**STGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	388	2.2.26 [Sep-21-2011]
Q5N800	504	Probable chlorophyll(ide)	yes	no	0.997	0.767	0.829	0.0
Q93ZA0	496	Probable chlorophyll(ide)	yes	no	1.0	0.782	0.814	0.0
Q84ST4	343	Chlorophyll(ide) b reduct	no	no	0.582	0.658	0.471	6e-55
Q8LEU3	348	Chlorophyll(ide) b reduct	no	no	0.590	0.658	0.464	4e-53
P39483	261	Glucose 1-dehydrogenase 2	no	no	0.476	0.708	0.307	6e-16
Q08632	271	Short-chain type dehydrog	N/A	no	0.512	0.734	0.288	1e-15
P07999	262	Glucose 1-dehydrogenase B	no	no	0.484	0.717	0.299	2e-15
Q6NUE2	236	Carbonyl reductase family	N/A	no	0.458	0.754	0.297	3e-14
Q59787	256	Sorbitol dehydrogenase OS	yes	no	0.463	0.703	0.272	3e-14
O31680	248	Uncharacterized oxidoredu	yes	no	0.456	0.713	0.278	4e-14

>sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/388 (82%), Positives = 357/388 (92%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMS+GVVL VGFQLSGGDSQMN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITG
Sbjct: 118 MMSSGVVLGVGFQLSGGDSQMNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITG 177

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRVV+ASRS ESV  T+ ELEEN++EG+  A    ++ L+HAK
Sbjct: 178 STRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAK 237

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V G +CDVC+P DV+KL NFA +E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNL
Sbjct: 238 VVGTSCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNL 297

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGS+LCTREAM VM+ Q KGGH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL KES
Sbjct: 298 VGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKES 357

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           +RSKVGVHTASPGMVLTDLLLSGS+++NKQMFN+ICELPETVARTLVPR+RVVKGSGKAI
Sbjct: 358 RRSKVGVHTASPGMVLTDLLLSGSSLRNKQMFNLICELPETVARTLVPRMRVVKGSGKAI 417

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAW+RRGRWFD++GRA+YAAEADRIRNWAE+RARFSFTDAMEMYTEN
Sbjct: 418 NYLTPPRILLALVTAWVRRGRWFDEEGRAVYAAEADRIRNWAESRARFSFTDAMEMYTEN 477

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILSS+G    PGT
Sbjct: 478 TWVSVFSLSVVCAFIILSSSG-GPLPGT 504

Required for proper chloroplast degradation. Involved in chlorophyll b degradation.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4

>sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/388 (81%), Positives = 348/388 (89%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           M STG +L +GFQLSGGDS MN+L+WYSWLGGIIIGTM GANMVLE+H +AGPRNVVITG
Sbjct: 109 MTSTGAILLIGFQLSGGDSSMNSLVWYSWLGGIIIGTMTGANMVLEDHYRAGPRNVVITG 168

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRV+V SRSSESV MTV ELE+NLKE M  A  S++K L  AK
Sbjct: 169 STRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAK 228

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GIACDVC+P DV+KLSNFAV E GSI+IWINNAGTNKGF+PLL+FT E+I QIVSTNL
Sbjct: 229 VVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNL 288

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           +GSILCTR AM VM  Q  GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ   S+ KES
Sbjct: 289 IGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKES 348

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           +++ VG+HTASPGMVLT+LLLSGS+I+NKQMFNIICELPETVARTLVPR+RVVKGSGKA+
Sbjct: 349 QKTNVGLHTASPGMVLTELLLSGSSIKNKQMFNIICELPETVARTLVPRMRVVKGSGKAV 408

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLA+VT+WLRRGRWFDDQGRALYAAEADR+RNWAENR R S TDAMEMYTEN
Sbjct: 409 NYLTPPRILLAIVTSWLRRGRWFDDQGRALYAAEADRLRNWAENRTRLSLTDAMEMYTEN 468

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIIL ST  ++FPGT
Sbjct: 469 TWVSVFSLSVVCAFIILQSTTPSSFPGT 496

Involved in chlorophyll b degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1

 Score =  215 bits (547), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/246 (47%), Positives = 158/246 (64%), Gaps = 20/246 (8%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           P NV+ITGST+G+G ALA+EFL +GD VV+ SRS+E V   VT+L               
Sbjct: 73  PYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDL--------------- 117

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEE 171
           KK      V GI CDV E  DV+ L +FA ++   IDIWINNAG+N   +KPL++ ++E 
Sbjct: 118 KKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEA 177

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
           + ++++TN +G ++C REA+ +MR+QP+GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct: 178 LMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 237

Query: 232 LQASLFKESKRSKVG---VHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLV 287
           L  SL  E + ++V    VH  SPGMV TDLL+SG+T +  + F NI+ E    VA  LV
Sbjct: 238 LTKSLQAELQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLV 297

Query: 288 PRIRVV 293
           P IR +
Sbjct: 298 PNIRAI 303

Required for chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1

 Score =  209 bits (531), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/250 (46%), Positives = 151/250 (60%), Gaps = 21/250 (8%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           P N++ITGST+G+G ALAREFL +GD VV+ SRS+E V   V  L+E   E         
Sbjct: 79  PYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE--------- 129

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEE 171
                   V G  CDV E  DV++L  ++      IDIWINNAG+N   FKPL + ++E+
Sbjct: 130 -------HVWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDED 182

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
           + ++V TN +G +LC REAM +M  Q +GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct: 183 LIEVVKTNTLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 242

Query: 232 LQASLFKESKRSKVG---VHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLV 287
           L  SL  E +   V    VH  SPGMV TDLL+SG+T +  + F N++ E  E VA  LV
Sbjct: 243 LTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLV 302

Query: 288 PRIRVVKGSG 297
           P IR +  SG
Sbjct: 303 PNIRAIPASG 312

Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|P39483|DHG2_BACME Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1

 Score = 85.5 bits (210), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 20/205 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT-ELEENLKEGMMAAGGSSKK 114
           VV+TG ++GLG+A+A  F     +VVV  RS+E   + V  E+EE   + ++  G     
Sbjct: 10  VVVTGGSKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQAIIVRG----- 64

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                       DV +  DV  L   AV EFGS+D+ INNAG      P  + + E   Q
Sbjct: 65  ------------DVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPV-PSHELSLENWNQ 111

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           ++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ +  
Sbjct: 112 VIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMTE 170

Query: 235 SLFKESKRSKVGVHTASPGMVLTDL 259
           +L  E     + V+   PG + T +
Sbjct: 171 TLALEYAPKGIRVNNIGPGAIDTPI 195

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q08632|SDR1_PICAB Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1

 Score = 84.7 bits (208), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 19/218 (8%)

Query: 52  GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 111
           G R  ++TG++RG+G+ +A      G +VV+   S++     V  +  N           
Sbjct: 20  GGRVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINN----------- 68

Query: 112 SKKNLVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFT 168
            K       V  I C  DV EP+ V +L + A + FG + I +NNAG T+  +  L Q +
Sbjct: 69  -KSPSSGDGVRAIVCKADVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTS 127

Query: 169 NEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 227
           +EE ++I   N  G+ LC+REA  RV+R    GG I N+  +       P    Y ++K 
Sbjct: 128 DEEWDRIFQVNCKGAFLCSREAAKRVVRG--GGGRIINISSSLV-AMPIPRYGAYTASKA 184

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
            +  +   L +E + +++  +  +PG V TD+  +G +
Sbjct: 185 AVEMMTRILAQELRGTQITANCVAPGPVATDMFFAGKS 222

Picea abies (taxid: 3329)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P07999|DHGB_BACME Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 16/204 (7%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VVITGS+ GLGK++A  F     +VVV  RS E    +V  LEE +K+            
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEEIKK------------ 55

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
            V  +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 56  -VGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGMENPVSSH-EMSLSDWNKV 113

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 114 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTET 173

Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L  E     + V+   PG + T +
Sbjct: 174 LALEYAPKGIRVNNIGPGAINTPI 197

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q6NUE2|CBR4_XENLA Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 24/202 (11%)

Query: 58  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 117
           + G +RG+GKA+A+       +V V SR+ E  +  VTE+  +L                
Sbjct: 7   VFGGSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEIGAHL---------------- 50

Query: 118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 177
                 ++CDV +  ++Q       N  G+ID  +N+AG ++    LL+  +E+I  ++S
Sbjct: 51  -----ALSCDVSKENEIQCTFKEIKNNLGNIDYLVNSAGISRD-ALLLRTRSEDIMSLLS 104

Query: 178 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 237
            NLVG+I   + A++ M  Q +GG I N+ G+  G       ++YG++K GL     SL 
Sbjct: 105 INLVGTIQTCKVALKGMIQQ-QGGSIVNI-GSIVGHKGNIGQSIYGASKEGLIGFSKSLA 162

Query: 238 KESKRSKVGVHTASPGMVLTDL 259
           KE  +  + V+  +PG + TD+
Sbjct: 163 KEVAKRNIRVNVVAPGFIRTDM 184

The heteroteramer with HSD17B8 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria. The homotetramer may act as NADPH-dependent quinone reductase. Has broad substrate specificity and reduces 9,10-phenanthrenequinone, 1,4-benzoquinone and various other o-quinones and p-quinones (in vitro).

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q59787|DHSO_RHOSH Sorbitol dehydrogenase OS=Rhodobacter sphaeroides GN=polS PE=1 SV=1

 Score = 79.7 bits (195), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITGS RG+G+A A  ++  G RV +A  + E+ R T  E                 
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE----------------- 48

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              +      IA DV + A + +     ++ +GSIDI +NNA       P+++ T E  +
Sbjct: 49  ---IGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYD 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G++   +   R M    +GG I NM  + +G     L  VY +TK  +  L 
Sbjct: 105 RLFAINVSGTLFMMQAVARAMIAGGRGGKIINM-ASQAGRRGEALVGVYCATKAAVISLT 163

Query: 234 ASLFKESKRSKVGVHTASPGMV 255
            S      R  + V+  +PG+V
Sbjct: 164 QSAGLNLIRHGINVNAIAPGVV 185

Catalyzes the oxidation of D-glucitol (sorbitol) to D-fructose, galactitol to D-tagatose and of L-iditol.

Rhodobacter sphaeroides (taxid: 1063)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|O31680|YKVO_BACSU Uncharacterized oxidoreductase YkvO OS=Bacillus subtilis (strain 168) GN=ykvO PE=3 SV=1

 Score = 79.7 bits (195), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 24/201 (11%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG T G+G A A++F+  G  V +  R    +   V ++ +N                
Sbjct: 10  LVTGGTSGIGLATAQKFVNEGAYVYITGRRQNELDKAVNQIGKN---------------- 53

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
               V G+  D+ +  D+ KL +    E G +DI   NAG    F PL + T E++++  
Sbjct: 54  ----VTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGIGN-FLPLGEITEEQVDRTF 108

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+ G+I   ++A+ +  D  K G I  + G+ +G    P  +VYG++K  LR L  + 
Sbjct: 109 DINVKGTIFTVQKALSLFPD--KVGSII-VTGSTAGSIGNPAFSVYGASKAALRALVRNW 165

Query: 237 FKESKRSKVGVHTASPGMVLT 257
             + K +++ V+  SPG +LT
Sbjct: 166 ILDLKGTEIRVNVVSPGGILT 186

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
356520529	514	PREDICTED: probable chlorophyll(ide) b r	0.997	0.752	0.868	0.0
255546477	517	short-chain dehydrogenase, putative [Ric	0.997	0.748	0.902	0.0
449506622	521	PREDICTED: probable chlorophyll(ide) b r	0.994	0.740	0.873	0.0
449464672	521	PREDICTED: probable chlorophyll(ide) b r	0.994	0.740	0.871	0.0
356531269	515	PREDICTED: probable chlorophyll(ide) b r	0.997	0.751	0.853	0.0
224142147	436	predicted protein [Populus trichocarpa]	0.992	0.883	0.894	0.0
225445234	517	PREDICTED: probable chlorophyll(ide) b r	0.997	0.748	0.889	0.0
357500769	514	Oxidoreductase [Medicago truncatula] gi|	0.997	0.752	0.847	0.0
357128420	496	PREDICTED: probable chlorophyll(ide) b r	0.997	0.780	0.835	0.0
242055895	512	hypothetical protein SORBIDRAFT_03g00110	0.997	0.755	0.835	0.0

>gi|356520529|ref|XP_003528914.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Glycine max]

 Score =  706 bits (1823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/388 (86%), Positives = 364/388 (93%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGV+L++GFQ+SGGDSQM+ALIWYSWLGG+IIGTM+GANMVLEEHC+AGPRNVVITG
Sbjct: 128 MMSTGVILSIGFQMSGGDSQMDALIWYSWLGGVIIGTMIGANMVLEEHCRAGPRNVVITG 187

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRV+V SRS ESV+ T+ ELEENLKEG+  A GSS   L HAK
Sbjct: 188 STRGLGKALAREFLLSGDRVIVTSRSPESVQATIKELEENLKEGIANAVGSSLTKLSHAK 247

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GIACDVCEP DVQ+L+NFAV E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNL
Sbjct: 248 VVGIACDVCEPHDVQRLANFAVKELGHIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNL 307

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGSILCTREAMRVMR+Q   GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE 
Sbjct: 308 VGSILCTREAMRVMRNQAIAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKEC 367

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           KRSKVGVHTASPGMVLTDLLLSGST+QN+QMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 368 KRSKVGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELPETVARTLVPRMRVVKGTGKAI 427

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADR+RNWAE+RARFSFTDAMEMYTEN
Sbjct: 428 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRLRNWAEDRARFSFTDAMEMYTEN 487

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TW+SVFSLSVVCAFIILSSTGSN  PGT
Sbjct: 488 TWLSVFSLSVVCAFIILSSTGSN-LPGT 514

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546477|ref|XP_002514298.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223546754|gb|EEF48252.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/388 (90%), Positives = 371/388 (95%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGV+LAVGFQLSGGDSQMN LIWYSWLGGIIIGTM+GANMVL+EHC+AGPRNVVITG
Sbjct: 131 MMSTGVILAVGFQLSGGDSQMNTLIWYSWLGGIIIGTMIGANMVLDEHCRAGPRNVVITG 190

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRVVVASRS ESV  TV ELEENLKEGM+   G+S+ NL HAK
Sbjct: 191 STRGLGKALAREFLLSGDRVVVASRSPESVDTTVRELEENLKEGMVTTSGTSRTNLAHAK 250

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GIAC+VCEP+DVQKL+NFAV EFGSIDIWINNAGTNKGF+PLLQF++E+I QIVSTNL
Sbjct: 251 VVGIACNVCEPSDVQKLANFAVKEFGSIDIWINNAGTNKGFRPLLQFSDEDINQIVSTNL 310

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGSILCTREAMRV+ +QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 
Sbjct: 311 VGSILCTREAMRVIMNQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKEC 370

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           KRSKVGVHTASPGMVLTDLLLSGST++NKQMFNIICELPETVARTLVPR+RVVKGSGKAI
Sbjct: 371 KRSKVGVHTASPGMVLTDLLLSGSTLKNKQMFNIICELPETVARTLVPRMRVVKGSGKAI 430

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAWLR+GRWFDDQGRALYAAEADR+RNWAENRARFSFTDAMEMYTEN
Sbjct: 431 NYLTPPRILLALVTAWLRQGRWFDDQGRALYAAEADRLRNWAENRARFSFTDAMEMYTEN 490

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILSST SN FPGT
Sbjct: 491 TWVSVFSLSVVCAFIILSST-SNPFPGT 517

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506622|ref|XP_004162801.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Cucumis sativus]

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/388 (87%), Positives = 363/388 (93%), Gaps = 2/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGVVLAVGFQLSGGDSQMN LIWYSWLGG+IIGTM+GANMVLEEHC AGPRNVVITG
Sbjct: 136 MMSTGVVLAVGFQLSGGDSQMNTLIWYSWLGGVIIGTMIGANMVLEEHCSAGPRNVVITG 195

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRVVVASRSSESV+ T+ ELEENLK G+M   GSS K+L HAK
Sbjct: 196 STRGLGKALAREFLLSGDRVVVASRSSESVQETLRELEENLK-GLMVRSGSSNKSLAHAK 254

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V G  C+VC+P DV KL+NF +NE GSIDIWINNAGTNKGF+PLLQFT+E+I QI+STNL
Sbjct: 255 VVGTTCNVCDPEDVHKLANFTLNELGSIDIWINNAGTNKGFRPLLQFTDEDITQILSTNL 314

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGS+LCTREAMRVMR+Q KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ+SL KE 
Sbjct: 315 VGSLLCTREAMRVMRNQAKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQSSLLKEC 374

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           +RS VGVHTASPGMVLTDLLLSGST++NKQMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 375 RRSNVGVHTASPGMVLTDLLLSGSTVRNKQMFNIICELPETVARTLVPRMRVVKGTGKAI 434

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR RFSFTDAMEMYTEN
Sbjct: 435 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRTRFSFTDAMEMYTEN 494

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILS+T +NT PGT
Sbjct: 495 TWVSVFSLSVVCAFIILSTT-NNTLPGT 521

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464672|ref|XP_004150053.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Cucumis sativus]

 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/388 (87%), Positives = 362/388 (93%), Gaps = 2/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGVVLAVGFQLSGGDSQMN LIWYSWLGG+IIGTM+GANMVLEEHC AGPRNVVITG
Sbjct: 136 MMSTGVVLAVGFQLSGGDSQMNTLIWYSWLGGVIIGTMIGANMVLEEHCSAGPRNVVITG 195

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRVVVASRSSESV+ T+ ELEENLK G+M   GSS K+L HAK
Sbjct: 196 STRGLGKALAREFLLSGDRVVVASRSSESVQETLRELEENLK-GLMVRSGSSNKSLAHAK 254

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V G  C+VC+P DV KL+NF +NE GSIDIWINNAGTNKGF+PLLQFT+E+I QI+STNL
Sbjct: 255 VVGTTCNVCDPEDVHKLANFTLNELGSIDIWINNAGTNKGFRPLLQFTDEDITQILSTNL 314

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGS+LCTREAMRVMR+Q KGG IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ+SL KE 
Sbjct: 315 VGSLLCTREAMRVMRNQAKGGQIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQSSLLKEC 374

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           +RS VGVHTASPGMVLTDLLLSGST++NKQMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 375 RRSNVGVHTASPGMVLTDLLLSGSTVRNKQMFNIICELPETVARTLVPRMRVVKGTGKAI 434

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR RFSFTDAMEMYTEN
Sbjct: 435 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRTRFSFTDAMEMYTEN 494

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILS+T +NT PGT
Sbjct: 495 TWVSVFSLSVVCAFIILSTT-NNTLPGT 521

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531269|ref|XP_003534200.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Glycine max]

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/388 (85%), Positives = 363/388 (93%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGV+L++GFQ+SGGDSQM+ALIWYSWLGG+IIGTM+GANMVLEEHC+AGPRNVVITG
Sbjct: 129 MMSTGVILSIGFQMSGGDSQMDALIWYSWLGGVIIGTMIGANMVLEEHCRAGPRNVVITG 188

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRV+V SRS ESV+ T+ ELEENLKEG+  A GSS   L  AK
Sbjct: 189 STRGLGKALAREFLLSGDRVIVTSRSPESVQDTIKELEENLKEGIANAVGSSLTKLSQAK 248

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GI+CDVCEP DVQ+L+NFAV E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNL
Sbjct: 249 VIGISCDVCEPHDVQRLANFAVKELGHIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNL 308

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGSILCTREA+R+MR+Q   GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE 
Sbjct: 309 VGSILCTREAVRIMRNQANAGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKEC 368

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           KRSKVGVHTASPGMVLTDLLLSGST+QN+QMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 369 KRSKVGVHTASPGMVLTDLLLSGSTVQNRQMFNIICELPETVARTLVPRMRVVKGTGKAI 428

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLAL+TAWLR+GRWFDDQGRALYAAEADR+RNWAE+RARFSFTDAMEMYTEN
Sbjct: 429 NYLTPPRILLALITAWLRQGRWFDDQGRALYAAEADRLRNWAEDRARFSFTDAMEMYTEN 488

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TW+SVFSLSVVCAFIILSSTGSN  PGT
Sbjct: 489 TWLSVFSLSVVCAFIILSSTGSN-LPGT 515

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142147|ref|XP_002324420.1| predicted protein [Populus trichocarpa] gi|222865854|gb|EEF02985.1| predicted protein [Populus trichocarpa]

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/388 (89%), Positives = 372/388 (95%), Gaps = 3/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGVVLAVGFQLSGGDSQMN LIWYSWLGGIIIGTM+GANMVL+EHC+AGPRNVVITG
Sbjct: 52  MMSTGVVLAVGFQLSGGDSQMNTLIWYSWLGGIIIGTMIGANMVLDEHCRAGPRNVVITG 111

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGD VVVASRS ESV  T+ ELEENLKEGM+ A  S++ +L HAK
Sbjct: 112 STRGLGKALAREFLLSGDHVVVASRSPESVDTTIRELEENLKEGMITA--SNRTSLAHAK 169

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GIACDVCEP+DVQKL+NFAVNEFGSIDIWINNAGTNKGF+PLLQFT+E+I+QIVSTNL
Sbjct: 170 VVGIACDVCEPSDVQKLANFAVNEFGSIDIWINNAGTNKGFRPLLQFTDEDIKQIVSTNL 229

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGSILCT+EAMR+M +QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL KE 
Sbjct: 230 VGSILCTQEAMRMMMNQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLLKEC 289

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           KRSKVG+HTASPGMVLTDLLLSGST++NKQMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 290 KRSKVGIHTASPGMVLTDLLLSGSTLKNKQMFNIICELPETVARTLVPRMRVVKGTGKAI 349

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           +YLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADR+RNWAENRA+FSFTDAMEMYTEN
Sbjct: 350 SYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRLRNWAENRAQFSFTDAMEMYTEN 409

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILSSTGS TFPGT
Sbjct: 410 TWVSVFSLSVVCAFIILSSTGS-TFPGT 436

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445234|ref|XP_002280953.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic [Vitis vinifera] gi|297738824|emb|CBI28069.3| unnamed protein product [Vitis vinifera]

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/388 (88%), Positives = 367/388 (94%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGV+LA+GFQLSGGDSQMNALIWYSWLGGIIIGTM+GAN+VLEEHC+AGPRNVVITG
Sbjct: 131 MMSTGVILAIGFQLSGGDSQMNALIWYSWLGGIIIGTMIGANLVLEEHCRAGPRNVVITG 190

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRVVVASRS ESV  TV ELEENLKEGM+ AGG SK NL  AK
Sbjct: 191 STRGLGKALAREFLLSGDRVVVASRSPESVHATVRELEENLKEGMVTAGGPSKTNLERAK 250

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GIACDVCEP DVQKL+NFAV+EFGSI+IWINNAGTNKGF+PLLQFT+E+I+QIVSTNL
Sbjct: 251 VVGIACDVCEPDDVQKLANFAVSEFGSINIWINNAGTNKGFRPLLQFTDEDIKQIVSTNL 310

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGS+LCT+EA+RVMR Q  GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE 
Sbjct: 311 VGSLLCTQEAIRVMRSQGNGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKEC 370

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           KRS VGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 371 KRSNVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRMRVVKGTGKAI 430

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLAL+T WLR+GRWFD+QGRALYAAEADRIRNWAENR RFSFTDAMEMYTEN
Sbjct: 431 NYLTPPRILLALITVWLRQGRWFDEQGRALYAAEADRIRNWAENRTRFSFTDAMEMYTEN 490

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILSSTGS +FPGT
Sbjct: 491 TWVSVFSLSVVCAFIILSSTGS-SFPGT 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500769|ref|XP_003620673.1| Oxidoreductase [Medicago truncatula] gi|355495688|gb|AES76891.1| Oxidoreductase [Medicago truncatula]

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/388 (84%), Positives = 358/388 (92%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMSTGV+LA+GFQ+SGGDSQM+ALIWYSWLGG+IIGTM+GAN VLE++C+ GPRNVVITG
Sbjct: 128 MMSTGVILAIGFQMSGGDSQMDALIWYSWLGGVIIGTMIGANWVLEDYCREGPRNVVITG 187

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRV+V SRS ESV+ TV ELEENLKEG+  A GSS   L  AK
Sbjct: 188 STRGLGKALAREFLLSGDRVIVTSRSPESVQATVKELEENLKEGIANAVGSSLTKLSQAK 247

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GIACDVCE  DVQ+L+NFAV+E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNL
Sbjct: 248 VVGIACDVCEANDVQRLANFAVSELGYIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNL 307

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGSILCTREAMR+MR+Q K GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ   SL  E 
Sbjct: 308 VGSILCTREAMRIMRNQTKPGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSLLTEC 367

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           KRSKVGVHTASPGMVLT+LLLSGSTIQNKQMFNIICELPETVARTLVPR+RVVKG+GKAI
Sbjct: 368 KRSKVGVHTASPGMVLTELLLSGSTIQNKQMFNIICELPETVARTLVPRMRVVKGTGKAI 427

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAWLRRGRWFDD+GRALY+AEADR+RNWAENRARFSFTDAMEMYTEN
Sbjct: 428 NYLTPPRILLALVTAWLRRGRWFDDEGRALYSAEADRLRNWAENRARFSFTDAMEMYTEN 487

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TW+SVFSLSVVCAFIILSST SN  PGT
Sbjct: 488 TWLSVFSLSVVCAFIILSSTSSN-LPGT 514

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357128420|ref|XP_003565871.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Brachypodium distachyon]

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/388 (83%), Positives = 358/388 (92%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMS+GVVL VGFQLSGGDSQMN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITG
Sbjct: 110 MMSSGVVLGVGFQLSGGDSQMNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITG 169

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGDRVVVASRS +SV  T++ELEEN++EG+  A    ++ L+ AK
Sbjct: 170 STRGLGKALAREFLLSGDRVVVASRSPQSVLQTISELEENIQEGLSVAKKKQREALLQAK 229

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V G +CDVC+P DV+KL NFAV+E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNL
Sbjct: 230 VVGTSCDVCKPEDVKKLVNFAVDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNL 289

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGS+LCTREAM VM++Q KGGH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL  ES
Sbjct: 290 VGSLLCTREAMDVMQNQEKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLMTES 349

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           KRSKVGVHTASPGMVLTDLLLSGS++QNKQMFNIICELPETVARTLVPR+RVVKGSGKAI
Sbjct: 350 KRSKVGVHTASPGMVLTDLLLSGSSLQNKQMFNIICELPETVARTLVPRMRVVKGSGKAI 409

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAW+RRGRWFD++GRA+YAAEADRIRNWAE+R RFSFTDAMEMYTEN
Sbjct: 410 NYLTPPRILLALVTAWVRRGRWFDEEGRAVYAAEADRIRNWAESRTRFSFTDAMEMYTEN 469

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILSS+G   FPGT
Sbjct: 470 TWVSVFSLSVVCAFIILSSSG-GPFPGT 496

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242055895|ref|XP_002457093.1| hypothetical protein SORBIDRAFT_03g001100 [Sorghum bicolor] gi|241929068|gb|EES02213.1| hypothetical protein SORBIDRAFT_03g001100 [Sorghum bicolor]

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/388 (83%), Positives = 355/388 (91%), Gaps = 1/388 (0%)

Query: 1   MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
           MMS+GVVL VGFQLSGGDSQMN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITG
Sbjct: 126 MMSSGVVLGVGFQLSGGDSQMNELIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITG 185

Query: 61  STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
           STRGLGKALAREFLLSGD VV+ SRS ESV  T+TELEEN++EG+  A    +K L HAK
Sbjct: 186 STRGLGKALAREFLLSGDHVVITSRSPESVLQTITELEENIQEGLSVAKKKERKILSHAK 245

Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V G ACDVC+P DV+KL NFA+NE GS+DIWINNAGTNKGF+PL+ F++++I QIVSTNL
Sbjct: 246 VVGTACDVCKPEDVKKLVNFAINELGSVDIWINNAGTNKGFRPLVTFSDDDITQIVSTNL 305

Query: 181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
           VGS+LCTREAM VM+ Q KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ Q SL KES
Sbjct: 306 VGSLLCTREAMNVMQYQEKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQGSLLKES 365

Query: 241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
           +RSKVGVHTASPGMVLTDLLLSGS+I+NKQMFN+ICELPETVARTLVPR+RVVKGSGKAI
Sbjct: 366 RRSKVGVHTASPGMVLTDLLLSGSSIRNKQMFNLICELPETVARTLVPRMRVVKGSGKAI 425

Query: 301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
           NYLTPPRILLALVTAW+RRGRWFDD+GRA+YAAEADRIRNWAE+RARFSFTDAMEMYTEN
Sbjct: 426 NYLTPPRILLALVTAWVRRGRWFDDEGRAVYAAEADRIRNWAESRARFSFTDAMEMYTEN 485

Query: 361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
           TWVSVFSLSVVCAFIILSS+G    PGT
Sbjct: 486 TWVSVFSLSVVCAFIILSSSG-GPLPGT 512

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	388
UNIPROTKB|Q5N800	504	NYC1 "Probable chlorophyll(ide	0.997	0.767	0.804	1.2e-168
TAIR|locus:2119330	496	NYC1 "NON-YELLOW COLORING 1" [	1.0	0.782	0.788	3.4e-164
UNIPROTKB|Q84ST4	343	NOL "Chlorophyll(ide) b reduct	0.636	0.720	0.423	1.3e-45
TAIR|locus:2175254	348	NOL "NYC1-like" [Arabidopsis t	0.587	0.655	0.438	5e-44
TIGR_CMR|CHY_1306	249	CHY_1306 "oxidoreductase, shor	0.5	0.779	0.298	1.8e-16
UNIPROTKB|F1RIX8	238	CBR4 "Uncharacterized protein"	0.345	0.563	0.323	1.2e-15
UNIPROTKB|Q8N4T8	237	CBR4 "Carbonyl reductase famil	0.391	0.641	0.339	4e-15
TIGR_CMR|CHY_1447	247	CHY_1447 "3-oxoacyl-(acyl-carr	0.474	0.744	0.282	8.8e-15
ZFIN|ZDB-GENE-040426-1796	237	cbr4 "carbonyl reductase 4" [D	0.381	0.624	0.309	2.7e-14
TIGR_CMR|DET_1277	247	DET_1277 "3-oxoacyl-acyl carri	0.368	0.578	0.287	4.1e-14

UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1640 (582.4 bits), Expect = 1.2e-168, P = 1.2e-168
 Identities = 312/388 (80%), Positives = 346/388 (89%)

Query:     1 MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
             MMS+GVVL VGFQLSGGDSQMN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITG
Sbjct:   118 MMSSGVVLGVGFQLSGGDSQMNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITG 177

Query:    61 STRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
             STRGLGKALAREFLLSGD              T+ ELEEN++EG+  A    ++ L+HAK
Sbjct:   178 STRGLGKALAREFLLSGDRVVIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAK 237

Query:   121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
             V G +CDVC+P DV+KL NFA +E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNL
Sbjct:   238 VVGTSCDVCKPEDVKKLVNFAKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNL 297

Query:   181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
             VGS+LCTREAM VM+ Q KGGH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL KES
Sbjct:   298 VGSLLCTREAMNVMQHQQKGGHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKES 357

Query:   241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
             +RSKVGVHTASPGMVLTDLLLSGS+++NKQMFN+ICELPETVARTLVPR+RVVKGSGKAI
Sbjct:   358 RRSKVGVHTASPGMVLTDLLLSGSSLRNKQMFNLICELPETVARTLVPRMRVVKGSGKAI 417

Query:   301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
             NYLTPPRILLALVTAW+RRGRWFD++GRA+YAAEADRIRNWAE+RARFSFTDAMEMYTEN
Sbjct:   418 NYLTPPRILLALVTAWVRRGRWFDEEGRAVYAAEADRIRNWAESRARFSFTDAMEMYTEN 477

Query:   361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
             TWVSVFSLSVVCAFIILSS+G    PGT
Sbjct:   478 TWVSVFSLSVVCAFIILSSSGG-PLPGT 504

GO:0009536 "plastid" evidence=IDA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0042170 "plastid membrane" evidence=RCA

TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1598 (567.6 bits), Expect = 3.4e-164, P = 3.4e-164
 Identities = 306/388 (78%), Positives = 337/388 (86%)

Query:     1 MMSTGVVLAVGFQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITG 60
             M STG +L +GFQLSGGDS MN+L+WYSWLGGIIIGTM GANMVLE+H +AGPRNVVITG
Sbjct:   109 MTSTGAILLIGFQLSGGDSSMNSLVWYSWLGGIIIGTMTGANMVLEDHYRAGPRNVVITG 168

Query:    61 STRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAK 120
             STRGLGKALAREFLLSGD             MTV ELE+NLKE M  A  S++K L  AK
Sbjct:   169 STRGLGKALAREFLLSGDRVIVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAK 228

Query:   121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
             V GIACDVC+P DV+KLSNFAV E GSI+IWINNAGTNKGF+PLL+FT E+I QIVSTNL
Sbjct:   229 VVGIACDVCKPEDVEKLSNFAVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNL 288

Query:   181 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
             +GSILCTR AM VM  Q  GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ   S+ KES
Sbjct:   289 IGSILCTRGAMDVMSRQHSGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKES 348

Query:   241 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAI 300
             +++ VG+HTASPGMVLT+LLLSGS+I+NKQMFNIICELPETVARTLVPR+RVVKGSGKA+
Sbjct:   349 QKTNVGLHTASPGMVLTELLLSGSSIKNKQMFNIICELPETVARTLVPRMRVVKGSGKAV 408

Query:   301 NYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTEN 360
             NYLTPPRILLA+VT+WLRRGRWFDDQGRALYAAEADR+RNWAENR R S TDAMEMYTEN
Sbjct:   409 NYLTPPRILLAIVTSWLRRGRWFDDQGRALYAAEADRLRNWAENRTRLSLTDAMEMYTEN 468

Query:   361 TWVSVFSLSVVCAFIILSSTGSNTFPGT 388
             TWVSVFSLSVVCAFIIL ST  ++FPGT
Sbjct:   469 TWVSVFSLSVVCAFIILQSTTPSSFPGT 496

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IC

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 113/267 (42%), Positives = 154/267 (57%)

Query:    32 GIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXX 91
             GI    + G   V        P NV+ITGST+G+G ALA+EFL +GD             
Sbjct:    52 GIRAEAVPGGGGVARRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVE 111

Query:    92 MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW 151
               VT+L               KK      V GI CDV E  DV+ L +FA ++   IDIW
Sbjct:   112 SAVTDL---------------KKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIW 156

Query:   152 INNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 210
             INNAG+N   +KPL++ ++E + ++++TN +G ++C REA+ +MR+QP+GGHIFN+DGAG
Sbjct:   157 INNAGSNAYSYKPLVETSDEALMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAG 216

Query:   211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG---VHTASPGMVLTDLLLSGSTIQ 267
             S G  TP  A YG+TK  +  L  SL  E + ++V    VH  SPGMV TDLL+SG+T +
Sbjct:   217 SDGRPTPRFAAYGATKRSVVHLTKSLQAELQMNEVNNVMVHNLSPGMVTTDLLMSGATTK 276

Query:   268 NKQMF-NIICELPETVARTLVPRIRVV 293
               + F NI+ E    VA  LVP IR +
Sbjct:   277 QAKFFINILAEPANVVADYLVPNIRAI 303

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 110/251 (43%), Positives = 146/251 (58%)

Query:    53 PRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSS 112
             P N++ITGST+G+G ALAREFL +GD               V  L+E   E         
Sbjct:    79 PYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE--------- 129

Query:   113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEE 171
                  H  V G  CDV E  DV++L  ++      IDIWINNAG+N   FKPL + ++E+
Sbjct:   130 -----H--VWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDED 182

Query:   172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL-- 229
             + ++V TN +G +LC REAM +M  Q +GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct:   183 LIEVVKTNTLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 242

Query:   230 --RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTL 286
               + LQA L  +  ++ V VH  SPGMV TDLL+SG+T +  + F N++ E  E VA  L
Sbjct:   243 LTKSLQAELQMQDVKNVV-VHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYL 301

Query:   287 VPRIRVVKGSG 297
             VP IR +  SG
Sbjct:   302 VPNIRAIPASG 312

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=IDA

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

TIGR_CMR|CHY_1306 CHY_1306 "oxidoreductase, short chain dehydrogenase/reductase family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 186 (70.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
 Identities = 62/208 (29%), Positives = 101/208 (48%)

Query:   100 NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 159
             N +EG  AA    +K L   +V  I CDV + AD++KL +     +G IDI +N AG N 
Sbjct:    39 NKEEGEKAALQLREKGL---EVYSIPCDVGKVADIKKLVSEVYGRYGRIDILVNCAGVNV 95

Query:   160 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT 219
               KP+ ++T E+   +V  NL G+     EA + M  Q K G I N+          P  
Sbjct:    96 R-KPIEEYTEEDWNYMVDINLKGTFFACIEAGKHMIAQ-KEGVIVNLASI-QAEEVLPER 152

Query:   220 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
              +Y +TK G++QL  +L  E  +  + V+  SP  + T+++     +Q+    N+I    
Sbjct:   153 GIYATTKGGVKQLTKALAVEWAKYNIRVNAVSPAFIKTEMV--EKVLQDPYWGNLI---- 206

Query:   280 ETVARTLVPRIRVVKGSGKAINYLTPPR 307
               + +T + R    +   +AI +L  P+
Sbjct:   207 --INKTPMRRPGTPEEVAEAILFLVSPK 232

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|F1RIX8 CBR4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 177 (67.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 44/136 (32%), Positives = 73/136 (53%)

Query:   124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 183
             ++CDV +  DVQ          G ++  +N AG N     L++ + E++   + TNL+GS
Sbjct:    53 LSCDVAKEQDVQSTFEEIEKNLGPVNFLVNAAGINSRDNLLVRTSTEDMLCQLQTNLLGS 112

Query:   184 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 243
             +L  + A++ M  Q +GG I N+ G+  G    P  +VY ++K GL     +L KE  + 
Sbjct:   113 MLTCKAAVKTMIKQ-QGGSIVNI-GSVVGLKGNPGQSVYSASKGGLVGFSRALAKEVAKK 170

Query:   244 KVGVHTASPGMVLTDL 259
             K+ V+  +PG V TD+
Sbjct:   171 KIRVNVVAPGFVHTDM 186

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0044598 "doxorubicin metabolic process" evidence=IEA

GO:0044597 "daunorubicin metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003955 "NAD(P)H dehydrogenase (quinone) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8N4T8 CBR4 "Carbonyl reductase family member 4" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
 Identities = 56/165 (33%), Positives = 83/165 (50%)

Query:    97 LEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 156
             +  NL EG  AA G    +  H      +CDV +  DVQ          G ++  +N AG
Sbjct:    32 IARNL-EGAKAAAGDLGGD--HL---AFSCDVAKEHDVQNTFEELEKHLGRVNFLVNAAG 85

Query:   157 TNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGS 214
              N+ G   L++   E++   + TNL+GS+L  + AMR M  Q +GG I N+    G  G+
Sbjct:    86 INRDGL--LVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQ-QGGSIVNVGSIVGLKGN 142

Query:   215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
             S    +VY ++K GL     +L KE  R K+ V+  +PG V TD+
Sbjct:   143 SGQ--SVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDM 185

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008753 "NADPH dehydrogenase (quinone) activity" evidence=ISS;IDA

GO:0048038 "quinone binding" evidence=ISS;IDA

GO:0070402 "NADPH binding" evidence=ISS;IDA

GO:0005759 "mitochondrial matrix" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0044597 "daunorubicin metabolic process" evidence=IMP

GO:0003955 "NAD(P)H dehydrogenase (quinone) activity" evidence=IDA

GO:0044598 "doxorubicin metabolic process" evidence=IMP

GO:0051289 "protein homotetramerization" evidence=IPI

TIGR_CMR|CHY_1447 CHY_1447 "3-oxoacyl-(acyl-carrier-protein) reductase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 193 (73.0 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 58/205 (28%), Positives = 103/205 (50%)

Query:    56 VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
             V++TG++RG+G+ +A  F L+G              +  ++L+E L+         SK  
Sbjct:     8 VLVTGASRGIGRKIAERFALAG---AKVGINYAHNDLLASQLKEELE---------SKG- 54

Query:   116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                A+V  +  DV +  +V+++    V  FG IDI +NNAG  K  K LL+ + ++ + +
Sbjct:    55 ---AEVLLVKGDVSQKEEVERIFKELVTTFGKIDIVVNNAGITKD-KLLLRMSYDDFDSV 110

Query:   176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQLQA 234
             + TNL  + L TREA ++M  Q + G I N+    G  G++    A Y ++K  +     
Sbjct:   111 IKTNLYSTFLVTREAAKIMLKQ-RFGRIINISSVVGIKGNAGQ--ANYAASKAAIIGFTK 167

Query:   235 SLFKESKRSKVGVHTASPGMVLTDL 259
             ++  E     + V+  +PG + TD+
Sbjct:   168 AVALELASRGITVNAVAPGYIKTDM 192

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

ZFIN|ZDB-GENE-040426-1796 cbr4 "carbonyl reductase 4" [Danio rerio (taxid:7955)]

 Score = 173 (66.0 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
 Identities = 47/152 (30%), Positives = 78/152 (51%)

Query:   108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 167
             A  S+ ++L      G++CDV +  +VQK         G++   +N AG N+    LL+ 
Sbjct:    38 AAQSTAQSLPGENHLGLSCDVSKEEEVQKAFETINKTCGTVGFLVNAAGINRDAL-LLRS 96

Query:   168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 227
              +E++  ++ TNL+GS+L  + A+R M     GG I N+ G+  G        VY ++K 
Sbjct:    97 KSEDMLSVLHTNLLGSMLTCKAAVRNMLSH--GGAIVNI-GSVVGVKGNAGQCVYSASKA 153

Query:   228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
             GL     SL KE     + V+  +PG++ TD+
Sbjct:   154 GLEGFTRSLAKEVASRNIRVNLVAPGLIHTDM 185

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

TIGR_CMR|DET_1277 DET_1277 "3-oxoacyl-acyl carrier protein reductase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 169 (64.5 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
 Identities = 42/146 (28%), Positives = 71/146 (48%)

Query:   124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 183
             +  DV + + V  L   A   FG +DI +NNAG  +  +  ++ + E+ + ++ TNL   
Sbjct:    59 VQADVSQSSGVDALFKAAQEAFGGVDILVNNAGITRD-QLTMRLSEEDWDSVIQTNLKSV 117

Query:   184 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 243
              LC++ A+R M    + G I N+     G    P  A Y + K G+     SL KE    
Sbjct:   118 FLCSKAALRQMLKN-RWGRIINLSSI-VGLKGNPGQANYAAAKAGILGFSCSLAKEVASR 175

Query:   244 KVGVHTASPGMVLTDLLLSGSTIQNK 269
              + V++ +PG + TD+  + S  Q +
Sbjct:   176 NITVNSIAPGFIETDMTAALSEEQRQ 201

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5N800	NYC1_ORYSJ	1, ., 1, ., 1, ., 2, 9, 4	0.8298	0.9974	0.7678	yes	no
Q93ZA0	NYC1_ARATH	1, ., 1, ., 1, ., 2, 9, 4	0.8144	1.0	0.7822	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.294	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	388
cd05233	234	cd05233, SDR_c, classical (c) SDRs	5e-49
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-34
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-34
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	8e-33
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-29
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-28
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-28
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-28
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-27
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-27
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	5e-27
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	6e-27
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-26
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	8e-26
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-25
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	4e-25
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	5e-25
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-24
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-24
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-24
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-24
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-24
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	6e-24
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	9e-24
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-23
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-23
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-22
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-22
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-22
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-22
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-22
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	4e-22
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-22
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-22
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	7e-22
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-21
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-21
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-21
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-21
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-21
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	5e-21
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	6e-21
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-20
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-20
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	4e-20
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	9e-20
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-19
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	3e-19
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-19
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-19
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-19
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-19
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-19
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	6e-19
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-18
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-18
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-18
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-18
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-18
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	4e-18
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-18
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-18
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	9e-18
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-17
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-17
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-17
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-17
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-17
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-17
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-17
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-17
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-17
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-17
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-17
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-16
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-16
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-16
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-16
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-16
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-16
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-16
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	5e-16
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	6e-16
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	7e-16
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	8e-16
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	9e-16
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-15
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-15
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-15
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-15
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-15
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	6e-15
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	7e-15
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-15
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	8e-15
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-14
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-14
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-14
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-14
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-14
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-14
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-14
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-14
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	8e-14
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	8e-14
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	9e-14
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-13
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-13
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-13
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-13
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-13
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-13
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-13
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	6e-13
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	6e-13
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	6e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	7e-13
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-13
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	8e-13
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-12
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-12
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-12
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-12
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-12
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	4e-12
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	6e-12
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	7e-12
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	8e-12
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	8e-12
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-11
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-11
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-11
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-11
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-11
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-11
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-11
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-11
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-11
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	8e-11
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	9e-11
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-10
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-10
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-10
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-10
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-10
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-10
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-10
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-10
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	4e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	4e-10
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-10
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-10
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	7e-10
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	7e-10
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	7e-10
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	7e-10
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	1e-09
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-09
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-09
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-09
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	5e-09
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	6e-09
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	7e-09
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	8e-09
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-09
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	9e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-08
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-08
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-08
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-08
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	4e-08
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	4e-08
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	4e-08
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-08
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-08
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	8e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	8e-08
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	1e-07
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-07
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-07
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-07
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-07
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-07
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-07
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-07
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-07
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-07
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-07
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	4e-07
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	8e-07
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-06
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	1e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-06
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-06
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-06
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	4e-06
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	5e-06
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	7e-06
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	9e-06
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	1e-05
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-05
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-05
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-05
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	3e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	4e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	6e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	6e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-04
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-04
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-04
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-04
pfam08659	181	pfam08659, KR, KR domain	5e-04
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	8e-04
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	8e-04
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	9e-04
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	0.001
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	0.001
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	0.002
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	0.002
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.002
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	0.003
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.003
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	0.004
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.004

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  165 bits (419), Expect = 5e-49
 Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 26/237 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++ G+G+A+AR     G +VV+A R+ E++     EL      G           
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALA----ELAAIEALG----------- 45

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  DV +  DV+ L   A+ EFG +DI +NNAG      PL + T+E+ +++
Sbjct: 46  ---GNAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIA-RPGPLEELTDEDWDRV 101

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL G  L TR A+  M+ Q  GG I N+          P  A Y ++K  L  L  S
Sbjct: 102 LDVNLTGVFLLTRAALPHMKKQ-GGGRIVNISSVAGLRPL-PGQAAYAASKAALEGLTRS 159

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-----NIICELPETVARTLV 287
           L  E     + V+  +PG+V T +L      + ++             PE VA  +V
Sbjct: 160 LALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVV 216

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  127 bits (321), Expect = 2e-34
 Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 20/208 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++ G+G+A+AR     G RVVVA+R SE       E  E L   +  AGG   
Sbjct: 6   KVALVTGASSGIGRAIARALAREGARVVVAARRSEE------EAAEALAAAIKEAGG--- 56

Query: 114 KNLVHAKVAGIACDV-CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                 + A +A DV  +   V+ L   A  EFG IDI +NNAG      PL + T E+ 
Sbjct: 57  -----GRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDW 111

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++++  NL+G+ L TR A+ +M+ Q     I N+  + +G    P  A Y ++K  L  L
Sbjct: 112 DRVIDVNLLGAFLLTRAALPLMKKQ----RIVNI-SSVAGLGGPPGQAAYAASKAALIGL 166

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             +L  E     + V+  +PG + T + 
Sbjct: 167 TKALALELAPRGIRVNAVAPGYIDTPMT 194

Length = 251

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  126 bits (318), Expect = 5e-34
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 23/222 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++ G+G+ +AR F   G RVVV  R+ E+      E+          AGG   
Sbjct: 6   KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL---------AGG--- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +A DV + ADV+     A+  FGS+DI +NNAGT     PLL     E +
Sbjct: 54  ------RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFD 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +I + N+    L T+ A+  MR +  GG I N+     G    P    Y ++K  +  L 
Sbjct: 108 RIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVASTA-GLRPRPGLGWYNASKGAVITLT 165

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQNKQMF 272
            +L  E    K+ V+  +P +V T L    +   T +N+  F
Sbjct: 166 KALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKF 207

Length = 251

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  123 bits (311), Expect = 8e-33
 Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 28/275 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG++ G+G  LA++    G  +++ +R        +  L + L+           
Sbjct: 7   KTALITGASSGIGAELAKQLARRGYNLILVARR----EDKLEALAKELE----------D 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           K  V  +V  I  D+ +P  +++L +      G ID+ +NNAG    F P L+ + +E E
Sbjct: 53  KTGVEVEV--IPADLSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPFLELSLDEEE 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  N++     T+  +  M ++   GHI N+ G+ +G   TP  AVY +TK  +    
Sbjct: 110 EMIQLNILALTRLTKAVLPGMVER-GAGHIINI-GSAAGLIPTPYMAVYSATKAFVLSFS 167

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP----- 288
            +L +E K + V V    PG   T+   +  +         +   PE VA   +      
Sbjct: 168 EALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKG 227

Query: 289 -RIRVVKGSGKAIN---YLTPPRILLALVTAWLRR 319
            R  +     KA+     L P  +   L     ++
Sbjct: 228 KREIIPGLPNKALALSFRLLPRSLREKLAGKIFKK 262

Length = 265

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  114 bits (287), Expect = 1e-29
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G+A+A      G  VV+   SSE+         E L   + A GG   
Sbjct: 6   KVALVTGASRGIGRAIAERLAAQGANVVINYASSEA-------GAEALVAEIGALGG--- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   +  DV +   V++  + A  EFG +DI +NNAG  +    L++   E+ +
Sbjct: 56  ------KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD-NLLMRMKEEDWD 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++ TNL G    T+   R M  Q + G I N+  +  G    P  A Y ++K G+    
Sbjct: 109 RVIDTNLTGVFNLTKAVARPMMKQ-RSGRIINI-SSVVGLMGNPGQANYAASKAGVIGFT 166

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGS 264
            SL +E     + V+  +PG + TD+  +  
Sbjct: 167 KSLARELASRGITVNAVAPGFIETDMTDALP 197

Length = 248

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (279), Expect = 2e-28
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            ++TG++ G+G+A+A      G +VV+A   + E+ +  + E++E               
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-------------- 53

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                    +  DV    DV+ L    V +FG IDI +NNAG +  F  +   T+EE ++
Sbjct: 54  ---GGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDR 109

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           ++  NL G +L TR A+  M  + K G I N+     G        +Y ++K  +     
Sbjct: 110 VIDVNLTGVMLLTRYALPYMIKR-KSGVIVNISSIW-GLIGASCEVLYSASKGAVNAFTK 167

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
           +L KE   S + V+  +PG + T++    S+   +    +  E+P
Sbjct: 168 ALAKELAPSGIRVNAVAPGAIDTEM---WSSFSEEDKEGLAEEIP 209

Length = 247

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  110 bits (278), Expect = 3e-28
 Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 20/204 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+  G+G  +A      G +VV+A  + E+       L++        AGG     
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK--------AGG----- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               K  G+A DV +   +    ++AV  FG +DI +NNAG  +   P+  F  E+ +++
Sbjct: 54  ----KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGI-QHVAPIEDFPTEKWKKM 108

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++  L G+ L T+ A+ +M+ Q  GG I NM  +  G   +   A Y S K GL  L   
Sbjct: 109 IAIMLDGAFLTTKAALPIMKAQ-GGGRIINM-ASVHGLVGSAGKAAYVSAKHGLIGLTKV 166

Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           +  E     V V+   PG V T L
Sbjct: 167 VALEGATHGVTVNAICPGYVDTPL 190

Length = 258

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  110 bits (277), Expect = 3e-28
 Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 22/211 (10%)

Query: 50  KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 109
               +  +ITG++ G+G+A AR    +G +VV+A+R  E     +  L + +  G     
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREE----RLEALADEIGAG----- 53

Query: 110 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 169
                         +A DV + A V+        EFG IDI +NNAG   G  PL +   
Sbjct: 54  ----------AALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG-DPLDEADL 102

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
           ++ ++++ TN+ G +  TR  +  M ++ K GHI N+ G+ +G    P  AVYG+TK  +
Sbjct: 103 DDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINL-GSIAGRYPYPGGAVYGATKAAV 160

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
           R     L +E   + + V   SPG+V T   
Sbjct: 161 RAFSLGLRQELAGTGIRVTVISPGLVETTEF 191

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  109 bits (274), Expect = 1e-27
 Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 23/205 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG + G+G ALA      G RV+  +R+ + +            E +      +   
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKL------------ESLGELLNDN--- 47

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                +  +  DV +   ++      +  FG ID+ +NNAG    F PL + + EE+ ++
Sbjct: 48  -----LEVLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYG-LFGPLEETSIEEVREL 101

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
              N+ G +  TR  + +MR Q   G I N+  + +G   TP    Y ++K  L  L  S
Sbjct: 102 FEVNVFGPLRVTRAFLPLMRKQ-GSGRIVNV-SSVAGLVPTPFLGPYCASKAALEALSES 159

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           L  E     + V    PG V T   
Sbjct: 160 LRLELAPFGIKVTIIEPGPVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  107 bits (271), Expect = 3e-27
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 20/222 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G+A+A      G +VV+   + E+      EL         AAGG   
Sbjct: 6   KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELR--------AAGG--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +  DV + A V+ L   AV  FG++DI +NNAG       L + + E+ +
Sbjct: 55  ------EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGIT-RDALLPRMSEEDWD 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL G+    R A+  M    + G I N+  + SG +  P    Y + K G+    
Sbjct: 108 RVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNI-SSVSGVTGNPGQTNYSAAKAGVIGFT 165

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 275
            +L  E     + V+  +PG + TD+          ++   I
Sbjct: 166 KALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEI 207

Length = 246

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 5e-27
 Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 28/206 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V++TG TRG+G  +AR FL +G  VVV  R                       G    
Sbjct: 7   RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR----------------APETVDG---- 46

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                      A DV +P  V  L +  V   G +D+ +NNAG +  +    + +    E
Sbjct: 47  -----RPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSP-YALAAEASPRFHE 100

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +IV  NL+  +L  + A  VM+ QP GG I N+ G+ SG   +P TA YG+ K GL  L 
Sbjct: 101 KIVELNLLAPLLVAQAANAVMQQQPGGGSIVNI-GSVSGRRPSPGTAAYGAAKAGLLNLT 159

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            SL  E    KV V+    G+V T+ 
Sbjct: 160 RSLAVEWA-PKVRVNAVVVGLVRTEQ 184

Length = 252

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  107 bits (269), Expect = 6e-27
 Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 30/212 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++ G+GKA+A     +G  VVV  RS E          E + E + A GG  K
Sbjct: 4   KVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDA-------AEEVVEEIKAVGG--K 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              V A       DV +  DV  L   A+ EFG++DI +NNAG         + T E+  
Sbjct: 55  AIAVQA-------DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDA-SSHEMTLEDWN 106

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKC 227
           +++  NL G  LC REA++  R     G I NM       SS       P    Y ++K 
Sbjct: 107 KVIDVNLTGQFLCAREAIKRFRKSKIKGKIINM-------SSVHEKIPWPGHVNYAASKG 159

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           G++ +  +L +E     + V+  +PG + T +
Sbjct: 160 GVKMMTKTLAQEYAPKGIRVNAIAPGAINTPI 191

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  104 bits (262), Expect = 4e-26
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 23/210 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           ++TG++RG+G+A+A+     G  VVV  + S  +    V E+E        AAGG     
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIE--------AAGG----- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               K   +  DV +P+ V +L + A   FG +DI +NNAG     KP+ + + EE +++
Sbjct: 54  ----KAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVML-KKPIAETSEEEFDRM 108

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            + N  G+    +EA + +RD   GG I N+  +    + TP    Y  +K  +      
Sbjct: 109 FTVNTKGAFFVLQEAAKRLRD---GGRIINI-SSSLTAAYTPNYGAYAGSKAAVEAFTRV 164

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGST 265
           L KE     + V+  +PG V TD+  +G T
Sbjct: 165 LAKELGGRGITVNAVAPGPVDTDMFYAGKT 194

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  103 bits (260), Expect = 8e-26
 Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 27/251 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG +RG+GKA+A      G  VV+  R S+       +    +   +   GG     
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSK-------DAAAEVAAEIEELGG----- 48

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               K   +  DV +P DV+++       FG +D+ ++NA     F+PL + T    +  
Sbjct: 49  ----KAVVVRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAG-AFRPLSELTPAHWDAK 103

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++TNL   + C ++A ++MR++  GG I  +   GS  +     AV G+ K  L  L   
Sbjct: 104 MNTNLKALVHCAQQAAKLMRER-GGGRIVAISSLGSIRALPNYLAV-GTAKAALEALVRY 161

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKG 295
           L  E     + V+  SPG++ TD L            N    L    A T   R+   + 
Sbjct: 162 LAVELGPRGIRVNAVSPGVIDTDAL--------AHFPNREDLLEAAAANTPAGRVGTPQD 213

Query: 296 SGKAINYLTPP 306
              A+ +L   
Sbjct: 214 VADAVGFLCSD 224

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 1e-25
 Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 22/203 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             V++TG   G+G+A+A  F  +G RV V   S  ++  T   L                
Sbjct: 12  LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-------------- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                AKV     DV +PA V+++ + AV  FG +D+ +NNAG       + + T E+ E
Sbjct: 58  -----AKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWE 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 232
           Q ++ NL G     R A+ +++    GG I  +   AG  G   P    Y ++K  +  L
Sbjct: 113 QTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG--YPGRTPYAASKWAVVGL 170

Query: 233 QASLFKESKRSKVGVHTASPGMV 255
             SL  E     + V+   PG+V
Sbjct: 171 VKSLAIELGPLGIRVNAILPGIV 193

Length = 264

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  101 bits (255), Expect = 4e-25
 Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 21/204 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++RG+G+A+A +    G +V++  RSSE       E  E + E + A G      
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE-------EGAEEVVEELKAYGV----- 48

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 174
               K  G+ CDV +  DV+ +      E G IDI +NNAG T      L++   E+ + 
Sbjct: 49  ----KALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNL--LMRMKEEDWDA 102

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           ++ TNL G    T+  +R+M  Q + G I N+  +  G       A Y ++K G+     
Sbjct: 103 VIDTNLTGVFNLTQAVLRIMIKQ-RSGRIINI-SSVVGLMGNAGQANYAASKAGVIGFTK 160

Query: 235 SLFKESKRSKVGVHTASPGMVLTD 258
           SL KE     + V+  +PG + TD
Sbjct: 161 SLAKELASRNITVNAVAPGFIDTD 184

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  102 bits (255), Expect = 5e-25
 Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 27/211 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG +RG+G A+AR    +G  V +   S+          EE  +E        +K
Sbjct: 9   KVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAP-------RAEEKAEE-------LAK 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           K  V  K     CDV     V+K       +FG IDI I NAG     KP L +T E+  
Sbjct: 55  KYGVKTKA--YKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVH-KPALDYTYEQWN 111

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST----PLT-AVYGSTKCG 228
           +++  NL G   C + A ++ + Q KG  I       +  S T    P   A Y ++K  
Sbjct: 112 KVIDVNLNGVFNCAQAAAKIFKKQGKGSLIIT-----ASMSGTIVNRPQPQAAYNASKAA 166

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           +  L  SL  E  +  + V++ SPG + TDL
Sbjct: 167 VIHLAKSLAVEWAKYFIRVNSISPGYIDTDL 197

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 1e-24
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 24/183 (13%)

Query: 50  KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 109
             G + VVITG++ G+G+A AR F   G +VV+ +R  E +     E+         AAG
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIR--------AAG 56

Query: 110 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 169
           G         +   +  DV +   VQ  ++ A  E G ID W+NNA     F P    T 
Sbjct: 57  G---------EALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTV-FGPFEDVTP 106

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKC 227
           EE  ++     +G +  T  A+R MR +   G I  +   GS  +  S PL + Y + K 
Sbjct: 107 EEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQV---GSALAYRSIPLQSAYCAAKH 162

Query: 228 GLR 230
            +R
Sbjct: 163 AIR 165

Length = 334

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  100 bits (250), Expect = 2e-24
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 20/206 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           ++V+ITG + G+GKALA+E +  G  V++ +RS   +   V E+E             ++
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIE-------------AE 48

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
            N    KV+ I+ D+ +  +V++    AV + G  D+ +N AG +         T EE E
Sbjct: 49  ANASGQKVSYISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISI-PGLFEDLTAEEFE 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 231
           + +  N  GS+      + +M++Q + GHI  +    S  +   +   + Y  +K  LR 
Sbjct: 108 RGMDVNYFGSLNVAHAVLPLMKEQ-RPGHIVFV---SSQAALVGIYGYSAYCPSKFALRG 163

Query: 232 LQASLFKESKRSKVGVHTASPGMVLT 257
           L  SL +E K   + V    P    T
Sbjct: 164 LAESLRQELKPYNIRVSVVYPPDTDT 189

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =   99 bits (250), Expect = 2e-24
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 22/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G+A+A      G +V V  RS E+   TV E++        A GG   
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIK--------ALGG--- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                   A +  DV +   V+ L      EFG +DI +NNAG T      L++ + E+ 
Sbjct: 50  ------NAAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGITRDNL--LMRMSEEDW 101

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + +++ NL G    T+  +R M  + + G I N+  +  G    P  A Y ++K G+   
Sbjct: 102 DAVINVNLTGVFNVTQAVIRAMIKR-RSGRIINI-SSVVGLIGNPGQANYAASKAGVIGF 159

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             SL KE     + V+  +PG + TD+
Sbjct: 160 TKSLAKELASRGITVNAVAPGFIDTDM 186

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 99.6 bits (249), Expect = 3e-24
 Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 21/206 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSS 112
           R  ++TG+ RGLG+A+A     +G  VVV  RS E      V  +E              
Sbjct: 7   RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL------------ 54

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +   +  DV + A ++     AV  FG IDI +NNAG  +  KPL   +++E 
Sbjct: 55  -----GRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED-KPLADMSDDEW 108

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++++  NL G     R  +  MR Q +GG I N+  + +G    P  + Y + K GL  L
Sbjct: 109 DEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNI-SSVAGLPGWPGRSNYAAAKAGLVGL 166

Query: 233 QASLFKESKRSKVGVHTASPGMVLTD 258
             +L +E     + V+  +PG + TD
Sbjct: 167 TKALARELAEYGITVNMVAPGDIDTD 192

Length = 249

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 99.1 bits (247), Expect = 6e-24
 Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 22/207 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+  G+G A A      G RVVVA     + +  V ++          AGG+    
Sbjct: 6   AIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI----------AGGA---- 51

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  DV +   V  L   AV EFG +D+ +NNAG       ++       +Q 
Sbjct: 52  ------LALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQT 105

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++ NL G+ LC R A   M  +  GG I N+  + +G S  P    YG++K  +R L  +
Sbjct: 106 MAINLRGTFLCCRHAAPRMIAR-GGGSIVNLS-SIAGQSGDPGYGAYGASKAAIRNLTRT 163

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLS 262
           L  E + + +  +  +PG++ T LLL+
Sbjct: 164 LAAELRHAGIRCNALAPGLIDTPLLLA 190

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 98.5 bits (246), Expect = 6e-24
 Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)

Query: 58  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 117
           ITG ++G+G A+A   L  G +V + +R  + +     EL                    
Sbjct: 11  ITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN------------------ 52

Query: 118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 177
              V G+A DV + ADVQ+  +  V  FG +D+ I NAG    F P+ + T EE   ++ 
Sbjct: 53  KGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGH-FAPVEELTPEEWRLVID 111

Query: 178 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQAS 235
           TNL G+    + A+  ++    GG+I N+    S   +      A Y ++K GL     +
Sbjct: 112 TNLTGAFYTIKAAVPALKRG--GGYIINI---SSLAGTNFFAGGAAYNASKFGLVGFSEA 166

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGST--------IQNKQMFNIICELPETVARTLV 287
              + ++  + V T  PG V T    +G T        IQ + +  ++ +L +   RTL 
Sbjct: 167 AMLDLRQYGIKVSTIMPGSVATH--FNGHTPSEKDAWKIQPEDIAQLVLDLLKMPPRTLP 224

Query: 288 PRIRV 292
            +I V
Sbjct: 225 SKIEV 229

Length = 237

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 98.7 bits (246), Expect = 9e-24
 Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 23/225 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG T+G+G A+  E    G  V   +R+ +       EL+E L E         +
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQK-------ELDECLTE-------WRE 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEI 172
           K     KV G  CDV   ++ Q+L +   + FG  ++I +NNAGTN   K    +T E+ 
Sbjct: 53  KGF---KVEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNI-RKEAKDYTEEDY 108

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
             I+STN   +   +R A  +++    G  +F    + +G  + P  A YG+TK  L QL
Sbjct: 109 SLIMSTNFEAAYHLSRLAHPLLKASGNGNIVFI--SSVAGVIAVPSGAPYGATKGALNQL 166

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 277
             SL  E  +  + V+  +P ++ T L+     IQ K+  + + E
Sbjct: 167 TRSLACEWAKDNIRVNAVAPWVIATPLV--EPVIQQKENLDKVIE 209

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 97.8 bits (244), Expect = 1e-23
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 20/193 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VVITG++ G+G+A A  F   G +VV+A+RS+E++     E+ E         GG     
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRE--------LGG----- 49

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV + A V++ ++ AV  FG ID W+NNAG    F      T EE  ++
Sbjct: 50  ----EAIAVVADVADAAQVERAADTAVERFGRIDTWVNNAGVAV-FGRFEDVTPEEFRRV 104

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
              N +G +  T  A+  +R +  GG + N+ G+  G  S PL A Y ++K  +R    S
Sbjct: 105 FDVNYLGHVYGTLAALPHLRRR-GGGALINV-GSLLGYRSAPLQAAYSASKHAVRGFTES 162

Query: 236 LFKESKRSKVGVH 248
           L  E       + 
Sbjct: 163 LRAELAHDGAPIS 175

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 97.4 bits (243), Expect = 2e-23
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 22/206 (10%)

Query: 55  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            V+ITG++ G+G+A AR F  +G ++++  R +E ++    EL                 
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFP------------ 49

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                KV  +  DV +   ++        EF  IDI +NNAG   G  P  +   E+ E 
Sbjct: 50  ----VKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWET 105

Query: 175 IVSTNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++ TN+ G +  TR  + +M  R+Q   GHI N+ G+ +G        VY +TK  +RQ 
Sbjct: 106 MIDTNVKGLLNVTRLILPIMIARNQ---GHIINL-GSIAGRYPYAGGNVYCATKAAVRQF 161

Query: 233 QASLFKESKRSKVGVHTASPGMVLTD 258
             +L K+   + + V    PG+V T+
Sbjct: 162 SLNLRKDLIGTGIRVTNIEPGLVETE 187

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 95.5 bits (238), Expect = 1e-22
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 20/207 (9%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            +  ++TG+  G+G A+AR    +G  VVV     E          +        AGGS 
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGD--------AGGS- 51

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                   V  +  DV +  ++  +   A  EFG +DI +NNAG      P+ +F  E+ 
Sbjct: 52  --------VIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQH-VAPIEEFPPEDW 102

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++I++  L  +    R A+  M+ Q   G I N+  +  G  ++P  + Y + K GL  L
Sbjct: 103 DRIIAVMLTSAFHTIRAALPHMKKQ-GWGRIINI-ASAHGLVASPFKSAYVAAKHGLIGL 160

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
              L  E     + V+   PG V T L
Sbjct: 161 TKVLALEVAEHGITVNAICPGYVRTPL 187

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 1e-22
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 30/215 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ RGLG A A     +G  V      +   R     LE        AAGG   
Sbjct: 8   KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALE--------AAGG--- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   IA D+ +PA VQ+  + A    G +D  +NNAG     K   +   +  +
Sbjct: 57  ------RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWD 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL-----TAVYGSTKCG 228
            +++ N+ G+ L  R A+  +RD    G I N+       S T L        Y ++K  
Sbjct: 110 AVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNL------ASDTALWGAPKLGAYVASKGA 162

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
           +  +  SL +E     + V+  +PG+  T+     
Sbjct: 163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYV 197

Length = 250

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 94.8 bits (236), Expect = 3e-22
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG+ +G+G+A+A      G  +V+A  + E          + + E    AG ++ 
Sbjct: 3   KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEE---AAKSTIQEISE----AGYNA- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A  A    DV +  DV+ L + AV +FGS D+ +NNAG      PLL  T E+++
Sbjct: 55  ----VAVGA----DVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAP-ITPLLTITEEDLK 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G +   + A R  +    GG I N   + +G    P    Y ++K  +R L 
Sbjct: 106 KVYAVNVFGVLFGIQAAARQFKKLGHGGKIINA-SSIAGVQGFPNLGAYSASKFAVRGLT 164

Query: 234 ASLFKESKRSKVGVHTASPGMVLT 257
            +  +E     + V+  +PG+V T
Sbjct: 165 QTAAQELAPKGITVNAYAPGIVKT 188

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 94.2 bits (235), Expect = 3e-22
 Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 21/208 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG+ RG+G+A+A      G  V+V     +    T   +E        AAGG   
Sbjct: 7   RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE--------AAGG--- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                 K      DV + A ++      V +FG +DI + NAG       P  +  +E+ 
Sbjct: 56  ------KARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLT--PFAEMDDEQW 107

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           E+++  NL G+ L T+ A+  +     GG I             P  A Y ++K GL   
Sbjct: 108 ERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGF 166

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             +L  E     + V++  PG V T + 
Sbjct: 167 TRALALELAARNITVNSVHPGGVDTPMA 194

Length = 251

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 93.7 bits (233), Expect = 3e-22
 Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 37/246 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++RG+G+A AR     G RV + +R    +     +  E                
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG--------------- 47

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                V G+A DV + ADV++  +     FG +D  +NNAG     KP+ + T EE   +
Sbjct: 48  -----VLGLAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGV-MKPVEELTPEEWRLV 101

Query: 176 VSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQL 232
           + TNL G+  C  +A   ++R    GG I N+   GS          A Y ++K GL  L
Sbjct: 102 LDTNLTGAFYCIHKAAPALLRRG--GGTIVNV---GSLAGKNAFKGGAAYNASKFGLLGL 156

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGST------IQNKQMFNIICELPETVARTL 286
             +   + + + + V    PG V T    +GS       +  + +   +    E  AR L
Sbjct: 157 SEAAMLDLREANIRVVNVMPGSVDTG--FAGSPEGQAWKLAPEDVAQAVLFALEMPARAL 214

Query: 287 VPRIRV 292
           V RI +
Sbjct: 215 VSRIEL 220

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 93.7 bits (233), Expect = 4e-22
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 22/234 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           +ITG   G+G+A AR F   G RVV+A            ++++        AG +    L
Sbjct: 8   IITGGASGIGEATARLFAKHGARVVIA------------DIDD-------DAGQAVAAEL 48

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP-LLQFTNEEIEQI 175
               ++ + CDV   ADV+   + AV  FG +DI  NNAG        +L+ + EE E++
Sbjct: 49  GDPDISFVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERV 108

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  N+ G+ L T+ A RVM    KG  +     AG  G   P    Y ++K  +  L  S
Sbjct: 109 LDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP--HAYTASKHAVLGLTRS 166

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 289
              E     + V+  SP  V T LL +G  ++++ +   +          L P 
Sbjct: 167 AATELGEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPE 220

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 94.0 bits (234), Expect = 4e-22
 Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 32/209 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VVITG + GLG+A+A  F     +VV+  RS E       E   ++ E +  AGG +   
Sbjct: 10  VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDE-------EEANDVAEEIKKAGGEAIA- 61

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQ 174
            V         DV   +DV  L   AV EFG++D+ INNAG  N    P  + + E+  +
Sbjct: 62  -VKG-------DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENA--VPSHEMSLEDWNK 111

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKCG 228
           +++TNL G+ L +REA++   +    G+I NM       SS       PL   Y ++K G
Sbjct: 112 VINTNLTGAFLGSREAIKYFVEHDIKGNIINM-------SSVHEQIPWPLFVHYAASKGG 164

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLT 257
           ++ +  +L  E     + V+   PG + T
Sbjct: 165 VKLMTETLAMEYAPKGIRVNNIGPGAINT 193

Length = 261

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.6 bits (233), Expect = 5e-22
 Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 43/267 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +N +ITG+ RG+G+A+A      G  V + +R+ E+++    E+E               
Sbjct: 8   KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-------------- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV     DV +  +V        NE GSIDI INNAG +K F   L+    E E
Sbjct: 54  ---YGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK-FGKFLELDPAEWE 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 232
           +I+  NL+G    TR  +  M ++ + G I N+   AG  G    +T+ Y ++K G+  L
Sbjct: 110 KIIQVNLMGVYYATRAVLPSMIER-QSGDIINISSTAGQKG--AAVTSAYSASKFGVLGL 166

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLS-GSTIQN--KQMFNIICELPETVARTLVPR 289
             SL +E ++  + V   +P  V TD+ +  G T  N  K M       PE +A  +V +
Sbjct: 167 TESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVM------QPEDLAEFIVAQ 220

Query: 290 IRVVKGSGKAINYLTPPRILLALVTAW 316
           +++              R  +     W
Sbjct: 221 LKL------------NKRTFIKSAGLW 235

Length = 239

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 7e-22
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 26/208 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           +  ++TG+ RG+G  + R+   SG   V++ +R  E  +  V +L               
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE------------ 48

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEE 171
                   V     DV + A ++  ++F   ++G +DI +NNAG   KGF        E+
Sbjct: 49  -----GLSVRFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTR-EQ 102

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
             + + TN  G++  T+  + +++ +   G I N+    SG  S  LT+ YG +K  L  
Sbjct: 103 ARETMKTNFFGTVDVTQALLPLLK-KSPAGRIVNV---SSGLGS--LTSAYGVSKAALNA 156

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L   L KE K + + V+   PG V TD+
Sbjct: 157 LTRILAKELKETGIKVNACCPGWVKTDM 184

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 96.5 bits (240), Expect = 1e-21
 Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V++TG+  G+G+A  + F  +GD+VVVA R+ E  R    E  ++L     A      
Sbjct: 6   RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERAR----ERADSLGPDHHA------ 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                     +A DV + A +++       EFG ID+ +NNAG T+      L  T EE 
Sbjct: 56  ----------LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEF 105

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            ++ + NL G+ L  REA+R+M +Q  G  I N+  +G+G  + P    Y ++K  +  L
Sbjct: 106 ARLQAINLTGAYLVAREALRLMIEQGHGAAIVNV-ASGAGLVALPKRTAYSASKAAVISL 164

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLL 261
             SL  E     + V+   PG V T ++ 
Sbjct: 165 TRSLACEWAAKGIRVNAVLPGYVRTQMVA 193

Length = 520

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 92.1 bits (229), Expect = 2e-21
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 24/205 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           VV+TGS RG+G+A+A      G  VVV A + +E +  T+  ++EN  EG+         
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGI--------- 59

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                   G+  DV      + L+   ++ +G  DI +NNAG    F P L   ++ I++
Sbjct: 60  --------GVLADVSTREGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDK 110

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            +ST+    I C++E  + MR+   GG I N+  + +G       ++YG+ K  +  L  
Sbjct: 111 HISTDFKSVIYCSQELAKEMRE---GGAIVNI-ASVAGIRPAYGLSIYGAMKAAVINLTK 166

Query: 235 SLFKESKRSKVGVHTASPGMVLTDL 259
            L  E    K+ V+  +PG V T L
Sbjct: 167 YLALELA-PKIRVNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 91.3 bits (227), Expect = 2e-21
 Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 24/215 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G  +AR     G RV +  R+ E +                A+GG   
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALS------------ASGG--- 45

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V  +  D  +P D + L +   + FG ID+ ++NAG       L + ++ E+E
Sbjct: 46  ------DVEAVPYDARDPEDARALVDALRDRFGRIDVLVHNAGIG-RPTTLREGSDAELE 98

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
              S N++     TR  +  +R+    G +  ++ + SG       A Y ++K  LR L 
Sbjct: 99  AHFSINVIAPAELTRALLPALREAGS-GRVVFLN-SLSGKRVLAGNAGYSASKFALRALA 156

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN 268
            +L +E     V V    PG V T +    + +  
Sbjct: 157 HALRQEGWDHGVRVSAVCPGFVDTPMAQGLTLVGA 191

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 91.5 bits (228), Expect = 3e-21
 Identities = 55/208 (26%), Positives = 83/208 (39%), Gaps = 38/208 (18%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
             ITG   G+GKA+A+ F   G  V +A R  E +     E+         +A G     
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEIS--------SATG----- 52

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN----------KGFKPLL 165
               +   I CDV +P  V+   +  + EFG IDI INNA  N           GFK   
Sbjct: 53  ---GRAHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFK--- 106

Query: 166 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 225
                    ++  +L G+   T+   + + +   GG I N+  A    + +P      + 
Sbjct: 107 --------TVIDIDLNGTFNTTKAVGKRLIEAKHGGSILNI-SATYAYTGSPFQVHSAAA 157

Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPG 253
           K G+  L  SL  E     + V+  +PG
Sbjct: 158 KAGVDALTRSLAVEWGPYGIRVNAIAPG 185

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 91.6 bits (227), Expect = 3e-21
 Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 19/208 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG++ G+GK +A  ++ +G +V +A+R  +++     E+            G   
Sbjct: 10  KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI---------GTSG--- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV  + CDV +   V  + +    E G IDI + NAG      P+L    EE +
Sbjct: 58  -----GKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGI-ITVTPMLDMPLEEFQ 111

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAVYGSTKCGLRQL 232
           ++ +TN+ G  L  + A + M  Q +GG I N         + P   + Y ++K  +  L
Sbjct: 112 RLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHL 171

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             ++  E    K+ V++ SPG +LT+L+
Sbjct: 172 TKAMAVELAPHKIRVNSVSPGYILTELV 199

Length = 253

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 91.3 bits (227), Expect = 4e-21
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 24/207 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G  +A     +G  +V+ SR+ E        +E   KEG+        
Sbjct: 6   KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIE---KEGV-------- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +     CDV +   ++        +FG IDI +NNAG  +   P  +F   E  
Sbjct: 55  ------EATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIR-RHPAEEFPEAEWR 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKCGLRQ 231
            ++  NL G    ++   R M  Q   G I N+    S  S    P    Y ++K G+  
Sbjct: 108 DVIDVNLNGVFFVSQAVARHMIKQ-GHGKIINI---CSLLSELGGPPVPAYAASKGGVAG 163

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTD 258
           L  +L  E  R  + V+  +PG   T+
Sbjct: 164 LTKALATEWARHGIQVNAIAPGYFATE 190

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 90.7 bits (226), Expect = 5e-21
 Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 22/206 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            V+TG+T G+GKA A E    G  V++ SR+ E +     E+EE                
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYG------------- 50

Query: 116 LVHAKVAGIACDVC-EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIE 173
            V  K   IA D        +++          I I +NN G +    +  L+   +E++
Sbjct: 51  -VETKT--IAADFSAGDDIYERIEKELEGL--DIGILVNNVGISHSIPEYFLETPEDELQ 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            I++ N++ ++  TR  +  M  + KG  I N+  + +G   TPL A Y ++K  L    
Sbjct: 106 DIINVNVMATLKMTRLILPGMVKRKKGA-IVNI-SSFAGLIPTPLLATYSASKAFLDFFS 163

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L++E K   + V +  P +V T +
Sbjct: 164 RALYEEYKSQGIDVQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 91.3 bits (227), Expect = 6e-21
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 23/209 (11%)

Query: 58  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 117
           ITG++RG G+A     L  GDRVV  +R +     T+ +L E   +              
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTA----TLADLAEKYGD-------------- 49

Query: 118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 177
             ++  +A DV + A V      AV  FG +DI +NNAG    F  + + T  E    + 
Sbjct: 50  --RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGL-FGMIEEVTESEARAQID 106

Query: 178 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 237
           TN  G++  T+  +  +R+Q + GHI  +   G G S+ P++ +Y ++K  L  +  +L 
Sbjct: 107 TNFFGALWVTQAVLPYLREQ-RSGHIIQISSIG-GISAFPMSGIYHASKWALEGMSEALA 164

Query: 238 KESKRSKVGVHTASPGMVLTDLLLSGSTI 266
           +E     + V    PG   TD   + +  
Sbjct: 165 QEVAEFGIKVTLVEPGGYSTDWAGTSAKR 193

Length = 275

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 90.2 bits (224), Expect = 1e-20
 Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 24/212 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG TRG+G+A+A  FL  G +V V   S+E                      +  
Sbjct: 8   KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE----------------------NEA 45

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           K L    V  I CDV     V+K       EFG +D+ +NNAG      P  +F  E+  
Sbjct: 46  KELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMY-LMPFEEFDEEKYN 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL G+I  T E + +++   K G I N+      G++   T  Y  TK G+  L 
Sbjct: 105 KMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILT 163

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
             L  E  +  + V+  +PG V TD+ LSG +
Sbjct: 164 RRLAFELGKYGIRVNAVAPGWVETDMTLSGKS 195

Length = 255

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 90.1 bits (224), Expect = 1e-20
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 17/154 (11%)

Query: 54  RNVVITGST-RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           + V++T +   G+G A AR  L  G RVV++      +  T  EL   L  G        
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLG-------- 69

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +V  + CDV   A V  L + AV   G +D+ +NNAG   G  P++  T++E 
Sbjct: 70  -------RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLG-GQTPVVDMTDDEW 121

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
            +++   L G+   TR A+R MR +  GG I N 
Sbjct: 122 SRVLDVTLTGTFRATRAALRYMRARGHGGVIVNN 155

Length = 262

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 91.8 bits (228), Expect = 3e-20
 Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 24/205 (11%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           PR V ITG  RG+G+A+A  F  +GDR+++  R +E          + L E   A G   
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGA--------KKLAE---ALGD-- 315

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
            ++L       +  D+ + A V+         +G +D+ +NNAG  + FKP L+ + E+ 
Sbjct: 316 -EHLS------VQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDF 368

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            ++   NL G+  C R A R+M    +GG I N+ G+ +   + P    Y ++K  +  L
Sbjct: 369 TRVYDVNLSGAFACARAAARLMS---QGGVIVNL-GSIASLLALPPRNAYCASKAAVTML 424

Query: 233 QASLFKESKRSKVGVHTASPGMVLT 257
             SL  E   + + V+T +PG + T
Sbjct: 425 SRSLACEWAPAGIRVNTVAPGYIET 449

Length = 520

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 88.1 bits (219), Expect = 4e-20
 Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 41/262 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +++TG++RG+G+ALA E L  G    VV+ +RS E ++    EL   L+           
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLR----------- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V  +  D+ + A V++L        G  D+ INNAG+      +     +E++
Sbjct: 51  -------VTTVKADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQ 103

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 231
           +    NL   +  T   +R  + +     + N+    SG +  P     +Y S+K     
Sbjct: 104 KYFDLNLTSPVCLTSTLLRAFKKRGLKKTVVNVS---SGAAVNPFKGWGLYCSSKAARDM 160

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 291
               L  E     V V + +PG+V TD            M   I E   +       R R
Sbjct: 161 FFRVLAAEEP--DVRVLSYAPGVVDTD------------MQREIRE--TSADPETRSRFR 204

Query: 292 VVKGSGKAINYLTPPRILLALV 313
            +K  G+ ++       L  L+
Sbjct: 205 SLKEKGELLDPEQSAEKLANLL 226

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 87.4 bits (217), Expect = 9e-20
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 28/205 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+  G+G+A+A  +L  G RVV+A       R+   E+                
Sbjct: 7   KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--------------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEE 171
                     ++ DV     + ++   AV  FG IDI  NNA     F   P+L  + + 
Sbjct: 52  -----PAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAAL---FDMAPILDISRDS 103

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLR 230
            +++ + N+ G     +   R M +Q +GG I NM   AG  G    L + Y +TK  + 
Sbjct: 104 YDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--ALVSHYCATKAAVI 161

Query: 231 QLQASLFKESKRSKVGVHTASPGMV 255
               S      R  + V+  +PG+V
Sbjct: 162 SYTQSAALALIRHGINVNAIAPGVV 186

Length = 257

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 2e-19
 Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 21/205 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG   G+G+A A  F   G +VVVA R +     TV  + E        AGG +    
Sbjct: 11  LVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE--------AGGEA---- 58

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                  +ACDV   A+V+ L    +  +G +D   NNAG       L + +  E + I+
Sbjct: 59  -----LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIM 113

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
             N+ G  LC +  + +M  Q  GG I N    AG G    P  ++Y ++K  +  L  S
Sbjct: 114 GVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLGA--APKMSIYAASKHAVIGLTKS 170

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
              E  +  + V+   P ++ TD+ 
Sbjct: 171 AAIEYAKKGIRVNAVCPAVIDTDMF 195

Length = 253

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 86.1 bits (213), Expect = 3e-19
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 22/202 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITGS RG+G+A A+ ++  G RV +A  + E+ R T  E+                
Sbjct: 4   KTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPA------------- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     I+ DV + A + +     V+ +GSIDI +NNA       P++  T E  +
Sbjct: 51  -------ACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFD-LAPIVDITRESYD 102

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G++   +   R M  Q +GG I NM  + +G     L  VY +TK  +  L 
Sbjct: 103 RLFAINVSGTLFMMQAVARAMIAQGRGGKIINM-ASQAGRRGEALVGVYCATKAAVISLT 161

Query: 234 ASLFKESKRSKVGVHTASPGMV 255
            S      R  + V+  +PG+V
Sbjct: 162 QSAGLNLIRHGINVNAIAPGVV 183

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 85.8 bits (213), Expect = 3e-19
 Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 20/205 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++T ++ G+G A+AR     G RV + +R+         E  E     + A G    
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNR--------ENLERAASELRAGGAG-- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V  +  D+ +P D+ +L   A + FG +DI +NNAG      P  + T+E+  
Sbjct: 52  -------VLAVVADLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPP-GPFAELTDEDWL 103

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +     L+  I   R  +  M+++   G I N+  + +     P   +    + GL  L 
Sbjct: 104 EAFDLKLLSVIRIVRAVLPGMKER-GWGRIVNI-SSLTVKEPEPNLVLSNVARAGLIGLV 161

Query: 234 ASLFKESKRSKVGVHTASPGMVLTD 258
            +L +E     V V++  PG + T+
Sbjct: 162 KTLSRELAPDGVTVNSVLPGYIDTE 186

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 86.0 bits (213), Expect = 3e-19
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG+++G+G A+AREFL  G  V++ +R ++++     EL E   E          
Sbjct: 10  QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPER--------- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V G+A DV +  D + + ++  + +  + I +NNAG N   K  + +T +E  
Sbjct: 61  ------EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIR-KAAIDYTEDEWR 113

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            I  TNL  +   +R A  +++ Q     I N+ G+ SG +     A YG TK  L Q+ 
Sbjct: 114 GIFETNLFSAFELSRYAHPLLK-QHASSAIVNI-GSVSGLTHVRSGAPYGMTKAALLQMT 171

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L  E     + V+  +P  + T L
Sbjct: 172 RNLAVEWAEDGIRVNAVAPWYIRTPL 197

Length = 257

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 3e-19
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+  G+G+A A      G  VVVA  ++E       ++        +A GG++    
Sbjct: 10  IVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQI--------VADGGTA---- 57

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQ 174
           +  +V     DV +P   + +++  V+ FG ID  +NNA    G K   L+    +  ++
Sbjct: 58  IAVQV-----DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKK 112

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            +S NL G+++CTR   + M  +  GG I N     +   S      YG  K GL  L  
Sbjct: 113 FMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQSSTAAWLYSNF----YGLAKVGLNGLTQ 167

Query: 235 SLFKESKRSKVGVHTASPGMVLTD 258
            L +E     + V+  +PG + T+
Sbjct: 168 QLARELGGMNIRVNAIAPGPIDTE 191

Length = 250

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 85.9 bits (213), Expect = 4e-19
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 20/205 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGS RGLG  +AR    +G  V+V  R++ ++   V  L         AAGG++ 
Sbjct: 12  QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR--------AAGGAA- 62

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +A D+ +   V         E G +DI +NN G  +  +PL +  +  I 
Sbjct: 63  --------EALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGA-RDRRPLAELDDAAIR 113

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++ T+LV  IL +R A + M+ +   G I  +    +G  +    AVY + K GL  L 
Sbjct: 114 ALLETDLVAPILLSRLAAQRMK-RQGYGRIIAITSI-AGQVARAGDAVYPAAKQGLTGLM 171

Query: 234 ASLFKESKRSKVGVHTASPGMVLTD 258
            +L  E     +  +  +PG   T+
Sbjct: 172 RALAAEFGPHGITSNAIAPGYFATE 196

Length = 256

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 85.1 bits (211), Expect = 4e-19
 Identities = 69/268 (25%), Positives = 108/268 (40%), Gaps = 35/268 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG++ G+G+ALAREF  +G  V +A+R ++ +     EL                  
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLN------PNPS------ 48

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQ 174
                V     DV +    Q +      E G +D+ I NAG  KG     L F  +   +
Sbjct: 49  -----VEVEILDVTDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSF--KAFRE 101

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            + TNL+G+      A+   R +   GH+  +  + +     P  A Y ++K  L  L  
Sbjct: 102 TIDTNLLGAAAILEAALPQFRAK-GRGHLVLI-SSVAALRGLPGAAAYSASKAALSSLAE 159

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVK 294
           SL  + K+  + V   +PG + T L     T     M  ++    E  A+ +   I   K
Sbjct: 160 SLRYDVKKRGIRVTVINPGFIDTPL-----TANMFTMPFLMS--VEQAAKRIYKAI---K 209

Query: 295 GSGKAINY---LTPPRILLALVTAWLRR 319
                  +   L  P  LL L+   LRR
Sbjct: 210 KGAAEPTFPWRLAVPLRLLKLLPERLRR 237

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 85.3 bits (211), Expect = 6e-19
 Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 22/206 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG+T G+G A+AR     G RV V +R  E +  TV EL E    G         
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELRE---AG--------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +  G  CDV    +++ L   AV  +G ID+ +NNAG + G     +  +E   
Sbjct: 52  -----VEADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGG-GATAELADELWL 105

Query: 174 QIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            +V TNL G    T+E ++   M ++   G I N+   G G       A Y ++K G+  
Sbjct: 106 DVVETNLTGVFRVTKEVLKAGGMLERGT-GRIINIASTG-GKQGVVHAAPYSASKHGVVG 163

Query: 232 LQASLFKESKRSKVGVHTASPGMVLT 257
              +L  E  R+ + V+   PG V T
Sbjct: 164 FTKALGLELARTGITVNAVCPGFVET 189

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 87.3 bits (217), Expect = 1e-18
 Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 19/203 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VV+TG+  G+G+  A  F   G  VV +     +   T   +         AAG      
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIR--------AAGAV---- 365

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
             HA       DV +   ++  + +   E G  DI +NNAG        L  + E+ +++
Sbjct: 366 -AHAYR----VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMA-GGFLDTSAEDWDRV 419

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL G I   R   R M ++  GGHI N+  A +   S  L A Y ++K  +  L   
Sbjct: 420 LDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPA-YATSKAAVLMLSEC 478

Query: 236 LFKESKRSKVGVHTASPGMVLTD 258
           L  E   + +GV    PG V T+
Sbjct: 479 LRAELAAAGIGVTAICPGFVDTN 501

Length = 582

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 84.6 bits (209), Expect = 1e-18
 Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 19/204 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           V+TG+  G+GK +A E   +G  V +A  + +       E+          AGG      
Sbjct: 11  VVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEIN--------KAGG------ 56

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              K  G+A DV     V    +     FGS+DI ++NAG  +   P+  ++  + +++ 
Sbjct: 57  ---KAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGI-QIVNPIENYSFADWKKMQ 112

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + ++ G+ L T+ A++ M    +GG +  M G+     ++PL + Y + K GL  L   L
Sbjct: 113 AIHVDGAFLTTKAALKHMYKDDRGGVVIYM-GSVHSHEASPLKSAYVTAKHGLLGLARVL 171

Query: 237 FKESKRSKVGVHTASPGMVLTDLL 260
            KE  +  V  H   PG V T L+
Sbjct: 172 AKEGAKHNVRSHVVCPGFVRTPLV 195

Length = 262

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 2e-18
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 21/209 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G A+AR     G  V V    S +         + L   + AAGG      
Sbjct: 9   IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAA-------ADELVAEIEAAGG------ 55

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              +   +  DV + A V +L + A   FG ID+ +NNAG       +  F  E+ ++ +
Sbjct: 56  ---RAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGV-MPLGTIADFDLEDFDRTI 111

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           +TNL G+ +  REA R +     GG I N+          P    Y ++K  +  L   L
Sbjct: 112 ATNLRGAFVVLREAARHLGQ---GGRIINLS-TSVIALPLPGYGPYAASKAAVEGLVHVL 167

Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGST 265
             E +   + V+  +PG V T+L  +G +
Sbjct: 168 ANELRGRGITVNAVAPGPVATELFFNGKS 196

Length = 245

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 83.5 bits (207), Expect = 2e-18
 Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 17/146 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            V+ G  + LG  L       G RV VA  +SE       E+     EG           
Sbjct: 5   AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG----------- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                  G   D      V  LS      FG +D+ + NAG  K    +  F   + ++ 
Sbjct: 54  ----MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKA-AFITDFQLGDFDRS 108

Query: 176 VSTNLVGSILCTREAMRVM-RDQPKG 200
           +  NLVG  LC RE  R+M RD  +G
Sbjct: 109 LQVNLVGYFLCAREFSRLMIRDGIQG 134

Length = 259

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 83.1 bits (206), Expect = 2e-18
 Identities = 64/240 (26%), Positives = 95/240 (39%), Gaps = 26/240 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG   G+G A A+  L  G +V +  R +E+      EL+    +          
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDR-NENPGAA-AELQAINPKV--------- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-- 171
                 K   + CDV     +      A+ +FG +DI INNAG     K  L        
Sbjct: 50  ------KATFVQCDVTSWEQLAAAFKKAIEKFGRVDILINNAGILDE-KSYLFAGKLPPP 102

Query: 172 IEQIVSTNLVGSILCTREAMRVMR--DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
            E+ +  NL G I  T  A+  M      KGG I N+     G    P   VY ++K G+
Sbjct: 103 WEKTIDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGSVA-GLYPAPQFPVYSASKHGV 161

Query: 230 RQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICELPETVARTLV 287
                SL    + ++ V V+   PG   T  LL     +  +M      + PE VA+ +V
Sbjct: 162 VGFTRSLADLLEYKTGVRVNAICPGFTNTP-LLPDLVAKEAEMLPSAPTQSPEVVAKAIV 220

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 82.6 bits (204), Expect = 4e-18
 Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 21/211 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG++ G+G A+AR  +  G +VV  +R  + +     E +         AG  + 
Sbjct: 7   RVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQS--------AGYPT- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +    CD+     +  + +    +   +D+ INNAG  +  +PLL    E  +
Sbjct: 58  -------LFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP-EPLLSGKTEGWK 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQ 231
           ++   N++   +CTREA + M+++    GHI N++  +G       +   Y +TK  +  
Sbjct: 110 EMFDVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTA 169

Query: 232 LQASLFKE--SKRSKVGVHTASPGMVLTDLL 260
           L   L +E    ++ +   + SPG+V T+  
Sbjct: 170 LTEGLRQELREAKTHIRATSISPGLVETEFA 200

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 79.9 bits (198), Expect = 8e-18
 Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 23/178 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           V+ITG T GLG ALAR     G R +V  SR               L   + A G     
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGP------APGAAELVAELEALG----- 51

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
               A+V   ACDV +   +  L        G +D  ++NAG      PL + T E  E+
Sbjct: 52  ----AEVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLD-DGPLEELTPERFER 106

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +++  + G+         + RD   G   F +  + +G   +P  A Y +    L  L
Sbjct: 107 VLAPKVTGAWNLH----ELTRDLDLG--AFVLFSSVAGVLGSPGQANYAAANAALDAL 158

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 81.7 bits (202), Expect = 8e-18
 Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 25/211 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG   G+G A+A+     G  VVVA    E     V E  +                
Sbjct: 4   ALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAE-KVAEAAQG--------------- 47

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +  G+ CDV   A VQ     AV EFG +DI ++NAG      P+ + + E+  + 
Sbjct: 48  --GPRALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATS-SPIAETSLEDWNRS 104

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL G  L +REA R+M+ Q  GG+I   + + +  +  P  A Y + K     L   
Sbjct: 105 MDINLTGHFLVSREAFRIMKSQGIGGNIV-FNASKNAVAPGPNAAAYSAAKAAEAHLARC 163

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTI 266
           L  E     + V+T +P     D +  GS I
Sbjct: 164 LALEGGEDGIRVNTVNP-----DAVFRGSKI 189

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 81.8 bits (202), Expect = 9e-18
 Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 24/199 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VV+TG+ +G+G+ +A      G RV++  RS         EL   +   ++AAG      
Sbjct: 7   VVVTGAAQGIGRGVAERLAGEGARVLLVDRS---------ELVHEVLAEILAAGD----- 52

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      D+   A  Q +   AV  FG +D+ INN G     KP   +  E+IE  
Sbjct: 53  ----AAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAE 108

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQA 234
           +  +L  ++ C R  +  M ++ + G I N+   A  G    P    Y + K G+  L A
Sbjct: 109 IRRSLFPTLWCCRAVLPHMLER-QQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTA 163

Query: 235 SLFKESKRSKVGVHTASPG 253
           SL  E  R  + V+  +PG
Sbjct: 164 SLAFEHARDGIRVNAVAPG 182

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 81.7 bits (202), Expect = 1e-17
 Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 36/221 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  VITG T  LG A+AR    +G +V    R+ E       E+         A GG + 
Sbjct: 6   KVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEIT--------ALGGRAI 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-------------G 160
                     +A DV + A +++     V +FG++DI IN AG N               
Sbjct: 58  ---------ALAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPET 108

Query: 161 FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT- 219
            +       E  E +   NL GS L ++   + M +Q KGG I N+    S  + +PLT 
Sbjct: 109 EQNFFDLDEEGWEFVFDLNLNGSFLPSQVFGKDMLEQ-KGGSIINI---SSMNAFSPLTK 164

Query: 220 -AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
              Y + K  +      L  E   + V V+  +PG  +T  
Sbjct: 165 VPAYSAAKAAVSNFTQWLAVEFATTGVRVNAIAPGFFVTPQ 205

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 33/243 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++TG++ G+G+ALA     +G R+++  R++E +      L               +
Sbjct: 6   KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-----------YPGR 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              V A       D+   A  + +   A  E G I++ INNAG N  F  L     E IE
Sbjct: 55  HRWVVA-------DLTSEAGREAVLARA-REMGGINVLINNAGVNH-FALLEDQDPEAIE 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
           ++++ NL   +  TR  + ++R QP       G  F     GS G   P  A Y ++K  
Sbjct: 106 RLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTF-----GSIG--YPGYASYCASKFA 158

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 288
           LR    +L +E   + V V   +P    T +        N+ + N + + PE VA  ++ 
Sbjct: 159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDD-PEDVAAAVLQ 217

Query: 289 RIR 291
            I 
Sbjct: 218 AIE 220

Length = 263

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 34/217 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + ++ITG+   +GKA  +  L +G R+++A  ++ ++     EL                
Sbjct: 3   KIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELT--------------- 47

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKG-FKPLLQFTNEE 171
            NL   +V  +  D+     +++L    + +FG IDI INNA  + K       +F  E+
Sbjct: 48  -NLYKNRVIALELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQ 106

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS------------GGSSTPLT 219
             ++++ NL G+ LC++  +++ + Q   G I N+    S              +     
Sbjct: 107 WNEVLNVNLGGAFLCSQAFIKLFKKQ-GKGSIINI---ASIYGVIAPDFRIYENTQMYSP 162

Query: 220 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 256
             Y   K G+  L   L K    + + V+  SPG +L
Sbjct: 163 VEYSVIKAGIIHLTKYLAKYYADTGIRVNAISPGGIL 199

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 81.0 bits (200), Expect = 2e-17
 Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 23/213 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG +RG+G+ + R F+ +G +VV  +R   + +   +EL         A  GS K  
Sbjct: 12  VIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNR-------AGPGSCKF- 63

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   + CDV +  D++ L +  V  FG ID  +NNAG +   +   + + +E   +
Sbjct: 64  --------VPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDL 115

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQA 234
           ++ NL+   L ++ A+  +R     G+I N+    GS G      A Y +TK  +  +  
Sbjct: 116 LNLNLISYFLASKYALPHLRKSQ--GNIINLSSLVGSIGQKQ--AAPYVATKGAITAMTK 171

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL--LSGST 265
           +L  +  R  V V+  SPG + T L   L+  T
Sbjct: 172 ALAVDESRYGVRVNCISPGNIWTPLWEELAAQT 204

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 21/205 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG++ G+G+ LA      G R+V+++R  E        LEE +K        S    
Sbjct: 6   VIITGASSGIGEELAYHLARLGARLVLSARREE-------RLEE-VK--------SECLE 49

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI-EQ 174
           L       +  D+ +  D +++   A+  FG +DI INNAG     + L   T+ ++  +
Sbjct: 50  LGAPSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTSIDVDRK 107

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           I+  N  G +  T+ A+  + ++   G I  +    +G    P    Y ++K  L+    
Sbjct: 108 IMEVNYFGPVALTKAALPHLIER-SQGSIVVVSSI-AGKIGVPFRTAYAASKHALQGFFD 165

Query: 235 SLFKESKRSKVGVHTASPGMVLTDL 259
           SL  E     + V    PG++ T++
Sbjct: 166 SLRAELSEPNISVTVVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 80.4 bits (199), Expect = 2e-17
 Identities = 68/267 (25%), Positives = 104/267 (38%), Gaps = 35/267 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG   G+G+ LA EF   G +VV+   + +    T   + +   +            
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGK------------ 49

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
            VH       CDV +  +V + +     E G + I INNAG   G K LL+  +EEIE+ 
Sbjct: 50  -VHYYK----CDVSKREEVYEAAKKIKKEVGDVTILINNAGVVSG-KKLLELPDEEIEKT 103

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQA 234
              N +     T+  +  M ++   GHI  +  A   G  S    A Y ++K        
Sbjct: 104 FEVNTLAHFWTTKAFLPDMLERNH-GHIVTI--ASVAGLISPAGLADYCASKAAAVGFHE 160

Query: 235 SLFKESKRSKV-GVHTA--SPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 291
           SL  E K     G+ T    P  + T  +  G       +  I+   PE VA  +V  I 
Sbjct: 161 SLRLELKAYGKPGIKTTLVCPYFINTG-MFQGVKTPRPLLAPIL--EPEYVAEKIVRAIL 217

Query: 292 VVKGSGKAINYLTPPRILLALVTAWLR 318
               + + + YL  P      +    R
Sbjct: 218 ----TNQQMLYL--PFY-AYFLPILKR 237

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 21/195 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
             + G+  GLG A+AR F   G  V +A+R          +LE  L + +  AGGS+K  
Sbjct: 2   AAVVGAGDGLGAAIARRFAAEGFSVALAARREA-------KLEALLVDIIRDAGGSAK-- 52

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  D  +  +V  L +    E G +++ + NAG N  F P+L+ T    E++
Sbjct: 53  -------AVPTDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWF-PILETTPRVFEKV 104

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
                 G  L  REA + M  + +G  IF   GA +        A +   K  LR L  S
Sbjct: 105 WEMAAFGGFLAAREAAKRMLARGRGTIIFT--GATASLRGRAGFAAFAGAKFALRALAQS 162

Query: 236 LFKESKRSKVGVHTA 250
           + +E      G+H A
Sbjct: 163 MARE--LGPKGIHVA 175

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 80.1 bits (198), Expect = 3e-17
 Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 25/204 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG  RGLG A AR  +  G +VV++    E  +    EL +                
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGD-------------AAR 54

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
             H        DV +      + + A   FG +D+ +NNAG   G   +   T EE  ++
Sbjct: 55  FFHL-------DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTG-GTVETTTLEEWRRL 106

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL G  L TR  +  M++   GG I NM     G    P  A Y ++K  +R L  S
Sbjct: 107 LDINLTGVFLGTRAVIPPMKEA-GGGSIINMSSI-EGLVGDPALAAYNASKGAVRGLTKS 164

Query: 236 LFKESKRSKVG--VHTASPGMVLT 257
              E      G  V++  PG + T
Sbjct: 165 AALECATQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 23/206 (11%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            +   ITG++ G G+ +    L  GDRV    R  +++        + L           
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVL-------- 53

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                         DV + A V+ + + A    G ID+ ++NAG    F    + ++ +I
Sbjct: 54  ------------QLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGL-FGAAEELSDAQI 100

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            + + TNL+GSI   R A+  +R Q  GG I  +   G G  + P  ++Y +TK G+   
Sbjct: 101 RRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEG-GQIAYPGFSLYHATKWGIEGF 158

Query: 233 QASLFKESKRSKVGVHTASPGMVLTD 258
             ++ +E     +      PG   T+
Sbjct: 159 VEAVAQEVAPFGIEFTIVEPGPARTN 184

Length = 276

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 80.2 bits (198), Expect = 3e-17
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 25/210 (11%)

Query: 57  VITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           ++TG++RG+G+A+A E    G D  +      +     V E+         AAG      
Sbjct: 5   IVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVL--------AAGR----- 51

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 174
               +      D+ E +D + L + A  +FG +D  +NNAG   +    LL  T +  ++
Sbjct: 52  ----RAIYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDR 107

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
           +++ NL G    T+   R M +QP         I  +    +   S P    Y  +K GL
Sbjct: 108 LIAINLRGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVS-PNRGEYCISKAGL 166

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
                 L        + VH   PG++ TD+
Sbjct: 167 SMATRLLAYRLADEGIAVHEIRPGLIHTDM 196

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 79.6 bits (197), Expect = 5e-17
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 47/222 (21%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           +VITG  +GLG+A+A      G ++ +   + E +   V E          A G      
Sbjct: 8   IVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECG--------ALGT----- 54

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---------------TNKG 160
               +V G A +V +  DV+        +FG ++  INNAG               T+K 
Sbjct: 55  ----EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSK- 109

Query: 161 FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG---AGSGGSSTP 217
              L QF     + ++  NL G  LC REA   M +    G I N+     AG+ G +  
Sbjct: 110 -MSLEQF-----QSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN- 162

Query: 218 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
               Y ++K G+  +  +  KE  R  + V   +PG++ T++
Sbjct: 163 ----YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200

Length = 253

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 78.6 bits (194), Expect = 1e-16
 Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 19/203 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG  +G+GK +A      G  V VA  + E+ + T  E+ +        AGG      
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ--------AGG------ 49

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
             A    +  DV +   V    + A  +FG  D+ +NNAG      P+L+ T EE++++ 
Sbjct: 50  -KAVAYKL--DVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVY 105

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + N+ G +   + A R  + Q  GG I N   + +G    P+ + Y STK  +R L  + 
Sbjct: 106 NVNVKGVLFGIQAAARQFKKQGHGGKIINA-ASIAGHEGNPILSAYSSTKFAVRGLTQTA 164

Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
            +E     + V+   PG+V T +
Sbjct: 165 AQELAPKGITVNAYCPGIVKTPM 187

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 1e-16
 Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 27/208 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TG   G+G A+A  F   G RV +  RS +   +    L  N K           
Sbjct: 16  KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAK----------- 64

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                    G+ CDV +   V+      ++ FG IDI +N+AG      P    + E+ +
Sbjct: 65  ---------GLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWD 114

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 231
           + +  NL GS L  +   R M     GG I N+    S      L     Y ++K G+  
Sbjct: 115 KTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNL---ASQAGVVALERHVAYCASKAGVVG 170

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           +   L  E     + V+  SP +VLT+L
Sbjct: 171 MTKVLALEWGPYGITVNAISPTVVLTEL 198

Length = 255

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 78.0 bits (192), Expect = 2e-16
 Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 19/211 (9%)

Query: 55  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
             ++TG   G+GKA+A     +G  VV+A   SE        +++         GG    
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA--------GG---- 48

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                +  G+ C+V    D++ +    V++FG I I +NNAG        +  T E+ E 
Sbjct: 49  -----QAIGLECNVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEW 103

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
               NL  +   ++     M+ +  GG I N+  + S  +     A YGS+K  +  +  
Sbjct: 104 AFKLNLFSAFRLSQLCAPHMQ-KAGGGAILNI-SSMSSENKNVRIAAYGSSKAAVNHMTR 161

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
           +L  +     + V+  +PG V TD L S  T
Sbjct: 162 NLAFDLGPKGIRVNAVAPGAVKTDALASVLT 192

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 28/209 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             V+ITG T G+G ALAR+FL +G+ V++  R            EE L E       +  
Sbjct: 6   NTVLITGGTSGIGLALARKFLEAGNTVIITGRR-----------EERLAE-AKKELPN-- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEI 172
              +H  V     DV +   V+ L+   ++E+ ++DI INNAG  +           ++ 
Sbjct: 52  ---IHTIV----LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKA 104

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLR 230
           +  + TNL+G I   +  +  ++ QP+   I N+    SG +  P+ A  VY +TK  L 
Sbjct: 105 DTEIDTNLIGPIRLIKAFLPHLKKQPEAT-IVNV---SSGLAFVPMAANPVYCATKAALH 160

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
               +L  + K + V V    P  V T+L
Sbjct: 161 SYTLALRHQLKDTGVEVVEIVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 80.7 bits (200), Expect = 2e-16
 Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 39/223 (17%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+  G+GKA A+     G  VV+A    E+      EL                  
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG---------------- 468

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +  G+ACDV + A VQ     A   FG +DI ++NAG      P+ + ++E+  + 
Sbjct: 469 --PDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG-IAISGPIEETSDEDWRRS 525

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHI-FNMD------GAGSGGSSTPLTAVYGSTKCG 228
              N  G  L  REA+R+M+ Q  GG I F         G   G         YG+ K  
Sbjct: 526 FDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGA--------YGAAKAA 577

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 271
              L   L  E     + V+      V  D ++ GS I   + 
Sbjct: 578 ELHLVRQLALELGPDGIRVN-----GVNPDAVVRGSGIWTGEW 615

Length = 681

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 36/212 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG++ G+G+ALA     +G ++V+A+R+   +     EL +                
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD---------------- 47

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--KGFKPLLQFTNEEIE 173
               +   +  DV +    ++L   AV  FG IDI +NNAG      F  L        E
Sbjct: 48  -HGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFE 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAV-----YGSTKC 227
           +++  N +G++ CT  A+      P   H+    G     SS   LT V     Y ++K 
Sbjct: 105 RVMRVNYLGAVYCTHAAL------P---HLKASRGQIVVVSSLAGLTGVPTRSGYAASKH 155

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
            L     SL  E     V V    PG V TD+
Sbjct: 156 ALHGFFDSLRIELADDGVAVTVVCPGFVATDI 187

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 77.2 bits (190), Expect = 3e-16
 Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 20/203 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++ G+G+A AR     G  V +A+R  + +     ELE        A GG      
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELE--------AEGG------ 52

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
             A V  +  DV +   V       V   G +DI +NNAG      P+      +  +++
Sbjct: 53  -KALV--LELDVTDEQQVDAAVERTVEALGRLDILVNNAGIML-LGPVEDADTTDWTRMI 108

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL+G +  T  A+     +   G I N+    +G  +   +AVY +TK G+      L
Sbjct: 109 DTNLLGLMYTTHAALPHHLLR-NKGTIVNISSV-AGRVAVRNSAVYNATKFGVNAFSEGL 166

Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
            +E     V V    PG V T+L
Sbjct: 167 RQEVTERGVRVVVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 76.7 bits (189), Expect = 5e-16
 Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE-LE---ENLKEGMMAAGGS 111
             +TG++RG+G+A+A     +G  VVVA++++        + L    E   E + AAGG 
Sbjct: 6   AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGG- 64

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                   +   I  DV +   V+ L    V++FG +DI +NNAG       +     + 
Sbjct: 65  --------QALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIW-LSLVEDTPAKR 115

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGL 229
            + +   NL G+ L ++ A+  M    + GHI N+       S  P      Y + K G+
Sbjct: 116 FDLMQRVNLRGTYLLSQAALPHMVKAGQ-GHILNI---SPPLSLRPARGDVAYAAGKAGM 171

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLT 257
            +L   L  E +R  + V++  P   + 
Sbjct: 172 SRLTLGLAAELRRHGIAVNSLWPSTAIE 199

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 76.6 bits (189), Expect = 6e-16
 Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ +G+G A+AR F   G  V +A   +         +  +       AG    
Sbjct: 8   KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD------VAG---- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A+V  +  DV + A V      A   FG +D+ +NNAG N  F   L  T+E+  
Sbjct: 58  -----ARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV-FADPLAMTDEDWR 111

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST-PLTAVYGSTKCGLRQL 232
           +  + +L G+    R  +  M ++   G I N+  A +      P    Y   K GL  L
Sbjct: 112 RCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNI--ASTHAFKIIPGCFPYPVAKHGLLGL 168

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L  E     V V+  +PG + T L
Sbjct: 169 TRALGIEYAARNVRVNAIAPGYIETQL 195

Length = 260

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 76.4 bits (188), Expect = 7e-16
 Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 19/214 (8%)

Query: 53  PRNV-VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 111
            R V +ITG++RG+G A A      G  V +    +        +  E + + +   GG 
Sbjct: 1   MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNR-------DAAEAVVQAIRRQGGE 53

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
           +           +A DV + ADV +L      E G +D  +NNAG  +    L Q     
Sbjct: 54  A---------LAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAAR 104

Query: 172 IEQIVSTNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
           + +I +TN+VGS LC REA++ M  R   +GG I N+    +   S      Y ++K  +
Sbjct: 105 LTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAI 164

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
             +   L KE     + V+   PG++ T++  SG
Sbjct: 165 DTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG 198

Length = 248

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 76.5 bits (189), Expect = 8e-16
 Identities = 60/224 (26%), Positives = 90/224 (40%), Gaps = 44/224 (19%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VVITG+  G+GK  ARE    G  V++A R+ E       E+++                
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETG------------- 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
             +AKV  I  D+   A V++ +   +  F  +DI INNAG      P  + T +  E  
Sbjct: 51  --NAKVEVIQLDLSSLASVRQFAEEFLARFPRLDILINNAGI---MAPPRRLTKDGFELQ 105

Query: 176 VSTNLVGSILCTREAMRVMRDQP------------KGGHI-FNMDGAGSGGSSTPLTAVY 222
            + N +G  L T   + V++               + G I FN     +    +P    Y
Sbjct: 106 FAVNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSP-YKAY 164

Query: 223 GSTK--CGL--RQLQASLFKESKRSKVGVHTAS--PGMVLTDLL 260
           G +K    L  R+L   L         GV   +  PG+V T+LL
Sbjct: 165 GQSKLANILFTRELARRL------EGTGVTVNALHPGVVRTELL 202

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 76.5 bits (189), Expect = 9e-16
 Identities = 80/299 (26%), Positives = 111/299 (37%), Gaps = 48/299 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V ITG  RG+G A AR     G RV +        + T  EL                
Sbjct: 6   KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---------------- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-- 171
                  V G   DV +PA      +    + G ID+ +NNAG      P+  F +E   
Sbjct: 50  -----GLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGV----MPVGPFLDEPDA 100

Query: 172 -IEQIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
              +I+  N+ G IL ++ A   M   P+G GH+ N+    +G    P  A Y ++K  +
Sbjct: 101 VTRRILDVNVYGVILGSKLAAPRMV--PRGRGHVVNVASL-AGKIPVPGMATYCASKHAV 157

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV-- 287
                +   E + + V V    P  V T+  L   T   K   N   E PE VA  +V  
Sbjct: 158 VGFTDAARLELRGTGVHVSVVLPSFVNTE--LIAGTGGAKGFKN--VE-PEDVAAAIVGT 212

Query: 288 -----PRIRVVK--GSGKAINYLTPPRILLALVTAWL--RRGRWFDDQGRALYAAEADR 337
                P +RV +  G       L P R+  AL       R     D   RA Y   A  
Sbjct: 213 VAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARAAYERRARG 271

Length = 273

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 52/291 (17%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
              VVITG++ G+G+A A  F   G R+V+A+R  E+++    E                
Sbjct: 7   GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA------------- 53

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK----PLLQFT 168
               + A+V  +  DV +   V+ L+  A +  G ID+W+NN G     +    P+    
Sbjct: 54  ----LGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPI---- 105

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
            E  EQ++ TNL+G +     A+ + + Q  G  I NM   G G ++ P  A Y ++K G
Sbjct: 106 -EAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFI-NMISLG-GFAAQPYAAAYSASKFG 162

Query: 229 LRQLQASLFKE-SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ------MFNIICELPET 281
           LR    +L  E +    + V    P  + T     G+    ++      +++     P  
Sbjct: 163 LRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYD-----PRR 217

Query: 282 VARTLV-----PRIRVVKGSGKAI----NYLTP---PRILLALVTAWLRRG 320
           VA+ +V     PR     G+   +    ++L P    R++  L   +L R 
Sbjct: 218 VAKAVVRLADRPRATTTVGAAARLARLAHFLAPGLTARLMGRLTRRYLARA 268

Length = 330

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 50/207 (24%), Positives = 76/207 (36%), Gaps = 38/207 (18%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           +++TG + G+G A+ +E L +G  VV A                      +  G    +N
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNAD---------------------IHGGDGQHEN 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--------KGFKPLLQF 167
                      DV    +V       + +FG ID  +NNAG N        K      + 
Sbjct: 51  YQFVP-----TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYEL 105

Query: 168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTK 226
                +++ + N  G  L ++   R M  Q   G I NM   AG  GS     + Y +TK
Sbjct: 106 NEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAGLEGSEG--QSCYAATK 162

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPG 253
             L     S  KE  +  + V   +PG
Sbjct: 163 AALNSFTRSWAKELGKHNIRVVGVAPG 189

Length = 266

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 74.6 bits (184), Expect = 2e-15
 Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 43/258 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           V+ITG++RG+G  L R+ L  G+  V+A+ R   +     TEL         AA G+S  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSA----ATEL---------AALGASHS 47

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS------IDIWINNAGTNKGFKPLLQFT 168
            L                DV      +            +D+ INNAG    + P  +  
Sbjct: 48  RL-----------HILELDVTDEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVD 96

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAV-YGSTK 226
           +E++ ++   N++G +L T+  + ++  +     I N+    GS G +T      Y ++K
Sbjct: 97  SEDLLEVFQVNVLGPLLLTQAFLPLLL-KGARAKIINISSRVGSIGDNTSGGWYSYRASK 155

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 286
             L  L  SL  E KR  + V +  PG V TD  + G   +NK         PE     L
Sbjct: 156 AALNMLTKSLAVELKRDGITVVSLHPGWVRTD--MGGPFAKNKGPIT-----PEESVAGL 208

Query: 287 VPRIRVVK--GSGKAINY 302
           +  I  +    SGK ++Y
Sbjct: 209 LKVIDNLNEEDSGKFLDY 226

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 74.5 bits (183), Expect = 3e-15
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           V+ITG++RG+G+A A      G  V +  +R + +   T   +         AAGG    
Sbjct: 5   VLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVR--------AAGG---- 52

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
               A V  +A DV   ADV  + +   + FG +D  +NNAG      PL       + +
Sbjct: 53  ---RACV--VAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRR 107

Query: 175 IVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +  TN++G+ LC REA R +      +GG I N+    S   S      Y  +K  +  L
Sbjct: 108 MFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTL 167

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
              L KE     V V+   PG++ T++  SG
Sbjct: 168 TLGLAKELGPHGVRVNAVRPGLIETEIHASG 198

Length = 248

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 3e-15
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 21/217 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G+A+A+     G  V+V+SR  +  +             ++AAGG ++   
Sbjct: 12  LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADA--------IVAAGGKAE--- 60

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                  +AC + E   +  L        G +DI +NNA  N  F  +L       ++ V
Sbjct: 61  ------ALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTV 114

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+ G    + EA ++M++Q  GG I N+  + +G S      +Y  TK  +  +  + 
Sbjct: 115 DVNIRGYFFMSVEAGKLMKEQ-GGGSIVNV-ASVNGVSPGDFQGIYSITKAAVISMTKAF 172

Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 273
            KE     + V+   PG  LTD   + +  +N  +  
Sbjct: 173 AKECAPFGIRVNALLPG--LTDTKFASALFKNDAILK 207

Length = 252

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 73.3 bits (180), Expect = 6e-15
 Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 23/234 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + + ITG+  G+G+  A  F  +G  V +               E+ L       G    
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDID-----------EDGLAALAAELGA--- 46

Query: 114 KNLVHAKVAGIACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
           +N+V   +     DV + A     L++FA    G +D   NNAG  +G  P         
Sbjct: 47  ENVVAGAL-----DVTDRAAWAAALADFAAATGGRLDALFNNAGVGRG-GPFEDVPLAAH 100

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +++V  N+ G +     A+  ++  P G  + N   + S     P  AVY +TK  +R L
Sbjct: 101 DRMVDINVKGVLNGAYAALPYLKATP-GARVINTASS-SAIYGQPDLAVYSATKFAVRGL 158

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 286
             +L  E  R  + V    P  V T +L  G T    +           VA+ +
Sbjct: 159 TEALDVEWARHGIRVADVWPWFVDTPILTKGETGAAPKKGLGRVLPVSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 73.6 bits (181), Expect = 7e-15
 Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 29/222 (13%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+  G G+ +AR F   G RVV+A  +++       ++ E                 
Sbjct: 9   IVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEA---------------- 52

Query: 117 VHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                  IA   DV + ADV+ +   A+++FG +DI +NNAG     KP+L+   EE ++
Sbjct: 53  ------AIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDR 106

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           + + N+    L  +  +  M +Q  GG I N+     G    P    Y ++K  +     
Sbjct: 107 VFAVNVKSIYLSAQALVPHMEEQ-GGGVIINIASTA-GLRPRPGLTWYNASKGWVVTATK 164

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFN 273
           ++  E     + V+   P    T LL   +   T +N+  F 
Sbjct: 165 AMAVELAPRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFR 206

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 73.3 bits (180), Expect = 7e-15
 Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            +  ++TG+ RG+G A+ARE L  G RV+    S         +  E             
Sbjct: 2   KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFE------------- 45

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
           +      +V     DV +  +  +       E G +DI +NNAG  +      + +++E 
Sbjct: 46  EYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRD-SVFKRMSHQEW 104

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
             +++TNL      T+     M +Q   G I N+    +G         Y + K G+   
Sbjct: 105 NDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV-NGLKGQFGQTNYSAAKAGMIGF 162

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L  E  R  + V+  +PG + T +
Sbjct: 163 TKALASEGARYGITVNCIAPGYIATPM 189

Length = 245

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 73.4 bits (181), Expect = 8e-15
 Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 34/211 (16%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           +ITG++ G+G+A A+ F   G +VVV +R          EL++ L   + A GG      
Sbjct: 10  IITGASSGIGRAAAKLFAREGAKVVVGARRQA-------ELDQ-LVAEIRAEGG------ 55

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              +   +A DV + A  + L   AV  FG +DI  NNAGT     P+ + + E   + +
Sbjct: 56  ---EAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETL 112

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--------PLTAVYGSTKCG 228
           +TNL  + L  +  +  M  +  G  IF         +ST        P  A Y ++K G
Sbjct: 113 ATNLTSAFLGAKHQIPAMLARGGGSLIF---------TSTFVGHTAGFPGMAAYAASKAG 163

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           L  L   L  E     + V+   PG   T +
Sbjct: 164 LIGLTQVLAAEYGAQGIRVNALLPGGTDTPM 194

Length = 254

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 24/199 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VV+TG+ +G+G+ +A      G RVV+  RS         EL   +   + AAGG     
Sbjct: 11  VVVTGAAQGIGRGVALRAAAEGARVVLVDRS---------ELVHEVAAELRAAGG----- 56

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  D+   A  Q     AV  FG ID+ INN G     KP  ++  E+IE  
Sbjct: 57  ----EALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAE 112

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQA 234
           +  +L  ++ C R  +  M  Q  GG I N+    + G +  P    Y + K G+  L A
Sbjct: 113 IRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRGINRVP----YSAAKGGVNALTA 167

Query: 235 SLFKESKRSKVGVHTASPG 253
           SL  E     + V+  +PG
Sbjct: 168 SLAFEYAEHGIRVNAVAPG 186

Length = 260

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 72.6 bits (178), Expect = 1e-14
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 23/203 (11%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++T ST G+G A+AR     G  VVV+SR  ++V   V  L+    EG+           
Sbjct: 14  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQ---GEGL----------- 59

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
               V G  C V +  D ++L   AVN  G +DI ++NA  N  F  +L  T E  ++I+
Sbjct: 60  ---SVTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKIL 116

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV--YGSTKCGLRQLQA 234
             N+  + L T+  +  M  +  G  +       S  +  P   +  Y  +K  L  L  
Sbjct: 117 DVNVKATALMTKAVVPEMEKRGGGSVVI----VSSVAAFHPFPGLGPYNVSKTALLGLTK 172

Query: 235 SLFKESKRSKVGVHTASPGMVLT 257
           +L  E     + V+  +PG++ T
Sbjct: 173 NLAPELAPRNIRVNCLAPGLIKT 195

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 72.8 bits (179), Expect = 2e-14
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 26/211 (12%)

Query: 55  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            V+ITG+  GLG+A+A  +   G R+ +A  + E    T+  L E        AGG    
Sbjct: 2   RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE--------AGG---- 49

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                      CDV + + +  L+     ++G ID+ +NNAG   G      F    +E 
Sbjct: 50  -----DGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGF----FEELSLED 100

Query: 175 ---IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
               ++ NL+G +   +  + + + Q K G I N+  + +G    P  + Y   K G+  
Sbjct: 101 WDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNI-ASMAGLMQGPAMSSYNVAKAGVVA 158

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLS 262
           L  +L  E    ++GVH   P    T+LL S
Sbjct: 159 LSETLLVELADDEIGVHVVCPSFFQTNLLDS 189

Length = 270

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V+ITG + GLG+A+A      G  V+V         M      + +  G+ AAGG   
Sbjct: 7   RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHP----MRGRAEADAVAAGIEAAGG--- 59

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K  G+A DV + A  +   +  V EFG +DI +NNAG         + + EE +
Sbjct: 60  ------KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATD-AAFAELSIEEWD 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++  NL G    T+ A+  M    +GG I N+  + +G         Y ++K GL  L 
Sbjct: 113 DVIDVNLDGFFNVTQAALPPMIRARRGGRIVNI-ASVAGVRGNRGQVNYAASKAGLIGLT 171

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L  E     + V+  +PG + T + 
Sbjct: 172 KTLANELAPRGITVNAVAPGAINTPMA 198

Length = 249

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 37/277 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            ++TGS+RG+GKA+A      G D  V  +RS ++   T  E+E        A G     
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE--------ALG----- 53

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                K   +  +V +   ++++      EFG +D+++NNA +    +P ++      + 
Sbjct: 54  ----RKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGV-LRPAMELEESHWDW 108

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            ++ N    + C +EA ++M ++  GG I ++   GS       T V G +K  L  L  
Sbjct: 109 TMNINAKALLFCAQEAAKLM-EKVGGGKIISLSSLGSIRYLENYTTV-GVSKAALEALTR 166

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVK 294
            L  E     + V+  S G V TD L        K   N    L +  A+T   R+   +
Sbjct: 167 YLAVELAPKGIAVNAVSGGAVDTDAL--------KHFPNREELLEDARAKTPAGRMVEPE 218

Query: 295 GSGKAINYLTPPRILLALVTAWLRRGR-WFDDQGRAL 330
               A+ +L  P        A + RG+    D GR+L
Sbjct: 219 DVANAVLFLCSPE-------ADMIRGQTIIVDGGRSL 248

Length = 250

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 37/221 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  VITG    LG A+A+E   +G +V +  R+ E     V E++        AAGG + 
Sbjct: 11  KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK--------AAGGEAL 62

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--------------K 159
                     +  DV +   +++     + +FG  DI IN AG N              +
Sbjct: 63  ---------AVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIE 113

Query: 160 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT 219
             K       E  E +   NL+G++L T+   + M  + KGG+I N+    S  + TPLT
Sbjct: 114 PTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINI---SSMNAFTPLT 169

Query: 220 AV--YGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 258
            V  Y + K  +      L     +  + V+  +PG  LT+
Sbjct: 170 KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE 210

Length = 278

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 23/211 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           VITG++ G+G+A A      G  V+     +E+V  TV +++ N        GG +K   
Sbjct: 10  VITGASTGIGQASAIALAQEGAYVLAVD-IAEAVSETVDKIKSN--------GGKAKAYH 60

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
           V         D+ +   V+  ++    +FG +D+  NNAG +     + ++  +  ++I+
Sbjct: 61  V---------DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIM 111

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + ++ G+ L T+  + +M +Q  GG I N   + SG ++    + Y + K  +     S+
Sbjct: 112 AVDMRGTFLMTKMLLPLMMEQ--GGSIIN-TSSFSGQAADLYRSGYNAAKGAVINFTKSI 168

Query: 237 FKESKRSKVGVHTASPGMVLTDLL--LSGST 265
             E  R  +  +  +PG + T L+  L+G++
Sbjct: 169 AIEYGRDGIRANAIAPGTIETPLVDKLTGTS 199

Length = 272

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 21/203 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG +RGLG  +A     +G RVV+++R +E +      LE        A G    
Sbjct: 13  KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLE--------ALG---- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     IA DV + AD+++L+   +  FG +DI +NNAG   G  P      E  +
Sbjct: 61  -----IDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWG-APAEDHPVEAWD 114

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPL--TAVYGSTKCGLR 230
           ++++ N+ G  L ++   +        G I N+   AG GG+   +  T  Y ++K  + 
Sbjct: 115 KVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVI 174

Query: 231 QLQASLFKESKRSKVGVHTASPG 253
               +L  E     + V+  +PG
Sbjct: 175 NFTRALAAEWGPHGIRVNAIAPG 197

Length = 259

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 71.7 bits (176), Expect = 3e-14
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 20/204 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           V+TG+ RGLG A+A  F  +G  V++A+R       T ++L+E + E + AAG   ++  
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAAR-------TESQLDE-VAEQIRAAG---RRAH 62

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
           V      +A D+  P     L+  AV  FG +DI +NN G      PLL  + +++    
Sbjct: 63  V------VAADLAHPEATAGLAGQAVEAFGRLDIVVNNVG-GTMPNPLLSTSTKDLADAF 115

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + N+  +   T  A+ +M +   GG + N+     G  +    A YG+ K  L      L
Sbjct: 116 TFNVATAHALTVAAVPLMLEHSGGGSVINISST-MGRLAGRGFAAYGTAKAALAHY-TRL 173

Query: 237 FKESKRSKVGVHTASPGMVLTDLL 260
                  ++ V+  +PG +LT  L
Sbjct: 174 AALDLCPRIRVNAIAPGSILTSAL 197

Length = 263

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 70.6 bits (173), Expect = 8e-14
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 18/203 (8%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TGST G+G  +AR    +G  +V+      +    V       K G+           
Sbjct: 6   LVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAA-KHGV----------- 53

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              KV     D+ +PA ++ +  +A  +FG +DI +NNAG  +   P+  F  E+ + I+
Sbjct: 54  ---KVLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGI-QHVAPIEDFPTEKWDAII 109

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + NL      TR A+  M+ Q   G I N+     G  ++   + Y + K G+  L   +
Sbjct: 110 ALNLSAVFHTTRLALPHMKKQ-GWGRIINIASV-HGLVASANKSAYVAAKHGVVGLTKVV 167

Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
             E+  + V  +   PG VLT L
Sbjct: 168 ALETAGTGVTCNAICPGWVLTPL 190

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 8e-14
 Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 25/202 (12%)

Query: 58  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 117
           ITG + G G+ALA+  L +G RVV   RS  +         +                  
Sbjct: 9   ITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDR----------------- 51

Query: 118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIV 176
                    DV +   +  +   A   FG ID+ +NNAG   G +  ++ +   E+ +  
Sbjct: 52  ---ALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGY--GHEGAIEESPLAEMRRQF 106

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+ G++  T+  +  MR + + GHI N+   G G  + P    Y  +K  L  +  SL
Sbjct: 107 EVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSMG-GLITMPGIGYYCGSKFALEGISESL 164

Query: 237 FKESKRSKVGVHTASPGMVLTD 258
            KE     + V    PG   TD
Sbjct: 165 AKEVAPFGIHVTAVEPGSFRTD 186

Length = 277

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 70.1 bits (172), Expect = 9e-14
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 18/204 (8%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITGS+ G+G   A  F   G R+ +  R +E        LEE  +   + AG S KK 
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAE-------RLEETRQS-CLQAGVSEKKI 57

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
           L+      +  D+ E     ++ +  + +FG +DI +NNAG             EE +++
Sbjct: 58  LL------VVADLTEEEGQDRIISTTLAKFGRLDILVNNAGIL-AKGGGEDQDIEEYDKV 110

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++ NL   I  T+ A+  +      G I N+    +GG S P    Y  +K  L Q    
Sbjct: 111 MNLNLRAVIYLTKLAVPHLIKTK--GEIVNVSSV-AGGRSFPGVLYYCISKAALDQFTRC 167

Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
              E     V V++ SPG+++T  
Sbjct: 168 TALELAPKGVRVNSVSPGVIVTGF 191

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 70.0 bits (171), Expect = 1e-13
 Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 22/208 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG   G+G A  R F   G +V V   + E+      ++           GG+++
Sbjct: 4   KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA--------KGGNAQ 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                      ACD+ +   V      A    G +D+ +NNAG +K F P  +      E
Sbjct: 56  ---------AFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWE 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++++ NL G++      +  M ++   G I N+   A   GSS    AVY + K GL   
Sbjct: 106 RLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARVGSSG--EAVYAACKGGLVAF 162

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             ++ +E  R  + V+   PG   T LL
Sbjct: 163 SKTMAREHARHGITVNVVCPGPTDTALL 190

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 69.8 bits (171), Expect = 1e-13
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           ++ITG   G+G ALA+ FL  G+ V++  R+           EE L E          K 
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRN-----------EERLAEA---------KA 47

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE---- 171
                +    CDV +    ++L  +   E+ ++++ INNAG  +        T  E    
Sbjct: 48  ENPE-IHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNE----DLTGAEDLLD 102

Query: 172 -IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCG 228
             EQ ++TNL+  I  T   +  +  QP+   I N+    SG +  P+  T VY +TK  
Sbjct: 103 DAEQEIATNLLAPIRLTALLLPHLLRQPE-ATIINVS---SGLAFVPMASTPVYCATKAA 158

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS 264
           +     +L ++ K + V V   +P +V T    + +
Sbjct: 159 IHSYTLALREQLKDTSVEVIELAPPLVDTTEGNTQA 194

Length = 245

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 69.8 bits (171), Expect = 1e-13
 Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 18/200 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           V+ G  + LG+ L      +G  V VA  +SE+      E+     E             
Sbjct: 6   VVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGE------------- 52

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              K  G   D      V  LS      F  +D+ + +AG  K    +  F   + ++ +
Sbjct: 53  ---KAYGFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKS-AKITDFELGDFDRSL 108

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             NLVG  LC RE  ++M      G I  ++ + SG   +   + Y + K G   L  SL
Sbjct: 109 QVNLVGYFLCAREFSKLMIRDGIQGRIIQIN-SKSGKVGSKHNSGYSAAKFGGVGLTQSL 167

Query: 237 FKESKRSKVGVHTASPGMVL 256
             +     + V++   G +L
Sbjct: 168 ALDLAEHGITVNSLMLGNLL 187

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 26/206 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV------ASRSSESVRMTVTELEENLKEGMMA 107
           R V++TG+  GLG+A A  F   G +VVV         S +S       ++E    G  A
Sbjct: 6   RVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA 65

Query: 108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 167
                               V    D +K+   A++ FG +DI +NNAG  +  +   + 
Sbjct: 66  VANYD--------------SV---EDGEKIVKTAIDAFGRVDILVNNAGILRD-RSFAKM 107

Query: 168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 227
           + E+ + ++  +L GS   TR A   MR Q  G  I     AG  G+     A Y + K 
Sbjct: 108 SEEDWDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFG--QANYSAAKL 165

Query: 228 GLRQLQASLFKESKRSKVGVHTASPG 253
           GL  L  +L  E  +  +  +T +P 
Sbjct: 166 GLLGLSNTLAIEGAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 69.3 bits (169), Expect = 2e-13
 Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 46/240 (19%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG  +G+GKA+       G +VV+   SS+       E  ENL   +   G       
Sbjct: 10  IVTGGAKGIGKAITVALAQEGAKVVINYNSSK-------EAAENLVNELGKEGH------ 56

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQ 174
               V  +  DV +  D  +L   AVN FG +DI +NNAG   ++ FK L     E+ E+
Sbjct: 57  ---DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL---NREDWER 110

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG----AGSGGSSTPLTAVYGSTKCGLR 230
           ++  NL  S+  T  A+     + + G I ++      AG  G +      Y + K G+ 
Sbjct: 111 VIDVNL-SSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTN-----YSAAKAGML 164

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 290
               SL  E  ++ V V+   PG + T++               + E+PE V + +V +I
Sbjct: 165 GFTKSLALELAKTNVTVNAICPGFIDTEM---------------VAEVPEEVRQKIVAKI 209

Length = 247

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 4e-13
 Identities = 66/235 (28%), Positives = 93/235 (39%), Gaps = 35/235 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  VITG   G+G A AR     G  VVV     E+ +    E+           GG   
Sbjct: 8   RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----------GGLF- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV +   V  L + A   +GS+DI  NNAG +      +  T  +  
Sbjct: 56  ----------VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAW 105

Query: 174 QIVS-TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           Q V   NL    LC + A+  M  Q KG  I         GS+T   + Y ++K G+  +
Sbjct: 106 QRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQIS-YTASKGGVLAM 164

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
              L  +  R  + V+   PG V T LL        +++F    + PE  AR LV
Sbjct: 165 SRELGVQFARQGIRVNALCPGPVNTPLL--------QELF---AKDPERAARRLV 208

Length = 255

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 67.9 bits (166), Expect = 5e-13
 Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 26/202 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+T G G+ + R F+  G +V+   R  E ++    EL +NL              
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYI------------ 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      DV   A ++++      E+ +ID+ +NNAG   G +P  + + E+ E +
Sbjct: 51  --------AQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETM 102

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLRQLQ 233
           + TN  G +  TR  +  M ++   GHI N+   GS   S P     VYG+TK  +RQ  
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVERNH-GHIINI---GSTAGSWPYAGGNVYGATKAFVRQFS 158

Query: 234 ASLFKESKRSKVGVHTASPGMV 255
            +L  +   + V V    PG+V
Sbjct: 159 LNLRTDLHGTAVRVTDIEPGLV 180

Length = 248

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 67.8 bits (166), Expect = 6e-13
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 22/207 (10%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            +  ++T S  G+GKA A      G  + +   S E       E  +   E + + G   
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE-------EGAKETAEEVRSHG--- 51

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +      D+ +  +  +  +  +   G ID+ +NNAG      P L    +E 
Sbjct: 52  ------VRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK-APFLDMDFDEW 104

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLR 230
            +I + ++ G+ LC++ A R M  Q +GG I N+    S    TPL   + Y + K  L 
Sbjct: 105 RKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINIT---SVHEHTPLPGASAYTAAKHALG 161

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLT 257
            L  ++  E     + V+  +PG + T
Sbjct: 162 GLTKAMALELVEHGILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 6e-13
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 24/210 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +   +TG+  G+G+A A      G  + +  R ++ +  TV +          A GG+  
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADAR--------ALGGT-- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFA---VNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
              V    A    D+   +D   ++ FA       GS+D+ +N AG +  +  + + T+E
Sbjct: 51  ---VPEHRAL---DI---SDYDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVDRLTHE 100

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
           +  ++V  NL+G I      +  M    +GGH+ N+  A +G  + P  A Y ++K GLR
Sbjct: 101 QWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA-AGLVALPWHAAYSASKFGLR 159

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDLL 260
            L   L  +  R  +GV    PG V T L+
Sbjct: 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLV 189

Length = 272

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 6e-13
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 28/206 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           ++V++TG++ G+G+A A      G RVV A+R           L+    E     G    
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGE----TGCE-- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV + A ++     A+   G+ D  +N AG     +  L  T E  +
Sbjct: 57  ---------PLRLDVGDDAAIRA----ALAAAGAFDGLVNCAGIASL-ESALDMTAEGFD 102

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++++ N  G+ L  R   R M    +GG I N+          P    Y ++K  L  + 
Sbjct: 103 RVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQA-ALVGLPDHLAYCASKAALDAIT 161

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
             L  E     + V++ +P + LT +
Sbjct: 162 RVLCVELGPHGIRVNSVNPTVTLTPM 187

Length = 245

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 67.2 bits (165), Expect = 7e-13
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 31/207 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           + V++TG+ RG+G+A   + L  G  +V  A+R  ESV                      
Sbjct: 7   KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV---------------------- 44

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
               +  +V  +  DV +PA V   +  A      + I +NNAG  +    LL+   + +
Sbjct: 45  --TDLGPRVVPLQLDVTDPASVAAAAEAA----SDVTILVNNAGIFRTGSLLLEGDEDAL 98

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
              + TN  G +   R    V+     GG I N+    S   + P    Y ++K     L
Sbjct: 99  RAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLS-WVNFPNLGTYSASKAAAWSL 156

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L  E       V    PG + TD+
Sbjct: 157 TQALRAELAPQGTRVLGVHPGPIDTDM 183

Length = 238

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 68.1 bits (167), Expect = 8e-13
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 26/208 (12%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           VITG+  G G A AR     G ++V+A    +++   V EL         A G       
Sbjct: 10  VITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELR--------AQG------- 54

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
             A+V G+  DV + A V+ L++ A+  FG++ +  NNAG   G   + + +  + E ++
Sbjct: 55  --AEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG-GLVWENSLADWEWVL 111

Query: 177 STNLVGSILCTREAMRVM-----RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
             NL G I   R    +M     +D    GHI N   + +G  + P   +Y  +K  +  
Sbjct: 112 GVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNT-ASMAGLLAPPAMGIYNVSKHAVVS 170

Query: 232 LQASLFKESK--RSKVGVHTASPGMVLT 257
           L  +L+++      +VG     P  V T
Sbjct: 171 LTETLYQDLSLVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 67.1 bits (164), Expect = 8e-13
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 30/207 (14%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG++RGLG A+AR F   G RVVV    S       TE  E +     AA    +  
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRS-------TESAEAV-----AAEAGERAI 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE-- 173
            + A       DV +   VQ +   A N FG +D  +NNA  +  F P  + T + I+  
Sbjct: 51  AIQA-------DVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWE 103

Query: 174 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV--YGSTKCG 228
              Q +   + G++   +  +   +++   G + N+   G+     P+     Y + K  
Sbjct: 104 DYQQQLEGAVKGALNLLQAVLPDFKER-GSGRVINI---GTNLFQNPVVPYHDYTTAKAA 159

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMV 255
           L     ++ KE     + V+  S G++
Sbjct: 160 LLGFTRNMAKELGPYGITVNMVSGGLL 186

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 67.3 bits (164), Expect = 1e-12
 Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 27/218 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  VITG   G+G A   EF   G RVV+       +R  V          + A G    
Sbjct: 7   RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV--------NHLRAEG---- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V G+ CDV    +V  L++ A    G +D+  +NAG   G  P+++ T+++  
Sbjct: 55  -----FDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVG-GPIVEMTHDDWR 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHI-FNMDGAG---SGGSSTPLTAVYGSTKCGL 229
            ++  +L GSI      +  + +Q  GGH+ F    AG   + G        YG  K G+
Sbjct: 109 WVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGA-----YGVAKYGV 163

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
             L  +L +E     +GV    P +V T+L+ +   I+
Sbjct: 164 VGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR 201

Length = 275

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 24/201 (11%)

Query: 51  AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 110
            G R +++TG++ G+G+A A +F   G  VV  +R  +        L + + + +  AGG
Sbjct: 39  TGKR-ILLTGASSGIGEAAAEQFARRGATVVAVARRED--------LLDAVADRITRAGG 89

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN- 169
            +      A    + CD+ +   V  L        G +DI INNAG +   +PL +  + 
Sbjct: 90  DA-----MA----VPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR-RPLAESLDR 139

Query: 170 -EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
             ++E+ +  N    +   R     M ++   GHI N+   G    ++PL +VY ++K  
Sbjct: 140 WHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEASPLFSVYNASKAA 198

Query: 229 LRQLQASLFKESKRSKVGVHT 249
           L  +   +  E++    GVH+
Sbjct: 199 LSAVSRVI--ETEWGDRGVHS 217

Length = 293

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG   GLG A A      G ++ +   + E +      L E   +          
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPD---------- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A+V  I  DV + A V+   +  V +FG ID + NNAG          F  +E +
Sbjct: 54  -----AEVLLIKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFD 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG---SGGSSTPLTAVYGSTKCGLR 230
           ++VS NL G      + ++VMR+Q   G I N    G     G+ +     Y + K G+ 
Sbjct: 109 KVVSINLRGVFYGLEKVLKVMREQ-GSGMIVNTASVGGIRGVGNQSG----YAAAKHGVV 163

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLT 257
            L  +   E  +  + ++  +PG +LT
Sbjct: 164 GLTRNSAVEYGQYGIRINAIAPGAILT 190

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 66.4 bits (162), Expect = 2e-12
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG   G+G+++ R F   G +V +     +        L +N+ + +   GG      
Sbjct: 22  LVTGGATGIGESIVRLFHKHGAKVCIVDLQDD--------LGQNVCDSL---GGEPNVCF 70

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQI 175
            H       CDV    DV +  +F V++FG++DI +NNAG      P ++     E E++
Sbjct: 71  FH-------CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKV 123

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
              N+ G  L  + A R+M    KG  +     A + G   P    Y  +K  +  L  S
Sbjct: 124 FDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--HAYTGSKHAVLGLTRS 181

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLS 262
           +  E  +  + V+  SP  V T L L+
Sbjct: 182 VAAELGKHGIRVNCVSPYAVPTALALA 208

Length = 280

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.4 bits (160), Expect = 3e-12
 Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 48/188 (25%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG+  G+G A AR FL  G +V    +  +       +L  N             
Sbjct: 6   KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP------DLSGNF------------ 47

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
               H        D+ +  +         +   S+DI  N AG    +KPLL  + EE +
Sbjct: 48  ----HFLQL----DLSDDLEP------LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQ 93

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-----AGSGGSSTPLTAVYGSTKCG 228
            I  TNL  + L TR  +  M ++ K G I NM       AG GG      A Y ++K  
Sbjct: 94  HIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSIASFVAGGGG------AAYTASKHA 146

Query: 229 L----RQL 232
           L    +QL
Sbjct: 147 LAGFTKQL 154

Length = 235

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 65.3 bits (160), Expect = 4e-12
 Identities = 63/279 (22%), Positives = 106/279 (37%), Gaps = 42/279 (15%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            +++ ITG+  G+G+A A  F   G RV     +   +     EL           G   
Sbjct: 1   MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-----------GAG- 48

Query: 113 KKNLVHAKVAGIACDVCEPADVQK-LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
             N     +     DV + A     L++FA    G +D+  NNAG  +G  P      E 
Sbjct: 49  --NAWTGAL-----DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG-GPFEDIPLEA 100

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            ++++  N+ G +     A+  ++  P G  + N   A S     P  AVY +TK  +R 
Sbjct: 101 HDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSA-SAIYGQPGLAVYSATKFAVRG 158

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGS------TIQNKQMFNIICELPETVART 285
           L  +L  E +R  + V    P  V T +L   S      + +      +    PE VA  
Sbjct: 159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKR-LGVRLT---PEDVAEA 214

Query: 286 LVPRIRVVKGSGKAINYLTPPRILL-----ALVTAWLRR 319
           +   ++        +++    +  L      L   ++RR
Sbjct: 215 VWAAVQ----HPTRLHWPVGKQAKLLAFLARLSPGFVRR 249

Length = 260

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 65.0 bits (159), Expect = 6e-12
 Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 24/200 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+ +G+G A+AR    +G RV    R+ E +   V +L                  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRY--------------- 45

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                 A    DV + A V ++      E+G ID+ +N AG  +    +   ++E+ +  
Sbjct: 46  --GYPFATYKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILR-LGAIDSLSDEDWQAT 102

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQ 233
            + N  G    ++     M+ + + G I  +   GS  ++ P    A Y ++K  L  L 
Sbjct: 103 FAVNTFGVFNVSQAVSPRMKRR-RSGAIVTV---GSNAANVPRMGMAAYAASKAALTMLT 158

Query: 234 ASLFKESKRSKVGVHTASPG 253
             L  E     +  +  SPG
Sbjct: 159 KCLGLELAPYGIRCNVVSPG 178

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 25/163 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG + G+GKA+A+ F   G  VV+  R+ E +     E+E+    G           
Sbjct: 4   VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PG----------- 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEIEQ 174
               +V  +  DV  P DVQK+      +FG ID  INNA  N  F  P    +      
Sbjct: 51  ----QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGN--FICPAEDLSVNGWNS 104

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-----GAGSG 212
           ++   L G+  C++   +   ++   G+I NM       AG G
Sbjct: 105 VIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG 147

Length = 252

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 7e-12
 Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 27/203 (13%)

Query: 55  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            V+ITG + G+G+ALA  F  +G  V   +R +E V            E + AAG     
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV------------EALAAAG----- 45

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                    +  DV + A + +L+     E G +D+ INNAG      PLL    E + +
Sbjct: 46  ------FTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYG-AMGPLLDGGVEAMRR 98

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
              TN+   +  TR    ++R     G + N+ G+ SG   TP    Y ++K  +  L  
Sbjct: 99  QFETNVFAVVGVTRALFPLLRR--SRGLVVNI-GSVSGVLVTPFAGAYCASKAAVHALSD 155

Query: 235 SLFKESKRSKVGVHTASPGMVLT 257
           +L  E     V V    PG + +
Sbjct: 156 ALRLELAPFGVQVMEVQPGAIAS 178

Length = 274

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 8e-12
 Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 33/209 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG+  G+G+ALAR FL +GDRV+     + ++      L +              
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD-------------- 48

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A+   +ACD+ + A +      A  E G +D+ + NAG  +     L  T     
Sbjct: 49  -----ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAAS--LHDTTPASW 101

Query: 174 QI-VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV----YGSTKCG 228
           +   + NL  + LC    +  M  + +G  + N+      GS   + A+    Y + K G
Sbjct: 102 RADNALNLEAAYLCVEAVLEGMLKRSRGA-VVNI------GSVNGMAALGHPAYSAAKAG 154

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLT 257
           L      L  E  R  +  +  +PG V T
Sbjct: 155 LIHYTKLLAVEYGRFGIRANAVAPGTVKT 183

Length = 257

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 8e-12
 Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 22/205 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG++ G+G A+A+ +  +G  +V    + E V   +    E    G+        
Sbjct: 11  KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE---LGI-------- 59

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +  G  CDV +   VQ + +    E G IDI +NNAG  K   P+L+ + E+  
Sbjct: 60  ------EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKR-IPMLEMSAEDFR 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG-GSSTPLTAVYGSTKCGLRQL 232
           Q++  +L    + ++  +  M  +   G I N+    S  G  T   + Y + K GL+ L
Sbjct: 113 QVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSELGRET--VSAYAAAKGGLKML 169

Query: 233 QASLFKESKRSKVGVHTASPGMVLT 257
             ++  E   + +  +   PG + T
Sbjct: 170 TKNIASEYGEANIQCNGIGPGYIAT 194

Length = 265

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 20/198 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VV++G   GLG+ LA     +G  VV+A+R       T   L+E   E +   G      
Sbjct: 8   VVVSGVGPGLGRTLAVRAARAGADVVLAAR-------TAERLDEVAAE-IDDLGRR---- 55

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  D+ +      L   A+  FG +D  +NNA      KPL          +
Sbjct: 56  -----ALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAV 110

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  N++G++  T+     +     GG I  ++       S P    Y   K  L     S
Sbjct: 111 IELNVLGTLRLTQAFTPALA--ESGGSIVMINSM-VLRHSQPKYGAYKMAKGALLAASQS 167

Query: 236 LFKESKRSKVGVHTASPG 253
           L  E     + V++ +PG
Sbjct: 168 LATELGPQGIRVNSVAPG 185

Length = 258

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 31/208 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ +G+G+A  +    +G RVV  SR+   +   V E                 
Sbjct: 8   KRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE----------------- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                    GI     + +D    +  A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 51  -------CPGIEPVCVDLSDWDA-TEEALGSVGPVDLLVNNAAVAI-LQPFLEVTKEAFD 101

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 231
           +    N+   I  ++   R M  +   G I N+    S  S   LT   VY STK  L  
Sbjct: 102 RSFDVNVRAVIHVSQIVARGMIARGVPGSIVNVS---SQASQRALTNHTVYCSTKAALDM 158

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L   +  E    K+ V++ +P +V+TD+
Sbjct: 159 LTKVMALELGPHKIRVNSVNPTVVMTDM 186

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 22/206 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + VV+TG+ RG+G  LAR     G ++ +       +     EL                
Sbjct: 10  KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-------------- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  +  DV + A +Q  +  AV  FG ID+ + NAG   G   + Q   +   
Sbjct: 56  ----DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFR 110

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL+G     R  +  + +  + G++  +    +  ++ P  A Y ++K G+    
Sbjct: 111 RVIDVNLLGVFHTVRATLPALIE--RRGYVLQVSSLAAFAAA-PGMAAYCASKAGVEAFA 167

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L  E     V V +A    + TDL
Sbjct: 168 NALRLEVAHHGVTVGSAYLSWIDTDL 193

Length = 296

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 44/214 (20%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG T+G+G A     L +G RVV  +RS            ++L EG         
Sbjct: 10  KRALVTGGTKGIGAATVARLLEAGARVVTTARSRP----------DDLPEG--------- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK----GFKPLLQFTN 169
                  V  +A D+        ++   +   G +DI ++  G +     GF  L   T+
Sbjct: 51  -------VEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAAL---TD 100

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGG--HIFNMDGAGSGGSSTPL---TAVYGS 224
           EE +  ++ NL+ ++   R  +  M  +  G   H+       S     PL   T  Y +
Sbjct: 101 EEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHV------TSIQRRLPLPESTTAYAA 154

Query: 225 TKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 258
            K  L     SL KE     V V+T SPG + T+
Sbjct: 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE 188

Length = 260

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 31/207 (14%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+ +G+G+A+AR  L +G  V+        +      L                  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL---------------- 44

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      DV + A V+++ +  + E G ID  +N AG  +        + E+ EQ 
Sbjct: 45  --------TPLDVADAAAVREVCSRLLAEHGPIDALVNCAGVLR-PGATDPLSTEDWEQT 95

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQ 233
            + N+ G     +     M+D+ + G I  +    S  +  P    A YG++K  L  L 
Sbjct: 96  FAVNVTGVFNLLQAVAPHMKDR-RTGAIVTV---ASNAAHVPRISMAAYGASKAALASLS 151

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
             L  E     V  +  SPG   T + 
Sbjct: 152 KCLGLELAPYGVRCNVVSPGSTDTAMQ 178

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG+  G+G+A A+ F   G RVVVA R +E+                +AAGG   
Sbjct: 6   RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAA---------IAAGG--- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +      DV     V+ L +F    +G +D+ +NNAG   G   ++     + +
Sbjct: 54  ------RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCG-GTVVTTDEADWD 106

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM--DGAGSGGSSTPLTAVYGSTKCGLRQ 231
            ++  N+ G  L  + A+ +M+ Q  GG I N     A +GG      A Y ++K  +  
Sbjct: 107 AVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALAGG---RGRAAYVASKGAIAS 162

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLL 260
           L  ++  +     + V+  +PG + T   
Sbjct: 163 LTRAMALDHATDGIRVNAVAPGTIDTPYF 191

Length = 252

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 21/206 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           +ITG+  G+GK +A  F  +G  VVV+  ++++    V E+++         GG      
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ--------LGG------ 60

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              +     CD+    ++  L++FA+++ G +DI +NNAG   G KP       +  +  
Sbjct: 61  ---QAFACRCDITSEQELSALADFALSKLGKVDILVNNAG-GGGPKP-FDMPMADFRRAY 115

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+      ++     M ++  GG I  +    +  +       Y S+K     L  ++
Sbjct: 116 ELNVFSFFHLSQLVAPEM-EKNGGGVILTITSM-AAENKNINMTSYASSKAAASHLVRNM 173

Query: 237 FKESKRSKVGVHTASPGMVLTDLLLS 262
             +     + V+  +PG +LTD L S
Sbjct: 174 AFDLGEKNIRVNGIAPGAILTDALKS 199

Length = 255

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 26/206 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V ITG   GLG+A A      G RV +  R +  +  T+         G+ A      
Sbjct: 8   KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP--------GVPADAL--- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEE 171
                 ++ GI  D+ +P   ++  +    +FG +D  +N AG    F    +     + 
Sbjct: 57  ------RIGGI--DLVDPQAARRAVDEVNRQFGRLDALVNIAG---AFVWGTIADGDADT 105

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            +++   N+  ++  ++ A+  +     GG I N+ GAG+   + P    Y + K G+ +
Sbjct: 106 WDRMYGVNVKTTLNASKAALPALT-ASGGGRIVNI-GAGAALKAGPGMGAYAAAKAGVAR 163

Query: 232 LQASLFKESKRSKVGVHTASPGMVLT 257
           L  +L  E     + V+   P ++ T
Sbjct: 164 LTEALAAELLDRGITVNAVLPSIIDT 189

Length = 239

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 31/209 (14%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++ G G     E    G  V+   R+ E         +ENL               
Sbjct: 7   IVTGASSGFGLLTTLELAKKGYLVIATMRNPEK--------QENLLSQATQLNLQQ---- 54

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQI 175
            + KV     DV +   +       + E G ID+ +NNAG  N GF  + +   EE  + 
Sbjct: 55  -NIKV--QQLDVTDQNSIHNFQLV-LKEIGRIDLLVNNAGYANGGF--VEEIPVEEYRKQ 108

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
             TN+ G+I  T+  +  MR Q K G I N+  + SG    P  + Y S+K  L      
Sbjct: 109 FETNVFGAISVTQAVLPYMRKQ-KSGKIINI-SSISGRVGFPGLSPYVSSKYALEG---- 162

Query: 236 LFKESKRSKV---GVHTA--SPGMVLTDL 259
            F ES R ++   G+  A   PG   T++
Sbjct: 163 -FSESLRLELKPFGIDVALIEPGSYNTNI 190

Length = 280

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 22/179 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            ++TG T+GLG A+AR F   G   +V+  R++E       ELE                
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-------------- 54

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIE 173
               AK   +  D+ +  D +++   A   FG +D  +N AG T++G   +L  + E  +
Sbjct: 55  ---GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRG--TILDTSPELFD 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +  + N+       +EA+++MR +   G I N+    + G   P  A Y ++K  L  L
Sbjct: 110 RHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-PFLAAYCASKGALATL 167

Length = 260

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 34/241 (14%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
               +ITG++ G+GKA A  F  +G  + + +RS +++     EL               
Sbjct: 6   MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS------------- 52

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTN 169
                  K A  + D+  P  +       + +FG  D+ INNAG   T     PLL+   
Sbjct: 53  ----TGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTG----PLLEMPL 104

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
            + + ++  NL     C    +  MR +  GG I N+  + +  ++ P    Y  +K  L
Sbjct: 105 SDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINV-SSIAARNAFPQWGAYCVSKAAL 162

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLS---GSTIQNKQMFNIICELPETVARTL 286
                 L +E +   + V T + G V T L  +    +      M +     PE VA+T+
Sbjct: 163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLS-----PEQVAQTI 217

Query: 287 V 287
           +
Sbjct: 218 L 218

Length = 241

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 61.7 bits (150), Expect = 8e-11
 Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 21/202 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+ +G+G A+A+  +  G +V +   + E+ +    +L +         GG      
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK--------DGG------ 51

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              K   +  DV +   V       V+ FG +++ +NNAG      P+   T E+ +++ 
Sbjct: 52  ---KAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPT-TPIETITEEQFDKVY 107

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + N+ G I   + A    +    GG I N    AG  G+  P  AVY STK  +R L  +
Sbjct: 108 NINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN--PELAVYSSTKFAVRGLTQT 165

Query: 236 LFKESKRSKVGVHTASPGMVLT 257
             ++     + V+  +PG+V T
Sbjct: 166 AARDLASEGITVNAYAPGIVKT 187

Length = 256

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 61.1 bits (149), Expect = 9e-11
 Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 24/203 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+ + +G+A+A      G RVVV    SE       E +  LK+ + A        
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSE------AEAQR-LKDELNALRN----- 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEEIE 173
                   +  D+ + A    L   A   FG  D+ +NNA     F   PL Q + +   
Sbjct: 51  ----SAVLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASA---FYPTPLGQGSEDAWA 103

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++   NL    L  +   R +      G I N+  A +    T   A Y  +K  L  L 
Sbjct: 104 ELFGINLKAPYLLIQAFARRLAGSRN-GSIINIIDAMTDRPLTGYFA-YCMSKAALEGLT 161

Query: 234 ASLFKESKRSKVGVHTASPGMVL 256
            S   E     + V+  +PG++L
Sbjct: 162 RSAALELA-PNIRVNGIAPGLIL 183

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 61.4 bits (149), Expect = 1e-10
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 34/266 (12%)

Query: 58  ITGSTRGLGKA----LAREF--LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 111
           ITG+ RG G+A    LA E   +++ D     S        T  +L+E  +  + A G  
Sbjct: 8   ITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETAR-LVEALG-- 64

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                   KV     DV + A+V+ +    V +FG +D+ + NAG    +    + + E+
Sbjct: 65  -------RKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGV-LSYGRSWELSEEQ 116

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            + ++  NL G     +  +  M ++  GG I  +  + +G  + P  A Y + K GL  
Sbjct: 117 WDTVLDINLTGVWRTCKAVVPHMIERGNGGSII-ITSSVAGLKALPGLAHYAAAKHGLVG 175

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 291
           L  +L  E     + V++  P  V T +      I  + M     + PE  AR  +P   
Sbjct: 176 LTKTLANELAEYGIRVNSIHPYSVDTPM------IAPEAMREAFLKYPE-AARAFMP--- 225

Query: 292 VVKGSGKAINYLTPPRILLALVTAWL 317
                   ++   PP  +   V  WL
Sbjct: 226 -----ALPVSGFVPPEDVADAV-LWL 245

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 23/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + ++ITG++ GLG  +AREF   G  + + +R ++        LEE LK  ++A      
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTD-------RLEE-LKAELLARYPG-- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KVA  A DV +   V ++     +E G +D  I NAG  KG   L        +
Sbjct: 53  -----IKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKG-ARLGTGKFWANK 106

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGH---IFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
               TN V ++     AM + R+Q   GH   I ++  +   G      A Y ++K G+ 
Sbjct: 107 ATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSV--SAVRGLPGVKAA-YAASKAGVA 162

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
            L   L  E  ++ + V T  PG + +++
Sbjct: 163 SLGEGLRAELAKTPIKVSTIEPGYIRSEM 191

Length = 248

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 55/221 (24%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMM 106
           + + ITG++RG+G A+A      G  +V+A++++E       ++     E+E        
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-------- 58

Query: 107 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ 166
           AAGG         +   +  DV +   V      AV  FG IDI +NNA         + 
Sbjct: 59  AAGG---------QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASA-------IN 102

Query: 167 FTNEE---------IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF------NMDGAGS 211
            T  E         ++QI   N+ G+ L ++  +  ++      HI       N+D    
Sbjct: 103 LTGTEDTPMKRFDLMQQI---NVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWF 158

Query: 212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASP 252
              +    A YG + C L      L +E +   + V+   P
Sbjct: 159 APHTAYTMAKYGMSLCTL-----GLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 26/213 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++ GLG   A+    +G +VV+ASR  E ++    E+E        A GG++ 
Sbjct: 10  KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIE--------AEGGAA- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
               H     ++ DV +   ++     A  E G+IDI +NN+G +   K L+  T  + +
Sbjct: 61  ----HV----VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK-LVDVTPADFD 111

Query: 174 QIVSTNLVGSILCTREAMR--VMR-----DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTK 226
            +  TN  G+    +E  +  + R     +   GG I N+  + +G    P   +Y  +K
Sbjct: 112 FVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINI-ASVAGLRVLPQIGLYCMSK 170

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
             +  +  ++  E  R  + V+   PG + T++
Sbjct: 171 AAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203

Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 30/153 (19%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG ++G+GKA+       G  V+       S                        
Sbjct: 7   KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------------------ 42

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
               +  V     DV     V K  ++ ++++G IDI +NNAG    +  +     +E +
Sbjct: 43  ----YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIES-YGAIHAVEEDEWD 97

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           +I++ N+ G  L ++  +  M  Q   G I N+
Sbjct: 98  RIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINI 129

Length = 258

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           +ITG+ +G+G+ +AR F   G  +++   S E     + +L + L               
Sbjct: 10  LITGALQGIGEGIARVFARHGANLILLDISPE-----IEKLADELCGR------------ 52

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              +   +  DV +PA V      A  + G IDI +NNAG  +     L  ++E+ +  +
Sbjct: 53  -GHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCR-LGSFLDMSDEDRDFHI 110

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+ G    T+  +  M  + K G I  M        + P    Y  TK  +  L  SL
Sbjct: 111 DINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSL 169

Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
             E  +S + V+   PG V T +
Sbjct: 170 AVEYAQSGIRVNAICPGYVRTPM 192

Length = 263

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 18/209 (8%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG +RG+G+A A      G  V V  + +      V  L       +  AGG      
Sbjct: 5   LVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL-------ITQAGG------ 51

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              K   +  D+ +   V  +          +   +NNAG       +   T E I +++
Sbjct: 52  ---KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVL 108

Query: 177 STNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           STN+ G  LC REA++ M  +    GG I N+  A S   +      Y ++K  +  L  
Sbjct: 109 STNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTT 168

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSG 263
            L  E     + V+   PG + T++  SG
Sbjct: 169 GLSLEVAAQGIRVNCVRPGFIYTEMHASG 197

Length = 247

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 61.8 bits (150), Expect = 3e-10
 Identities = 53/213 (24%), Positives = 83/213 (38%), Gaps = 22/213 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R   +TG   G+G+  AR     G  VV+A  + E+      E+  N + G         
Sbjct: 415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI--NGQFGA-------- 464

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +  DV +   V+         +G +DI +NNAG      P  + T +E +
Sbjct: 465 -----GRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS-SPFEETTLQEWQ 518

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
             +     G  L  REA R MR+Q  GG+I     + +   +    + Y + K     L 
Sbjct: 519 LNLDILATGYFLVAREAFRQMREQGLGGNIV-FIASKNAVYAGKNASAYSAAKAAEAHLA 577

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI 266
             L  E     + V+T +P     D +L GS I
Sbjct: 578 RCLAAEGGTYGIRVNTVNP-----DAVLQGSGI 605

Length = 676

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 59.8 bits (145), Expect = 3e-10
 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 28/206 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++TG +RG+G+ +A+ FL +G RV++++R +E+      EL              S 
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL--------------SA 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A    I  D+     ++ L          +D+ +NNAG   G  PL  F     +
Sbjct: 53  YGECIA----IPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWG-APLEAFPESGWD 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGH------IFNMDGAGSGGSSTPLTAVYGSTKC 227
           +++  N+      T+  + ++R      +      I ++ G    G        YG++K 
Sbjct: 108 KVMDINVKSVFFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLE---NYSYGASKA 164

Query: 228 GLRQLQASLFKESKRSKVGVHTASPG 253
            + QL   L KE     + V+  +PG
Sbjct: 165 AVHQLTRKLAKELAGEHITVNAIAPG 190

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 21/211 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG   G+G+A+A  F   G  V +     E       +  E  K+ +   G    
Sbjct: 27  KKALITGGDSGIGRAVAIAFAREGADVAINYLPEE------EDDAEETKKLIEEEGR--- 77

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   I  D+ + +  + L    V EFG +DI +NNA      + +   T E++E
Sbjct: 78  ------KCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLE 131

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +   TN+      T+ A+  +    KG  I N        GS   L   Y +TK  +   
Sbjct: 132 KTFRTNIFSMFYLTKAALPHL---KKGSSIINTTSVTAYKGSPHLLD--YAATKGAIVAF 186

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
              L  +     + V+  +PG + T L+ S 
Sbjct: 187 TRGLSLQLAEKGIRVNAVAPGPIWTPLIPSS 217

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 32/215 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V+ITG+++GLG+A+A + L  G  V+  SR+       +T+L E              
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK---ELTKLAEQ-----------YN 47

Query: 114 KNLVHAKVAGIACDVCEPADVQK-----LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 168
            NL        + D+ +  +++      LS+   +   SI + INNAG     KP+ +  
Sbjct: 48  SNLTF-----HSLDLQDVHELETNFNEILSSIQEDNVSSIHL-INNAGMVAPIKPIEKAE 101

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTK 226
           +EE+   V  NL+  ++ T   M+  +D      + N+    SG +  P    + Y S+K
Sbjct: 102 SEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINIS---SGAAKNPYFGWSAYCSSK 158

Query: 227 CGLRQLQASLFKESKRSKVGVHTAS--PGMVLTDL 259
            GL     ++  E +  +  V   +  PG++ T++
Sbjct: 159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG+++G+G A A  F   G  + + +R ++++        E L   + AA G   
Sbjct: 8   KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL--------EALAADLRAAHG--- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  VA  A D+  P   ++L+  A    G IDI +NNAG   G   L    +    
Sbjct: 57  -----VDVAVHALDLSSPEAREQLAAEA----GDIDILVNNAGAIPG-GGLDDVDDAAWR 106

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST-KCGLRQL 232
                 + G I  TR A   M+ +   G I N+   G+ G +     + GS     L   
Sbjct: 107 AGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNV--IGAAGENPDADYICGSAGNAALMAF 163

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLL 261
             +L  +S    V V   +PG V TD +L
Sbjct: 164 TRALGGKSLDDGVRVVGVNPGPVATDRML 192

Length = 259

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 50/217 (23%), Positives = 81/217 (37%), Gaps = 34/217 (15%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           V+TG   GLG A     L  G +VV+    +          E   K G            
Sbjct: 6   VVTGGASGLGLATVERLLAQGAKVVILDLPNS-------PGETVAKLG------------ 46

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-----GFKPLLQFTNEE 171
                  +  DV    DV+     A  +FG +DI +N AG          K     + E 
Sbjct: 47  --DNCRFVPVDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLEL 104

Query: 172 IEQIVSTNLVGSILCTREAMRVM-RDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGST 225
            +++++ NL+G+    R A   M +++P     +G  I     A   G      A Y ++
Sbjct: 105 FQRVINVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQ--IGQAAYSAS 162

Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 262
           K G+  +   + ++     + V T +PG+  T LL  
Sbjct: 163 KGGIVGMTLPIARDLAPQGIRVVTIAPGLFDTPLLAG 199

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 25/207 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+  GLG+ +A     +G  +V A RS      + T      ++ + A G    
Sbjct: 6   KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE----PSET------QQQVEALGR--- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +  D+ +   ++ L + AV EFG IDI +NNAG  +      +F+ ++ +
Sbjct: 53  ------RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRAD-AEEFSEKDWD 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
            +++ NL      T+ A +    Q +GG I N+    S  GG   P    Y ++K  +  
Sbjct: 106 DVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVP---SYTASKHAVAG 162

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTD 258
           L   L  E     + V+  +PG + T+
Sbjct: 163 LTKLLANEWAAKGINVNAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 6e-10
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 17/103 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG++ G+G+A A +   +G  V + +R+ E++   V E+         A GG   
Sbjct: 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIR--------AKGG--- 420

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 156
                       CD+ + A V       + E G +D  +NNAG
Sbjct: 421 ------TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAG 457

Length = 657

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 59.0 bits (143), Expect = 7e-10
 Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 28/214 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKK 114
            ++TG++RG+G+ +A +   +G  V +  R+    +  T  E+E        A GG    
Sbjct: 6   ALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIE--------ARGG---- 53

Query: 115 NLVHAKVAGIACDVCEPADVQKL-SNFAVNEFGSIDIWINNA--GTNKGF----KPLLQF 167
                K   + CD  +  +V+ L    A  + G +DI +NNA            KP  + 
Sbjct: 54  -----KCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEE 108

Query: 168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 227
                + I +  L     C+  A  +M    K G I  +  + +GG        YG  K 
Sbjct: 109 PPTIWDDINNVGLRAHYACSVYAAPLMVKAGK-GLIVII--SSTGGLEYLFNVAYGVGKA 165

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 261
            + ++ A +  E K   V V +  PG V T+L+L
Sbjct: 166 AIDRMAADMAHELKPHGVAVVSLWPGFVRTELVL 199

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 7e-10
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 31/206 (15%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG   GLG+  A     +G  +++ +          T  +E              + L
Sbjct: 19  IVTGGNTGLGQGYAVALAKAGADIIITTHG--------TNWDET-------------RRL 57

Query: 117 VHA---KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           +     KV  +  D+ +P   +K+   A+ EFG IDI +NNAGT +   PLL++ +E+  
Sbjct: 58  IEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRR-APLLEYKDEDWN 116

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
            ++  NL      ++   +VM  Q   G I N+    S  GG   P    Y ++K G+  
Sbjct: 117 AVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSFQGGKFVP---AYTASKHGVAG 172

Query: 232 LQASLFKESKRSKVGVHTASPGMVLT 257
           L  +   E     + V+  +PG + T
Sbjct: 173 LTKAFANELAAYNIQVNAIAPGYIKT 198

Length = 258

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 58.6 bits (142), Expect = 7e-10
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 32/210 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG   GLG+A+   F+  G RV V  +S+  +            + + AA G     
Sbjct: 8   VLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL------------QELEAAHG----- 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--- 172
                V G+  DV    D ++     V  FG ID  I NAG       L+   ++ I   
Sbjct: 51  ---DAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEA 107

Query: 173 -EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SGGSSTPLTAVYGSTKCGL 229
            +++   N+ G +L  + A+  +    +G  IF +  AG    G     TA   +    +
Sbjct: 108 FDEVFHINVKGYLLAVKAALPALV-ASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLV 166

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           ++L   L        V V+  +PG + +DL
Sbjct: 167 KELAFEL-----APYVRVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.8 bits (143), Expect = 7e-10
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 23/152 (15%)

Query: 57  VITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           ++TG  RG+G  +AR    +G D  +      E +  T  EL      G           
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA---LG----------- 51

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEI 172
               +V     DV + +  + + + A   +G ID  +NNAG     +G   LL  T E  
Sbjct: 52  ---VEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRG--DLLDLTPESF 106

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 204
           +++++ NL G    T+   + M  QP+   + 
Sbjct: 107 DRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138

Length = 256

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 24/208 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +N++ITGS +G+G  LA      G  +++   ++E   + V +L +   EG+ A      
Sbjct: 10  KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ---EGIKA------ 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
               HA       +V    +V+        + G ID+ INNAG  +   P  +F  +E  
Sbjct: 61  ----HA----APFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRH-PFTEFPEQEWN 111

Query: 174 QIVSTNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            +++ N     L ++   R M  R   K  +I +M       + TP    Y ++K  ++ 
Sbjct: 112 DVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITP----YAASKGAVKM 167

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L   +  E  R  + V+  +PG   T++
Sbjct: 168 LTRGMCVELARHNIQVNGIAPGYFKTEM 195

Length = 254

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 20/199 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+I G  + LG  +AR+    G + V    +S + +    E    +K    AAG      
Sbjct: 11  VLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVK----AAG------ 60

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQ 174
              AK      D+   A V+KL + A   FG  DI IN  G  K   KP+++ +  E ++
Sbjct: 61  ---AKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVG--KVLKKPIVEISEAEYDE 115

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           + + N   +    +EA R + D    G I  +  +   G+ TP  + Y  +K  +     
Sbjct: 116 MFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTS-LLGAFTPFYSAYAGSKAPVEHFTR 171

Query: 235 SLFKESKRSKVGVHTASPG 253
           +  KE     + V    PG
Sbjct: 172 AASKEFGARGISVTAVGPG 190

Length = 257

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 56.0 bits (135), Expect = 4e-09
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 20/206 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R +++TG++ G+G+  A  +   G  V++  R+ E +R     + E              
Sbjct: 5   RIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINE-------------- 50

Query: 114 KNLVHAKVAGIACDV--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                 +      D+  C   + Q+L+      +  +D  ++NAG      PL +   + 
Sbjct: 51  --EGGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQV 108

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            + +   N+  + + T+  + ++     G  +F     G  G +      Y  +K     
Sbjct: 109 WQDVXQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAVSKFATEG 166

Query: 232 LQASLFKESKRSKVGVHTASPGMVLT 257
           L   L  E ++  + V+  +PG   T
Sbjct: 167 LXQVLADEYQQRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 55.9 bits (135), Expect = 5e-09
 Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 27/205 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           V++TG+ RG+GKA     L  G  +V  A R   S       L                K
Sbjct: 6   VLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGS----AAHLVA--------------K 47

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                KV  +  DV +P  ++  +  A +    +D+ INNAG  K    L +   E ++Q
Sbjct: 48  YG--DKVVPLRLDVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQ 101

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            +  N+ G +   +    V++    G  I N++   S   + P    Y ++K     L  
Sbjct: 102 EMDVNVFGLLRLAQAFAPVLKANGGGA-IVNLNSVAS-LKNFPAMGTYSASKSAAYSLTQ 159

Query: 235 SLFKESKRSKVGVHTASPGMVLTDL 259
            L  E       V +  PG + T +
Sbjct: 160 GLRAELAAQGTLVLSVHPGPIDTRM 184

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 5e-09
 Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 27/171 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG   G+G+AL   FL  G RV V  RS+E +        ++               
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDH--------------- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ- 174
                V  +  DV   AD Q+  +  V+ FG +D ++ NAG       L+    E ++  
Sbjct: 54  -----VLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTA 108

Query: 175 ---IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SGGSSTPLTA 220
              I + N+ G +L  + A+  ++    G  IF +  +    GG     TA
Sbjct: 109 FDEIFNVNVKGYLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTA 158

Length = 263

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 34/222 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG   GLG+AL   F+  G +V V  RS+E     V EL  +  +            
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK----VAELRADFGD------------ 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--- 172
                V G+  DV   AD ++     V  FG +D +I NAG       L+    E++   
Sbjct: 51  ----AVVGVEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEA 106

Query: 173 -EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG---SGGSSTPLTAVYGSTKCG 228
            +++   N+ G IL  + A+  +    +G  IF +  AG    GG       +Y ++K  
Sbjct: 107 FDELFHINVKGYILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGP-----LYTASKHA 160

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 270
           +  L   L  E     + V+  +PG ++TDL    S  Q + 
Sbjct: 161 VVGLVKQLAYELA-PHIRVNGVAPGGMVTDLRGPASLGQGET 201

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 39/211 (18%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              +ITG++RG+G A+ARE L     +++  R +E +     EL                
Sbjct: 4   PTALITGASRGIGAAIARE-LAPTHTLLLGGRPAERLDELAAELPG-------------- 48

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                        D+ +P  +      AV + G +D+ ++NAG  + G  P+ + T +E 
Sbjct: 49  -------ATPFPVDLTDPEAIAA----AVEQLGRLDVLVHNAGVADLG--PVAESTVDEW 95

Query: 173 EQIVSTNLVGSILCTRE---AMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
              +  N+V     TR    A+R        GH+  ++ +G+G  + P    Y ++K  L
Sbjct: 96  RATLEVNVVAPAELTRLLLPALRAAH-----GHVVFIN-SGAGLRANPGWGSYAASKFAL 149

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
           R L  +L +E +   V V +  PG   TD+ 
Sbjct: 150 RALADALREE-EPGNVRVTSVHPGRTDTDMQ 179

Length = 227

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 33/209 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V +TG+ +G+G A+A  F+ +G +V+   ++          L +              
Sbjct: 9   KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA---------FLTQE------------- 46

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   A    DV + A V ++    + E G +D+ +N AG  +        ++E+ +
Sbjct: 47  ----DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILR-MGATDSLSDEDWQ 101

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 231
           Q  + N  G+    R  M   R Q + G I  +   GS  +  P    A YG++K  L  
Sbjct: 102 QTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTV---GSNAAHVPRIGMAAYGASKAALTS 157

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLL 260
           L   +  E     V  +  SPG   TD+ 
Sbjct: 158 LAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186

Length = 252

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 55.4 bits (134), Expect = 8e-09
 Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 41/219 (18%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           ++ITG+   +G AL +  L +G  V+ A    E++   +  L +  K             
Sbjct: 7   ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK------------- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA-GTNKGF-KPLLQFTNEEIE 173
               K++ +  D+ +   +++  + +  ++G ID  +N A   NK + K     + ++  
Sbjct: 54  --SKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFN 111

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS--------------TPLT 219
           + +S +L  S L +++  +  + Q  GG++ N+       SS              T +T
Sbjct: 112 ENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNI-------SSIYGVVAPKFEIYEGTSMT 163

Query: 220 AV--YGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 256
           +   Y + K G+  L   L K  K S + V+  SPG +L
Sbjct: 164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGIL 202

Length = 256

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 55.3 bits (133), Expect = 9e-09
 Identities = 50/205 (24%), Positives = 79/205 (38%), Gaps = 27/205 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSS 112
           +  ++TG   G+GK +  +FL +GD+VV A    E        E           A  + 
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETL 61

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
            K +V+A                      + + G ID+ +NNA        L     EE 
Sbjct: 62  VKFVVYA---------------------MLEKLGRIDVLVNNAARGSK-GILSSLLLEEW 99

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++I+S NL G    +R     +      G I N+  +     S P +  Y ++K GL  L
Sbjct: 100 DRILSVNLTGPYELSRYCRDELIKN--KGRIINI-ASTRAFQSEPDSEAYAASKGGLVAL 156

Query: 233 QASLFKESKRSKVGVHTASPGMVLT 257
             +L   S    + V+  SPG + T
Sbjct: 157 THAL-AMSLGPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 23/187 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TG+  GLG+A A      G  VVV   +S        +  + L E + AAG    
Sbjct: 13  KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA------LDASDVLDE-IRAAGA--- 62

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   +A D+ + A   +L   AV   G +DI +NNAG  +  + L   ++EE +
Sbjct: 63  ------KAVAVAGDISQRATADELVATAV-GLGGLDIVVNNAGITRD-RMLFNMSDEEWD 114

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPK--GGHIFN--MDGAGSGGSSTPL-TAVYGSTKCG 228
            +++ +L G  L TR A    R + K  GG ++   ++ +   G   P+  A YG+ K G
Sbjct: 115 AVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAG 174

Query: 229 LRQLQAS 235
           +  L  S
Sbjct: 175 ITALTLS 181

Length = 306

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 40/177 (22%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++ G+G+A A +   +G RV   SR+                     A  +    
Sbjct: 7   ALVTGASSGIGRATAEKLARAGYRVFGTSRN--------------------PARAAPI-- 44

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL----QFTNEE 171
                V  +  DV + A VQ   +  +   G ID+ +NNAG       L     + +  +
Sbjct: 45  ---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG-----LAGAAEESSIAQ 96

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTK 226
            + +  TN+ G +  TR  +  MR Q   G I N+    S  G    P  A+Y ++K
Sbjct: 97  AQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINI---SSVLGFLPAPYMALYAASK 149

Length = 270

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 29/199 (14%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG    +G A+AR  + +G RV +                        A  G++    
Sbjct: 10  IVTGGATLIGAAVARALVAAGARVAIVDID--------------------ADNGAAVAAS 49

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQ 174
           +  +   IA D+ + A +++     V  FG +DI +N A T  + G       +  +   
Sbjct: 50  LGERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS----SRADWLA 105

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            +  NLV + +  + A   +     GG I N   + S   +     +Y ++K  +RQL  
Sbjct: 106 ALDVNLVSAAMLAQAAHPHLARG--GGAIVNF-TSISAKFAQTGRWLYPASKAAIRQLTR 162

Query: 235 SLFKESKRSKVGVHTASPG 253
           S+  +     + V++ SPG
Sbjct: 163 SMAMDLAPDGIRVNSVSPG 181

Length = 261

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 26/157 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG +RGLG A+AR F   G RVVV    SE        L + L +  +A        
Sbjct: 8   VLVTGGSRGLGAAIARAFAREGARVVVNYHQSED---AAEALADELGDRAIA-------- 56

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIE- 173
                   +  DV +   VQ +   A   FG  I   +NNA  +  F    +   ++I  
Sbjct: 57  --------LQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITW 108

Query: 174 ----QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
               Q +  ++ G++   + A+  MR+Q   G I N+
Sbjct: 109 EDFQQQLEGSVKGALNTIQAALPGMREQ-GFGRIINI 144

Length = 253

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.8 bits (132), Expect = 2e-08
 Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 21/204 (10%)

Query: 57  VITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTV-TELEEN--LKEGMMAAGGS 111
           V+TG +R  G+G A+ +E   +G  +     ++    M    + +E   L+E ++  G  
Sbjct: 10  VVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG-- 67

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA--GTNKGFKPLLQFTN 169
                   KV+ +  D+ +    ++L N    + G   I +NNA   TN  F  L   T 
Sbjct: 68  -------VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNL---TA 117

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
           EE+++    N+  + L + +  R   D+  GG I NM  +G           Y +TK  +
Sbjct: 118 EELDKHYMVNVRATTLLSSQFAR-GFDKKSGGRIINMT-SGQFQGPMVGELAYAATKGAI 175

Query: 230 RQLQASLFKESKRSKVGVHTASPG 253
             L +SL  E     + V+  +PG
Sbjct: 176 DALTSSLAAEVAHLGITVNAINPG 199

Length = 256

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 25/205 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG T G+G   AR+FL  G RV +  R   S+     EL E+               
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGES--------------- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   I  D  + A  + L+      FG +D    NAG  K F PL  +     ++ 
Sbjct: 54  -----ALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAK-FAPLEDWDEAMFDRS 107

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            +TN+ G     +  + ++        I  ++G+ +     P ++VY ++K  L  L  +
Sbjct: 108 FNTNVKGPYFLIQALLPLLA---NPASIV-LNGSINAHIGMPNSSVYAASKAALLSLAKT 163

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           L  E     + V+  SPG V T L 
Sbjct: 164 LSGELLPRGIRVNAVSPGPVQTPLY 188

Length = 249

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 34/164 (20%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMM 106
           + + ITG++RG+GKA+A +    G  VV+A++++E       ++     E+E        
Sbjct: 4   KTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIE-------- 55

Query: 107 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG----TNKGFK 162
           AAGG         K      D+ +   V+     AV +FG IDI +NNA     T     
Sbjct: 56  AAGG---------KALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDT 106

Query: 163 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           P+ ++     + ++  N  G+ LC++  +  ++ + K  HI N+
Sbjct: 107 PMKRY-----DLMMGVNTRGTYLCSKACLPYLK-KSKNPHILNL 144

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 21/217 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSS 112
           R  +ITG+  G+G+A A  F   G  + +      E     V +L +       A G   
Sbjct: 56  RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-------AEG--- 105

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  K   +  D+ + A  ++L   AV E G +DI +N AG     K +   T E+ 
Sbjct: 106 ------RKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQF 159

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +    TN+       + A+  +   P G  I N     S   S  L   Y STK  +   
Sbjct: 160 DATFKTNVYAMFWLCKAAIPHL---PPGASIINTGSIQSYQPSPTLLD-YASTKAAIVAF 215

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 269
             +L K+     + V+  +PG V T L  SG     K
Sbjct: 216 TKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEK 252

Length = 300

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 19/206 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSS 112
           R V++TG+  G+G+A A  F   G RVVV           +     + + + ++AAGG +
Sbjct: 7   RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEA 66

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
             N           D+ +      L + AV  FG +D+ +NNAG  +  + +   + EE 
Sbjct: 67  VAN---------GDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRD-RMIANMSEEEW 116

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGH-----IFNM-DGAGSGGSSTPLTAVYGSTK 226
           + +++ +L G     R A    R + K G      I N   GAG  GS       Y + K
Sbjct: 117 DAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS--VGQGNYSAAK 174

Query: 227 CGLRQLQASLFKESKRSKVGVHTASP 252
            G+  L      E  R  V V+  +P
Sbjct: 175 AGIAALTLVAAAELGRYGVTVNAIAP 200

Length = 286

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 23/201 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +NVV+ G T G+   +A+ F  +G  V VASRS E V   V +L++              
Sbjct: 10  KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-------------- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEI 172
                 +  G++ DV + A V+       +EFG ID+ ++ A  N  F  P    +    
Sbjct: 56  ---AGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGN--FPAPAAGMSANGF 110

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + +V  +L+G+    + A  ++R    G  I  +  A       P+ A   + K G+  L
Sbjct: 111 KTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQIS-APQAFVPMPMQAHVCAAKAGVDML 167

Query: 233 QASLFKESKRSKVGVHTASPG 253
             +L  E     + V++  PG
Sbjct: 168 TRTLALEWGPEGIRVNSIVPG 188

Length = 264

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 26/203 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++ G+GKA AR     G  V  A+R  +  +M                      +
Sbjct: 6   ALVTGASSGIGKATARRLAAQGYTVYGAARRVD--KME---------------------D 42

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
           L    V  ++ DV + A ++   +  + E G ID+ +NNAG    +  +     +E  + 
Sbjct: 43  LASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGS-YGAIEDVPIDEARRQ 101

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
              NL G+   T+  +  MR Q + G I N+   G G   TPL A Y +TK  L     +
Sbjct: 102 FEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMG-GKIYTPLGAWYHATKFALEGFSDA 159

Query: 236 LFKESKRSKVGVHTASPGMVLTD 258
           L  E     + V    PG + T+
Sbjct: 160 LRLEVAPFGIDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 52.6 bits (126), Expect = 8e-08
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 28/227 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG++ G+G+ +AR     G  V +     E +     EL E +K  +  A  S +
Sbjct: 7   RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVK--IFPANLSDR 64

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                              +V+ L   A  +   +DI +NNAG T  G    ++ ++E+ 
Sbjct: 65  ------------------DEVKALGQKAEADLEGVDILVNNAGITKDGL--FVRMSDEDW 104

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + ++  NL  +   TRE    M  + + G I N+     G +  P  A Y ++K G+   
Sbjct: 105 DSVLEVNLTATFRLTRELTHPMMRR-RYGRIINITSV-VGVTGNPGQANYCASKAGMIGF 162

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
             SL +E     V V+  +PG + + +      + +KQ   I+  +P
Sbjct: 163 SKSLAQEIATRNVTVNCVAPGFIESAMT---GKLNDKQKEAIMGAIP 206

Length = 245

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 15/103 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  V+TG + G+G A     L +G  V +  R  E +      L E              
Sbjct: 9   RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP----------- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 156
                A++    CDV + ADV   +      FG +D+ +NNAG
Sbjct: 58  ----GARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 45/209 (21%), Positives = 77/209 (36%), Gaps = 43/209 (20%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +I G+T G+G+ALAR     G R++++ R +                            
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDA---------------------------- 32

Query: 116 LVHAKVAGIACDVCEPADVQKLSN-----FAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
                +AG+A +V   A    ++          E G +D+ +  AG   G KPL +    
Sbjct: 33  ---GALAGLAAEVGALARPADVAAELEVWALAQELGPLDLLVYAAGAILG-KPLARTKPA 88

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
              +I+  NL G+ L  + A+ ++     G  +  + GA       P  + Y + K  L 
Sbjct: 89  AWRRILDANLTGAALVLKHALALL---AAGARLVFL-GAYPELVMLPGLSAYAAAKAALE 144

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
                  KE +   + +    P  V T L
Sbjct: 145 AYVEVARKEVR--GLRLTLVRPPAVDTGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 18/102 (17%)

Query: 55  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           NV++T S+RG+G  +ARE L  G RVV++SR+ E++   + EL+E               
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE--------------- 46

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 156
              + +V  +  D+ +  D++ L   A    G ID  + NAG
Sbjct: 47  ---YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 28/210 (13%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG T G+GK  A +    G  +V+ +R+ + ++     ++             SK + 
Sbjct: 57  LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQ-------------SKYSK 103

Query: 117 VHAK--VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-IE 173
              K  V   + D+ E   V+++      E   + + INN G +  +       +EE ++
Sbjct: 104 TQIKTVVVDFSGDIDE--GVKRIKETI--EGLDVGVLINNVGVSYPYARFFHEVDEELLK 159

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS----STPLTAVYGSTKCGL 229
            ++  N+ G+   T+  +  M  + KG  I N+   GSG +    S PL AVY +TK  +
Sbjct: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGA-IINI---GSGAAIVIPSDPLYAVYAATKAYI 215

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
            Q    L+ E K+S + V    P  V T +
Sbjct: 216 DQFSRCLYVEYKKSGIDVQCQVPLYVATKM 245

Length = 320

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGS+RG+G   A+    +G  VVV  R               +   + AAGG   
Sbjct: 7   KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA-------PRANKVVAEIEAAGG--- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 155
                 + + +  D+ +   V  L + A  EFG +D  + NA
Sbjct: 57  ------RASAVGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 49/219 (22%), Positives = 80/219 (36%), Gaps = 56/219 (25%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKK 114
            +ITG  R +G A+AR    +G RV +    S +       EL                 
Sbjct: 9   ALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL----------------- 51

Query: 115 NLVHA-KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEE 171
           N +     A +  D+ +P  + +L    V  FG +D  +NNA +   F P  L   T  +
Sbjct: 52  NALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASS---FYPTPLGSITEAQ 108

Query: 172 IEQIVSTNLVGSILCTREAMRVMR--------------DQPKGGHIFNMDGAGSGGSSTP 217
            + + ++NL      ++ A   +R              ++P  G+               
Sbjct: 109 WDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYP-------------- 154

Query: 218 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 256
              VY + K  L  L  SL  E    +V V+  +PG +L
Sbjct: 155 ---VYCAAKAALEMLTRSLALELA-PEVRVNAVAPGAIL 189

Length = 249

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 51.2 bits (122), Expect = 2e-07
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 46/229 (20%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVA---SRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           ++TG++RG+G+A+A    L+ D  +VA    R+ ++   T+ E+E N        GG  K
Sbjct: 10  LVTGASRGIGRAIAMR--LANDGALVAIHYGRNKQAADETIREIESN--------GG--K 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQF 167
             L+ A +  I         V+KL     NE         IDI +NNAG   G +  ++ 
Sbjct: 58  AFLIEADLNSI-------DGVKKLVEQLKNELQIRVGTSEIDILVNNAGI--GTQGTIEN 108

Query: 168 TNEEI-EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVY 222
           T EEI ++I++ N+       ++ + ++R +   G + N+  A    G  GS       Y
Sbjct: 109 TTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE---GRVINISSAEVRLGFTGS-----IAY 160

Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQN 268
           G +K  L  +   L K      + V+T  PG   TD+   LL    I+N
Sbjct: 161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRN 209

Length = 254

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 30/210 (14%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           P  V ITG++ G+G+ALARE+   G  + + +R +++++     L +             
Sbjct: 2   PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK------------- 48

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                 A+V+  A DV +   +   +   +   G  D+ I NAG + G    L    E++
Sbjct: 49  -----AARVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVG---TLTEEREDL 100

Query: 173 E---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKC 227
               +++ TN  G +   +  +  MR   +G     + G  S  G    P    Y ++K 
Sbjct: 101 AVFREVMDTNYFGMVATFQPFIAPMRAARRG----TLVGIASVAGVRGLPGAGAYSASKA 156

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLT 257
              +   SL  E + + V V T +PG + T
Sbjct: 157 AAIKYLESLRVELRPAGVRVVTIAPGYIRT 186

Length = 257

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 48/207 (23%), Positives = 80/207 (38%), Gaps = 22/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TGS++G+G ALA     +G  V++  R    +      L+         A   + 
Sbjct: 11  RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD 70

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEI 172
            + V A +                      E G IDI +NNAG    F+ PL  F  +  
Sbjct: 71  HDAVRAAIDAFEA-----------------EIGPIDILVNNAGMQ--FRTPLEDFPADAF 111

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           E+++ TN+       +   R M  +   G I N+    S   + P  A Y +TK  +  L
Sbjct: 112 ERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIASVQS-ALARPGIAPYTATKGAVGNL 169

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
              +  +  +  +  +  +PG   T L
Sbjct: 170 TKGMATDWAKHGLQCNAIAPGYFDTPL 196

Length = 255

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 34/208 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +IT + +G+G+A+A  F   G  V+    +           EE LKE  +  G      
Sbjct: 5   ALITAAAQGIGRAIALAFAREGANVIATDIN-----------EEKLKE--LERGPG---- 47

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP---LLQFTNEEI 172
            +  +V     DV +   V  L      E G ID+  N AG    F     +L   +++ 
Sbjct: 48  -ITTRVL----DVTDKEQVAAL----AKEEGRIDVLFNCAG----FVHHGSILDCEDDDW 94

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +  ++ N+    L  +  +  M  + K G I NM    S     P   VY +TK  +  L
Sbjct: 95  DFAMNLNVRSMYLMIKAVLPKMLAR-KDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGL 153

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             S+  +  +  +  +   PG V T  L
Sbjct: 154 TKSVAADFAQQGIRCNAICPGTVDTPSL 181

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 21/202 (10%)

Query: 58  ITGSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           +TG+  G+G+ +A     +G  V     R+ + +  T   +E        AAG  +    
Sbjct: 13  VTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIE--------AAGRRA---- 60

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                  IA DV   AD++        E G++ + +N AG      P  +   E+ + ++
Sbjct: 61  -----IQIAADVTSKADLRAAVARTEAELGALTLAVNAAGI-ANANPAEEMEEEQWQTVM 114

Query: 177 STNLVGSIL-CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
             NL G  L C  EA R M +   G  +     +G   +   L A Y ++K G+  L  S
Sbjct: 115 DINLTGVFLSCQAEA-RAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKS 173

Query: 236 LFKESKRSKVGVHTASPGMVLT 257
           L  E     + V++ SPG   T
Sbjct: 174 LAMEWVGRGIRVNSISPGYTAT 195

Length = 254

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 46/217 (21%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA----SRSSESVRMTVTELEENLKEGMMAAGGS 111
            +ITG   G+G+A+A  F   G  + +        +   +  V       KEG       
Sbjct: 49  ALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE------KEG------- 95

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
             K L+      I  DV + A  +      V E G +DI +NNA      + L   T E+
Sbjct: 96  -VKCLL------IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQ 148

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----YGSTK 226
           +++   TN+      T+ A+  ++   +G  I N       GS T          Y +TK
Sbjct: 149 LDKTFKTNIYSYFHMTKAALPHLK---QGSAIINT------GSITGYEGNETLIDYSATK 199

Query: 227 CGL----RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
             +    R L  SL ++  R    V+  +PG + T L
Sbjct: 200 GAIHAFTRSLAQSLVQKGIR----VNAVAPGPIWTPL 232

Length = 290

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 50.6 bits (121), Expect = 4e-07
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 39/218 (17%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG   G+GK +A   + +G  V++  R+ + +     E+E       +   G+  
Sbjct: 8   RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEA------LKGAGA-- 59

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              V  + A    DV +   V +  + A    G +   ++ AG ++   P+ Q  ++   
Sbjct: 60  ---VRYEPA----DVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWR 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----------Y 222
           + V  N+ G++   + A R +               G GGS   ++++           Y
Sbjct: 113 RTVDLNVNGTMYVLKHAARELV-------------RGGGGSFVGISSIAASNTHRWFGAY 159

Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
           G TK  +  L      E   S V V++  PG++ TDL+
Sbjct: 160 GVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV 197

Length = 276

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 31/211 (14%)

Query: 58  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 117
           +TG   G+G A+ +     G RV      +E       E  E   +   A G        
Sbjct: 5   VTGGMGGIGTAICQRLAKDGYRVAANCGPNE-------ERAEAWLQEQGALG-------- 49

Query: 118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQI 175
                 +  DV      +        E G ID+ +NNAG   +  FK   + T E+   +
Sbjct: 50  -FDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFK---KMTYEQWSAV 105

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGLRQ 231
           + TNL      T+  +  MR++   G I N+       G  G +      Y + K G+  
Sbjct: 106 IDTNLNSVFNVTQPVIDGMRER-GWGRIINISSVNGQKGQFGQTN-----YSAAKAGMIG 159

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLS 262
              +L +E     V V+T SPG + TD++++
Sbjct: 160 FTKALAQEGATKGVTVNTISPGYIATDMVMA 190

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 48/240 (20%), Positives = 85/240 (35%), Gaps = 46/240 (19%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVAS-----------RSSESVRMTVTELEENLKEG 104
           V+ITG   G G  LA++    G  V+              R   S R+   +L       
Sbjct: 3   VLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQL------- 55

Query: 105 MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW--INNAGTNKGFK 162
                                 DV +P  +++ + +     G   +W  +NNAG      
Sbjct: 56  ----------------------DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGG 93

Query: 163 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 222
                  ++  + +  NL G++  T+  + ++R + KG  + N+  +  G    P    Y
Sbjct: 94  DEELLPMDDYRKCMEVNLFGTVEVTKAFLPLLR-RAKG-RVVNV-SSMGGRVPFPAGGAY 150

Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 282
            ++K  +     SL +E +   V V    PG   T +  +    + KQ   +   LP  V
Sbjct: 151 CASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGITGNSELWE-KQAKKLWERLPPEV 209

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 35/210 (16%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG +RGLG ALA + L  G  V+  +RS                  + AA G      
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--------------SLAAAAG------ 44

Query: 117 VHAKVAGIACDVCEPADV-QKLSNFAVNEFG---SIDIWINNAGTNKGFKPLLQFTNEEI 172
              ++A +  D+ + A     L+   +  F    S  + INNAGT +   PL       I
Sbjct: 45  --ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAI 102

Query: 173 EQIVSTNLVGSILCT-REAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGL 229
            + V  N+   ++ T   A        +   I ++    SG +       +VY +TK  L
Sbjct: 103 ARAVGLNVAAPLMLTAALAQAASDAAER--RILHIS---SGAARNAYAGWSVYCATKAAL 157

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
                ++  ++ R+ + + + +PG+V T +
Sbjct: 158 DHHARAVALDANRA-LRIVSLAPGVVDTGM 186

Length = 243

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 49.6 bits (118), Expect = 1e-06
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 19/216 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG   G+G+A A  +   G  V ++    E       E  +++K+ +   G    
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE------EDAQDVKKIIEECG---- 99

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   +  D+ +    + L + A    G +DI    AG       +   T+E+ +
Sbjct: 100 -----RKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQ 154

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +  + N+      T+EA+ ++   PKG  I       +   S P    Y +TK  +    
Sbjct: 155 KTFAINVFALFWLTQEAIPLL---PKGASIITTSSIQAYQPS-PHLLDYAATKAAILNYS 210

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 269
             L K+     + V+  +PG + T L +SG   Q+K
Sbjct: 211 RGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDK 246

Length = 294

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           +ITG   GLG+ +A     +G  +V                      G+  A     +  
Sbjct: 12  IITGCNTGLGQGMAIGLAKAGADIV----------------------GVGVAEAPETQAQ 49

Query: 117 VHA---KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           V A   K   I  D+ +  D+  + + AV   G IDI INNAG  +  + LL+F N++ +
Sbjct: 50  VEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR-QDLLEFGNKDWD 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
            +++ N       ++   +    Q  GG I N+    S  GG   P    Y ++K  +  
Sbjct: 109 DVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVP---SYTASKSAVMG 165

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTD 258
           L  +L  E  +  + V+  +PG + TD
Sbjct: 166 LTRALATELSQYNINVNAIAPGYMATD 192

Length = 251

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 19/211 (9%)

Query: 53  PRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 110
            +  ++TG++R  G+G A+ R     G  +     S     M     ++   E ++    
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDK---EPVLLKEE 61

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA--GTNKGFKPLLQFT 168
                    +   +  D+ +P    ++        G   I INNA   T+   + L   T
Sbjct: 62  IESYG---VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEEL---T 115

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTK 226
            E++++  + N+  ++L +    +   D   GG I N+    SG S  P+     Y +TK
Sbjct: 116 AEQLDKHYAVNVRATMLLSSAFAKQY-DGKAGGRIINLT---SGQSLGPMPDELAYAATK 171

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLT 257
             +     SL  E     + V+  +PG   T
Sbjct: 172 GAIEAFTKSLAPELAEKGITVNAVNPGPTDT 202

Length = 256

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 34/211 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++ G++ G+G A A E   +G  V + +R        V + EE L + + A GG + 
Sbjct: 11  RPALVAGASSGIGAATAIELAAAGFPVALGARR-------VEKCEE-LVDKIRADGGEA- 61

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                        DV +P  V+     A    G I++ ++ AG +  F  L + + E+ E
Sbjct: 62  --------VAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAG-DTYFGKLHEISTEQFE 112

Query: 174 QIVSTNLVGSILCTREAMRV---MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL- 229
             V  +LVG+    R A  V   M ++ +G  IF   G+       P    YG+ K GL 
Sbjct: 113 SQVQIHLVGA---NRLATAVLPGMIERRRGDLIFV--GSDVALRQRPHMGAYGAAKAGLE 167

Query: 230 ---RQLQASLFKESKRSKVGVHTASPGMVLT 257
                LQ  L     R+ + VH   PG  LT
Sbjct: 168 AMVTNLQMELEGTGVRASI-VH---PGPTLT 194

Length = 274

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 24/124 (19%)

Query: 57  VITGSTRGLGKALAREFL-LSGDRVVVASRSS-----ESVRMTVTELEENLKEGMMAAGG 110
           ++TG   G+G+ALAR      G R+V+  RS      E    T+  LE      +     
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY---- 264

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
                        I+ DV + A V++L       +G+ID  I+ AG  +    L Q T E
Sbjct: 265 -------------ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRD-ALLAQKTAE 310

Query: 171 EIEQ 174
           + E 
Sbjct: 311 DFEA 314

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 23/207 (11%)

Query: 58  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT-ELEENLKEGMMAAGGSSKKNL 116
           ITG+  GLG+A+AR     G +V +   +  +       E+     EG+  A        
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFA-------- 55

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                     DV + A  Q L   A +  G + + +NNAG    F  + Q   +E  +++
Sbjct: 56  -------AVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIELDEWRRVM 107

Query: 177 STNLVGSILCTREAMRVMRD-QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + N+    L  + A+  +R  QP    I N+    +   + P    Y ++K  +  L  S
Sbjct: 108 AINVESIFLGCKHALPYLRASQP--ASIVNISSV-AAFKAEPDYTAYNASKAAVASLTKS 164

Query: 236 LFKESKRSKVGVHTAS--PGMVLTDLL 260
           +  +  R  + V   S  P  + T ++
Sbjct: 165 IALDCARRGLDVRCNSIHPTFIRTGIV 191

Length = 251

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 47.1 bits (112), Expect = 5e-06
 Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 23/132 (17%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           + ITGS+ GLG A AR  L  G  VV+ +RS +                   A    K  
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKR---------------AADA----KAA 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
              A    I  D+   A+ +KL++  VN  G  D  I+NAG   G  P  +  +  I  +
Sbjct: 51  CPGAAGVLIG-DLSSLAETRKLAD-QVNAIGRFDAVIHNAGILSG--PNRKTPDTGIPAM 106

Query: 176 VSTNLVGSILCT 187
           V+ N++   + T
Sbjct: 107 VAVNVLAPYVLT 118

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 47.1 bits (112), Expect = 7e-06
 Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 36/220 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG+  G+GK  ARE    G RV++A R              ++ +   AA    +
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACR--------------DMAKCEEAAAEIRR 47

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFA---VNEFGSIDIWINNAG--------TNKGFK 162
             L H     +     + A ++ +  FA   + E   +D+ INNAG        T  GF+
Sbjct: 48  DTLNHE----VIVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFE 103

Query: 163 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---KGGHIFNMDGAGSGGSSTPLT 219
             +QF    +   + TNL+  +L      R++       K G I N D   S  S     
Sbjct: 104 --MQFGVNHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKI-NFDDLNSEKSYNTGF 160

Query: 220 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           A Y  +K         L +  + + V V+   PG+V T+L
Sbjct: 161 A-YCQSKLANVLFTRELARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 46.2 bits (109), Expect = 9e-06
 Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 43/258 (16%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVV--ASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           ++TG++RG+G+A+A+     G  V +   +R  E+   TV E++ N        GGS+  
Sbjct: 8   LVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA-EETVYEIQSN--------GGSA-- 56

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS------IDIWINNAGTNKGFKPLLQFT 168
                    I  ++     V+ L +   NE  +       DI INNAG   G    ++ T
Sbjct: 57  -------FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG--AFIEET 107

Query: 169 NEE-IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 227
            E+  +++VS N        ++A+  +RD  +   I N+  A +   S P    Y  TK 
Sbjct: 108 TEQFFDRMVSVNAKAPFFIIQQALSRLRDNSR---IINISSAAT-RISLPDFIAYSMTKG 163

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL---LLS-------GSTIQNKQMFNIICE 277
            +  +  +L K+     + V+   PG + TD+   LLS        +TI        + +
Sbjct: 164 AINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVED 223

Query: 278 LPETVARTLVPRIRVVKG 295
           + +T A    P  R V G
Sbjct: 224 IADTAAFLASPDSRWVTG 241

Length = 252

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 53/204 (25%), Positives = 76/204 (37%), Gaps = 33/204 (16%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++ G + G+G ALAR F   G RV +ASRS + +      L                   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG----------------- 43

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSID-IWINNAGTNKGFKPLLQFTNEEIEQI 175
             A V   A D+ + A V     FA  E G  D + I  A T  G  P+        +  
Sbjct: 44  -GAPVRTAALDITDEAAVDAF--FA--EAGPFDHVVITAADTPGG--PVRALPLAAAQAA 96

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + +   G+    R A         GG +  + G  +   S     + G+    L  L   
Sbjct: 97  MDSKFWGAYRVARAA-----RIAPGGSLTFVSGFAAVRPS-ASGVLQGAINAALEALARG 150

Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L  E   + V V+T SPG+V T L
Sbjct: 151 LALE--LAPVRVNTVSPGLVDTPL 172

Length = 230

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 35/209 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++ G +RG+G A+ R F+  G  V                             GS  
Sbjct: 7   KKVLVLGGSRGIGAAIVRRFVTDGANVR------------------------FTYAGSKD 42

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A+  G      + AD   + +  V + G++DI + NAG       L    + +I+
Sbjct: 43  AAERLAQETGATAVQTDSADRDAVIDV-VRKSGALDILVVNAGIAVFGDALELDAD-DID 100

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-GGSSTPLT--AVYGSTKCGLR 230
           ++   N+      + EA R M   P+GG I  +   GS  G   P+   A Y ++K  L+
Sbjct: 101 RLFKINIHAPYHASVEAARQM---PEGGRIIII---GSVNGDRMPVAGMAAYAASKSALQ 154

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
            +   L ++     + ++   PG + TD 
Sbjct: 155 GMARGLARDFGPRGITINVVQPGPIDTDA 183

Length = 237

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 21/106 (19%)

Query: 51  AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 110
           AG   +V TG+ RG+G A+A      G  VV          + V    E L       GG
Sbjct: 209 AGKVALV-TGAARGIGAAIAEVLARDGAHVVC---------LDVPAAGEALAAVANRVGG 258

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 156
           ++           +A D+  P    +++       G +DI ++NAG
Sbjct: 259 TA-----------LALDITAPDAPARIAEHLAERHGGLDIVVHNAG 293

Length = 450

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 46/221 (20%), Positives = 71/221 (32%), Gaps = 28/221 (12%)

Query: 60  GSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 119
                +  A+A+     G  VV+ +         V EL + L                 A
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELP----------------A 46

Query: 120 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWIN---NAGTNKGFKPLLQFTNEEIEQIV 176
            V  I  DV    D+ +L      + G ID  ++    +   +  KP L  + E   + +
Sbjct: 47  DV--IPLDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKAL 104

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             +    I   + A  +M    +GG I  +    +     P     G  K  L  L   L
Sbjct: 105 DISAYSFISLAKAAKPLM---NEGGSIVALSYIAAER-VFPGYGGMGVAKAALESLARYL 160

Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 277
             E  R  + V+T S G   T    +GS I          E
Sbjct: 161 AYELGRKGIRVNTISAGPTKT---TAGSGIGGFDKMVEYAE 198

Length = 239

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 6/136 (4%)

Query: 144 EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 203
           E G ID+ +NNAG  +      + T E+   ++ TNL      T++ +  M ++   G I
Sbjct: 78  EVGEIDVLVNNAGITRDVV-FRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRI 135

Query: 204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
            N+            T  Y + K G+     SL +E     V V+T SPG + TD++   
Sbjct: 136 INISSVNGQKGQFGQTN-YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV--- 191

Query: 264 STIQNKQMFNIICELP 279
             I+   +  I+  +P
Sbjct: 192 KAIRPDVLEKIVATIP 207

Length = 246

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 31/216 (14%)

Query: 57  VITGSTRGLGKALAREFLLS----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           ++TG++RG G+ +A+E        G  +V+++R+ E++R    E+            G+ 
Sbjct: 4   LVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI------------GAE 51

Query: 113 KKNLVHAKVAGIACDVCEPADVQKL-----SNFAVNEFGSIDIWINNAGT----NKGFKP 163
           +  L    V  ++ D+   A +++L               + + INNAGT    +KGF  
Sbjct: 52  RSGLR---VVRVSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLGDVSKGFVD 107

Query: 164 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYG 223
           L   T   ++   + NL   +  T   ++  +D P          +          A+Y 
Sbjct: 108 LSDSTQ--VQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYC 165

Query: 224 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           + K     L   L  E K   V V   +PG++ TD+
Sbjct: 166 AGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM 201

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 28/209 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEG---MMAAGG 110
             V+ITG + G+G  LA    L+ D          S R  V     +LK+      AAG 
Sbjct: 1   TVVLITGCSSGIGLHLA--VRLASD---------PSKRFKVYATMRDLKKKGRLWEAAGA 49

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFT 168
            +   L   ++     DVC+   V      AV       +D+ + NAG      PL   +
Sbjct: 50  LAGGTLETLQL-----DVCDSKSVAA----AVERVTERHVDVLVCNAGVGL-LGPLEALS 99

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
            + +  +   N+ G++   +  +  M+ +   G I      G G    P   VY ++K  
Sbjct: 100 EDAMASVFDVNVFGTVRMLQAFLPDMKRR-GSGRILVTSSVG-GLQGLPFNDVYCASKFA 157

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLT 257
           L  L  SL  +     V +     G V T
Sbjct: 158 LEGLCESLAVQLLPFNVHLSLIECGPVHT 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 42.9 bits (102), Expect = 6e-05
 Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 22/132 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDR-VVVASRS---SESVRMTVTELEENLKEGMMAAGGS 111
            +ITG   GLG+ALAR     G R +V+ SRS   +      + ELE             
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAG---------- 52

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                  A+V  +ACDV +   +  +        G +   I+ AG       L   T E 
Sbjct: 53  -------ARVTVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLD-DGVLASLTPER 104

Query: 172 IEQIVSTNLVGS 183
              +++    G+
Sbjct: 105 FAAVLAPKAAGA 116

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 43.8 bits (103), Expect = 6e-05
 Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 23/183 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + +++TG+++GLG+ +A+ +  +G  V++ +R  + +        E + + ++ AG    
Sbjct: 7   KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL--------EKVYDAIVEAG---- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVN---EF-GSIDIWINNAGTNKGFKPLLQFTN 169
               H +   I  D+    + ++   FA        G +D  ++ AG      PL   T 
Sbjct: 55  ----HPEPFAIRFDLMSAEE-KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTV 109

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
            E       N V  +  TR    +++  P    IF   G   G +       +G++K  L
Sbjct: 110 AEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFV--GESHGETPKAYWGGFGASKAAL 167

Query: 230 RQL 232
             L
Sbjct: 168 NYL 170

Length = 239

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           V+TG   GLG+ +A         + +A    + V + + E  E + E + A G       
Sbjct: 14  VVTGCDTGLGQGMA---------LGLAEAGCDIVGINIVEPTETI-EQVTALG------- 56

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              +   +  D+ +   +  L   AV EFG IDI +NNAG  +  +  ++F+ ++ + ++
Sbjct: 57  --RRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRR-EDAIEFSEKDWDDVM 113

Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQA 234
           + N+      ++ A +    Q  GG I N+    S  GG   P    Y ++K G+  +  
Sbjct: 114 NLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTR 170

Query: 235 SLFKESKRSKVGVHTASPGMVLTD 258
            +  E  +  + V+  +PG + T+
Sbjct: 171 LMANEWAKHNINVNAIAPGYMATN 194

Length = 253

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 28/206 (13%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            + ++ITG+  G G+ +A      G  V+   + +  V    T L           G + 
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV----TALRAEAAR----RGLA- 52

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                   +     D+ +  D  + + +       +D+ +NNAG  +    ++    E +
Sbjct: 53  --------LRVEKLDLTDAIDRAQAAEW------DVDVLLNNAGIGEA-GAVVDIPVELV 97

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST-PLTAVYGSTKCGLRQ 231
            ++  TN+ G +  T+  +R M  + KG  +F    +   G  T P T  Y ++K  L  
Sbjct: 98  RELFETNVFGPLELTQGFVRKMVARGKGKVVFT---SSMAGLITGPFTGAYCASKHALEA 154

Query: 232 LQASLFKESKRSKVGVHTASPGMVLT 257
           +  ++  E K   + V T +PG  LT
Sbjct: 155 IAEAMHAELKPFGIQVATVNPGPYLT 180

Length = 257

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 46/225 (20%), Positives = 71/225 (31%), Gaps = 59/225 (26%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            R  +I G++RGLG  L    L  G +V    R  +         +  L+          
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ--------DTALQA--------- 43

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAG-TNKGFKPLLQFTNE 170
                   + G+  +  +  D   L        G   D+   NAG +    +     T  
Sbjct: 44  --------LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAA 95

Query: 171 EIEQIVSTNLVGSI-LCTREAMRVMRDQ---------------PKGGHIFNMDGAGSGGS 214
           EI Q+  TN +  I L  R   +V   Q               P GG +           
Sbjct: 96  EIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEM----------- 144

Query: 215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
                 +Y ++K  L  +  S   E     + V +  PG V TD+
Sbjct: 145 -----PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184

Length = 225

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 20/126 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG   G+G A++      G   V+  RS+        E  E L+    A    ++  
Sbjct: 10  VIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-----EFAEELR----ALQPRAEF- 59

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  D+ + A  +      V +FG ID  +NNAG N G    L+   E     
Sbjct: 60  --------VQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG--LEAGREAFVAS 109

Query: 176 VSTNLV 181
           +  NL+
Sbjct: 110 LERNLI 115

Length = 258

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 26/125 (20%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  V+TG+  GLG   A      G  VV+A R              NL +G  AA   + 
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVR--------------NLDKGKAAAARITA 62

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--------TNKGFKPLL 165
                A V     D+   A V+  ++     +  ID+ INNAG        T  GF+  L
Sbjct: 63  AT-PGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFE--L 119

Query: 166 QF-TN 169
           QF TN
Sbjct: 120 QFGTN 124

Length = 306

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 40.2 bits (95), Expect = 5e-04
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            ++TG   GLG  LAR     G R +V+ SRS          L E      + A G    
Sbjct: 3   YLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAE------LEARG---- 52

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
               A+V  +ACDV +   V+ L      +   +   I+ AG  +    L   T E+  +
Sbjct: 53  ----AEVTVVACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLR-DALLANMTAEDFAR 107

Query: 175 IVSTNLVGS 183
           +++  + G+
Sbjct: 108 VLAPKVTGA 116

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 40.3 bits (94), Expect = 8e-04
 Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 24/208 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG++RG+G+A+A      G  + V   S        ++ E  +   + A GG+++  
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEICVHYHSGR------SDAESVVSA-IQAQGGNAR-- 51

Query: 116 LVHAKVAG-IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEI 172
           L+   VA  +AC     AD+         E G+    + NAG  +   F  L   + E+ 
Sbjct: 52  LLQFDVADRVACRTLLEADIA--------EHGAYYGVVLNAGITRDAAFPAL---SEEDW 100

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + ++ TNL G           M    +GG I  +    SG         Y + K GL   
Sbjct: 101 DIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASV-SGVMGNRGQVNYSAAKAGLIGA 159

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             +L  E  + K+ V+  +PG++ T++L
Sbjct: 160 TKALAVELAKRKITVNCIAPGLIDTEML 187

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 70/288 (24%), Positives = 107/288 (37%), Gaps = 56/288 (19%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSS 112
           ++V+ITG + G+G   A E    G RV+ A R  + V RM                    
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFT-------------- 48

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-----GSIDIWINNAGTNKGFKPLLQF 167
                     GI  D+ +P  V++    A +E        +    NNAG    + PL   
Sbjct: 49  ----------GILLDLDDPESVER----AADEVIALTDNRLYGLFNNAGFGV-YGPLSTI 93

Query: 168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 227
           + +++EQ  STN  G+   T   +  M    +G  +  M  +  G  STP    Y ++K 
Sbjct: 94  SRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIV--MTSSVMGLISTPGRGAYAASKY 151

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS-GSTIQNKQMFNIICELPETVARTL 286
            L     +L  E + S + V    PG + T    +   T  +K + N     P   AR  
Sbjct: 152 ALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVEN-----PGIAARFT 206

Query: 287 VPRIRVVKGSGKAINYLTPPR-------ILLALVTAWLRR---GRWFD 324
           +    VV    K  + L  P+        L+      L+R   GR  D
Sbjct: 207 LGPEAVVP---KLRHALESPKPKLRYPVTLVTHAVMVLKRLLPGRMMD 251

Length = 256

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 40.3 bits (94), Expect = 9e-04
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 2/107 (1%)

Query: 146 GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 205
           G+ID+ ++N    +   P+   +  +I Q      +      + A+  M+    G  IF 
Sbjct: 71  GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQMKKAGGGSIIFI 130

Query: 206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASP 252
                         ++YG  +     L  SL KE  R  + V+   P
Sbjct: 131 TSAVPKKP--LAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGP 175

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 32/142 (22%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAA-- 108
           ++V+ITG+T  LGK L  + L S     ++ +  R            EE L+E +     
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQS-----AEERLRELLKDKLF 55

Query: 109 -GGSSKKNLVHAKVAGIACDVCEP------ADVQKLSNFAVNEFGSIDIWINNAGTNKGF 161
             G +   L  +K+  I  D+ EP       D+Q L          ++I I+ A T    
Sbjct: 56  DRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIE-------EVNIIIHCAAT---- 104

Query: 162 KPLLQFTNEEIEQIVSTNLVGS 183
              + F +E +++ +S N++G+
Sbjct: 105 ---VTF-DERLDEALSINVLGT 122

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 26/139 (18%)

Query: 55  NVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
            VVITG++ GLG A A+     G+  VV+A R            E+  +E  M     S 
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKA-------EQAAQEVGMPKDSYS- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF----GSIDIWINNAGTNKGFKPLLQFTN 169
                          C+ A +  +  F V+ F      +D  + NA          +FT 
Sbjct: 55  ------------VLHCDLASLDSVRQF-VDNFRRTGRPLDALVCNAAVYLPTAKEPRFTA 101

Query: 170 EEIEQIVSTNLVGSILCTR 188
           +  E  V  N +G  L T 
Sbjct: 102 DGFELTVGVNHLGHFLLTN 120

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 15/102 (14%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE--ENLKEGMMAAGGSSKK 114
           ++ G+TRG G+ +A E   +G  V V  RS+ + R      E  E   E + AAGG    
Sbjct: 12  LVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR--- 68

Query: 115 NLVHAKVAGIA--CDVCEPADVQKLSNFAVNEFGSIDIWINN 154
                   GIA   D   P  V+ L      E G +DI +N+
Sbjct: 69  --------GIAVQVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R +++TG+  G+G+  A  +   G  V++  R       T  +LE    E + AAG    
Sbjct: 13  RIILVTGAGDGIGREAALTYARHGATVILLGR-------TEEKLEAVYDE-IEAAG---- 60

Query: 114 KNLVHAKVAGIACDV--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                 + A I  D+    P + Q+L++    +FG +D  ++NAG      P+ Q   E 
Sbjct: 61  ----GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEV 116

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 213
            + ++  N+  + + T+  + ++   P    +F     G  G
Sbjct: 117 WQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG 158

Length = 247

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 16/90 (17%)

Query: 49  CKAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMA 107
                   +ITG   GLG  +AR     G R +V+ SR   + R                
Sbjct: 146 PGGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALL-------R 198

Query: 108 AGGSSKKNLVHAKVAGIACDVCEPADVQKL 137
           AGG        A+V+ + CDV +PA +  L
Sbjct: 199 AGG--------ARVSVVRCDVTDPAALAAL 220

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 23/163 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSS 112
           + +VI+G TRG+GKA+  EF  SG  +     S+         +LE+             
Sbjct: 9   KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG---------- 58

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA-----GTNKGFKPLLQF 167
                  K      ++ EP   ++L      +F  +D +I+NA         G+   ++ 
Sbjct: 59  ------IKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRL 112

Query: 168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 210
             + +  I +  +   ++  +EA + M ++  GG I ++   G
Sbjct: 113 KPKGLNNIYTATVNAFVVGAQEAAKRM-EKVGGGSIISLSSTG 154

Length = 260

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 37.9 bits (89), Expect = 0.003
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 42/148 (28%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           +++ G+T  +G A+A+     G  V+ A RSS                            
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGDY------------------------- 35

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      D+ + A ++ L  F   + G  D  ++ AG  + F PL + T+ + ++ 
Sbjct: 36  ---------QVDITDEASIKAL--FE--KVGHFDAIVSTAGDAE-FAPLAELTDADFQRG 81

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHI 203
           +++ L+G I   R  +  + D   GG I
Sbjct: 82  LNSKLLGQINLVRHGLPYLND---GGSI 106

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 47/213 (22%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG+T G+GK LA ++   G +V+   R+       + EL                  
Sbjct: 4   VLITGATSGIGKQLALDYAKQGWQVIACGRNQS----VLDELHT---------------- 43

Query: 116 LVHAKVAGIACDVCE-PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI-- 172
              A +  +A DV + P     LS          ++WI NAG         ++ ++    
Sbjct: 44  -QSANIFTLAFDVTDHPGTKAALSQLPFIP----ELWIFNAGD-------CEYMDDGKVD 91

Query: 173 ----EQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTK 226
                ++ + N++G   C  E +     QP    GH   + G+ +   + P    YG++K
Sbjct: 92  ATLMARVFNVNVLGVANCI-EGI-----QPHLSCGHRVVIVGSIASELALPRAEAYGASK 145

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
             +     +L  + +   + V T  PG V T L
Sbjct: 146 AAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178

Length = 240

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 97
          ++ITG T  +G+AL +     G  V + +RS      T  E 
Sbjct: 1  ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEG 42

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	388
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.98
PRK07102	243	short chain dehydrogenase; Provisional	99.98
PRK10538	248	malonic semialdehyde reductase; Provisional	99.98
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07201	657	short chain dehydrogenase; Provisional	99.98
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.98
PRK06914	280	short chain dehydrogenase; Provisional	99.98
PRK07775	274	short chain dehydrogenase; Provisional	99.98
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK09134	258	short chain dehydrogenase; Provisional	99.97
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09135	249	pteridine reductase; Provisional	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.95
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.95
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.93
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
PRK06720	169	hypothetical protein; Provisional	99.84
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.83
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.82
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.81
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.79
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.78
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.76
PLN02583	297	cinnamoyl-CoA reductase	99.75
PLN02653	340	GDP-mannose 4,6-dehydratase	99.75
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.73
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.71
PLN02572	442	UDP-sulfoquinovose synthase	99.7
PLN02650	351	dihydroflavonol-4-reductase	99.7
PLN00198	338	anthocyanidin reductase; Provisional	99.7
PLN02240	352	UDP-glucose 4-epimerase	99.69
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.69
PLN02214	342	cinnamoyl-CoA reductase	99.68
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.68
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.66
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.65
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.63
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.61
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.61
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.6
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.59
PLN02686	367	cinnamoyl-CoA reductase	99.59
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.58
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.57
PLN02427	386	UDP-apiose/xylose synthase	99.51
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.5
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.48
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.46
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.45
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.45
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.45
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.43
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.41
PLN02260	668	probable rhamnose biosynthetic enzyme	99.4
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.4
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.39
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.38
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.38
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.36
PLN02206	442	UDP-glucuronate decarboxylase	99.35
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.35
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.33
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.32
CHL00194	317	ycf39 Ycf39; Provisional	99.31
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.31
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.3
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.28
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.2
PLN02996	491	fatty acyl-CoA reductase	99.18
PRK07201	657	short chain dehydrogenase; Provisional	99.18
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.17
PRK05865	854	hypothetical protein; Provisional	99.17
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.11
PLN02778	298	3,5-epimerase/4-reductase	99.09
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.06
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.05
PRK08309	177	short chain dehydrogenase; Provisional	99.04
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.04
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.01
PLN02503	605	fatty acyl-CoA reductase 2	98.97
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.97
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.93
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.87
PLN02260	668	probable rhamnose biosynthetic enzyme	98.83
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.83
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.75
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.69
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.63
PLN00016	378	RNA-binding protein; Provisional	98.63
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.58
PRK12320	699	hypothetical protein; Provisional	98.58
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.58
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.54
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.53
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.5
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.44
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.35
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.34
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.22
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.19
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.13
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.13
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.1
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.02
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.98
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.97
COG2910	211	Putative NADH-flavin reductase [General function p	97.9
PRK09620	229	hypothetical protein; Provisional	97.83
PRK14982	340	acyl-ACP reductase; Provisional	97.82
PLN00106	323	malate dehydrogenase	97.81
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.72
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.72
PTZ00325	321	malate dehydrogenase; Provisional	97.58
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.55
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.55
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.51
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.51
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.43
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.4
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.36
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.35
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.3
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.24
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.23
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.21
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.17
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.16
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.14
PRK06849	389	hypothetical protein; Provisional	97.12
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.1
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.09
KOG2774	366	consensus NAD dependent epimerase [General functio	97.08
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.04
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.04
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.02
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.02
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.02
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.0
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.99
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.99
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.98
COG3268	382	Uncharacterized conserved protein [Function unknow	96.97
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.96
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.95
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.89
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.88
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.85
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.84
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.82
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.81
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.81
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.79
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.77
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.7
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.69
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.68
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.61
PRK05086	312	malate dehydrogenase; Provisional	96.59
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.54
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.53
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.52
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.52
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.48
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.47
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.46
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.45
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.43
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.41
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.4
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.39
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.38
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.38
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.35
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.34
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.31
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.31
PTZ00117	319	malate dehydrogenase; Provisional	96.27
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.26
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.25
PRK14968	188	putative methyltransferase; Provisional	96.24
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.23
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.22
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.2
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.16
PRK08328	231	hypothetical protein; Provisional	96.14
PRK08223	287	hypothetical protein; Validated	96.1
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.07
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.05
PLN00203	519	glutamyl-tRNA reductase	96.05
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.04
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.04
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.01
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.99
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.98
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.93
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.93
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.9
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.89
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.87
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.87
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.86
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.76
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.76
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.74
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.71
PRK09496	453	trkA potassium transporter peripheral membrane com	95.7
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.63
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.63
PLN02602	350	lactate dehydrogenase	95.63
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.61
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.6
PRK04148	134	hypothetical protein; Provisional	95.55
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.53
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.51
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.47
PRK05442	326	malate dehydrogenase; Provisional	95.47
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.43
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.43
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.42
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.42
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.4
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.38
PLN02740	381	Alcohol dehydrogenase-like	95.38
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.37
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.33
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.24
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.21
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.18
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.1
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.09
PRK14851	679	hypothetical protein; Provisional	95.08
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.06
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.04
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.03
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.03
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.01
PRK06223	307	malate dehydrogenase; Reviewed	95.0
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.0
PRK09496	453	trkA potassium transporter peripheral membrane com	94.99
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.97
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.96
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.93
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.9
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.88
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.85
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.84
PRK10669	558	putative cation:proton antiport protein; Provision	94.83
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.81
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	94.8
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.79
PLN02494	477	adenosylhomocysteinase	94.79
PTZ00354	334	alcohol dehydrogenase; Provisional	94.76
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.75
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.72
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.71
PRK12480	330	D-lactate dehydrogenase; Provisional	94.67
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.63
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.63
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.61
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.61
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.58
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.58
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.58
PRK07411	390	hypothetical protein; Validated	94.52
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.51
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.51
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.43
PRK07877	722	hypothetical protein; Provisional	94.42
PRK14030	445	glutamate dehydrogenase; Provisional	94.41
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.41
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	94.37
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.35
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.34
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.32
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.32
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	94.31
PLN02827	378	Alcohol dehydrogenase-like	94.31
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.3
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.29
PRK14852	989	hypothetical protein; Provisional	94.24
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.19
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.18
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.15
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.1
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.02
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.01
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	94.0
PLN02928	347	oxidoreductase family protein	93.98
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	93.98
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	93.96
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.95
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	93.94
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.91
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.79
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	93.79
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	93.78

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.3e-44  Score=330.98  Aligned_cols=224  Identities=25%  Similarity=0.400  Sum_probs=203.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ...+|+++|||||+|||+++|++|+++|++|++++|++++++++.++++.+                .+.+++++++|++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~----------------~~v~v~vi~~DLs   66 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK----------------TGVEVEVIPADLS   66 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh----------------hCceEEEEECcCC
Confidence            457899999999999999999999999999999999999999999999875                3468999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +++++.++.+++.++.++||+||||||+.. ++++.+.+.++.++++++|+.+.+.++++++|.|.++ +.|+||||+|.
T Consensus        67 ~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~  144 (265)
T COG0300          67 DPEALERLEDELKERGGPIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSA  144 (265)
T ss_pred             ChhHHHHHHHHHHhcCCcccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEech
Confidence            999999999999999899999999999988 7999999999999999999999999999999999998 68999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.|..+.|++||+++.+|+++|+.|+.++||+|.+|+||+|.|+++................++|+++|+..+..
T Consensus       145 -ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         145 -AGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             -hhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHH
Confidence             8999999999999999999999999999999999999999999999999862222222222345567899999999988


Q ss_pred             hhh
Q 016493          290 IRV  292 (388)
Q Consensus       290 ~~~  292 (388)
                      +..
T Consensus       224 l~~  226 (265)
T COG0300         224 LEK  226 (265)
T ss_pred             Hhc
Confidence            764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=7.9e-44  Score=319.73  Aligned_cols=226  Identities=28%  Similarity=0.382  Sum_probs=201.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+++|+++|||||||||.++|++|++.|++|++++|+.++++++++++.+                   ..+.++..|++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-------------------~~~~~~~~DVt   63 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-------------------GAALALALDVT   63 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-------------------CceEEEeeccC
Confidence            46789999999999999999999999999999999999999999888742                   46889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++.+.++|+++|+||||||... ..++.+.+.++|++|+++|+.|.++.+++++|.|.++ +.|+|||+||+
T Consensus        64 D~~~~~~~i~~~~~~~g~iDiLvNNAGl~~-g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~Si  141 (246)
T COG4221          64 DRAAVEAAIEALPEEFGRIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSI  141 (246)
T ss_pred             CHHHHHHHHHHHHHhhCcccEEEecCCCCc-CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccc
Confidence            999999999999999999999999999998 5999999999999999999999999999999999999 57899999999


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-----hhhhhhhhhccCHHHHHH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQMFNIICELPETVAR  284 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~pe~vA~  284 (388)
                       ++..++|+.+.|++||+++.+|++.|+.|+.+++|||.+|+||.+.|..+......     ...........+|+++|+
T Consensus       142 -AG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~  220 (246)
T COG4221         142 -AGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAE  220 (246)
T ss_pred             -cccccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHH
Confidence             89999999999999999999999999999999999999999999977655442222     111123344568999999


Q ss_pred             HHhhhhhhccccc
Q 016493          285 TLVPRIRVVKGSG  297 (388)
Q Consensus       285 ~~l~~~~~~~~~~  297 (388)
                      .++..+..|+.+.
T Consensus       221 ~V~~~~~~P~~vn  233 (246)
T COG4221         221 AVLFAATQPQHVN  233 (246)
T ss_pred             HHHHHHhCCCccc
Confidence            9999888887654

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2e-42  Score=321.47  Aligned_cols=197  Identities=26%  Similarity=0.424  Sum_probs=183.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..++.||+|+|||||+|||+++|++|+++|++++++.|+.++++...+++++..+.               .++++++||
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~---------------~~v~~~~~D   71 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSL---------------EKVLVLQLD   71 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCc---------------CccEEEeCc
Confidence            45679999999999999999999999999999999999999999998999886432               269999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++++.++||++|+||||||+.. .....+.+.++++.+|++|++|++.++|+++|+|++++ .|+||++|
T Consensus        72 vs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvis  149 (282)
T KOG1205|consen   72 VSDEESVKKFVEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVIS  149 (282)
T ss_pred             cCCHHHHHHHHHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEe
Confidence            99999999999999999999999999999988 78888999999999999999999999999999999985 89999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccccccccC
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~g--I~vn~v~PG~v~T~~~~~~  263 (388)
                      |+ ++..+.|..+.|++||+|+.+|+++|+.|+.+.+  |++ +|+||+|+|++....
T Consensus       150 Si-aG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  150 SI-AGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             cc-ccccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            99 8999999999999999999999999999999977  566 999999999977543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.5e-43  Score=304.05  Aligned_cols=244  Identities=21%  Similarity=0.298  Sum_probs=212.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      -+++.|.++||||++|||+++++.|+++|++|++.+++.+..++.+..|..                  ......+.||+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g------------------~~~h~aF~~DV   71 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG------------------YGDHSAFSCDV   71 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC------------------CCccceeeecc
Confidence            356779999999999999999999999999999999999888877776532                  13566799999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~Iv~is  207 (388)
                      ++.++++..+++..+.+|++++||||||+.. ...+..+..++|+..+.+|+.|.|+++|++...|... .++++|||+|
T Consensus        72 S~a~~v~~~l~e~~k~~g~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvs  150 (256)
T KOG1200|consen   72 SKAHDVQNTLEEMEKSLGTPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVS  150 (256)
T ss_pred             CcHHHHHHHHHHHHHhcCCCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeeh
Confidence            9999999999999999999999999999988 6888999999999999999999999999999985443 3456999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |+ .+..+.-+...|++||+++.+|+++.++|++.++||||.|+||+|.|||....++....          +-+.-.++
T Consensus       151 SI-VGkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~----------ki~~~iPm  219 (256)
T KOG1200|consen  151 SI-VGKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLD----------KILGMIPM  219 (256)
T ss_pred             hh-hcccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHH----------HHHccCCc
Confidence            99 78888889999999999999999999999999999999999999999998654432211          11222457


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .|++.+||+++.+.||+||...+++++.+-.+|++
T Consensus       220 gr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  220 GRLGEAEEVANLVLFLASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             cccCCHHHHHHHHHHHhccccccccceeEEEeccc
Confidence            88999999999999999999999999888777765

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.3e-41  Score=309.68  Aligned_cols=224  Identities=24%  Similarity=0.346  Sum_probs=202.0

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ++..+.+|++||||||++|||+++|++|+++|+++++.|.|.+..++..+++++                 . ++++.+.
T Consensus        31 ~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~-----------------~-g~~~~y~   92 (300)
T KOG1201|consen   31 KPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRK-----------------I-GEAKAYT   92 (300)
T ss_pred             cchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHh-----------------c-CceeEEE
Confidence            366789999999999999999999999999999999999999999999988875                 2 3799999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      ||++|++++.+.++++++++|.+|+||||||+.. ..++.+.+.+++++++++|+.|++.++|+|+|.|.++ +.|+||+
T Consensus        93 cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~  170 (300)
T KOG1201|consen   93 CDISDREEIYRLAKKVKKEVGDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVT  170 (300)
T ss_pred             ecCCCHHHHHHHHHHHHHhcCCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEE
Confidence            9999999999999999999999999999999988 7889999999999999999999999999999999998 6899999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ++|+ ++..+.++...||+||+|+.+|.++|..|+.   .+||+...|||++++|.|... . .....+.+  ..+|+++
T Consensus       171 IaS~-aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~-~-~~~~~l~P--~L~p~~v  245 (300)
T KOG1201|consen  171 IASV-AGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG-A-TPFPTLAP--LLEPEYV  245 (300)
T ss_pred             ehhh-hcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC-C-CCCccccC--CCCHHHH
Confidence            9999 8999999999999999999999999999986   467999999999999999876 2 12222222  3489999


Q ss_pred             HHHHhhhhhhcc
Q 016493          283 ARTLVPRIRVVK  294 (388)
Q Consensus       283 A~~~l~~~~~~~  294 (388)
                      |+.+++.+...+
T Consensus       246 a~~Iv~ai~~n~  257 (300)
T KOG1201|consen  246 AKRIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHHHcCC
Confidence            999999887543

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=320.45  Aligned_cols=251  Identities=18%  Similarity=0.203  Sum_probs=210.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++++|+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv   67 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE----------------SNVDVSYIVADL   67 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCceEEEEecC
Confidence            4578999999999999999999999999999999999999888877776542                134688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++. ++|++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.|+||++||
T Consensus        68 ~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS  144 (263)
T PRK08339         68 TKREDLERTVKELK-NIGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTS  144 (263)
T ss_pred             CCHHHHHHHHHHHH-hhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence            99999999999985 6899999999999866 5778899999999999999999999999999999877 4689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH-----HH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-----VA  283 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-----vA  283 (388)
                      . ++..+.+....|+++|+|+.+|+++++.|++++|||||+|+||+|+|++.........    .....++++     ..
T Consensus       145 ~-~~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~~~~~  219 (263)
T PRK08339        145 V-AIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRA----KREGKSVEEALQEYAK  219 (263)
T ss_pred             c-cccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhh----hccCCCHHHHHHHHhc
Confidence            8 5777888899999999999999999999999999999999999999997532110000    000011111     12


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..+++++..|++++..+.||+++...+.++..+..||++.
T Consensus       220 ~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~  259 (263)
T PRK08339        220 PIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRL  259 (263)
T ss_pred             cCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcc
Confidence            2356678889999999999999988888888888888764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.5e-41  Score=317.16  Aligned_cols=263  Identities=14%  Similarity=0.166  Sum_probs=208.8

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.++.                +.. .++++|
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~----------------~~~-~~~~~D   63 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL----------------GSD-YVYELD   63 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc----------------CCc-eEEEec
Confidence            4678999999997  89999999999999999999999853 233333333221                123 568999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.++++++++++|.|++   +|+||
T Consensus        64 v~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv  140 (274)
T PRK08415         64 VSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVL  140 (274)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEE
Confidence            999999999999999999999999999998542   256788999999999999999999999999999974   37999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.+.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... . ...      .......
T Consensus       141 ~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~-~~~------~~~~~~~  211 (274)
T PRK08415        141 TLSYL-GGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-F-RMI------LKWNEIN  211 (274)
T ss_pred             EEecC-CCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-h-hHH------hhhhhhh
Confidence            99987 6777888889999999999999999999999999999999999999987432111 0 000      0001123


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccccccchh-ccchhhhhccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALY-AAEADRIRNWA  342 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~w~  342 (388)
                      .++++...|++++..+.||+++...+.++..+..||++.....+... ++..+....|.
T Consensus       212 ~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~  270 (274)
T PRK08415        212 APLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNIMGMGAVEKEEDGKTVLAWD  270 (274)
T ss_pred             CchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccccCCCccccccCCceEEeee
Confidence            45677888999999999999999999999999999998543333332 22334444464

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-41  Score=312.56  Aligned_cols=246  Identities=21%  Similarity=0.283  Sum_probs=205.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||+++|++|+++|++|++++|+..  ++..+++++                 .+.++.++++|+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~~Dl   64 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA-----------------LGRKFHFITADL   64 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH-----------------cCCeEEEEEeCC
Confidence            4678999999999999999999999999999999998643  223333322                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.+|++|++|||||+.. ..++.+.++++|++++++|+.+++.++++++|.|++++.+|+||++||
T Consensus        65 ~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS  143 (251)
T PRK12481         65 IQQKDIDSIVSQAVEVMGHIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIAS  143 (251)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence            9999999999999999999999999999876 577888999999999999999999999999999987645689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ..+...+.+.+
T Consensus       144 ~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~--~~~------~~~~~~~~p~~  214 (251)
T PRK12481        144 M-LSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD--TAR------NEAILERIPAS  214 (251)
T ss_pred             h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC--hHH------HHHHHhcCCCC
Confidence            8 66777788899999999999999999999999999999999999999986432110  000      01112233556


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++..|++++..+.||+++...+.++..+..||++.
T Consensus       215 ~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        215 RWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             CCcCHHHHHHHHHHHhCccccCcCCceEEECCCEe
Confidence            77889999999999999988888888888888763

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.4e-41  Score=312.49  Aligned_cols=241  Identities=15%  Similarity=0.139  Sum_probs=199.6

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.                   ..++.+++||
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~-------------------~~~~~~~~~D   63 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV-------------------DEEDLLVECD   63 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc-------------------cCceeEEeCC
Confidence            3679999999999  8999999999999999999999983 4433333321                   1357889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|+++++++++++.+++|++|+||||||+..+   .+++.+.+.++|++++++|+.+++.++++++|.|++   +|+||
T Consensus        64 l~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv  140 (252)
T PRK06079         64 VASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIV  140 (252)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEE
Confidence            999999999999999999999999999998642   257788999999999999999999999999999963   48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.+.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.......  ....      .+...+
T Consensus       141 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~--~~~~------~~~~~~  211 (252)
T PRK06079        141 TLTYF-GSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH--KDLL------KESDSR  211 (252)
T ss_pred             EEecc-CccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh--HHHH------HHHHhc
Confidence            99987 66777888999999999999999999999999999999999999999975432110  0000      111223


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++++..|+|++..+.||+++...+.++..+..||++
T Consensus       212 ~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        212 TVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             CcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            35677888999999999999998888888888777765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.4e-40  Score=311.04  Aligned_cols=257  Identities=29%  Similarity=0.429  Sum_probs=209.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..+++||+++|||+++|||+++|++|++.|++|++++|+++++++..+++.....              .+.++..+.||
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D   68 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY--------------TGGKVLAIVCD   68 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--------------CCCeeEEEECc
Confidence            3578999999999999999999999999999999999999999988888765321              24679999999


Q ss_pred             CCCHHHHHHHHHHHHhh-cCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchH-HHHHHHHHHHHHHcCCCCcEEEE
Q 016493          128 VCEPADVQKLSNFAVNE-FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG-SILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g-~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      ++++++++++++...++ +|++|+||||||......++.+.++++|++++++|+.| .+.+.+.+.|.++++ ++|+|++
T Consensus        69 v~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-~gg~I~~  147 (270)
T KOG0725|consen   69 VSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-KGGSIVN  147 (270)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-CCceEEE
Confidence            99999999999999998 79999999999998755579999999999999999996 555555555555554 6899999


Q ss_pred             ecCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-hhhhhhhhhccCHHHHH
Q 016493          206 MDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICELPETVA  283 (388)
Q Consensus       206 isS~~~~~~~~~~~-~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~pe~vA  283 (388)
                      +||. ++..+.+.. ..|++||+|+.+|+|+||.||+++|||||+|+||.|.|++....... ....+...    .+.-.
T Consensus       148 ~ss~-~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~----~~~~~  222 (270)
T KOG0725|consen  148 ISSV-AGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEA----TDSKG  222 (270)
T ss_pred             Eecc-ccccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhh----hcccc
Confidence            9988 555554444 79999999999999999999999999999999999999982111110 00111000    00112


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ..++.++..|++++..+.||+++...+.+++.+..||+...
T Consensus       223 ~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  223 AVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             ccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEEe
Confidence            34578899999999999999999877999999999998754

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-40  Score=308.94  Aligned_cols=245  Identities=25%  Similarity=0.387  Sum_probs=207.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++..+++|+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   67 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT-----------------SGGKVVPVCCDV   67 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEEccC
Confidence            357899999999999999999999999999999999999888887777654                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|.+++++|+|+++||
T Consensus        68 ~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  146 (253)
T PRK05867         68 SQHQQVTSMLDQVTAELGGIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTAS  146 (253)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECc
Confidence            9999999999999999999999999999876 577888999999999999999999999999999987755689999988


Q ss_pred             CCCCCC-CCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          209 AGSGGS-STP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~-~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      . ++.. ..+ ....|++||+|+++|++++++|++++||+||+|+||+|+|++...... ..          .....+.+
T Consensus       147 ~-~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~-~~----------~~~~~~~~  214 (253)
T PRK05867        147 M-SGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE-YQ----------PLWEPKIP  214 (253)
T ss_pred             H-HhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH-HH----------HHHHhcCC
Confidence            7 3332 223 457899999999999999999999999999999999999998643211 00          11112234


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++++..|++++..+.||+++...+.+|+.+..||+|.
T Consensus       215 ~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        215 LGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             CCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence            5677788899999999999988888998888888874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-40  Score=312.85  Aligned_cols=244  Identities=16%  Similarity=0.171  Sum_probs=198.9

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+.+..++ .+++.++                .+. ...+++|
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~----------------~g~-~~~~~~D   65 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAES----------------LGS-DFVLPCD   65 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHh----------------cCC-ceEEeCC
Confidence            46899999999996  99999999999999999999998643332 3333221                111 3468999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|.++++++++++.+++|++|+||||||+...   ..++.+.+.++|++++++|+.++++++|+++|+|++   +|+||
T Consensus        66 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv  142 (271)
T PRK06505         66 VEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSML  142 (271)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEE
Confidence            999999999999999999999999999998642   146778999999999999999999999999999973   48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.|.+..|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.......  ....      ......
T Consensus       143 ~isS~-~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~--~~~~------~~~~~~  213 (271)
T PRK06505        143 TLTYG-GSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDA--RAIF------SYQQRN  213 (271)
T ss_pred             EEcCC-CccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcch--HHHH------HHHhhc
Confidence            99987 56778888999999999999999999999999999999999999999975321110  0000      000112


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+++++..|++++..+.||+++...+.++..+..||++.
T Consensus       214 ~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        214 SPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             CCccccCCHHHHHHHHHHHhCccccccCceEEeecCCcc
Confidence            345677788999999999999988888999999988874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.8e-40  Score=308.49  Aligned_cols=246  Identities=16%  Similarity=0.172  Sum_probs=201.7

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      ++++||+++||||+  +|||+++|++|+++|++|++.+|+.+  +.++..+++.+.                 ..++.++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~   64 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP-----------------LNPSLFL   64 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc-----------------cCcceEe
Confidence            45789999999986  89999999999999999999877643  334444444331                 1246688


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      ++|++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|++++++|+.+++.++++++|.|++   +|
T Consensus        65 ~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g  141 (258)
T PRK07370         65 PCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GG  141 (258)
T ss_pred             ecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CC
Confidence            999999999999999999999999999999998531   257788999999999999999999999999999974   48


Q ss_pred             EEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          202 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       202 ~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                      +||++||. ++..+.+++..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... .. ...      .+.
T Consensus       142 ~Iv~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~~-~~~------~~~  212 (258)
T PRK07370        142 SIVTLTYL-GGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-IL-DMI------HHV  212 (258)
T ss_pred             eEEEEecc-ccccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-ch-hhh------hhh
Confidence            99999997 6777888999999999999999999999999999999999999999997532110 00 000      011


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ....++.++..|+|++..+.||+++...+.++..+..||++.
T Consensus       213 ~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        213 EEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC  254 (258)
T ss_pred             hhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCccc
Confidence            123356678889999999999999999888888888888763

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-40  Score=307.70  Aligned_cols=249  Identities=17%  Similarity=0.208  Sum_probs=201.8

Q ss_pred             hhcccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEE
Q 016493           45 LEEHCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  122 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  122 (388)
                      |...++++||+++||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.++.                 ....
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~-----------------~~~~   63 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEEL-----------------DAPI   63 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhh-----------------ccce
Confidence            344567899999999998  59999999999999999999999864322 233333221                 1245


Q ss_pred             EEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          123 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       123 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      +++||++|+++++++++++.+++|++|++|||||+..+   .+++.+.+.++|++++++|+.+++++++.++|.|++   
T Consensus        64 ~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---  140 (258)
T PRK07533         64 FLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---  140 (258)
T ss_pred             EEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---
Confidence            78999999999999999999999999999999998642   256778899999999999999999999999999963   


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  279 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  279 (388)
                      +|+||++||. ++..+.+.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... .. ..      ..
T Consensus       141 ~g~Ii~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~-~~-~~------~~  211 (258)
T PRK07533        141 GGSLLTMSYY-GAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD-FD-AL------LE  211 (258)
T ss_pred             CCEEEEEecc-ccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC-cH-HH------HH
Confidence            4899999987 5667778889999999999999999999999999999999999999998543211 00 00      01


Q ss_pred             HHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          280 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       280 e~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +...+.+++++..|++++..+.||+++...+.++..+..||++.
T Consensus       212 ~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~  255 (258)
T PRK07533        212 DAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYH  255 (258)
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCccc
Confidence            11223455677788899999999999988888888888888763

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.6e-40  Score=308.93  Aligned_cols=244  Identities=17%  Similarity=0.143  Sum_probs=199.7

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++||+++||||++  |||+++|++|+++|++|++.+|+. +.++..+++.++                .+. ..++++|+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~----------------~g~-~~~~~~Dv   67 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEE----------------IGC-NFVSELDV   67 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHh----------------cCC-ceEEEccC
Confidence            5789999999997  999999999999999999999884 444444555432                112 24578999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.+++.++++++|.|++   +|+||+
T Consensus        68 ~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~  144 (260)
T PRK06603         68 TNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVT  144 (260)
T ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEE
Confidence            99999999999999999999999999998542   246778899999999999999999999999999963   489999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.+.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... ... ..      .+.....
T Consensus       145 isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~-~~------~~~~~~~  215 (260)
T PRK06603        145 LTYY-GAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-FST-ML------KSHAATA  215 (260)
T ss_pred             EecC-ccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-cHH-HH------HHHHhcC
Confidence            9997 5667788889999999999999999999999999999999999999997532110 000 00      1111233


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +++++..|++++..+.||+++...+.++..+..||+|..
T Consensus       216 p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  254 (260)
T PRK06603        216 PLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNI  254 (260)
T ss_pred             CcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcccc
Confidence            567778899999999999999888889988888888743

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-39  Score=307.11  Aligned_cols=252  Identities=20%  Similarity=0.296  Sum_probs=206.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++++                 .+.++.++++|++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   64 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS-----------------NGGKAKAYHVDIS   64 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh-----------------cCCeEEEEEeecC
Confidence            3679999999999999999999999999999999999 777777776654                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      ++++++++++++.+.+|++|+||||||+..+..++.+.+.+.|++++++|+.+++.++++++|+|+++  +|+||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~  142 (272)
T PRK08589         65 DEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSF  142 (272)
T ss_pred             CHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCch
Confidence            99999999999999999999999999986534677888999999999999999999999999999876  3899999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.+....|++||+|+++|++++++|+.++||+||+|+||+|+|++...............+.  .......++++
T Consensus       143 -~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  219 (272)
T PRK08589        143 -SGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFR--ENQKWMTPLGR  219 (272)
T ss_pred             -hhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHh--hhhhccCCCCC
Confidence             677777888999999999999999999999999999999999999999865322111100000000  00001124556


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +..|++++..+.||+++...+.++..+..||++..
T Consensus       220 ~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~~  254 (272)
T PRK08589        220 LGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMA  254 (272)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCccc
Confidence            66788888888899988887888888888877643

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-40  Score=306.10  Aligned_cols=252  Identities=24%  Similarity=0.296  Sum_probs=210.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..               .+.++.++++|++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~   68 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV---------------AGARVLAVPADVT   68 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc---------------CCceEEEEEccCC
Confidence            4689999999999999999999999999999999999998888877775421               1356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.|+||++||.
T Consensus        69 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~  146 (260)
T PRK07063         69 DAASVAAAVAAAEEAFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAST  146 (260)
T ss_pred             CHHHHHHHHHHHHHHhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECCh
Confidence            999999999999999999999999999865 4667788999999999999999999999999999876 46899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+|+.+|+++++.|++++||+||+|+||+|+|++............ .   .........++++
T Consensus       147 -~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~-~---~~~~~~~~~~~~r  221 (260)
T PRK07063        147 -HAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPA-A---ARAETLALQPMKR  221 (260)
T ss_pred             -hhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChH-H---HHHHHHhcCCCCC
Confidence             6777888889999999999999999999999999999999999999998543211000000 0   0001112234567


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|++++..+.||+++...+.+|..+..||++.
T Consensus       222 ~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        222 IGRPEEVAMTAVFLASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             CCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence            8889999999999999988888888888888763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-39  Score=306.09  Aligned_cols=244  Identities=13%  Similarity=0.114  Sum_probs=197.5

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++||+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++.+.                . .....++||+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~----------------~-~~~~~~~~Dv   65 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAE----------------L-DSELVFRCDV   65 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhc----------------c-CCceEEECCC
Confidence            68999999997  67999999999999999999998863 333444444321                1 2245789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCC---CC-cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KP-LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|+++++++++++.+++|++|++|||||+..+.   .+ +.+.+.++|++++++|+.++++++++++|.|+++  +|+||
T Consensus        66 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv  143 (261)
T PRK08690         66 ASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIV  143 (261)
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEE
Confidence            999999999999999999999999999986421   12 3567889999999999999999999999999754  48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.|++..|++||+|+.+|+++++.|++++|||||+|+||+|+|++.......  ....      .+....
T Consensus       144 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~--~~~~------~~~~~~  214 (261)
T PRK08690        144 ALSYL-GAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF--GKLL------GHVAAH  214 (261)
T ss_pred             EEccc-ccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch--HHHH------HHHhhc
Confidence            99987 56678889999999999999999999999999999999999999999975432110  0000      011122


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+++|+..|+++++.+.||+++...+.++..+..||++.
T Consensus       215 ~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        215 NPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYS  253 (261)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCcc
Confidence            356778889999999999999988888888888888764

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-39  Score=304.87  Aligned_cols=255  Identities=20%  Similarity=0.259  Sum_probs=211.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..               .+.++.++++|+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~   68 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF---------------PGARLLAARCDV   68 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEEecC
Confidence            46789999999999999999999999999999999999998888777775532               124788999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|+++ +.|+||++||
T Consensus        69 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  146 (265)
T PRK07062         69 LDEADVAAFAAAVEARFGGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNS  146 (265)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecc
Confidence            9999999999999999999999999999865 5778889999999999999999999999999999987 4689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH---HHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV---ART  285 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v---A~~  285 (388)
                      . ++..+.++...|+++|+|+.+|+++++.|+.++||+||+|+||+|+|++............. ......+..   ...
T Consensus       147 ~-~~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  224 (265)
T PRK07062        147 L-LALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQ-SWEAWTAALARKKGI  224 (265)
T ss_pred             c-cccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCC-ChHHHHHHHhhcCCC
Confidence            8 67778888899999999999999999999999999999999999999986432110000000 000000111   123


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..|++++..+.||+++...+.+|..+..||++
T Consensus       225 p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        225 PLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             CcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            4567788899999999999988888888888888775

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-39  Score=301.72  Aligned_cols=248  Identities=24%  Similarity=0.321  Sum_probs=203.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++.+|+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   64 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRA-----------------EGGEAVALAGDV   64 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCC
Confidence            467899999999999999999999999999999999999988887777654                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|++|||||+..+..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||
T Consensus        65 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS  143 (254)
T PRK07478         65 RDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTST  143 (254)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            999999999999999999999999999986535677889999999999999999999999999999887 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      ..+...+.++...|++||+|+++++++++.|+.++||+||+|+||+++|++.......  .......      -...+++
T Consensus       144 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~------~~~~~~~  215 (254)
T PRK07478        144 FVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--PEALAFV------AGLHALK  215 (254)
T ss_pred             hHhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--HHHHHHH------HhcCCCC
Confidence            7322356788899999999999999999999999999999999999999976432111  0000000      0011234


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..|++++..+.||+++...+.+|..+..||++
T Consensus       216 ~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        216 RMAQPEEIAQAALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCch
Confidence            5567777777778888887767777777666665

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-39  Score=310.28  Aligned_cols=269  Identities=17%  Similarity=0.229  Sum_probs=203.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----------HHHHHHHHHHHHHHhhhhhhcCCCCcccccCc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS----------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHA  119 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~----------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  119 (388)
                      +++||+++||||++|||+++|++|+++|++|++++|+.          ++++++.+++.+                 .+.
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~   67 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-----------------AGG   67 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-----------------cCC
Confidence            47899999999999999999999999999999999984          344444444432                 234


Q ss_pred             eEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcc-ccCC---CCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 016493          120 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA-GTNK---GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  195 (388)
Q Consensus       120 ~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA-G~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  195 (388)
                      ++.++++|++|+++++++++++.+++|++|+||||| |...   ...++.+.+.++|++++++|+.+++.++++++|.|+
T Consensus        68 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~  147 (305)
T PRK08303         68 RGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLI  147 (305)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhh
Confidence            677899999999999999999999999999999999 8531   125677888999999999999999999999999998


Q ss_pred             cCCCCcEEEEecCCCCCCC--CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhh
Q 016493          196 DQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN  273 (388)
Q Consensus       196 ~~~~~g~Iv~isS~~~~~~--~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  273 (388)
                      ++ ++|+||++||..+...  +.+....|++||+|+.+|+++|+.|++++|||||+|+||+|+|++............  
T Consensus       148 ~~-~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~--  224 (305)
T PRK08303        148 RR-PGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENW--  224 (305)
T ss_pred             hC-CCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccch--
Confidence            76 4689999998633222  234567899999999999999999999999999999999999998532110000000  


Q ss_pred             hhccCHHHHHHHH-hhhhhhccccccceeeccCHHH-HHHHHHhHhhcCccccccccchhccchhhhhccccc
Q 016493          274 IICELPETVARTL-VPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAEN  344 (388)
Q Consensus       274 ~~~~~pe~vA~~~-l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~w~e~  344 (388)
                           .+.....+ +.+...|++++..+.||+++.. .+.+| .++.++.+..+.+...++..+.++|+-.++
T Consensus       225 -----~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (305)
T PRK08303        225 -----RDALAKEPHFAISETPRYVGRAVAALAADPDVARWNG-QSLSSGQLARVYGFTDLDGSRPDAWRYLVE  291 (305)
T ss_pred             -----hhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCC-cEEEhHHHHHhcCccCCCCCCCcchhhhhh
Confidence                 01111222 3455678888888889988764 35554 345555565656555555555566654433

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-39  Score=303.09  Aligned_cols=246  Identities=17%  Similarity=0.158  Sum_probs=197.7

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.... +..+++.++.               .+.++.++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~~~~~---------------~~~~~~~~~~   66 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVRELADTL---------------EGQESLLLPC   66 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHHHHHHHc---------------CCCceEEEec
Confidence            46789999999997  8999999999999999999998763221 1222232211               1246788999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      |++|+++++++++++.+++|++|++|||||+...   ..++.+.+.++|++++++|+.+++.++++++|.|++   +|+|
T Consensus        67 Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~I  143 (257)
T PRK08594         67 DVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSI  143 (257)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceE
Confidence            9999999999999999999999999999998541   256778899999999999999999999999999964   4899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.+.+..|++||+|+++|+++|+.|++++|||||+|+||+|+|++...... .....       .+...
T Consensus       144 v~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~-------~~~~~  214 (257)
T PRK08594        144 VTLTYL-GGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSIL-------KEIEE  214 (257)
T ss_pred             EEEccc-CCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHH-------HHHhh
Confidence            999998 6777888889999999999999999999999999999999999999997432110 00000       01112


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +.++.+...|++++..+.||+++...+.++..+..||++
T Consensus       215 ~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        215 RAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             cCCccccCCHHHHHHHHHHHcCcccccccceEEEECCch
Confidence            234566778888999999999998888888888777765

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.4e-39  Score=302.70  Aligned_cols=241  Identities=14%  Similarity=0.165  Sum_probs=195.5

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++...                 ......++||+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~-----------------~~~~~~~~~Dl   65 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ-----------------LGSDIVLPCDV   65 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhc-----------------cCCceEeecCC
Confidence            5789999999986  99999999999999999999998 3454555555432                 12356789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC-----cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP-----LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      +|+++++++++++.+++|++|++|||||+.. ..+     +.+.+.++|++++++|+.+++.+++.+.|.|+ +  +|+|
T Consensus        66 ~~~~~v~~~~~~~~~~~g~iD~linnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~g~I  141 (262)
T PRK07984         66 AEDASIDAMFAELGKVWPKFDGFVHSIGFAP-GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P--GSAL  141 (262)
T ss_pred             CCHHHHHHHHHHHHhhcCCCCEEEECCccCC-ccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C--CcEE
Confidence            9999999999999999999999999999854 222     56678999999999999999999999998664 2  4899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.+.+..|++||+|+.+|+++++.|++++|||||+|+||+|+|++...... . ...      ......
T Consensus       142 v~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~-~~~------~~~~~~  212 (262)
T PRK07984        142 LTLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-F-RKM------LAHCEA  212 (262)
T ss_pred             EEEecC-CCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-h-HHH------HHHHHH
Confidence            999987 5667788899999999999999999999999999999999999999986432111 0 000      011122


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+++++..|++++..+.||+++...+.++..+..||++
T Consensus       213 ~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        213 VTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             cCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            345677888999999999999998878888877777775

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.2e-39  Score=307.65  Aligned_cols=258  Identities=17%  Similarity=0.146  Sum_probs=200.8

Q ss_pred             ccCCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           48 HCKAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        48 ~~~~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      .++++||++|||||  |+|||+++|+.|+++|++|++ +|+.+++++...++++...+.......    .........+.
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   78 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPD----GSLMEITKVYP   78 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhccc----ccccCcCeeee
Confidence            35789999999999  899999999999999999999 899999988887775421000000000    00011245688


Q ss_pred             ccC--CC------------------HHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHH
Q 016493          126 CDV--CE------------------PADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSI  184 (388)
Q Consensus       126 ~Dl--s~------------------~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~  184 (388)
                      +|+  ++                  +++++++++++.+++|++|+||||||.... ..++.+.+.++|++++++|+.+++
T Consensus        79 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~  158 (303)
T PLN02730         79 LDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFV  158 (303)
T ss_pred             cceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            888  33                  448999999999999999999999986431 368889999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCccccccccc
Q 016493          185 LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       185 ~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~  262 (388)
                      .++|+++|.|+++   |+||++||. ++..+.|++ ..|++||+|+.+|+++|+.|+++ +|||||+|+||+|+|++...
T Consensus       159 ~l~~~~~p~m~~~---G~II~isS~-a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        159 SLLQHFGPIMNPG---GASISLTYI-ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA  234 (303)
T ss_pred             HHHHHHHHHHhcC---CEEEEEech-hhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence            9999999999753   899999997 566667755 58999999999999999999986 79999999999999998643


Q ss_pred             CccchhhhhhhhhccCHHH-HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          263 GSTIQNKQMFNIICELPET-VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       263 ~~~~~~~~~~~~~~~~pe~-vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ... .. ..       .+. ....++.++..|++++..+.||+++...+.++..+..||++.
T Consensus       235 ~~~-~~-~~-------~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~  287 (303)
T PLN02730        235 IGF-ID-DM-------IEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLN  287 (303)
T ss_pred             ccc-cH-HH-------HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCcc
Confidence            110 00 00       011 112245667788889999999999988888888888888764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-38  Score=297.01  Aligned_cols=247  Identities=22%  Similarity=0.296  Sum_probs=206.2

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +.+++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++..                 .+.++..++
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~   64 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-----------------AGRRAIQIA   64 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-----------------cCCceEEEE
Confidence            346789999999999999999999999999999999999764 45555555543                 235678899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.++||+
T Consensus        65 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~  142 (254)
T PRK06114         65 ADVTSKADLRAAVARTEAELGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVN  142 (254)
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEE
Confidence            9999999999999999999999999999999876 5778889999999999999999999999999999877 4789999


Q ss_pred             ecCCCCCCCCCC--CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          206 MDGAGSGGSSTP--LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       206 isS~~~~~~~~~--~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      +||. ++..+.+  ....|+++|+|+++++++++.|+.++||+||+|+||+++|++......  ...       ..+...
T Consensus       143 isS~-~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~--~~~-------~~~~~~  212 (254)
T PRK06114        143 IASM-SGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEM--VHQ-------TKLFEE  212 (254)
T ss_pred             ECch-hhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccc--hHH-------HHHHHh
Confidence            9987 4544443  368999999999999999999999999999999999999998642110  000       011223


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+++++..|+|++..+.||+++...+.+|+.+..||++
T Consensus       213 ~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        213 QTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence            345678888999999999999998888888888888776

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=298.68  Aligned_cols=248  Identities=19%  Similarity=0.268  Sum_probs=202.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++|+++||||++|||+++|++|+++|++|++++| +++++++..++++..                .+.++.++++|
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   67 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK----------------YGIKAKAYPLN   67 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh----------------cCCceEEEEcC
Confidence            3578999999999999999999999999999998865 566666666665432                23578899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCC-----CCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-----GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      ++|+++++++++++.+.++++|++|||||+..     ...++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.|+
T Consensus        68 ~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~  146 (260)
T PRK08416         68 ILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGS  146 (260)
T ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEE
Confidence            99999999999999999999999999999753     13567788899999999999999999999999999876 4689


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ||++||. ++..+.+++..|++||+|+++|+++|+.|++++||+||+|+||+++|++.......  ...      ..+..
T Consensus       147 iv~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~--~~~------~~~~~  217 (260)
T PRK08416        147 IISLSST-GNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY--EEV------KAKTE  217 (260)
T ss_pred             EEEEecc-ccccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC--HHH------HHHHH
Confidence            9999997 56777888999999999999999999999999999999999999999985432110  000      00111


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...+++++..|++++..+.||+++...+.++..+..||++
T Consensus       218 ~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        218 ELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            2234566778888888888999888777777777777665

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-38  Score=301.52  Aligned_cols=243  Identities=14%  Similarity=0.185  Sum_probs=197.3

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++|+++||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.++.                 .....+++|+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-----------------~~~~~~~~Dl   69 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-----------------GAFVAGHCDV   69 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-----------------CCceEEecCC
Confidence            468999999997  89999999999999999999988732 233333333321                 1245689999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.+++.++++++|.|++   +|+||+
T Consensus        70 ~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~  146 (272)
T PRK08159         70 TDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILT  146 (272)
T ss_pred             CCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEE
Confidence            99999999999999999999999999998642   256778899999999999999999999999999963   489999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.|++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++...... . ....      ...-...
T Consensus       147 iss~-~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~-~~~~------~~~~~~~  217 (272)
T PRK08159        147 LTYY-GAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD-F-RYIL------KWNEYNA  217 (272)
T ss_pred             Eecc-ccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc-c-hHHH------HHHHhCC
Confidence            9987 5677888899999999999999999999999999999999999999987432111 0 0000      0001123


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +++++..|+|+++.+.||+++...+.++..+..||++.
T Consensus       218 p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        218 PLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             cccccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence            56677889999999999999988888998888888874

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=302.51  Aligned_cols=243  Identities=21%  Similarity=0.275  Sum_probs=198.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---------HHHHHHHHHHHHHHhhhhhhcCCCCcccccCce
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS---------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK  120 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~---------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  120 (388)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.         ++++++.+++.+                 .+.+
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~~   65 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-----------------AGGE   65 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh-----------------cCCc
Confidence            36799999999999999999999999999999998876         666666666543                 2356


Q ss_pred             EEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-
Q 016493          121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-  199 (388)
Q Consensus       121 i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-  199 (388)
                      +.++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|+++.. 
T Consensus        66 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  144 (286)
T PRK07791         66 AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKA  144 (286)
T ss_pred             eEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc
Confidence            788999999999999999999999999999999999876 467889999999999999999999999999999976421 


Q ss_pred             ----CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhh
Q 016493          200 ----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  275 (388)
Q Consensus       200 ----~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  275 (388)
                          .|+||++||. ++..+.++...|++||+|+.+|+++|+.|++++||+||+|+|| ++|++......    ....  
T Consensus       145 ~~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~----~~~~--  216 (286)
T PRK07791        145 GRAVDARIINTSSG-AGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA----EMMA--  216 (286)
T ss_pred             CCCCCcEEEEeCch-hhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH----HHHh--
Confidence                3799999997 6777888999999999999999999999999999999999999 89987532110    0000  


Q ss_pred             ccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          276 CELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       276 ~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                       ..+..     ..+...|++++..+.||+++...+.+|..+..||++..
T Consensus       217 -~~~~~-----~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        217 -KPEEG-----EFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             -cCccc-----ccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence             00000     00123566777777888888877778888888887654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-38  Score=298.52  Aligned_cols=242  Identities=12%  Similarity=0.109  Sum_probs=192.1

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++|+++||||  ++|||+++|++|+++|++|++++|... .++..+++.++                .+ ....+++|+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~----------------~~-~~~~~~~Dv   65 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAE----------------FG-SDLVFPCDV   65 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHh----------------cC-CcceeeccC
Confidence            57899999996  689999999999999999999876522 22222333221                11 124689999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCC---CC-cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KP-LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|+++++++++++.+++|++|++|||||+..+.   .+ +.+.+.++|++.+++|+.+++.++++++|+|++   .|+||
T Consensus        66 ~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii  142 (260)
T PRK06997         66 ASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLL  142 (260)
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEE
Confidence            999999999999999999999999999986421   12 456788999999999999999999999999942   48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.+.+..|++||+|+.+|+++|+.|++++|||||+|+||+|+|++...... . ...      ..+..++
T Consensus       143 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~-~~~------~~~~~~~  213 (260)
T PRK06997        143 TLSYL-GAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-F-GKI------LDFVESN  213 (260)
T ss_pred             EEecc-ccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-h-hhH------HHHHHhc
Confidence            99987 5677888889999999999999999999999999999999999999986432110 0 000      0011122


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .++++...|+++++.+.||+++...+.++..+..||++
T Consensus       214 ~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        214 APLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             CcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCCh
Confidence            35677788999999999999998888888888887775

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.3e-38  Score=294.91  Aligned_cols=245  Identities=19%  Similarity=0.271  Sum_probs=203.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||+++|++|+++|++|++.+|+..  ++..+++.+                 .+.++..+++|+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~~Dl   66 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTA-----------------LGRRFLSLTADL   66 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHh-----------------cCCeEEEEECCC
Confidence            4678999999999999999999999999999998887642  333344432                 234688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.++++++|++|||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|++++.+|+||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS  145 (253)
T PRK08993         67 RKIDGIPALLERAVAEFGHIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS  145 (253)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECc
Confidence            9999999999999999999999999999865 567888999999999999999999999999999988755689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.+....|++||+|+++++++++.|+.++||+||+|+||+++|++.......  ...      ..+.....+.+
T Consensus       146 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~--~~~------~~~~~~~~p~~  216 (253)
T PRK08993        146 M-LSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD--EQR------SAEILDRIPAG  216 (253)
T ss_pred             h-hhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc--hHH------HHHHHhcCCCC
Confidence            7 56777788899999999999999999999999999999999999999986432110  000      01112233456


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..|++++..+.||+++...+.+|..+..||++
T Consensus       217 r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        217 RWGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence            7778889999999999998888888877777765

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-38  Score=295.99  Aligned_cols=250  Identities=23%  Similarity=0.228  Sum_probs=205.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||++|||+++|++|+++|++|++++|+++++++..+++.+                 . .++.++++|++|++++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~-~~~~~~~~Dv~d~~~~   63 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE-----------------Y-GEVYAVKADLSDKDDL   63 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------c-CCceEEEcCCCCHHHH
Confidence            699999999999999999999999999999999988887777643                 1 3577899999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +++++++.++++++|+||||||.... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.++.+.|+||++||. ++.
T Consensus        64 ~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~-~~~  142 (259)
T PRK08340         64 KNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSV-SVK  142 (259)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCc-ccC
Confidence            99999999999999999999997531 2456788889999999999999999999999998754457899999988 677


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc--CHHHHHHHHhhhhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE--LPETVARTLVPRIR  291 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~pe~vA~~~l~~~~  291 (388)
                      .+.++...|++||+|+.+|+++|+.|++++||+||+|+||+++|++..................  ..+...+.+++|+.
T Consensus       143 ~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (259)
T PRK08340        143 EPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTG  222 (259)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCC
Confidence            7888889999999999999999999999999999999999999998642111000000000000  01112334567888


Q ss_pred             hccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          292 VVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       292 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .|+|++..+.||+++...+.+|..+..||++.
T Consensus       223 ~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        223 RWEELGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             CHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence            99999999999999998899999888888763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-38  Score=293.07  Aligned_cols=247  Identities=20%  Similarity=0.287  Sum_probs=208.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+++++++..++++.                 .+.++..+.+|
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   66 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ-----------------EGIKAHAAPFN   66 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEecC
Confidence            3567899999999999999999999999999999999999888887777654                 23467889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|+++ +.++||++|
T Consensus        67 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~is  144 (254)
T PRK08085         67 VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-QAGKIINIC  144 (254)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEc
Confidence            99999999999999999999999999999865 5778889999999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.++...|+++|+++++++++++.|++++||+||+|+||+++|++.......  ....      +......++
T Consensus       145 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~------~~~~~~~p~  215 (254)
T PRK08085        145 SM-QSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFT------AWLCKRTPA  215 (254)
T ss_pred             cc-hhccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHH------HHHHhcCCC
Confidence            87 56677788899999999999999999999999999999999999999986432211  0000      111123345


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .++..|+++++.+.||+++...+.++..+..||++
T Consensus       216 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        216 ARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            67778888888889999988878888777777765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.6e-38  Score=294.69  Aligned_cols=241  Identities=13%  Similarity=0.106  Sum_probs=191.6

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           50 KAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        50 ~~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++                    +.++.+++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~--------------------~~~~~~~~   63 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL--------------------PEPAPVLE   63 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc--------------------CCCCcEEe
Confidence            367899999999  89999999999999999999999864  2233332221                    12467899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCC---CCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      +|++|+++++++++++.+++|++|++|||||+....   .++.+.+.++|++++++|+.+++.+++.++|.|++   +|+
T Consensus        64 ~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~  140 (256)
T PRK07889         64 LDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGS  140 (256)
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---Cce
Confidence            999999999999999999999999999999986421   35678889999999999999999999999999973   479


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ||++++.  +..+.+.+..|++||+|+.+|+++|+.|++++|||||+|+||+|+|++....... . ...      ....
T Consensus       141 Iv~is~~--~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-~-~~~------~~~~  210 (256)
T PRK07889        141 IVGLDFD--ATVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-E-LLE------EGWD  210 (256)
T ss_pred             EEEEeec--ccccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-H-HHH------HHHH
Confidence            9999864  3455677888999999999999999999999999999999999999975432110 0 000      0011


Q ss_pred             HHHHhh-hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          283 ARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       283 A~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+.+++ ++..|++++..+.||+++...+.++..+..||++.
T Consensus       211 ~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        211 ERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             hcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCcee
Confidence            122344 46778888888889999887777887777777653

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-37  Score=295.76  Aligned_cols=226  Identities=27%  Similarity=0.381  Sum_probs=195.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++|||||+|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++.+|+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~-----------------~g~~~~~~~~Dv   65 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA-----------------LGAEVLVVPTDV   65 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeC
Confidence            357899999999999999999999999999999999999999888877765                 345688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+.+|++|++|||||+.. .+++.+.+.+++++++++|+.+++++++.++|+|+++ +.|+||++||
T Consensus        66 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS  143 (330)
T PRK06139         66 TDADQVKALATQAASFGGRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMIS  143 (330)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence            9999999999999999999999999999876 6788999999999999999999999999999999987 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CeEEEEEecCcccccccccCccchhhhh-hhhhccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS-KVGVHTASPGMVLTDLLLSGSTIQNKQM-FNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~-gI~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~pe~vA~~~  286 (388)
                      . .+..+.|....|++||+|+.+|+++|+.|+.+. ||+|++|+||+++||+..+......... ......+||++|+.+
T Consensus       144 ~-~~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i  222 (330)
T PRK06139        144 L-GGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAV  222 (330)
T ss_pred             h-hhcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHH
Confidence            7 677888899999999999999999999999875 9999999999999998754221111111 112235899999999


Q ss_pred             hhhhhhcc
Q 016493          287 VPRIRVVK  294 (388)
Q Consensus       287 l~~~~~~~  294 (388)
                      +..+..+.
T Consensus       223 l~~~~~~~  230 (330)
T PRK06139        223 VRLADRPR  230 (330)
T ss_pred             HHHHhCCC
Confidence            98776554

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-38  Score=293.28  Aligned_cols=251  Identities=23%  Similarity=0.226  Sum_probs=202.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +.+++|+++||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++++|+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~   61 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF--------------------GDHVLVVEGDV   61 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCcceEEEccC
Confidence            3468999999999999999999999999999999999988776554432                    23578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHH----HHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE----IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~----~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|+++++++++++.+.++++|++|||||+.....++.+.+.++    |++++++|+.+++.+++.++|.|+++  +|+||
T Consensus        62 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv  139 (263)
T PRK06200         62 TSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMI  139 (263)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEE
Confidence            9999999999999999999999999999854335566666665    89999999999999999999999865  48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch-hhhhhhhhccCHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-NKQMFNIICELPETVA  283 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~pe~vA  283 (388)
                      +++|. ++..+.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++........ ................
T Consensus       140 ~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T PRK06200        140 FTLSN-SSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA  217 (263)
T ss_pred             EECCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc
Confidence            99987 677777888899999999999999999999885 99999999999999864321100 0000000000011112


Q ss_pred             HHHhhhhhhccccccceeeccCHH-HHHHHHHhHhhcCccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWF  323 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~  323 (388)
                      ..+++++..|+|++..+.||+++. ..+.+|..+..||++.
T Consensus       218 ~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~  258 (263)
T PRK06200        218 ITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGLG  258 (263)
T ss_pred             CCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCcee
Confidence            345678889999999999999988 8889999998888864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-37  Score=294.18  Aligned_cols=256  Identities=21%  Similarity=0.289  Sum_probs=211.5

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ...+++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.+++
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~   65 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA-----------------AGGEALAVK   65 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEE
Confidence            345578899999999999999999999999999999999998888777766644                 235688999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCC--------------CCcCCCCHHHHHHHHHhhchHHHHHHHHHH
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--------------KPLLQFTNEEIEQIVSTNLVGSILCTREAM  191 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~--------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l  191 (388)
                      +|++|+++++++++++.++++++|++|||||...+.              .++.+.+.++|++.+++|+.+++.++++++
T Consensus        66 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  145 (278)
T PRK08277         66 ADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFA  145 (278)
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            999999999999999999999999999999974321              346778899999999999999999999999


Q ss_pred             HHHHcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhh
Q 016493          192 RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM  271 (388)
Q Consensus       192 p~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  271 (388)
                      |.|+++ +.|+||++||. ++..+.++...|++||+|+++|+++++.|+.++||+||+|+||+|+|++............
T Consensus       146 ~~~~~~-~~g~ii~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~  223 (278)
T PRK08277        146 KDMVGR-KGGNIINISSM-NAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSL  223 (278)
T ss_pred             HHHHhc-CCcEEEEEccc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccc
Confidence            999877 46899999988 6778888899999999999999999999999999999999999999997543211000000


Q ss_pred             hhhhccCHHHHHHHHhhhhhhccccccceeeccCH-HHHHHHHHhHhhcCccc
Q 016493          272 FNIICELPETVARTLVPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWF  323 (388)
Q Consensus       272 ~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~~  323 (388)
                      ..   ...+.....+++++..|++++.++.||+++ ...+.++..+..||++.
T Consensus       224 ~~---~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        224 TE---RANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             hh---HHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCee
Confidence            00   001112334567888899999999999999 78788888888888764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.9e-37  Score=291.15  Aligned_cols=249  Identities=20%  Similarity=0.225  Sum_probs=197.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+.                    .+.++..+++|+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~--------------------~~~~~~~~~~D~   60 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA--------------------HGDAVVGVEGDV   60 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--------------------cCCceEEEEecc
Confidence            356899999999999999999999999999999999998776554321                    124688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCH----HHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN----EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~----~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|.++++++++++.++++++|++|||||......++.+.+.    ++|++++++|+.+++.++++++|.|+++  +|+||
T Consensus        61 ~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv  138 (262)
T TIGR03325        61 RSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVI  138 (262)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEE
Confidence            99999999999999999999999999997532234444443    5799999999999999999999999865  37899


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH--
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV--  282 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v--  282 (388)
                      +++|. .+..+.++...|++||+|+++|+++++.|++++ |+||+|+||+++|++..............  ....++.  
T Consensus       139 ~~sS~-~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~--~~~~~~~~~  214 (262)
T TIGR03325       139 FTISN-AGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSIS--TVPLGDMLK  214 (262)
T ss_pred             EEecc-ceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcccccccccccccc--ccchhhhhh
Confidence            99887 567777888899999999999999999999987 99999999999999864321100000000  0011121  


Q ss_pred             HHHHhhhhhhccccccceeeccCHH-HHHHHHHhHhhcCccc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWF  323 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~  323 (388)
                      ...+++|...|++++..+.||+++. ..+.++..+..||++.
T Consensus       215 ~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       215 SVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             hcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCee
Confidence            1245778889999999999999874 5678888888888764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=289.45  Aligned_cols=246  Identities=22%  Similarity=0.316  Sum_probs=204.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+ ++.+++.+.+.+                 .+.++.++++|
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~~~D   71 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-----------------EGRKVTFVQVD   71 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-----------------cCCceEEEEcC
Confidence            456789999999999999999999999999999999998 555555554433                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++.++++++++++.+.+|++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ +.|+||++|
T Consensus        72 ~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~is  149 (258)
T PRK06935         72 LTKPESAEKVVKEALEEFGKIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIA  149 (258)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEEC
Confidence            99999999999999999999999999999866 5778888999999999999999999999999999887 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.+..+.|+++|+|++++++++++|+.++||+||+|+||+++|++..........        ..+.....+.
T Consensus       150 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~--------~~~~~~~~~~  220 (258)
T PRK06935        150 SM-LSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNR--------NDEILKRIPA  220 (258)
T ss_pred             CH-HhccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHH--------HHHHHhcCCC
Confidence            87 56777788899999999999999999999999999999999999999975432110000        0111122344


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++...|++++..+.||+++...+.++..+..||++
T Consensus       221 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        221 GRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            56777888888889999988877777777777664

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-37  Score=287.57  Aligned_cols=247  Identities=22%  Similarity=0.332  Sum_probs=204.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++++++.+++.+                 .+.++..+++|+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   66 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA-----------------AGGKAEALACHI   66 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCC
Confidence            568899999999999999999999999999999999999888877777654                 234678899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++.++++++++++.+.++++|++|||||......++.+.+.+++++.+++|+.+++.++++++|+|+++ +.++|+++||
T Consensus        67 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  145 (252)
T PRK07035         67 GEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSIVNVAS  145 (252)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEEEEECc
Confidence            999999999999999999999999999975434677788999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.++...|++||+++++|++++++|+.++||+||+|+||+|+|++........  ...      ++.....+..
T Consensus       146 ~-~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~--~~~------~~~~~~~~~~  216 (252)
T PRK07035        146 V-NGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKND--AIL------KQALAHIPLR  216 (252)
T ss_pred             h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCH--HHH------HHHHccCCCC
Confidence            7 567788889999999999999999999999999999999999999999864422110  000      1111222345


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +...|++++..+.|++++...+.++..+..||++
T Consensus       217 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        217 RHAEPSEMAGAVLYLASDASSYTTGECLNVDGGY  250 (252)
T ss_pred             CcCCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            5667777787788888887766666666666554

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-37  Score=289.74  Aligned_cols=241  Identities=20%  Similarity=0.280  Sum_probs=202.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~   62 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--------------------GERARFIATDIT   62 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCeeEEEEecCC
Confidence            468999999999999999999999999999999999988776654432                    246888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|++|||||... ... .+.+.++|++.+++|+.+++.++++++|.|+ + +.|+||++||.
T Consensus        63 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~g~ii~isS~  138 (261)
T PRK08265         63 DDAAIERAVATVVARFGRVDILVNLACTYL-DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-GGGAIVNFTSI  138 (261)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-CCcEEEEECch
Confidence            999999999999999999999999999864 233 3678899999999999999999999999998 4 46899999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH--HHHh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA--RTLV  287 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA--~~~l  287 (388)
                       ++..+.++...|+++|+++.+++++++.|+.++||+||+|+||+++|++...........        .+...  ..++
T Consensus       139 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~--------~~~~~~~~~p~  209 (261)
T PRK08265        139 -SAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAK--------ADRVAAPFHLL  209 (261)
T ss_pred             -hhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhH--------HHHhhcccCCC
Confidence             677788889999999999999999999999999999999999999999864321110000        01111  1245


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +++..|++++..+.||+++...+.++..+..||++.
T Consensus       210 ~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~~  245 (261)
T PRK08265        210 GRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGYS  245 (261)
T ss_pred             CCccCHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence            677788899999999999888888898888888874

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-37  Score=286.26  Aligned_cols=240  Identities=23%  Similarity=0.269  Sum_probs=195.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++|+++||||++|||+++|++|+++|++|++.+ |+.+++++...++.+                 .+.++..+++|++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-----------------NGGSAFSIGANLE   64 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEecccC
Confidence            4689999999999999999999999999999875 666777766666543                 2345778999999


Q ss_pred             CHHHHHHHHHHHHhh----cC--CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          130 EPADVQKLSNFAVNE----FG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~----~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      +.++++.+++++.+.    ++  ++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|.|++   .|+|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~i  140 (252)
T PRK12747         65 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRI  140 (252)
T ss_pred             CHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeE
Confidence            999999999887653    34  8999999999865 567888999999999999999999999999999975   3799


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.++...|++||+|+++++++++.|+.++||+||+|+||+|+|++.......  ..        .+...
T Consensus       141 v~isS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~--------~~~~~  209 (252)
T PRK12747        141 INISSA-ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD--PM--------MKQYA  209 (252)
T ss_pred             EEECCc-ccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC--HH--------HHHHH
Confidence            999998 67778888899999999999999999999999999999999999999986432110  00        01111


Q ss_pred             H--HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 R--TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~--~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .  .+++++..|++++..+.||+++...+.++..+..||++
T Consensus       210 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        210 TTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            1  13456678888888888998887767777766666654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=4.7e-38  Score=291.75  Aligned_cols=233  Identities=27%  Similarity=0.413  Sum_probs=203.2

Q ss_pred             cCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHHHH
Q 016493           60 GST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKL  137 (388)
Q Consensus        60 Gas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~  137 (388)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.++.+                .+  ++++|++++++++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~----------------~~--~~~~D~~~~~~v~~~   62 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG----------------AE--VIQCDLSDEESVEAL   62 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT----------------SE--EEESCTTSHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC----------------Cc--eEeecCcchHHHHHH
Confidence            666  9999999999999999999999999998777777776532                33  499999999999999


Q ss_pred             HHHHHhhc-CCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          138 SNFAVNEF-GSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       138 ~~~i~~~~-g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++.+.+ |++|+||||+|...+   ..++.+.+.++|++.+++|+.+++.++|+++|+|+++   |+||++||. ++.
T Consensus        63 ~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gsii~iss~-~~~  138 (241)
T PF13561_consen   63 FDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG---GSIINISSI-AAQ  138 (241)
T ss_dssp             HHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE---EEEEEEEEG-GGT
T ss_pred             HHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCcccccch-hhc
Confidence            99999999 999999999998763   3678889999999999999999999999999988864   899999988 677


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      .+.+++..|+++|+|+++|+++|+.||++ +|||||+|+||+++|++......  .+.      .......+.+++++..
T Consensus       139 ~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~--~~~------~~~~~~~~~pl~r~~~  210 (241)
T PF13561_consen  139 RPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG--NEE------FLEELKKRIPLGRLGT  210 (241)
T ss_dssp             SBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT--HHH------HHHHHHHHSTTSSHBE
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcccc--ccc------hhhhhhhhhccCCCcC
Confidence            78889999999999999999999999999 99999999999999997532211  000      1123345678889899


Q ss_pred             ccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          293 VKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      |+|++..+.||+++...+++|+.+..||++
T Consensus       211 ~~evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  211 PEEVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence            999999999999999999999999999987

...

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=5e-37  Score=293.51  Aligned_cols=244  Identities=20%  Similarity=0.271  Sum_probs=200.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ++++|+++||||++|||+++|++|+++|++|++.+|+.  +.++++.+.+.+                 .+.++.++.+|
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D  108 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-----------------CGRKAVLLPGD  108 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-----------------cCCeEEEEEcc
Confidence            47889999999999999999999999999999988753  334444333322                 23568889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.++++|++|||||...+..++.+.+.++|++++++|+.+++.++++++|.|++   .++||++|
T Consensus       109 l~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iS  185 (294)
T PRK07985        109 LSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTS  185 (294)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEEC
Confidence            999999999999999999999999999997543467888999999999999999999999999999964   37999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++++++++.|++++||+||+|+||+|+|++......  ....      .++.....++
T Consensus       186 S~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~--~~~~------~~~~~~~~~~  256 (294)
T PRK07985        186 SI-QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ--TQDK------IPQFGQQTPM  256 (294)
T ss_pred             Cc-hhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC--CHHH------HHHHhccCCC
Confidence            98 6777888889999999999999999999999999999999999999998532110  0000      0111223345


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++...|++++..+.||+++...+.++..+..||++
T Consensus       257 ~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        257 KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             CCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            67778889999999999998888888887777765

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-36  Score=283.46  Aligned_cols=224  Identities=25%  Similarity=0.368  Sum_probs=192.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++||+++||||++|||+++|++|+++|++|++++|+.+++++..++++.                 .+.++.++.+|++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~-----------------~~~~~~~~~~Dv~   65 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRA-----------------EGFDVHGVMCDVR   65 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEeCCCC
Confidence            46899999999999999999999999999999999999888877777653                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++++.+.+|++|++|||||+.. .+++.+.+.++|++++++|+.+++++++.++|.|.+++.+|+||++||.
T Consensus        66 d~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~  144 (275)
T PRK05876         66 HREEVTHLADEAFRLLGHVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASF  144 (275)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCh
Confidence            999999999999999999999999999976 5788899999999999999999999999999999877557899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchh------------hhh-hhhhc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN------------KQM-FNIIC  276 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~------------~~~-~~~~~  276 (388)
                       ++..+.++...|++||+++.+|+++|+.|++++||+|++|+||+++|++.........            ... .....
T Consensus       145 -~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (275)
T PRK05876        145 -AGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDN  223 (275)
T ss_pred             -hhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccC
Confidence             6778888999999999999999999999999999999999999999998643211000            000 01113


Q ss_pred             cCHHHHHHHHhhhhhh
Q 016493          277 ELPETVARTLVPRIRV  292 (388)
Q Consensus       277 ~~pe~vA~~~l~~~~~  292 (388)
                      .+|+++|+.++..+..
T Consensus       224 ~~~~dva~~~~~ai~~  239 (275)
T PRK05876        224 LGVDDIAQLTADAILA  239 (275)
T ss_pred             CCHHHHHHHHHHHHHc
Confidence            5799999999988754

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=5.1e-37  Score=286.89  Aligned_cols=251  Identities=20%  Similarity=0.330  Sum_probs=206.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+                 .+.++.++++|++|++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~~   64 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK-----------------DGGKAIAVKADVSDRD   64 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCCCHH
Confidence            68999999999999999999999999999999999888877776644                 2356788999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.+++.|++.+..++||++||. .+
T Consensus        65 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~  142 (256)
T PRK08643         65 QVFAAVRQVVDTFGDLNVVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQ-AG  142 (256)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcc-cc
Confidence            999999999999999999999999865 5778888999999999999999999999999999876556899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhc-cCHHHHHHHHhhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC-ELPETVARTLVPRIR  291 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~pe~vA~~~l~~~~  291 (388)
                      ..+.++...|+++|++++.+++.++.|+.++||+||+|+||+++|++................. .......+.+.+++.
T Consensus       143 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK08643        143 VVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLS  222 (256)
T ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCc
Confidence            7778888999999999999999999999999999999999999999865321110000000000 001112223455667


Q ss_pred             hccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          292 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       292 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++++..+.||+++...+.+|..+..||++
T Consensus       223 ~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        223 EPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            7888888889999998878888888777765

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=6.9e-36  Score=288.74  Aligned_cols=217  Identities=20%  Similarity=0.312  Sum_probs=178.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++..||+++|||||+|||+++|++|+++|++|++++|++++++++.+++++.++               +.++..+.+|+
T Consensus        49 ~~~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~---------------~~~~~~~~~Dl  113 (320)
T PLN02780         49 LKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS---------------KTQIKTVVVDF  113 (320)
T ss_pred             ccccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC---------------CcEEEEEEEEC
Confidence            344699999999999999999999999999999999999999988888765321               24688899999


Q ss_pred             CCHHHHHHHHHHHHhhcC--CccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          129 CEPADVQKLSNFAVNEFG--SIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      ++  ++.+.++++.+.++  ++|++|||||+..+ ..++.+.+.+++++++++|+.|++.+++.++|.|+++ +.|+||+
T Consensus       114 ~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~  190 (320)
T PLN02780        114 SG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIIN  190 (320)
T ss_pred             CC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            85  23333334444444  46699999998642 2467888999999999999999999999999999887 5799999


Q ss_pred             ecCCCCCCC-C-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          206 MDGAGSGGS-S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       206 isS~~~~~~-~-~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      +||. ++.. + .|....|++||+++++|+++|+.|++++||+|++|+||+|+|++.....       ......+||++|
T Consensus       191 iSS~-a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~-------~~~~~~~p~~~A  262 (320)
T PLN02780        191 IGSG-AAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR-------SSFLVPSSDGYA  262 (320)
T ss_pred             Eech-hhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC-------CCCCCCCHHHHH
Confidence            9997 4432 3 5788999999999999999999999999999999999999999865211       112235899999


Q ss_pred             HHHhhhhh
Q 016493          284 RTLVPRIR  291 (388)
Q Consensus       284 ~~~l~~~~  291 (388)
                      +.+++.++
T Consensus       263 ~~~~~~~~  270 (320)
T PLN02780        263 RAALRWVG  270 (320)
T ss_pred             HHHHHHhC
Confidence            99998885

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-38  Score=268.02  Aligned_cols=241  Identities=22%  Similarity=0.252  Sum_probs=212.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++.|+++++||+..|||+++++.|++.|++||.++|+++.+..+.++.                    +.-+..+..|+
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--------------------p~~I~Pi~~Dl   62 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--------------------PSLIIPIVGDL   62 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--------------------CcceeeeEecc
Confidence            4678999999999999999999999999999999999999988777653                    34588999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++++.+.+.+..    .+++|.||||||+.. ..|+.+.+.+++++.|++|+.+++++.|...+.+..+..+|.|||+||
T Consensus        63 s~wea~~~~l~~----v~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSS  137 (245)
T KOG1207|consen   63 SAWEALFKLLVP----VFPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSS  137 (245)
T ss_pred             cHHHHHHHhhcc----cCchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecc
Confidence            998887776554    378999999999987 789999999999999999999999999998888877767899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+..+...||++|+|+.+++++|+.|+++++||||+|+|-.|.|+|.++.-....+        .....++.+++
T Consensus       138 q-as~R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K--------~k~mL~riPl~  208 (245)
T KOG1207|consen  138 Q-ASIRPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK--------KKKMLDRIPLK  208 (245)
T ss_pred             h-hcccccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh--------ccchhhhCchh
Confidence            8 78889999999999999999999999999999999999999999999998764332211        22345677889


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |+...+++.+++.||.|+...+.+|..+..+|++.
T Consensus       209 rFaEV~eVVnA~lfLLSd~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  209 RFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             hhhHHHHHHhhheeeeecCcCcccCceeeecCCcc
Confidence            99999999999999999999999999998888874

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=4.7e-37  Score=288.07  Aligned_cols=242  Identities=20%  Similarity=0.271  Sum_probs=197.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||+++||||++|||+++|++|+++|++|++.+|+.++.                            .++.+++||++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------------------~~~~~~~~D~~   54 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------------------NDVDYFKVDVS   54 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------------------CceEEEEccCC
Confidence            57899999999999999999999999999999999985421                            24778999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.++++++|++|||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+++ +.|+||++||.
T Consensus        55 ~~~~i~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~  132 (258)
T PRK06398         55 NKEQVIKGIDYVISKYGRIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASV  132 (258)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcc
Confidence            999999999999999999999999999965 6788899999999999999999999999999999876 47899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchh-hhhhhhhccCHHHHHHHHhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQMFNIICELPETVARTLVP  288 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~pe~vA~~~l~  288 (388)
                       ++..+.++...|++||+|+++|+++++.|+.+. |+||+|+||+++|++......... ...........+.....+++
T Consensus       133 -~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (258)
T PRK06398        133 -QSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMK  210 (258)
T ss_pred             -hhccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcC
Confidence             677788889999999999999999999999886 999999999999998643211000 00000000000011223456


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++..|++++..+.||+++...+.++..+..||+..
T Consensus       211 ~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        211 RVGKPEEVAYVVAFLASDLASFITGECVTVDGGLR  245 (258)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCCCCcEEEECCccc
Confidence            67788899999999999887777777777777753

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=282.92  Aligned_cols=248  Identities=25%  Similarity=0.351  Sum_probs=203.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||.++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++++|+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   65 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE-----------------AGGEALFVACDV   65 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCC
Confidence            457899999999999999999999999999999999999888777666644                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+.+|++|++|||||...+..++.+.+.+++++++++|+.+++.++++++|.|.++ +.++||++||
T Consensus        66 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS  144 (253)
T PRK06172         66 TRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTAS  144 (253)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence            999999999999999999999999999986534557788999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.++...|++||+|+++|+++++.|+.++||+||+|+||+|+|++......... ....      ......+..
T Consensus       145 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~-~~~~------~~~~~~~~~  216 (253)
T PRK06172        145 V-AGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADP-RKAE------FAAAMHPVG  216 (253)
T ss_pred             h-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccCh-HHHH------HHhccCCCC
Confidence            7 6777888899999999999999999999999999999999999999998654221000 0000      001112345


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +...|++++..+.||+++...+.+|..+..||++
T Consensus       217 ~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        217 RIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             CccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            5667788888888888887666666666655553

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.3e-36  Score=282.55  Aligned_cols=245  Identities=22%  Similarity=0.304  Sum_probs=197.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||.++|++|+++|++|++++|+..  ++..+.+.+                 .+.++.++++|+
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-----------------~~~~~~~~~~D~   61 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-----------------LGRRFLSLTADL   61 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-----------------cCCceEEEECCC
Confidence            3578999999999999999999999999999999999752  233333332                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++++++.++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|.+++..|+||++||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  140 (248)
T TIGR01832        62 SDIEAIKALVDSAVEEFGHIDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS  140 (248)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence            9999999999999999999999999999976 467778899999999999999999999999999987644689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.+....|++||+++.++++++++|+.++||+||+|+||+++|++........ . .      ..+...+.+.+
T Consensus       141 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~-~------~~~~~~~~~~~  211 (248)
T TIGR01832       141 M-LSFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADE-D-R------NAAILERIPAG  211 (248)
T ss_pred             H-HhccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccCh-H-H------HHHHHhcCCCC
Confidence            7 566777788899999999999999999999999999999999999999764321110 0 0      01111122344


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..|++++..+.|++++...+.++..+..||++
T Consensus       212 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       212 RWGTPDDIGGPAVFLASSASDYVNGYTLAVDGGW  245 (248)
T ss_pred             CCcCHHHHHHHHHHHcCccccCcCCcEEEeCCCE
Confidence            5667777777778888877666666666666665

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-35  Score=276.00  Aligned_cols=214  Identities=20%  Similarity=0.243  Sum_probs=184.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||+++|++|+ +|++|++++|+.++++++.+++++.                .+.++.+++||++|+++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~d~~~   63 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR----------------GATSVHVLSFDAQDLDT   63 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc----------------cCCceEEEEcccCCHHH
Confidence            579999999999999999999 5999999999999998888877652                12357889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.+.+|++|++|||||... ..+..+.+.+.+++++++|+.+++.+++.++|.|.+++.+|+||++||. ++.
T Consensus        64 v~~~~~~~~~~~g~id~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~  141 (246)
T PRK05599         64 HRELVKQTQELAGEISLAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSI-AGW  141 (246)
T ss_pred             HHHHHHHHHHhcCCCCEEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecc-ccc
Confidence            99999999999999999999999865 3445567778889999999999999999999999876446899999998 677


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhc
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~  293 (388)
                      .+.++...|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.......       ....+||++|+.++..+...
T Consensus       142 ~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~-------~~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        142 RARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA-------PMSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             cCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC-------CCCCCHHHHHHHHHHHHhcC
Confidence            78888999999999999999999999999999999999999999986432211       11247999999999887653

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=285.20  Aligned_cols=247  Identities=23%  Similarity=0.239  Sum_probs=201.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.                .+.++.++.+|+
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~   66 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA----------------HGVDVAVHALDL   66 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCceEEEEecC
Confidence            4578999999999999999999999999999999999998888777776542                235688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|++++++++++    ++++|++|||||... ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        67 ~~~~~~~~~~~~----~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss  140 (259)
T PRK06125         67 SSPEAREQLAAE----AGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG  140 (259)
T ss_pred             CCHHHHHHHHHH----hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence            999999888764    479999999999875 5788899999999999999999999999999999877 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH----HHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE----TVAR  284 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe----~vA~  284 (388)
                      . .+..+.+.+..|+++|+|+++|+++++.|+.++||+||+|+||+++|++...........   .+ .+++    ...+
T Consensus       141 ~-~~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~---~~-~~~~~~~~~~~~  215 (259)
T PRK06125        141 A-AGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARA---EL-GDESRWQELLAG  215 (259)
T ss_pred             c-cccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhc---cc-CCHHHHHHHhcc
Confidence            7 566777788899999999999999999999999999999999999999753211100000   00 0111    1122


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++++..|++++..+.||+++...+.+|..+..||++
T Consensus       216 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        216 LPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             CCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence            34456677888888888999888877788777777765

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-36  Score=274.19  Aligned_cols=189  Identities=15%  Similarity=0.149  Sum_probs=170.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++                 .+.++..+.+|+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~-----------------~~~~~~~~~~D~   63 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSA-----------------LTDNVYSFQLKD   63 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCCeEEEEccC
Confidence            467899999999999999999999999999999999999999888777754                 234577899999


Q ss_pred             CCHHHHHHHHHHHHhhcC-CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g-~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +|+++++++++++.+++| ++|++|||||...+..++.+.+.+++.+.+++|+.+++.+++.++|+|++++++|+||++|
T Consensus        64 ~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~is  143 (227)
T PRK08862         64 FSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVI  143 (227)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence            999999999999999999 9999999998654356788899999999999999999999999999998765578999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      |. .+   .+++..|++||+|+.+|+++|+.|++++|||||+|+||+++|+
T Consensus       144 S~-~~---~~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        144 SH-DD---HQDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             cC-CC---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            86 32   3567889999999999999999999999999999999999998

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=283.43  Aligned_cols=245  Identities=25%  Similarity=0.357  Sum_probs=203.8

Q ss_pred             CCCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTR-GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~-GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++|+++||||++ |||+++|+.|+++|++|++++|+.+++++..+++++..+               ..++..+++|+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~Dl   78 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELG---------------LGRVEAVVCDV   78 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcC---------------CceEEEEEccC
Confidence            45689999999985 999999999999999999999999888877777654321               24688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++++.+.+|++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.|++++..|+|++++|
T Consensus        79 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss  157 (262)
T PRK07831         79 TSEAQVDALIDAAVERLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNAS  157 (262)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence            9999999999999999999999999999866 577888999999999999999999999999999987744789999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.++...|+++|+|+++++++++.|++++||+||+|+||+++||+.......  ....       ....+.+++
T Consensus       158 ~-~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~--~~~~-------~~~~~~~~~  227 (262)
T PRK07831        158 V-LGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSA--ELLD-------ELAAREAFG  227 (262)
T ss_pred             h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCH--HHHH-------HHHhcCCCC
Confidence            7 66777788899999999999999999999999999999999999999986432110  0000       011123456


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcC
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRG  320 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  320 (388)
                      +...|++++..+.||+++...+.+|..+..|+
T Consensus       228 r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        228 RAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            77788888999999999887777776665554

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-36  Score=282.56  Aligned_cols=244  Identities=28%  Similarity=0.411  Sum_probs=193.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++.+|+.++.   .+++.+                   ..+.++++|+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~-------------------~~~~~~~~Dl   60 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE-------------------KGVFTIKCDV   60 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh-------------------CCCeEEEecC
Confidence            467899999999999999999999999999999887765432   122221                   1367899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|.|+++ +.|+||++||
T Consensus        61 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS  138 (255)
T PRK06463         61 GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIAS  138 (255)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            9999999999999999999999999999865 5778888999999999999999999999999999876 4689999998


Q ss_pred             CCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchh-hhhhhhhccCHHHHHHHH
Q 016493          209 AGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQMFNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~-~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~pe~vA~~~  286 (388)
                      . ++. .+.++...|++||+|+++|+++++.|+.+.||+||+|+||+++|++......... ....      .....+.+
T Consensus       139 ~-~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~------~~~~~~~~  211 (255)
T PRK06463        139 N-AGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLR------ELFRNKTV  211 (255)
T ss_pred             H-HhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHH------HHHHhCCC
Confidence            7 343 3456778899999999999999999999999999999999999998643211100 0000      00111223


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++++..|++++..+.|++++...+.+|..+..||+..
T Consensus       212 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        212 LKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence            4556677778888888888777667777776666653

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.1e-36  Score=289.96  Aligned_cols=244  Identities=22%  Similarity=0.292  Sum_probs=198.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++||++|||||++|||+++|++|+++|++|++..|+.+  ..++..+.+++                 .+.++.++++|
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D  114 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-----------------EGRKAVALPGD  114 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-----------------cCCeEEEEecC
Confidence            478899999999999999999999999999999887643  33444444433                 24568889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++++.+.++++|+||||||......++.+.+.++|++++++|+.++++++++++|.|++   +++||++|
T Consensus       115 l~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~s  191 (300)
T PRK06128        115 LKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTG  191 (300)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEEC
Confidence            999999999999999999999999999998643567888999999999999999999999999999974   47999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.++...|++||+|+++|+++|+.|+.++||+||+|+||+++|++...... .....       ++.....++
T Consensus       192 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~-~~~~~-------~~~~~~~p~  262 (300)
T PRK06128        192 SI-QSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ-PPEKI-------PDFGSETPM  262 (300)
T ss_pred             Cc-cccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC-CHHHH-------HHHhcCCCC
Confidence            98 6777888889999999999999999999999999999999999999998532110 00000       111122345


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++..|++++..+.||+++...+.++..+..+|++
T Consensus       263 ~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        263 KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCE
Confidence            66777888888888888887767777777666654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=283.30  Aligned_cols=254  Identities=20%  Similarity=0.290  Sum_probs=201.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ++++++|+++||||++|||+++|++|+++|++|++.+|+.+++++..+++.+                 .+.++.++++|
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   67 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE-----------------LGIEAHGYVCD   67 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcC
Confidence            4678999999999999999999999999999999999999888877666643                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.++++|++|||||+.. ..++.+.+.+++++++++|+.+++.+++.++|+|+++ +.++||++|
T Consensus        68 l~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~is  145 (265)
T PRK07097         68 VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINIC  145 (265)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence            99999999999999999999999999999976 5778899999999999999999999999999999876 578999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.++...|+++|+++.++++++++|+.++||+||+|+||.++|++................  ........+.
T Consensus       146 S~-~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  222 (265)
T PRK07097        146 SM-MSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPF--DQFIIAKTPA  222 (265)
T ss_pred             Cc-cccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhH--HHHHHhcCCc
Confidence            87 56677788899999999999999999999999999999999999999976432110000000000  0000111223


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .++..|++++..+.|++++.....++..+..+|++.
T Consensus       223 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~  258 (265)
T PRK07097        223 ARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGIL  258 (265)
T ss_pred             cCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCce
Confidence            445566667777777776654444555555555543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=281.41  Aligned_cols=245  Identities=22%  Similarity=0.271  Sum_probs=204.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++.+|+++++++..+++++                 .+.++.++++|+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-----------------~~~~~~~~~~D~   68 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG-----------------QGLSAHALAFDV   68 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCceEEEEEccC
Confidence            357899999999999999999999999999999999999888777666643                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++++++++.|.|+++ +.|+||++||
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss  146 (255)
T PRK07523         69 TDHDAVRAAIDAFEAEIGPIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIAS  146 (255)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEEcc
Confidence            9999999999999999999999999999876 5788889999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.++...|+++|+++++++++++.|++++||+||+|+||+++|++.......  ....      +......++.
T Consensus       147 ~-~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~------~~~~~~~~~~  217 (255)
T PRK07523        147 V-QSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFS------AWLEKRTPAG  217 (255)
T ss_pred             c-hhccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHH------HHHHhcCCCC
Confidence            7 56677888999999999999999999999999999999999999999985432110  0000      1111123456


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      ++..++|++..+.||++++..+.++..+..+|+
T Consensus       218 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg  250 (255)
T PRK07523        218 RWGKVEELVGACVFLASDASSFVNGHVLYVDGG  250 (255)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            677788888888888888776666666655554

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4.6e-36  Score=280.69  Aligned_cols=247  Identities=25%  Similarity=0.372  Sum_probs=201.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl   69 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF---------------PEREVHGLAADV   69 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCCeEEEEECCC
Confidence            46789999999999999999999999999999999999988888777775431               135788999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|+++ +.++||++||
T Consensus        70 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS  147 (257)
T PRK09242         70 SDDEDRRAILDWVEDHWDGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGS  147 (257)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence            9999999999999999999999999999865 5677889999999999999999999999999999877 4689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|+++|++++.++++++.|+.+.||+||+|+||+++|++........  ..      ..+...+.++.
T Consensus       148 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~--~~------~~~~~~~~~~~  218 (257)
T PRK09242        148 V-SGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDP--DY------YEQVIERTPMR  218 (257)
T ss_pred             c-ccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCCh--HH------HHHHHhcCCCC
Confidence            7 677788888999999999999999999999999999999999999999864321110  00      01111223345


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      ++..+++++..+.|++++...+.++..+..+|+
T Consensus       219 ~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        219 RVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             CCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            556677777777788776554445555544443

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-36  Score=281.79  Aligned_cols=239  Identities=20%  Similarity=0.255  Sum_probs=190.2

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCC-----------hHHHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           50 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRS-----------SESVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        50 ~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~-----------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+           .+++++..+++++                 
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   65 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-----------------   65 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-----------------
Confidence            5789999999999  499999999999999999998643           2223333333332                 


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      .+.++.++++|++|.++++++++++.+.+|++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|++
T Consensus        66 ~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  144 (256)
T PRK12859         66 NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK  144 (256)
T ss_pred             cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence            3467889999999999999999999999999999999999866 578889999999999999999999999999999987


Q ss_pred             CCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhc
Q 016493          197 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC  276 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  276 (388)
                      + +.|+||++||. ++..+.+++..|++||+++.+|+++++.|+.++||+||+|+||+++|++.....   ...+..   
T Consensus       145 ~-~~g~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~---~~~~~~---  216 (256)
T PRK12859        145 K-SGGRIINMTSG-QFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEI---KQGLLP---  216 (256)
T ss_pred             c-CCeEEEEEccc-ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHH---HHHHHh---
Confidence            6 47899999998 677888899999999999999999999999999999999999999998643210   000000   


Q ss_pred             cCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          277 ELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       277 ~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                             ..+..++..|++++..+.|++++...+.++..+..||+
T Consensus       217 -------~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        217 -------MFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             -------cCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence                   11233445556666666677776655555655555554

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7e-36  Score=280.25  Aligned_cols=247  Identities=26%  Similarity=0.356  Sum_probs=201.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++|+++||||++|||+++|++|+++|++|++.+|+. +..++..++++.                 .+.++.++.+|
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   65 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-----------------AGGEAIAVKGD   65 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCeEEEEEec
Confidence            357899999999999999999999999999999988854 445555555543                 23568889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++.+.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|+|++++..|+||++|
T Consensus        66 l~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~s  144 (261)
T PRK08936         66 VTVESDVVNLIQTAVKEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMS  144 (261)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence            99999999999999999999999999999876 46778889999999999999999999999999999875578999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.++...|+++|+|+.+++++++.|+.+.||+||+|+||+++|++........ ...       .......++
T Consensus       145 S~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~-------~~~~~~~~~  215 (261)
T PRK08936        145 SV-HEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADP-KQR-------ADVESMIPM  215 (261)
T ss_pred             cc-cccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCH-HHH-------HHHHhcCCC
Confidence            97 677788889999999999999999999999999999999999999999854321100 000       000111234


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .++..+++++..+.||+++...+.++..+..|++.
T Consensus       216 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        216 GYIGKPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCc
Confidence            55667777888888888887767777766666654

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-36  Score=278.27  Aligned_cols=243  Identities=23%  Similarity=0.295  Sum_probs=194.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+                 .+.++.++++|++|++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   63 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ-----------------FPGQVLTVQMDVRNPE   63 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCHH
Confidence            68999999999999999999999999999999998888777666643                 2356889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|.++...|+|+++||. ++
T Consensus        64 ~~~~~~~~~~~~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~~  141 (252)
T PRK07677         64 DVQKMVEQIDEKFGRIDALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVAT-YA  141 (252)
T ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcCh-hh
Confidence            999999999999999999999999765 4677889999999999999999999999999999775456899999988 66


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH-HHHHhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLVPRI  290 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v-A~~~l~~~  290 (388)
                      ..+.+....|++||+|+++|+++|+.|+.+ +||+||+|+||+++|+......... ...       .+.. ...+++++
T Consensus       142 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~  213 (252)
T PRK07677        142 WDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWES-EEA-------AKRTIQSVPLGRL  213 (252)
T ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCC-HHH-------HHHHhccCCCCCC
Confidence            677788889999999999999999999975 6999999999999964321110000 000       0000 01123456


Q ss_pred             hhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          291 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       291 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+++++..+.||+++...+.++..+..+|++
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        214 GTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             CCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence            66777777777887776656666665555543

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=5e-36  Score=284.06  Aligned_cols=253  Identities=21%  Similarity=0.280  Sum_probs=197.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.                  .+.++.++++|+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl   75 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG------------------GEPNVCFFHCDV   75 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc------------------CCCceEEEEeec
Confidence            35689999999999999999999999999999999999877665554431                  124688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +|+++++++++.+.++++++|+||||||...+ ..++.+.+.+++++++++|+.++++++++++|.|.++ +.|+|++++
T Consensus        76 ~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~is  154 (280)
T PLN02253         76 TVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLC  154 (280)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEec
Confidence            99999999999999999999999999998542 2457788999999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH-HHH
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-RTL  286 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA-~~~  286 (388)
                      |. ++..+.++...|++||+|+++++++++.|++++||+||+|+||.++|++........... ............ ...
T Consensus       155 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  232 (280)
T PLN02253        155 SV-ASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERT-EDALAGFRAFAGKNAN  232 (280)
T ss_pred             Ch-hhcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccch-hhhhhhhHHHhhcCCC
Confidence            87 566666777899999999999999999999999999999999999999753321110000 000000000000 001


Q ss_pred             h-hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 V-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      + .+...++|++..+.|++++...+.++..+..||++
T Consensus       233 l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        233 LKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGF  269 (280)
T ss_pred             CcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence            1 22346777888888888887777777777777765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=2e-36  Score=266.73  Aligned_cols=221  Identities=29%  Similarity=0.396  Sum_probs=184.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||.+++||+.||||++++++|+++|..+.++.-+.+..+ ..++|++..               +..++.+++||+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~-a~akL~ai~---------------p~~~v~F~~~DV   64 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE-AIAKLQAIN---------------PSVSVIFIKCDV   64 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH-HHHHHhccC---------------CCceEEEEEecc
Confidence            4678999999999999999999999999998877777666644 445555543               457899999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEe
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNM  206 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~i  206 (388)
                      ++..++++.++++.+.+|.+|++|||||+..         +.+|++.+++|+.|.++-+..++|+|.++.  .+|-|||+
T Consensus        65 t~~~~~~~~f~ki~~~fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNm  135 (261)
T KOG4169|consen   65 TNRGDLEAAFDKILATFGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNM  135 (261)
T ss_pred             ccHHHHHHHHHHHHHHhCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEe
Confidence            9999999999999999999999999999953         456999999999999999999999999874  67899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccccccccCcc-----c----hhhhhhhhh
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGST-----I----QNKQMFNII  275 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~e--l~~~gI~vn~v~PG~v~T~~~~~~~~-----~----~~~~~~~~~  275 (388)
                      ||. .+..|.|..+.|++||+++.+|+|+|+.+  |.+.||++++||||+++|++......     .    ..+.+....
T Consensus       136 sSv-~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~  214 (261)
T KOG4169|consen  136 SSV-AGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP  214 (261)
T ss_pred             ccc-cccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc
Confidence            998 89999999999999999999999999876  55789999999999999998754311     1    111222233


Q ss_pred             ccCHHHHHHHHhhhhhhccc
Q 016493          276 CELPETVARTLVPRIRVVKG  295 (388)
Q Consensus       276 ~~~pe~vA~~~l~~~~~~~~  295 (388)
                      ..+|+.+++.+++.++.++.
T Consensus       215 ~q~~~~~a~~~v~aiE~~~N  234 (261)
T KOG4169|consen  215 KQSPACCAINIVNAIEYPKN  234 (261)
T ss_pred             cCCHHHHHHHHHHHHhhccC
Confidence            34677888888877765443

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=280.98  Aligned_cols=244  Identities=22%  Similarity=0.265  Sum_probs=199.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||+++|++|+++|++|++.+|++++.+                          ..++.++++|
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~~~~D   57 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------------------HENYQFVPTD   57 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------------------cCceEEEEcc
Confidence            35688999999999999999999999999999999999875431                          1357789999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCC--------CCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--------KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~--------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      ++|+++++++++++.+.++++|++|||||...+.        .++.+.+.++|++++++|+.+++.++++++|+|+++ +
T Consensus        58 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~  136 (266)
T PRK06171         58 VSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-H  136 (266)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-C
Confidence            9999999999999999999999999999985421        123467899999999999999999999999999876 4


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-ccccccCccchhhhhhhhhccC
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFNIICEL  278 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~  278 (388)
                      .++||++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++ |++.......   .........
T Consensus       137 ~g~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~---~~~~~~~~~  212 (266)
T PRK06171        137 DGVIVNMSSE-AGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEE---ALAYTRGIT  212 (266)
T ss_pred             CcEEEEEccc-cccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhh---hhccccCCC
Confidence            6899999998 6677788889999999999999999999999999999999999997 6654321100   000000001


Q ss_pred             HHHHH-------HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          279 PETVA-------RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       279 pe~vA-------~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++..       ..+++++..|+|++..+.||+++...+.++..+..||++
T Consensus       213 ~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        213 VEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             HHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence            11111       245678889999999999999998888899888888875

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=290.51  Aligned_cols=261  Identities=17%  Similarity=0.151  Sum_probs=186.5

Q ss_pred             ccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhh-hhhhcCCCCcccccCceEEEE
Q 016493           48 HCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKE-GMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        48 ~~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      ..+++||+++||||+  +|||+++|+.|+++|++|++.+|. ++++...+...+.... ......+.. .  ...++..+
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~   78 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSL-L--TFAKIYPM   78 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccch-h--hhhhHHHh
Confidence            357799999999995  999999999999999999998765 2222222211110000 000000000 0  00011111


Q ss_pred             EccCCC------------------HHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHH
Q 016493          125 ACDVCE------------------PADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSIL  185 (388)
Q Consensus       125 ~~Dls~------------------~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~  185 (388)
                      .+|+++                  .++++++++++.+++|++|+||||||.... ..++.+.+.++|++++++|+.|+++
T Consensus        79 ~~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~  158 (299)
T PRK06300         79 DASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVS  158 (299)
T ss_pred             hhhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHH
Confidence            222222                  246999999999999999999999997531 4678899999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch-hhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccC
Q 016493          186 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       186 l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~-~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~  263 (388)
                      ++++++|+|++   .|+|++++|. ++..+.|+.. .|++||+|+.+|+++|+.|+++ +|||||+|+||+++|++....
T Consensus       159 l~~a~~p~m~~---~G~ii~iss~-~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~  234 (299)
T PRK06300        159 LLSHFGPIMNP---GGSTISLTYL-ASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAI  234 (299)
T ss_pred             HHHHHHHHhhc---CCeEEEEeeh-hhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcc
Confidence            99999999974   3789999987 5666777764 8999999999999999999987 599999999999999985331


Q ss_pred             ccchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          264 STIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       264 ~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ...  ....      .....+.++.+...|++++..+.||+++...+.++..+..||++..
T Consensus       235 ~~~--~~~~------~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        235 GFI--ERMV------DYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             ccc--HHHH------HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            100  0000      0011123456667788888888999998887788887877877643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-36  Score=279.77  Aligned_cols=247  Identities=26%  Similarity=0.321  Sum_probs=193.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|++. .++..+++.+                 .+.++.++++|++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~-----------------~~~~~~~~~~D~~   66 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRA-----------------AGGEALALTADLE   66 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHh-----------------cCCeEEEEEEeCC
Confidence            468899999999999999999999999999999999853 3444444432                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|++|||||......++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.|+||++||.
T Consensus        67 ~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~  145 (260)
T PRK12823         67 TYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSI  145 (260)
T ss_pred             CHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCc
Confidence            99999999999999999999999999975434678889999999999999999999999999999877 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc--hhhhhhhhhccCHHH----HH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMFNIICELPET----VA  283 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~pe~----vA  283 (388)
                       ++.  .+....|++||+|+++|+++++.|++++||+||+|+||.|+||+.......  .......   ..++.    ..
T Consensus       146 -~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  219 (260)
T PRK12823        146 -ATR--GINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKA---WYQQIVDQTLD  219 (260)
T ss_pred             -ccc--CCCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccc---cHHHHHHHHhc
Confidence             332  234568999999999999999999999999999999999999863210000  0000000   00111    11


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      ..++++...|++++..+.||+++...+.++..+..||+
T Consensus       220 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        220 SSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             cCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            23456677888899888899888766666666655554

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.8e-35  Score=276.50  Aligned_cols=246  Identities=21%  Similarity=0.337  Sum_probs=201.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..++++.                 .+.++.++.+|
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   68 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQAFACRCD   68 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcc
Confidence            4567899999999999999999999999999999999998888877766644                 23468889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++.+.+.++++|++|||||... ..++ +.+.+++++.+++|+.++++++++++|+|.+. +.++||++|
T Consensus        69 ~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~is  145 (255)
T PRK06113         69 ITSEQELSALADFALSKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTIT  145 (255)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            99999999999999999999999999999865 3444 67889999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|+.+.||+||+|+||+++|++........   ..      .+.....++
T Consensus       146 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---~~------~~~~~~~~~  215 (255)
T PRK06113        146 SM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE---IE------QKMLQHTPI  215 (255)
T ss_pred             cc-cccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHH---HH------HHHHhcCCC
Confidence            97 677788888999999999999999999999999999999999999999864321100   00      001111233


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .++..|++++..+.|++++...+.++..+..+|++.
T Consensus       216 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence            455677777888888888777666777776666643

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-36  Score=279.38  Aligned_cols=247  Identities=22%  Similarity=0.351  Sum_probs=202.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++                    ..++.++++|+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~   61 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--------------------GPAAIAVSLDV   61 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEccC
Confidence            3578999999999999999999999999999999999988776654433                    23578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|.+++.+++||++||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  140 (257)
T PRK07067         62 TRQDSIDRIVAAAVERFGGIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS  140 (257)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            9999999999999999999999999999875 577888899999999999999999999999999987655689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH-----HH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-----VA  283 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-----vA  283 (388)
                      . .+..+.++...|++||+++++++++++.|+.++||+||+|+||+++|++........    .......+.+     ..
T Consensus       141 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~  215 (257)
T PRK07067        141 Q-AGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALF----ARYENRPPGEKKRLVGE  215 (257)
T ss_pred             H-HhCCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhh----hhccCCCHHHHHHHHhh
Confidence            7 566778889999999999999999999999999999999999999999764321100    0000001111     11


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      ..+++++..+++++..+.||+++...+.++..+..+|+
T Consensus       216 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        216 AVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             cCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            23456777888999999999988776666766666655

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.7e-36  Score=307.21  Aligned_cols=242  Identities=27%  Similarity=0.441  Sum_probs=201.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ...||+++||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++..+.+|++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~  325 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--------------------GDEHLSVQADIT  325 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEccCC
Confidence            457899999999999999999999999999999999988877655432                    235677899999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||...+..++.+.+.++|++++++|+.++++++++++|+|+   +.|+||++||.
T Consensus       326 ~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~iv~isS~  402 (520)
T PRK06484        326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS---QGGVIVNLGSI  402 (520)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc---cCCEEEEECch
Confidence            999999999999999999999999999864346788899999999999999999999999999993   35899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+++++|+++|+.|+.++||+||+|+||+|+|++............       .+.....++.+
T Consensus       403 -~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~-------~~~~~~~~~~~  474 (520)
T PRK06484        403 -ASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADF-------DSIRRRIPLGR  474 (520)
T ss_pred             -hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHH-------HHHHhcCCCCC
Confidence             6778888999999999999999999999999999999999999999998643211000000       01111223456


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +..|++++..+.||+++...+.++..+..||++
T Consensus       475 ~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        475 LGDPEEVAEAIAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            677888888888999887777788888777776

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-35  Score=282.02  Aligned_cols=195  Identities=24%  Similarity=0.288  Sum_probs=168.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~---------------~~~~v~~~~~D   73 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV---------------PDAKLSLRALD   73 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---------------CCCceEEEEec
Confidence            356789999999999999999999999999999999999999988888876532               12468899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++++.+.++++|+||||||+..  .+..+.+.++++.++++|+++++.+++.++|.|++.  .++||++|
T Consensus        74 l~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~--~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vs  149 (313)
T PRK05854         74 LSSLASVAALGEQLRAEGRPIHLLINNAGVMT--PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQS  149 (313)
T ss_pred             CCCHHHHHHHHHHHHHhCCCccEEEECCcccc--CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEe
Confidence            99999999999999999999999999999864  234467889999999999999999999999999865  57999999


Q ss_pred             CCCCCCC------------CCCCchhhHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGGS------------STPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~~------------~~~~~~~Y~aSK~al~~l~~~la~el--~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |.. +..            +.++...|+.||+|+..|++.|++++  .+.||+||+|+||+|+|++...
T Consensus       150 S~~-~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        150 SIA-ARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             chh-hcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence            873 322            23456789999999999999999864  4678999999999999998643

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=277.42  Aligned_cols=238  Identities=29%  Similarity=0.354  Sum_probs=196.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.++      .  .                 .+.++.++++|+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~-----------------~~~~~~~~~~D~   56 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V-----------------DGRPAEFHAADV   56 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h-----------------cCCceEEEEccC
Confidence            56789999999999999999999999999999999998754      0  0                 134678899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++.+.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++++.|.|.++++.|+||++||
T Consensus        57 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  135 (252)
T PRK07856         57 RDPDQVAALVDAIVERHGRLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS  135 (252)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            9999999999999999999999999999875 567788899999999999999999999999999987645689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+++++|+++++.|+.++ |+||+|+||+|+|++....... ....       .......++.
T Consensus       136 ~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~-~~~~-------~~~~~~~~~~  205 (252)
T PRK07856        136 V-SGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGD-AEGI-------AAVAATVPLG  205 (252)
T ss_pred             c-ccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccC-HHHH-------HHHhhcCCCC
Confidence            8 677788889999999999999999999999988 9999999999999975321110 0000       0001112345


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +...|++++..+.||+++...+.+|..+..||++
T Consensus       206 ~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~  239 (252)
T PRK07856        206 RLATPADIAWACLFLASDLASYVSGANLEVHGGG  239 (252)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence            5667788888888888887777777777777765

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=276.46  Aligned_cols=243  Identities=21%  Similarity=0.275  Sum_probs=197.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||+++||||++|||++++++|+++|++|++++|++++.                          ...++.++++|+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~   58 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------------------------LPEGVEFVAADL   58 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------------------------cCCceeEEecCC
Confidence            467899999999999999999999999999999999986431                          123578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCC-CCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +|+++++++++++.+.++++|++|||||... +..++.+.+.++|++++++|+.+++.++++++|.|+++ +.++||++|
T Consensus        59 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~is  137 (260)
T PRK06523         59 TTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVT  137 (260)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            9999999999999999999999999999743 13567788999999999999999999999999999987 468999999


Q ss_pred             CCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH--
Q 016493          208 GAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR--  284 (388)
Q Consensus       208 S~~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~--  284 (388)
                      |. .+..+.+ +...|+++|+++++|+++++.|+.++||+||+|+||+|+|++.......    .......++++..+  
T Consensus       138 S~-~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~  212 (260)
T PRK06523        138 SI-QRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAER----LAEAAGTDYEGAKQII  212 (260)
T ss_pred             cc-cccCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHH----HHhhcCCCHHHHHHHH
Confidence            97 5555544 7889999999999999999999999999999999999999975321110    00001112233222  


Q ss_pred             ------HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 ------TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ------~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                            .++++...+++++..+.||++++..+.++..+..||++.
T Consensus       213 ~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        213 MDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTV  257 (260)
T ss_pred             HHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCcc
Confidence                  245566788899999999999887778888787777653

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-34  Score=279.81  Aligned_cols=225  Identities=28%  Similarity=0.370  Sum_probs=192.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++                 .+.++.++++|+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~-----------------~g~~~~~v~~Dv   66 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA-----------------AGGEALAVVADV   66 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------cCCcEEEEEecC
Confidence            356789999999999999999999999999999999999988888777754                 345788999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++.+.+++|++|++|||||... ..++.+.+.+++++++++|+.+++++++.++|.|+++ +.|+||++||
T Consensus        67 ~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS  144 (334)
T PRK07109         67 ADAEAVQAAADRAEEELGPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGS  144 (334)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCC
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999987 4689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccccccccCccchhhhhh-hhhccCHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVART  285 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~--~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~pe~vA~~  285 (388)
                      . .+..+.+....|++||+++.+|+++++.|+..  .+|+|++|+||.++||+............. .....+|+++|+.
T Consensus       145 ~-~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~  223 (334)
T PRK07109        145 A-LAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADA  223 (334)
T ss_pred             h-hhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHH
Confidence            8 67778888999999999999999999999975  479999999999999976532111111000 1112479999999


Q ss_pred             Hhhhhhhc
Q 016493          286 LVPRIRVV  293 (388)
Q Consensus       286 ~l~~~~~~  293 (388)
                      ++..+..+
T Consensus       224 i~~~~~~~  231 (334)
T PRK07109        224 ILYAAEHP  231 (334)
T ss_pred             HHHHHhCC
Confidence            99887654

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-35  Score=278.24  Aligned_cols=221  Identities=23%  Similarity=0.333  Sum_probs=189.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++..                  +.++..+++|+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~------------------~~~~~~~~~Dv   66 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG------------------DDRVLTVVADV   66 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC------------------CCcEEEEEecC
Confidence            467899999999999999999999999999999999999888777665421                  24577788999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+.++++|++|||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|.++  .|+||++||
T Consensus        67 ~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS  143 (296)
T PRK05872         67 TDLAAMQAAAEEAVERFGGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSS  143 (296)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeC
Confidence            9999999999999999999999999999976 6788999999999999999999999999999999875  489999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc--hhhhhhh------hhccCHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMFN------IICELPE  280 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~------~~~~~pe  280 (388)
                      . ++..+.++...|++||+++++|+++++.|+.++||+||+|+||+++|++.......  ....+..      ....+|+
T Consensus       144 ~-~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  222 (296)
T PRK05872        144 L-AAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVE  222 (296)
T ss_pred             H-hhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHH
Confidence            8 67788889999999999999999999999999999999999999999987543221  0000110      1124799


Q ss_pred             HHHHHHhhhhh
Q 016493          281 TVARTLVPRIR  291 (388)
Q Consensus       281 ~vA~~~l~~~~  291 (388)
                      ++|+.++..+.
T Consensus       223 ~va~~i~~~~~  233 (296)
T PRK05872        223 KCAAAFVDGIE  233 (296)
T ss_pred             HHHHHHHHHHh
Confidence            99998887665

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=272.41  Aligned_cols=217  Identities=27%  Similarity=0.358  Sum_probs=190.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++.+|+++++++..+++                     .++.++.+|+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~   59 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---------------------GLVVGGPLDV   59 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------------------ccceEEEccC
Confidence            3567899999999999999999999999999999999998877655443                     1367789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||+.. ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.|+||++||
T Consensus        60 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS  137 (273)
T PRK07825         60 TDPASFAAFLDAVEADLGPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVAS  137 (273)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence            9999999999999999999999999999976 6788889999999999999999999999999999987 4789999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+++.+|+++++.|+.+.||+|++|+||+++|++.......     ......+|+++|+.++.
T Consensus       138 ~-~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~va~~~~~  211 (273)
T PRK07825        138 L-AGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA-----KGFKNVEPEDVAAAIVG  211 (273)
T ss_pred             c-cccCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc-----cCCCCCCHHHHHHHHHH
Confidence            8 67788899999999999999999999999999999999999999999986543211     11224589999999998


Q ss_pred             hhhhcc
Q 016493          289 RIRVVK  294 (388)
Q Consensus       289 ~~~~~~  294 (388)
                      .+..+.
T Consensus       212 ~l~~~~  217 (273)
T PRK07825        212 TVAKPR  217 (273)
T ss_pred             HHhCCC
Confidence            876543

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=281.40  Aligned_cols=233  Identities=20%  Similarity=0.240  Sum_probs=187.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++|||| +|||+++|++|+ +|++|++++|+.+++++..+++++                 .+.++.++++|++|++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d~~   62 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE-----------------AGFDVSTQEVDVSSRE   62 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEeecCCHH
Confidence            589999998 699999999996 899999999998888777666643                 2356888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++ ++++++|++|||||+..        ..+++++++++|+.+++++++.++|.|+++   |++|++||. ++
T Consensus        63 ~i~~~~~~~-~~~g~id~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---g~iv~isS~-~~  129 (275)
T PRK06940         63 SVKALAATA-QTLGPVTGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAPG---GAGVVIASQ-SG  129 (275)
T ss_pred             HHHHHHHHH-HhcCCCCEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC---CCEEEEEec-cc
Confidence            999999988 56899999999999742        236799999999999999999999999753   678888887 33


Q ss_pred             CCCC------------------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          213 GSST------------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       213 ~~~~------------------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ..+.                              ++...|++||+|+.+++++++.|+.++|||||+|+||+++|++...
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~  209 (275)
T PRK06940        130 HRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD  209 (275)
T ss_pred             ccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence            3321                              2467899999999999999999999999999999999999998643


Q ss_pred             CccchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          263 GSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       263 ~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..........      ....+..+++++..|++++..+.||+++...+.++..+..||++.
T Consensus       210 ~~~~~~~~~~------~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        210 ELNGPRGDGY------RNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             hhcCCchHHH------HHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeE
Confidence            2110000000      011223456778889999999999999988889998888888863

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=274.10  Aligned_cols=226  Identities=21%  Similarity=0.307  Sum_probs=189.6

Q ss_pred             hhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEE
Q 016493           43 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  122 (388)
Q Consensus        43 ~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  122 (388)
                      ...++.+++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.
T Consensus        30 ~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~-----------------~~~~~~   92 (293)
T PRK05866         30 RPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-----------------AGGDAM   92 (293)
T ss_pred             CCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEE
Confidence            344456788999999999999999999999999999999999999888877776643                 234678


Q ss_pred             EEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCC--CHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 016493          123 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF--TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  200 (388)
Q Consensus       123 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~--~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  200 (388)
                      ++++|++|.++++++++++.+.++++|++|||||... ..++.+.  +.++++.++++|+.|++.++++++|.|+++ +.
T Consensus        93 ~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~  170 (293)
T PRK05866         93 AVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GD  170 (293)
T ss_pred             EEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence            8999999999999999999999999999999999876 3454443  457889999999999999999999999887 46


Q ss_pred             cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH
Q 016493          201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  280 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  280 (388)
                      |+||++||.+....+.++...|++||+|+++|+++++.|+.++||+|++|+||+|+|++.......     ......+||
T Consensus       171 g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-----~~~~~~~pe  245 (293)
T PRK05866        171 GHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-----DGLPALTAD  245 (293)
T ss_pred             cEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-----cCCCCCCHH
Confidence            899999986322224677889999999999999999999999999999999999999987532111     112235899


Q ss_pred             HHHHHHhhhhhh
Q 016493          281 TVARTLVPRIRV  292 (388)
Q Consensus       281 ~vA~~~l~~~~~  292 (388)
                      ++|+.+++.+..
T Consensus       246 ~vA~~~~~~~~~  257 (293)
T PRK05866        246 EAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHhc
Confidence            999999988864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-35  Score=275.29  Aligned_cols=247  Identities=24%  Similarity=0.310  Sum_probs=201.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++                 .+.++.++.+|
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   68 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-----------------AGGAAEALAFD   68 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcc
Confidence            5678999999999999999999999999999999999999888877776654                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|++++.++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.+++|++|
T Consensus        69 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~s  146 (256)
T PRK06124         69 IADEEAVAAAFARIDAEHGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRIIAIT  146 (256)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            99999999999999999999999999999876 5778889999999999999999999999999999877 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.++...|+++|+++.++++.++.|+.+.||+||+|+||+++|++.......  .....      ......++
T Consensus       147 s~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~------~~~~~~~~  217 (256)
T PRK06124        147 SI-AGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD--PAVGP------WLAQRTPL  217 (256)
T ss_pred             ec-hhccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC--hHHHH------HHHhcCCC
Confidence            87 67778888999999999999999999999999999999999999999975432110  01000      00011123


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++...+++++..+.||+++...+.+|..+..||++
T Consensus       218 ~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        218 GRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence            34455666666677777776655566665555554

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3.8e-35  Score=274.56  Aligned_cols=241  Identities=20%  Similarity=0.270  Sum_probs=194.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|+++||||++|||+++|++|+++|++|+++.| +.+.++++.++++.                 .+.+++++.+|++|+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~   64 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-----------------HGVRAEIRQLDLSDL   64 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------cCCceEEEEccCCCH
Confidence            689999999999999999999999999998864 55666666666544                 245788999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++++.|+|.++++.|+||++||. .
T Consensus        65 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~-~  142 (256)
T PRK12743         65 PEGAQALDKLIQRLGRIDVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSV-H  142 (256)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeec-c
Confidence            9999999999999999999999999876 4677888999999999999999999999999999876556899999987 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      +..+.++...|+++|+++.+++++++.++.++||+||+|+||+++|++.............          ...++.+..
T Consensus       143 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~----------~~~~~~~~~  212 (256)
T PRK12743        143 EHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSR----------PGIPLGRPG  212 (256)
T ss_pred             ccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHH----------hcCCCCCCC
Confidence            7778888999999999999999999999999999999999999999986432111000000          011233445


Q ss_pred             hccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          292 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       292 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++++..+.|++++...+.++..+..||++
T Consensus       213 ~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        213 DTHEIASLVAWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            5666666666777766656666666666664

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.1e-35  Score=277.31  Aligned_cols=237  Identities=25%  Similarity=0.305  Sum_probs=190.9

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ....++.|++++||||++|||+++|++|+++|++|++.+||.++.+++.+++++..               ....+.+++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~---------------~~~~i~~~~   92 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK---------------ANQKIRVIQ   92 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCceEEEE
Confidence            35678899999999999999999999999999999999999999999999987732               346899999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      ||++|.++|+++++++.+.++++|++|||||+..   +....+.|.+|.++.+|++|++.+++.++|.|+++. ++|||+
T Consensus        93 lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~---~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~  168 (314)
T KOG1208|consen   93 LDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMA---PPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVN  168 (314)
T ss_pred             CCCCCHHHHHHHHHHHHhcCCCccEEEeCccccc---CCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEE
Confidence            9999999999999999999999999999999965   333778899999999999999999999999999884 499999


Q ss_pred             ecCCCCCCCC------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc---hhhh
Q 016493          206 MDGAGSGGSS------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI---QNKQ  270 (388)
Q Consensus       206 isS~~~~~~~------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~  270 (388)
                      +||..+....            +....+|+.||.++..+++.|++.+.+ ||.+++++||.|.|+........   ....
T Consensus       169 vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~  247 (314)
T KOG1208|consen  169 VSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNLLLRLLAKK  247 (314)
T ss_pred             EcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchHHHHHHHHH
Confidence            9997431100            223346999999999999999999988 99999999999999933331111   1111


Q ss_pred             hhhhhccCHHHHHHHHhhhhhhccccccceee
Q 016493          271 MFNIICELPETVARTLVPRIRVVKGSGKAINY  302 (388)
Q Consensus       271 ~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~  302 (388)
                      +...+..++++.|+..+.....|+-......|
T Consensus       248 l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  248 LSWPLTKSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             HHHHhccCHHHHhhheehhccCccccCccccc
Confidence            22222246778888777766666443333333

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-35  Score=274.67  Aligned_cols=247  Identities=26%  Similarity=0.319  Sum_probs=200.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+ .++..+++..                 .+.++.++++|++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~-----------------~~~~~~~~~~Dl~   64 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCG-----------------RGHRCTAVVADVR   64 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHH-----------------hCCceEEEECCCC
Confidence            467899999999999999999999999999999999874 3344444432                 2356788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      ++++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  142 (263)
T PRK08226         65 DPASVAAAIKRAKEKEGRIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSV  142 (263)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEECcH
Confidence            999999999999999999999999999876 5778888999999999999999999999999999876 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH-----H
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----R  284 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA-----~  284 (388)
                      .+...+.++...|+++|+++++++++++.|+.++||+||+|+||.++|++..........       ..++.+.     .
T Consensus       143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~  215 (263)
T PRK08226        143 TGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP-------EDPESVLTEMAKA  215 (263)
T ss_pred             HhcccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-------CCcHHHHHHHhcc
Confidence            333456677889999999999999999999999999999999999999986432110000       0111111     1


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .++.++..|++++..+.||+++...+.++..+..||+..
T Consensus       216 ~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        216 IPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             CCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCcc
Confidence            234556788888888889998887777888877777764

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-35  Score=272.98  Aligned_cols=242  Identities=24%  Similarity=0.348  Sum_probs=196.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||.++|++|+++|++|++++|+.+.. +...++                   .+.++.++++|+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~-------------------~~~~~~~~~~Dl   70 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL-------------------LGGNAKGLVCDV   70 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-------------------hCCceEEEEecC
Confidence            578899999999999999999999999999999999987642 222222                   124567899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++++++.+.|.|+++ +.++||++||
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  148 (255)
T PRK06841         71 SDSQSVEAAVAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLAS  148 (255)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEcc
Confidence            9999999999999999999999999999876 5777888999999999999999999999999999877 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.+....|+++|+++++++++++.|++++||+||+|+||+|+|++..........         .+.....+..
T Consensus       149 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~---------~~~~~~~~~~  218 (255)
T PRK06841        149 Q-AGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKG---------ERAKKLIPAG  218 (255)
T ss_pred             h-hhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHH---------HHHHhcCCCC
Confidence            7 56678888999999999999999999999999999999999999999986432111000         0011112344


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..+++++..+.|++++...+.+|..+..||++
T Consensus       219 ~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        219 RFAYPEEIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            5566777777777788777666677666666665

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=3.5e-34  Score=276.41  Aligned_cols=190  Identities=22%  Similarity=0.277  Sum_probs=164.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.                     .+.++++|
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~---------------------~v~~~~~D   79 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID---------------------GVEVVMLD   79 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---------------------hCeEEEcc
Confidence            356789999999999999999999999999999999999888776655442                     26779999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++++.+.++++|+||||||+..   +..+.+.++++..+++|+.+++.++++++|.|+++ +.++||++|
T Consensus        80 l~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vS  155 (315)
T PRK06196         80 LADLESVRAFAERFLDSGRRIDILINNAGVMA---CPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALS  155 (315)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCEEEECCCCCC---CCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEEC
Confidence            99999999999999999999999999999854   22456678899999999999999999999999877 468999999


Q ss_pred             CCCCCC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~-----------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |.+...           .+.++...|++||++++.+++.+++++.++||+||+|+||++.|++...
T Consensus       156 S~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~  221 (315)
T PRK06196        156 SAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRH  221 (315)
T ss_pred             CHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcccc
Confidence            863211           2334567899999999999999999999999999999999999998654

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1e-34  Score=279.25  Aligned_cols=188  Identities=18%  Similarity=0.210  Sum_probs=160.0

Q ss_pred             EEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           57 VITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        57 lITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |||||++|||+++|++|+++| ++|++++|+.++++++.+++..                 .+.++.++++|++|.++++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~d~~~v~   63 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-----------------PKDSYTVMHLDLASLDSVR   63 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-----------------CCCeEEEEEecCCCHHHHH
Confidence            699999999999999999999 9999999998887776665532                 2346888999999999999


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEecCCCCCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAGSGGS  214 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS~~~~~~  214 (388)
                      ++++++.+.++++|+||||||+..+..+..+.+.++|++++++|+.|++.+++.++|.|++++. +|+||++||.. +..
T Consensus        64 ~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~-~~~  142 (308)
T PLN00015         64 QFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSIT-GNT  142 (308)
T ss_pred             HHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccc-ccc
Confidence            9999999888999999999998643345678899999999999999999999999999987632 58999999973 321


Q ss_pred             C-----------------------------------CCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcc-cc
Q 016493          215 S-----------------------------------TPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMV-LT  257 (388)
Q Consensus       215 ~-----------------------------------~~~~~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v-~T  257 (388)
                      +                                   .++..+|++||+|+..+++.+++++.+ .||+||+|+||+| .|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  222 (308)
T PLN00015        143 NTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT  222 (308)
T ss_pred             ccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence            0                                   124577999999999999999999975 6999999999999 78


Q ss_pred             ccccc
Q 016493          258 DLLLS  262 (388)
Q Consensus       258 ~~~~~  262 (388)
                      ++...
T Consensus       223 ~~~~~  227 (308)
T PLN00015        223 GLFRE  227 (308)
T ss_pred             ccccc
Confidence            88654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=6.2e-34  Score=274.61  Aligned_cols=268  Identities=16%  Similarity=0.118  Sum_probs=193.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++++++.+++..                 .+.++.++.+|++|
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~   64 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-----------------PKDSYTIMHLDLGS   64 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-----------------CCCeEEEEEcCCCC
Confidence            37899999999999999999999999 9999999999888776665531                 23567889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEEEEecCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGA  209 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~Iv~isS~  209 (388)
                      .++++++++++.+.++++|++|||||+..+..+..+.+.+++++++++|+.+++.+++.++|.|++++ +.++||++||.
T Consensus        65 ~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~  144 (314)
T TIGR01289        65 LDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSI  144 (314)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecC
Confidence            99999999999888899999999999854333445678999999999999999999999999998763 25899999997


Q ss_pred             CCCC--------------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcc-
Q 016493          210 GSGG--------------------------------SSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMV-  255 (388)
Q Consensus       210 ~~~~--------------------------------~~~~~~~~Y~aSK~al~~l~~~la~el~-~~gI~vn~v~PG~v-  255 (388)
                      .+..                                .+..+...|++||+|+..+++.|++++. +.||+|++|+||.| 
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~  224 (314)
T TIGR01289       145 TGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIA  224 (314)
T ss_pred             ccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence            3311                                0112456799999999999999999985 46899999999999 


Q ss_pred             cccccccCccchhh---hhhhh---hccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccccccc
Q 016493          256 LTDLLLSGSTIQNK---QMFNI---ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRA  329 (388)
Q Consensus       256 ~T~~~~~~~~~~~~---~~~~~---~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~  329 (388)
                      +|++..+.......   .+...   ...+|++.|+.++..+..+.. .....|+......         .+...+.....
T Consensus       225 ~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~~~~---------~~~~~~~~~~~  294 (314)
T TIGR01289       225 DTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGNRQ---------ESFVNQLSEEV  294 (314)
T ss_pred             CCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecCCcc---------cccccCCChhh
Confidence            69987542211100   00000   124677787777765544332 1233344321110         00000112222


Q ss_pred             hhccchhhhhccccccc
Q 016493          330 LYAAEADRIRNWAENRA  346 (388)
Q Consensus       330 ~~~~~~~~~~~w~e~~~  346 (388)
                      ......+++|+|.|+..
T Consensus       295 ~~~~~~~~lw~~~~~~~  311 (314)
T TIGR01289       295 SDDSKASKMWDLSEKLV  311 (314)
T ss_pred             cCHHHHHHHHHHHHHHh
Confidence            34446678999887653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=269.63  Aligned_cols=246  Identities=20%  Similarity=0.298  Sum_probs=204.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..++++|+++||||++|||+++|++|+++|++|++++|++++++++..++..                 .+.++.++.+|
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   66 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEA-----------------EGGAAHVVSLD   66 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEec
Confidence            3567899999999999999999999999999999999999988777766643                 23468889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-------C
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-------G  200 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-------~  200 (388)
                      +++.++++++++++.+.++++|++|||||... ..++.+.+.++++.++++|+.+++.++++++|.|.++..       .
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (258)
T PRK06949         67 VTDYQSIKAAVAHAETEAGTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPG  145 (258)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCC
Confidence            99999999999999999999999999999865 567778889999999999999999999999999986632       4


Q ss_pred             cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH
Q 016493          201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  280 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  280 (388)
                      +++|++||. .+..+.+....|+++|++++.++++++.|+.+.||+||+|+||+|+|++.........          ..
T Consensus       146 g~iv~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~  214 (258)
T PRK06949        146 GRIINIASV-AGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQ----------GQ  214 (258)
T ss_pred             eEEEEECcc-cccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHH----------HH
Confidence            799999987 5667778889999999999999999999999999999999999999998643211100          00


Q ss_pred             HH-HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          281 TV-ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       281 ~v-A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .. ...+..++..|++++..+.||+++...+.+|..+..||++
T Consensus       215 ~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        215 KLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            11 1113346778888888889999988777777777766654

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-33  Score=293.02  Aligned_cols=227  Identities=24%  Similarity=0.339  Sum_probs=196.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ...+++++++||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++.+|
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D  372 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRA-----------------AGAVAHAYRVD  372 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcC
Confidence            3567789999999999999999999999999999999999988888777654                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.+|++|++|||||+.. .+++.+.+.+++++++++|+.|+++++++++|.|++++.+|+||++|
T Consensus       373 v~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~s  451 (582)
T PRK05855        373 VSDADAMEAFAEWVRAEHGVPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVA  451 (582)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            99999999999999999999999999999976 57888999999999999999999999999999999875568999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc----h-hh----hh---hhhh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI----Q-NK----QM---FNII  275 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~----~-~~----~~---~~~~  275 (388)
                      |. ++..+.++...|++||+|+++|+++|+.|++++||+|++|+||+|+|++.......    . ..    ..   ....
T Consensus       452 S~-~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (582)
T PRK05855        452 SA-AAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRR  530 (582)
T ss_pred             Ch-hhccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcccc
Confidence            98 67888889999999999999999999999999999999999999999987643210    0 00    00   0112


Q ss_pred             ccCHHHHHHHHhhhhhhc
Q 016493          276 CELPETVARTLVPRIRVV  293 (388)
Q Consensus       276 ~~~pe~vA~~~l~~~~~~  293 (388)
                      ..+||++|+.++..+...
T Consensus       531 ~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        531 GYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             CCCHHHHHHHHHHHHHcC
Confidence            247999999999888653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.5e-34  Score=275.37  Aligned_cols=240  Identities=24%  Similarity=0.281  Sum_probs=190.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..+++||+++||||++|||+++|++|+++|++|++.+|+ .+++++..+++++                 .+.++.++.+
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-----------------~g~~~~~~~~   69 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-----------------AGAKAVAVAG   69 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-----------------cCCeEEEEeC
Confidence            367899999999999999999999999999999999875 4456666666654                 2457889999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC------CC
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP------KG  200 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------~~  200 (388)
                      |++|.++++++++.+.+ +|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|+++.      ..
T Consensus        70 Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~  147 (306)
T PRK07792         70 DISQRATADELVATAVG-LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVY  147 (306)
T ss_pred             CCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCC
Confidence            99999999999999988 999999999999976 46778889999999999999999999999999997541      13


Q ss_pred             cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh-hhhhhccCH
Q 016493          201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-MFNIICELP  279 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~p  279 (388)
                      |+||++||. ++..+.++...|+++|+|+++|+++++.|+.++||+||+|+|| +.|++........... .......  
T Consensus       148 g~iv~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~~~~~~~~--  223 (306)
T PRK07792        148 GRIVNTSSE-AGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEAGGIDPL--  223 (306)
T ss_pred             cEEEEECCc-ccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhhhhccCCC--
Confidence            799999987 5677778889999999999999999999999999999999999 4888753221110000 0000111  


Q ss_pred             HHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          280 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       280 e~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                                  .|++++..+.||+++.....+|..+..+|++
T Consensus       224 ------------~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        224 ------------SPEHVVPLVQFLASPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             ------------CHHHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence                        3445555556777766555666666666654

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=270.55  Aligned_cols=249  Identities=20%  Similarity=0.262  Sum_probs=198.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+.++.++.+|++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD-----------------LGRRALAVPTDIT   64 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCceEEEecCCC
Confidence            35789999999999999999999999999999999999888777666643                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|++|||||...+..++.+.+.+++++++++|+.+++.+++++.|.|+++  .++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~  142 (258)
T PRK07890         65 DEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSM  142 (258)
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEech
Confidence            99999999999999999999999999986544677888999999999999999999999999999875  3799999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH-----H
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----R  284 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA-----~  284 (388)
                       ....+.++...|+++|++++.++++++.|++++||+||+|+||++.||+...........    ...+.+...     +
T Consensus       143 -~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  217 (258)
T PRK07890        143 -VLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGK----YGVTVEQIYAETAAN  217 (258)
T ss_pred             -hhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccc----cCCCHHHHHHHHhhc
Confidence             567788888999999999999999999999999999999999999999753211100000    000111111     1


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+.++..+++++..+.|++++.....++..+..++++
T Consensus       218 ~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        218 SDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             CCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            22344556677777777888766555555555555554

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3e-34  Score=249.03  Aligned_cols=187  Identities=26%  Similarity=0.377  Sum_probs=169.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++.|.++|||||++|||+++|++|.+.|-+||+++|++++++++.++.                     +.++...||+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~---------------------p~~~t~v~Dv   59 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---------------------PEIHTEVCDV   59 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC---------------------cchheeeecc
Confidence            4678999999999999999999999999999999999999998776543                     5588899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCc-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      .|.++.+++++++.++|+.+++||||||+....... .+...++.++.+++|+.+|++++++++|++.+++ .+.||++|
T Consensus        60 ~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVS  138 (245)
T COG3967          60 ADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVS  138 (245)
T ss_pred             cchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEec
Confidence            999999999999999999999999999997642222 3345567889999999999999999999999994 89999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      |. -+..|....+.||++|+|++.++.+|+..++..+|+|.-+.|..|+|+
T Consensus       139 SG-LafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         139 SG-LAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cc-cccCcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            86 788999999999999999999999999999999999999999999997

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=273.06  Aligned_cols=220  Identities=20%  Similarity=0.296  Sum_probs=180.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-------HHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++++                 .+.++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-----------------~~~~~   64 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA-----------------AGGQA   64 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh-----------------cCCce
Confidence            45789999999999999999999999999999999998653       3333333322                 23568


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      .++++|++++++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.|
T Consensus        65 ~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~g  142 (273)
T PRK08278         65 LPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-ENP  142 (273)
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-CCC
Confidence            89999999999999999999999999999999999866 5678889999999999999999999999999999987 468


Q ss_pred             EEEEecCCCCCCCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccccccccCccchhhhhhhhhccC
Q 016493          202 HIFNMDGAGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLLSGSTIQNKQMFNIICEL  278 (388)
Q Consensus       202 ~Iv~isS~~~~~~~~--~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~  278 (388)
                      +|+++||. .+..+.  ++...|++||+++++++++++.|+.++||+||+|+|| +++|++........ ...  ....+
T Consensus       143 ~iv~iss~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~-~~~--~~~~~  218 (273)
T PRK08278        143 HILTLSPP-LNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGD-EAM--RRSRT  218 (273)
T ss_pred             EEEEECCc-hhccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccccc-ccc--cccCC
Confidence            99999987 455555  7788999999999999999999999999999999999 68998654321111 000  11236


Q ss_pred             HHHHHHHHhhhhh
Q 016493          279 PETVARTLVPRIR  291 (388)
Q Consensus       279 pe~vA~~~l~~~~  291 (388)
                      |+++|+.++..+.
T Consensus       219 p~~va~~~~~l~~  231 (273)
T PRK08278        219 PEIMADAAYEILS  231 (273)
T ss_pred             HHHHHHHHHHHhc
Confidence            7777777765443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=8.7e-34  Score=262.32  Aligned_cols=214  Identities=23%  Similarity=0.340  Sum_probs=184.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+..+|.|+|||+-+|+|+.+|++|.++|++|++.+-+++..+++..+..                   .++..++++|+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-------------------s~rl~t~~LDV   85 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-------------------SPRLRTLQLDV   85 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-------------------CCcceeEeecc
Confidence            56788999999999999999999999999999999988887766655442                   36888899999


Q ss_pred             CCHHHHHHHHHHHHhhc--CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          129 CEPADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      +++++|+++.+.+.+..  .++-.||||||+....++.+-.+.+++++++++|++|++.+++.++|.++++  +|||||+
T Consensus        86 T~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnv  163 (322)
T KOG1610|consen   86 TKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNV  163 (322)
T ss_pred             CCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEe
Confidence            99999999999988765  3499999999987768899999999999999999999999999999999986  6999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. .+..+.|....|++||+|++.|+.+|++|+.+.||+|..|.||..+|++...  ....+.+.......|+++.+..
T Consensus       164 sS~-~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~~--~~~~~~~~~~w~~l~~e~k~~Y  240 (322)
T KOG1610|consen  164 SSV-LGRVALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLANP--EKLEKRMKEIWERLPQETKDEY  240 (322)
T ss_pred             ccc-ccCccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCCh--HHHHHHHHHHHhcCCHHHHHHH
Confidence            998 7899999999999999999999999999999999999999999999998762  2222333333444455554443

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.1e-34  Score=269.23  Aligned_cols=244  Identities=21%  Similarity=0.279  Sum_probs=191.8

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ....+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++                    +.++.+++
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~   62 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--------------------GENAWFIA   62 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--------------------CCceEEEE
Confidence            4567889999999999999999999999999999999999887665543321                    24578899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|+++.++++++++++.+++|++|++|||||...+ ..++.+.+.++|++.+++|+.+++++++++.|.|+++  .|+||
T Consensus        63 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii  140 (255)
T PRK05717         63 MDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIV  140 (255)
T ss_pred             ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEE
Confidence            99999999999999999999999999999998642 2567788999999999999999999999999999865  47999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.+....|++||+|+++++++++.|+.+ +|+||+|+||.++|++......   ...      .......
T Consensus       141 ~~sS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~---~~~------~~~~~~~  209 (255)
T PRK05717        141 NLAST-RARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRA---EPL------SEADHAQ  209 (255)
T ss_pred             EEcch-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccc---hHH------HHHHhhc
Confidence            99987 56777788899999999999999999999987 4999999999999987432210   000      0001112


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+..++..+++++..+.|++++...+.++..+..+|++
T Consensus       210 ~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        210 HPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence            23345556666666666777665544445444444443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-34  Score=267.25  Aligned_cols=243  Identities=24%  Similarity=0.298  Sum_probs=193.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      |++++|+++||||++|||+++|+.|+++|++|++..+ +.++.+++..++                    +.++.++++|
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~D   60 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL--------------------GDRAIALQAD   60 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh--------------------CCceEEEEcC
Confidence            4678899999999999999999999999999998765 444443332221                    2468889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCC-ccEEEEccccCCC-----CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          128 VCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~-iD~li~nAG~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      ++|+++++++++++.+.+++ +|++|||||....     ..++.+.+.+++++++++|+.+++.++++++|.|.++ +.|
T Consensus        61 ~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g  139 (253)
T PRK08642         61 VTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-GFG  139 (253)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-CCe
Confidence            99999999999999998888 9999999997421     2457788999999999999999999999999999876 468


Q ss_pred             EEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          202 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       202 ~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                      +|+++||. ....+.++...|++||+|++++++++++|+.++||+||+|+||+++|+.......   .....      ..
T Consensus       140 ~iv~iss~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~------~~  209 (253)
T PRK08642        140 RIINIGTN-LFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP---DEVFD------LI  209 (253)
T ss_pred             EEEEECCc-cccCCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC---HHHHH------HH
Confidence            99999987 4555666778999999999999999999999999999999999999985432111   00000      00


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ....++.++..|++++..+.||+++...+.+|..+..||++
T Consensus       210 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        210 AATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            11223456677888888888999888777888888777765

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=269.60  Aligned_cols=246  Identities=22%  Similarity=0.319  Sum_probs=194.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||.++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++.+|
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   66 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-----------------AGPEGLGVSAD   66 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCceEEEECC
Confidence            3578899999999999999999999999999999999998887766665543                 22457889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.++++++++++|.|+++  +|+|+++|
T Consensus        67 v~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~is  143 (264)
T PRK07576         67 VRDYAAVEAAFAQIADEFGPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQIS  143 (264)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEEC
Confidence            99999999999999999999999999999765 4677888999999999999999999999999999765  48999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-ccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      |. ++..+.++...|+++|+++++|+++++.|+.++||+|++|+||.++ |+........  .....      ......+
T Consensus       144 s~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~--~~~~~------~~~~~~~  214 (264)
T PRK07576        144 AP-QAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPS--PELQA------AVAQSVP  214 (264)
T ss_pred             Ch-hhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccC--HHHHH------HHHhcCC
Confidence            87 5667788889999999999999999999999999999999999997 5533221100  00000      0000012


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +.+...+++++..+.|++++...+.++..+..+|++
T Consensus       215 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        215 LKRNGTKQDIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             CCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence            334445666666667777765555566666666655

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2e-34  Score=266.27  Aligned_cols=231  Identities=16%  Similarity=0.180  Sum_probs=183.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||+++|++|+++|++|++++|++++..   +++.+                   ..+.++.+|++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~-------------------~~~~~~~~D~~~~~   59 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ-------------------AGAQCIQADFSTNA   59 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH-------------------cCCEEEEcCCCCHH
Confidence            589999999999999999999999999999999876432   22222                   12567899999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEEEEecCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGS  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~Iv~isS~~~  211 (388)
                      +++++++++.+.++++|++|||||... .....+.+.++|++++++|+.+++.+++.++|.|++++ +.++||++||. .
T Consensus        60 ~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~-~  137 (236)
T PRK06483         60 GIMAFIDELKQHTDGLRAIIHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDY-V  137 (236)
T ss_pred             HHHHHHHHHHhhCCCccEEEECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcch-h
Confidence            999999999999999999999999865 34456778999999999999999999999999998763 25799999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      +..+.++...|++||+++++|+++++.|+++ +||||+|+||++.|+....      ....      .+..++.++++..
T Consensus       138 ~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~------~~~~------~~~~~~~~~~~~~  204 (236)
T PRK06483        138 VEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDD------AAYR------QKALAKSLLKIEP  204 (236)
T ss_pred             hccCCCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCC------HHHH------HHHhccCccccCC
Confidence            6677788899999999999999999999988 5999999999998763210      0000      1112233456666


Q ss_pred             hccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          292 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       292 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .|++++..+.||++.  .+.++..+..||++
T Consensus       205 ~~~~va~~~~~l~~~--~~~~G~~i~vdgg~  233 (236)
T PRK06483        205 GEEEIIDLVDYLLTS--CYVTGRSLPVDGGR  233 (236)
T ss_pred             CHHHHHHHHHHHhcC--CCcCCcEEEeCccc
Confidence            777888888888762  34556666555553

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=261.76  Aligned_cols=214  Identities=22%  Similarity=0.292  Sum_probs=182.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||.++|++|+++|++|++++|+.+++++..+++..                 . .++.++++|++|++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~-~~~~~~~~Dl~~~~   63 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK-----------------A-ARVSVYAADVRDAD   63 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc-----------------C-CeeEEEEcCCCCHH
Confidence            47999999999999999999999999999999998887665544321                 1 26889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.++++++|++|||||.........+.+.++++.++++|+.+++.+++.++|.|+++ +.++||++||. ++
T Consensus        64 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~-~~  141 (257)
T PRK07024         64 ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASV-AG  141 (257)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEech-hh
Confidence            99999999999999999999999986522223337889999999999999999999999999887 46899999998 67


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      ..+.+....|++||++++.|+++++.|+.++||+|++|+||+++|++.......      .....+|+++|+.++..+..
T Consensus       142 ~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        142 VRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYP------MPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCC------CCCccCHHHHHHHHHHHHhC
Confidence            788888999999999999999999999999999999999999999976432110      01124799999999987764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-34  Score=265.34  Aligned_cols=248  Identities=23%  Similarity=0.274  Sum_probs=198.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||.++|++|+++|++|++++|+.+++++..+++.+...               ..++.++.+|++|.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~   66 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG---------------EGMAYGFGADATSEQ   66 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC---------------CceeEEEEccCCCHH
Confidence            68999999999999999999999999999999998888777666654211               146889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+.++++|++|||||... ..++.+.+.++|++++++|+.++++++++++|.|++++..++||++||. ++
T Consensus        67 ~i~~~~~~~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~-~~  144 (259)
T PRK12384         67 SVLALSRGVDEIFGRVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK-SG  144 (259)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc-cc
Confidence            999999999999999999999999876 5778889999999999999999999999999999876336899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cccccccCccchhhhhhhhhccCHHHHHH-----HH
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVAR-----TL  286 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~vA~-----~~  286 (388)
                      ..+.+....|++||+|+++++++++.|++++||+||+|+||.+ .|++......    .........+++..+     .+
T Consensus       145 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  220 (259)
T PRK12384        145 KVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLP----QYAKKLGIKPDEVEQYYIDKVP  220 (259)
T ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhH----HHHHhcCCChHHHHHHHHHhCc
Confidence            6677788899999999999999999999999999999999975 6776542111    111111112333332     23


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      +++...++|++..+.|++++...+.++..+..+++
T Consensus       221 ~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        221 LKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             ccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            45566788888888888887655555555555443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=6.1e-34  Score=266.50  Aligned_cols=191  Identities=22%  Similarity=0.303  Sum_probs=164.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           55 NVVITGSTRGLGKALAREFLL----SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++||||++|||+++|++|++    +|++|++++|++++++++.++++...               .+.++.++++|++|
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~v~~~~~Dl~~   66 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER---------------SGLRVVRVSLDLGA   66 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC---------------CCceEEEEEeccCC
Confidence            689999999999999999997    79999999999999888877775421               13468899999999


Q ss_pred             HHHHHHHHHHHHhhcCCc----cEEEEccccCCCCC-CcCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEE
Q 016493          131 PADVQKLSNFAVNEFGSI----DIWINNAGTNKGFK-PLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHI  203 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~i----D~li~nAG~~~~~~-~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~I  203 (388)
                      +++++++++++.+.++++    |+||||||...... ...+ .+.+++++++++|+.+++.+++.++|.|++++ ..++|
T Consensus        67 ~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~i  146 (256)
T TIGR01500        67 EAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTV  146 (256)
T ss_pred             HHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEE
Confidence            999999999998887653    69999999854222 2333 35789999999999999999999999998752 35799


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      |++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus       147 v~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~  203 (256)
T TIGR01500       147 VNISSL-CAIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQ  203 (256)
T ss_pred             EEECCH-HhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHH
Confidence            999998 677888899999999999999999999999999999999999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=266.25  Aligned_cols=185  Identities=24%  Similarity=0.312  Sum_probs=166.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|+++||||++|||+++|++|+++|++|++++|++++++++.    +                   ..+.++.+|++|.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~-------------------~~~~~~~~Dl~d~   59 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----A-------------------EGLEAFQLDYAEP   59 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----H-------------------CCceEEEccCCCH
Confidence            3689999999999999999999999999999999987765432    1                   2367789999999


Q ss_pred             HHHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          132 ADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       132 ~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      ++++++++++.+.+ +++|++|||||... .+++.+.+.++++.++++|+.|++.+++.++|.|+++ +.|+||++||. 
T Consensus        60 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~-  136 (277)
T PRK05993         60 ESIAALVAQVLELSGGRLDALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSI-  136 (277)
T ss_pred             HHHHHHHHHHHHHcCCCccEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECCh-
Confidence            99999999987766 68999999999877 5778889999999999999999999999999999987 46899999997 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      .+..+.++...|++||+++++|+++|+.|+.++||+|++|+||+++|++...
T Consensus       137 ~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        137 LGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             hhcCCCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            6778888899999999999999999999999999999999999999998653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.7e-34  Score=265.79  Aligned_cols=241  Identities=21%  Similarity=0.267  Sum_probs=191.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++|+++||||++|||+++|++|+++|++|++. +|+.++.++..+++.+                 .+.++.++.+|++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   63 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA-----------------LGFDFIASEGNVG   63 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            468999999999999999999999999998885 4555555555555433                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|+++ +.++||++||.
T Consensus        64 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  141 (246)
T PRK12938         64 DWDSTKAAFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSV  141 (246)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEech
Confidence            999999999999999999999999999865 4678888999999999999999999999999999876 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       .+..+.++...|+++|++++++++++++|+.+.||++|+|+||+++||+..........          ......+..+
T Consensus       142 -~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~----------~~~~~~~~~~  210 (246)
T PRK12938        142 -NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE----------KIVATIPVRR  210 (246)
T ss_pred             -hccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHH----------HHHhcCCccC
Confidence             56777888899999999999999999999999999999999999999986432110000          0001112334


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      ...+++++..+.||+++...+.++..+..+|+
T Consensus       211 ~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        211 LGSPDEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            55666677777777776654555555544444

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=4.8e-34  Score=266.13  Aligned_cols=249  Identities=24%  Similarity=0.352  Sum_probs=199.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+                 .+.++.++.+|++|+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~~   63 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ-----------------AGGKAVAYKLDVSDKDQ   63 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCCCHHH
Confidence            6899999999999999999999999999999998888777766654                 24578899999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+++.|++++.+++||++||. .+.
T Consensus        64 i~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~  141 (254)
T TIGR02415        64 VFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASI-AGH  141 (254)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecch-hhc
Confidence            99999999999999999999999866 5788899999999999999999999999999999987556899999987 667


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH-HHHHHHhhhhhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE-TVARTLVPRIRV  292 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe-~vA~~~l~~~~~  292 (388)
                      .+.+....|+++|+++++|++.++.|+.+.||+|++|+||+++|++....................+ .....++++...
T Consensus       142 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
T TIGR02415       142 EGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSE  221 (254)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCC
Confidence            7788899999999999999999999999999999999999999998643221111100000000001 111223455667


Q ss_pred             ccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          293 VKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      |++++..+.||+++.....++..+..||+
T Consensus       222 ~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       222 PEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHHHHHhhcccccCCccCcEEEecCC
Confidence            78888888888887665555555555554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.2e-34  Score=294.77  Aligned_cols=192  Identities=33%  Similarity=0.486  Sum_probs=172.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ..++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   61 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--------------------GPDHHALAMDVS   61 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEeccC
Confidence            457899999999999999999999999999999999988877655443                    245778999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      |+++++++++++.++++++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|.|++++.+++||++||
T Consensus        62 ~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS  141 (520)
T PRK06484         62 DEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS  141 (520)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            9999999999999999999999999998432 356778999999999999999999999999999987644459999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      . ++..+.++...|+++|+|+.+|+++|+.|+.+.||+||+|+||+|+|++...
T Consensus       142 ~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  194 (520)
T PRK06484        142 G-AGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAE  194 (520)
T ss_pred             c-ccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhh
Confidence            7 6778888999999999999999999999999999999999999999998653

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-34  Score=266.80  Aligned_cols=193  Identities=25%  Similarity=0.412  Sum_probs=173.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++++++.++++.                 .+.++.++.+|+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   68 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA-----------------AGRRAHVVAADL   68 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccC
Confidence            357899999999999999999999999999999999998888777666643                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++++.|.|.+..+.++||++||
T Consensus        69 ~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS  147 (263)
T PRK07814         69 AHPEATAGLAGQAVEAFGRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS  147 (263)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence            9999999999999999999999999999865 467788899999999999999999999999999987546789999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . ++..+.++...|++||+++++++++++.|+.+ +|+||+|+||++.|++..
T Consensus       148 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~  198 (263)
T PRK07814        148 T-MGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALE  198 (263)
T ss_pred             c-cccCCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhh
Confidence            7 66778888999999999999999999999987 699999999999999754

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=270.57  Aligned_cols=227  Identities=20%  Similarity=0.206  Sum_probs=181.4

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..               .+.++.++.+
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~   74 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT---------------PGADVTLQEL   74 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---------------CCCceEEEEC
Confidence            3467899999999999999999999999999999999999988887777665421               1246888999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++++++.+.++++|+||||||+..   +..+.+.++++..+++|+.+++.+++.++|.|++. +.++||++
T Consensus        75 Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~v  150 (306)
T PRK06197         75 DLTSLASVRAAADALRAAYPRIDLLINNAGVMY---TPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTV  150 (306)
T ss_pred             CCCCHHHHHHHHHHHHhhCCCCCEEEECCcccc---CCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEE
Confidence            999999999999999999999999999999854   22456778899999999999999999999999977 46899999


Q ss_pred             cCCCCCC------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEE--ecCcccccccccCccchhh---
Q 016493          207 DGAGSGG------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTA--SPGMVLTDLLLSGSTIQNK---  269 (388)
Q Consensus       207 sS~~~~~------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v--~PG~v~T~~~~~~~~~~~~---  269 (388)
                      ||.++..            .+.++...|++||++++.|++++++++++.|++|+++  +||+|+|++.+........   
T Consensus       151 SS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~  230 (306)
T PRK06197        151 SSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVAT  230 (306)
T ss_pred             CCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHH
Confidence            9873221            1234567899999999999999999999888877665  6999999987643221111   


Q ss_pred             hhhhhhccCHHHHHHHHhhhhhh
Q 016493          270 QMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       270 ~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      .....+..+|++.+...+.....
T Consensus       231 ~~~~~~~~~~~~g~~~~~~~~~~  253 (306)
T PRK06197        231 VLAPLLAQSPEMGALPTLRAATD  253 (306)
T ss_pred             HHHhhhcCCHHHHHHHHHHHhcC
Confidence            11122345678777777765543

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-33  Score=260.49  Aligned_cols=217  Identities=24%  Similarity=0.262  Sum_probs=180.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+|+++||||++|||+++|++|+++| ++|++++|++++ ++++.+++++.                ...+++++++|++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~----------------~~~~v~~~~~D~~   70 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA----------------GASSVEVIDFDAL   70 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc----------------CCCceEEEEecCC
Confidence            57899999999999999999999995 999999999886 77777776542                1236889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+ ++++|++|||+|...+ ..-...+.++.++++++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus        71 ~~~~~~~~~~~~~~-~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~  147 (253)
T PRK07904         71 DTDSHPKVIDAAFA-GGDVDVAIVAFGLLGD-AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSV  147 (253)
T ss_pred             ChHHHHHHHHHHHh-cCCCCEEEEeeecCCc-hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEech
Confidence            99999999998876 5899999999998542 111222455666889999999999999999999987 46999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       .+..+.++...|++||+++.+|+++|+.|+.++||+|++|+||+++|++.......       ....+|+++|+.+++.
T Consensus       148 -~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~A~~i~~~  219 (253)
T PRK07904        148 -AGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA-------PLTVDKEDVAKLAVTA  219 (253)
T ss_pred             -hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC-------CCCCCHHHHHHHHHHH
Confidence             55567777889999999999999999999999999999999999999987543211       1235899999999988


Q ss_pred             hhhccc
Q 016493          290 IRVVKG  295 (388)
Q Consensus       290 ~~~~~~  295 (388)
                      +...+.
T Consensus       220 ~~~~~~  225 (253)
T PRK07904        220 VAKGKE  225 (253)
T ss_pred             HHcCCC
Confidence            865443

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-34  Score=265.26  Aligned_cols=242  Identities=19%  Similarity=0.218  Sum_probs=190.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||+++|++|+++|++|++++|++++. +..+++.+                 .+.++.++.+|+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~-----------------~~~~~~~~~~D~   64 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA-----------------LQPRAEFVQVDL   64 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh-----------------cCCceEEEEccC
Confidence            578999999999999999999999999999999999998776 55555543                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++++.+.++++|++|||||... ...+.+.+ +++++.+++|+.+++.+++.++|.|+++  .++|+++||
T Consensus        65 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss  140 (258)
T PRK08628         65 TDDAQCRDAVEQTVAKFGRIDGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISS  140 (258)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECC
Confidence            9999999999999999999999999999755 34444444 9999999999999999999999999865  489999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH----
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR----  284 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~----  284 (388)
                      . .+..+.++...|++||+++++++++++.|+.++||+||+|+||.++|++.........         .++....    
T Consensus       141 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~  210 (258)
T PRK08628        141 K-TALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFD---------DPEAKLAAITA  210 (258)
T ss_pred             H-HhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhcc---------CHHHHHHHHHh
Confidence            7 5667778889999999999999999999999999999999999999997532110000         1111111    


Q ss_pred             -HHh-hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 -TLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 -~~l-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                       .+. +++..+++++..+.|++++.....++..+..+|++
T Consensus       211 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        211 KIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             cCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence             111 23455666777777777776555555555555544

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=258.94  Aligned_cols=219  Identities=25%  Similarity=0.353  Sum_probs=189.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||++++++|+++|++|++++|+.+++++..+++..                 .+.++.++++|++|+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~~~   63 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE-----------------AGGDGFYQRCDVRDYSQ   63 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEccCCCHHH
Confidence            5799999999999999999999999999999999988887777754                 23568889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++.+.+.++++|++|||||... .+++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. .+.
T Consensus        64 ~~~~~~~i~~~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~-~~~  140 (270)
T PRK05650         64 LTALAQACEEKWGGIDVIVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASM-AGL  140 (270)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECCh-hhc
Confidence            99999999999999999999999876 5778889999999999999999999999999999887 46899999988 677


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchh---hhh---hhhhccCHHHHHHHHh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN---KQM---FNIICELPETVARTLV  287 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~---~~~~~~~pe~vA~~~l  287 (388)
                      .+.++...|+++|+++++++++++.|+.+.||+|++|+||+++|++.........   ...   ......+++++|+.++
T Consensus       141 ~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~  220 (270)
T PRK05650        141 MQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIY  220 (270)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHH
Confidence            7888999999999999999999999999999999999999999998754321111   111   1112357999999999


Q ss_pred             hhhhh
Q 016493          288 PRIRV  292 (388)
Q Consensus       288 ~~~~~  292 (388)
                      +.+..
T Consensus       221 ~~l~~  225 (270)
T PRK05650        221 QQVAK  225 (270)
T ss_pred             HHHhC
Confidence            88764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.8e-34  Score=265.25  Aligned_cols=193  Identities=20%  Similarity=0.313  Sum_probs=167.4

Q ss_pred             cCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHHHHHHHHHHHhhhhhhcCCCCccc
Q 016493           49 CKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSS-----------ESVRMTVTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        49 ~~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~-----------~~l~~~~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      +++++|+++||||++  |||.++|++|+++|++|++++|++           .....+.+++..                
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------------   64 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES----------------   64 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh----------------
Confidence            467889999999994  999999999999999999999972           111112222221                


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  195 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  195 (388)
                       .+.+++++++|+++.++++++++++.+.++++|++|||||+.. ..++.+.+.+++++.+++|+.+++.++++++|.|.
T Consensus        65 -~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  142 (256)
T PRK12748         65 -YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD  142 (256)
T ss_pred             -cCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence             2356899999999999999999999999999999999999866 57788889999999999999999999999999997


Q ss_pred             cCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          196 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       196 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      ++ ..++||++||. .+..+.++...|++||+++++++++++.|+.+.||+|++|+||+++|++..
T Consensus       143 ~~-~~~~iv~~ss~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~  206 (256)
T PRK12748        143 GK-AGGRIINLTSG-QSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT  206 (256)
T ss_pred             hc-CCeEEEEECCc-cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence            76 46899999987 566777888999999999999999999999999999999999999999753

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=9.3e-34  Score=262.01  Aligned_cols=235  Identities=20%  Similarity=0.285  Sum_probs=191.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      ++||||++|||+++|++|+++|++|++++|+ .+++++..+++++                 .+.++.++++|++|.+++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~~~   63 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-----------------QGGNARLLQFDVADRVAC   63 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCeEEEEEccCCCHHHH
Confidence            5899999999999999999999999998865 4556655555543                 235688999999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHH-HHHHcCCCCcEEEEecCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-p~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +++++++.+.++++|++|||+|... ..++.+.+.++++.++++|+.+++++++.++ |.++++ +.++||++||. ++.
T Consensus        64 ~~~~~~~~~~~~~i~~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~-~~~  140 (239)
T TIGR01831        64 RTLLEADIAEHGAYYGVVLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASV-SGV  140 (239)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcch-hhc
Confidence            9999999999999999999999866 4667788999999999999999999999876 545544 46899999987 577


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhc
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~  293 (388)
                      .+.++...|+++|+++.+++++++.|+.++||+||+|+||+++|++..+.....           .+..+..++.+...+
T Consensus       141 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~~~~~~~~  209 (239)
T TIGR01831       141 MGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDL-----------DEALKTVPMNRMGQP  209 (239)
T ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHH-----------HHHHhcCCCCCCCCH
Confidence            788889999999999999999999999999999999999999999865321100           111223345667788


Q ss_pred             cccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          294 KGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       294 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      ++++..+.||+++...+.++..+..||+
T Consensus       210 ~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       210 AEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            8888888899988876666665555554

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-32  Score=259.73  Aligned_cols=194  Identities=27%  Similarity=0.399  Sum_probs=173.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..                 .+.++.++++|++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   65 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA-----------------QGAEVLGVRTDVS   65 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            45789999999999999999999999999999999998888777666643                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC-----cEEE
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIF  204 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~-----g~Iv  204 (388)
                      |.++++++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.++++++++++|.|.++...     |+||
T Consensus        66 d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv  144 (287)
T PRK06194         66 DAAQVEALADAALERFGAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIV  144 (287)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Confidence            999999999999999999999999999976 5777888999999999999999999999999999877443     7999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCccccccccc
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ++||. ++..+.++...|++||+++++|+++++.|+.  ..+|++++++||+|+|++...
T Consensus       145 ~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        145 NTASM-AGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             EeCCh-hhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence            99997 6677778889999999999999999999987  457999999999999998754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-33  Score=261.61  Aligned_cols=192  Identities=24%  Similarity=0.390  Sum_probs=172.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.+|+++||||++|||+++|++|+++|++|++ .+|+.++.+++.++++.                 .+.++.++.+|++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA-----------------LGRKALAVKANVG   64 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCC
Confidence            46799999999999999999999999999876 58888887777666654                 2457889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|++|||||... ..++.+.+.++++..+++|+.+++.++++++|.|+++ +.|+||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~  142 (250)
T PRK08063         65 DVEKIKEMFAQIDEEFGRLDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-GGGKIISLSSL  142 (250)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcch
Confidence            999999999999999999999999999876 5788889999999999999999999999999999877 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       ....+.++...|++||+++++|+++++.|+.+.||++|+|+||+++|++...
T Consensus       143 -~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        143 -GSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             -hhccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence             5566777888999999999999999999999999999999999999998643

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=261.82  Aligned_cols=241  Identities=24%  Similarity=0.316  Sum_probs=190.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   62 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--------------------GESALVIRADAG   62 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--------------------CCceEEEEecCC
Confidence            467899999999999999999999999999999999987665544332                    246788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.+++.++++.+.+.++++|++|||||... ..++.+.+.+++++++++|+.++++++++++|+|++   .+++|+++|.
T Consensus        63 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~  138 (249)
T PRK06500         63 DVAAQKALAQALAEAFGRLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSI  138 (249)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEech
Confidence            999999999999999999999999999876 567788899999999999999999999999999964   3678888876


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc--hhhhhhhhhccCHHHHHHHHh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~pe~vA~~~l  287 (388)
                       ++..+.+....|+++|+++++++++++.|+.++||+|++|+||+++||+.......  .......      ......++
T Consensus       139 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~------~~~~~~~~  211 (249)
T PRK06500        139 -NAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAA------QIQALVPL  211 (249)
T ss_pred             -HhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHH------HHHhcCCC
Confidence             56677788899999999999999999999999999999999999999976432100  0000000      00011123


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      .+...+++++..+.|++++...+.++..+..||+
T Consensus       212 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        212 GRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            3445566666666777776655666666655554

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=264.56  Aligned_cols=243  Identities=22%  Similarity=0.308  Sum_probs=181.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++++.    +.+++..+++..                 .+.++.+++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~   67 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA-----------------AGAKAVAFQ   67 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHH-----------------hCCcEEEEe
Confidence            46789999999999999999999999999977766543    334444444432                 234688899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|+++   +++++
T Consensus        68 ~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~iv~  143 (257)
T PRK12744         68 ADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN---GKIVT  143 (257)
T ss_pred             cCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC---CCEEE
Confidence            9999999999999999999999999999999876 4678888999999999999999999999999999743   56776


Q ss_pred             e-cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          206 M-DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       206 i-sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      + ||.  ...+.+.+..|++||+|+++|+++++.|+.+.||+||+|+||++.|++..............    ..  ...
T Consensus       144 ~~ss~--~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~----~~--~~~  215 (257)
T PRK12744        144 LVTSL--LGAFTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHK----TA--AAL  215 (257)
T ss_pred             Eecch--hcccCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhccc----cc--ccc
Confidence            6 443  22345778899999999999999999999999999999999999999764321111000000    00  000


Q ss_pred             HHh--hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLV--PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+  .++..++|++..+.|++++ ..+.++..+..+|++
T Consensus       216 ~~~~~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg~  254 (257)
T PRK12744        216 SPFSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGGY  254 (257)
T ss_pred             cccccCCCCCHHHHHHHHHHhhcc-cceeecceEeecCCc
Confidence            111  1455666777777777764 334455555555543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-32  Score=259.28  Aligned_cols=183  Identities=27%  Similarity=0.378  Sum_probs=166.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..    +                   ..+.++++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~-------------------~~~~~~~~Dv~~~   58 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S-------------------LGVHPLSLDVTDE   58 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h-------------------CCCeEEEeeCCCH
Confidence            5799999999999999999999999999999999987664321    1                   2367899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++.+.++++|++|||||... .+++.+.+.++++..+++|+.+++.+++.++|.|+++ +.|+||++||. +
T Consensus        59 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~-~  135 (273)
T PRK06182         59 ASIKAAVDTIIAEEGRIDVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSM-G  135 (273)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcch-h
Confidence            9999999999999999999999999976 6788899999999999999999999999999999887 46899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      +..+.+....|++||+++++|+++++.|+.+.||+|++|+||+++|++.
T Consensus       136 ~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        136 GKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             hcCCCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence            6667777889999999999999999999999999999999999999975

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.6e-32  Score=265.49  Aligned_cols=196  Identities=17%  Similarity=0.166  Sum_probs=164.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +..+|+++||||++|||+++|++|+++|++|++++|+.++++++.+++..                 .+.++.++++|++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~   65 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-----------------PPDSYTIIHIDLG   65 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----------------cCCceEEEEecCC
Confidence            45789999999999999999999999999999999999888777666532                 2346888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS  208 (388)
                      |.++++++++++.+.++++|+||||||+..+..+..+.+.++++.++++|+.|++++++.++|.|++++. .++||++||
T Consensus        66 ~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS  145 (322)
T PRK07453         66 DLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGT  145 (322)
T ss_pred             CHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcc
Confidence            9999999999988887899999999998542233456789999999999999999999999999998743 369999998


Q ss_pred             CCCCC----------------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecC
Q 016493          209 AGSGG----------------------------------SSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPG  253 (388)
Q Consensus       209 ~~~~~----------------------------------~~~~~~~~Y~aSK~al~~l~~~la~el~-~~gI~vn~v~PG  253 (388)
                      ..+..                                  .+..+...|+.||.+...+++.+++++. ..||+|++++||
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG  225 (322)
T PRK07453        146 VTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPG  225 (322)
T ss_pred             cccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCC
Confidence            63211                                  0112346899999999999999999995 469999999999


Q ss_pred             cc-ccccccc
Q 016493          254 MV-LTDLLLS  262 (388)
Q Consensus       254 ~v-~T~~~~~  262 (388)
                      .| .|++.++
T Consensus       226 ~v~~t~~~~~  235 (322)
T PRK07453        226 CVADTPLFRN  235 (322)
T ss_pred             cccCCccccc
Confidence            99 5887654

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=257.43  Aligned_cols=221  Identities=24%  Similarity=0.367  Sum_probs=185.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++...                ....+.++.+|++|+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~~~   64 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL----------------GGTVPEHRALDISDYDA   64 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------CCCcceEEEeeCCCHHH
Confidence            57999999999999999999999999999999998887777766542                11235567999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.+.++++|++|||||... ..++.+.+.++++..+++|+.+++.++++++|.|.+++..++||++||. .+.
T Consensus        65 ~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~-~~~  142 (272)
T PRK07832         65 VAAFAADIHAAHGSMDVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA-AGL  142 (272)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccc-ccc
Confidence            99999999999999999999999875 5778899999999999999999999999999999876456899999987 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc----hhh---hhhh---hhccCHHHHH
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI----QNK---QMFN---IICELPETVA  283 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~---~~~~---~~~~~pe~vA  283 (388)
                      .+.+....|++||+++.+|+++++.|+.++||+|++|+||.++|++..+....    ...   ....   ....+|+++|
T Consensus       143 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA  222 (272)
T PRK07832        143 VALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAA  222 (272)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHH
Confidence            77888899999999999999999999999999999999999999986542100    000   0111   1125899999


Q ss_pred             HHHhhhhhh
Q 016493          284 RTLVPRIRV  292 (388)
Q Consensus       284 ~~~l~~~~~  292 (388)
                      +.++..+..
T Consensus       223 ~~~~~~~~~  231 (272)
T PRK07832        223 EKILAGVEK  231 (272)
T ss_pred             HHHHHHHhc
Confidence            999887753

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-32  Score=253.71  Aligned_cols=221  Identities=25%  Similarity=0.362  Sum_probs=187.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||.+++++|+++|++|++++|+++++++..+++ +                 .+.++.++.+|+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-----------------~~~~~~~~~~D~   62 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-----------------YPGRHRWVVADL   62 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-----------------cCCceEEEEccC
Confidence            4568899999999999999999999999999999999988887766555 1                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++.+.+ ++++|++|||||... ..++.+.+.+++++++++|+.|++.+++.++|+|.++ +.++||++||
T Consensus        63 ~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS  139 (263)
T PRK09072         63 TSEAGREAVLARARE-MGGINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGS  139 (263)
T ss_pred             CCHHHHHHHHHHHHh-cCCCCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecC
Confidence            999999999998876 789999999999876 5778889999999999999999999999999999877 4689999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.++...|+++|+++.+++++++.|+.+.||+|++|+||+++|++............ .....+|+++|+.++.
T Consensus       140 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~va~~i~~  217 (263)
T PRK09072        140 T-FGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRAL-GNAMDDPEDVAAAVLQ  217 (263)
T ss_pred             h-hhCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccccccc-cCCCCCHHHHHHHHHH
Confidence            7 5667788889999999999999999999999999999999999999997643221111111 1123479999999988


Q ss_pred             hhhh
Q 016493          289 RIRV  292 (388)
Q Consensus       289 ~~~~  292 (388)
                      .+..
T Consensus       218 ~~~~  221 (263)
T PRK09072        218 AIEK  221 (263)
T ss_pred             HHhC
Confidence            7764

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-33  Score=258.08  Aligned_cols=191  Identities=29%  Similarity=0.468  Sum_probs=168.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      |++++|+++||||++|||+++|++|+++|++|+++.|+.+ ..++..+++..                 .+.++.++.+|
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-----------------AGGRAIAVQAD   63 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-----------------cCCeEEEEECC
Confidence            4678999999999999999999999999999988877543 44545454433                 24578999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|++   .++||++|
T Consensus        64 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~s  139 (245)
T PRK12937         64 VADAAAVTRLFDAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLS  139 (245)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEe
Confidence            99999999999999999999999999999865 567788899999999999999999999999999964   47999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      |. +...+.++...|+++|++++.++++++.|+.+.||++++|+||+++|++..
T Consensus       140 s~-~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~  192 (245)
T PRK12937        140 TS-VIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF  192 (245)
T ss_pred             ec-cccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence            87 566778888999999999999999999999999999999999999999853

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-33  Score=258.66  Aligned_cols=232  Identities=19%  Similarity=0.314  Sum_probs=184.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++| ++++++++.++                      ..+.++.+|+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~----------------------~~~~~~~~D~   60 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE----------------------TGATAVQTDS   60 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH----------------------hCCeEEecCC
Confidence            467899999999999999999999999999998876 44444433221                      1245678999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++.++++    .++++|++|||||... ..+..+.++++|++++++|+.+++.+++.++|.|++   .++||++||
T Consensus        61 ~~~~~~~~~~~----~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS  132 (237)
T PRK12742         61 ADRDAVIDVVR----KSGALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGS  132 (237)
T ss_pred             CCHHHHHHHHH----HhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEec
Confidence            99998877665    3578999999999865 466778899999999999999999999999999963   479999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      ..+...+.++...|+++|+++++++++++.|+.++||+||+|+||+++|++...... ....          .-...+++
T Consensus       133 ~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~----------~~~~~~~~  201 (237)
T PRK12742        133 VNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-MKDM----------MHSFMAIK  201 (237)
T ss_pred             cccccCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-HHHH----------HHhcCCCC
Confidence            743345778889999999999999999999999999999999999999998542110 0000          00112345


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +...|++++..+.||+++...+.++..+..||++
T Consensus       202 ~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        202 RHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAF  235 (237)
T ss_pred             CCCCHHHHHHHHHHHcCcccCcccCCEEEeCCCc
Confidence            5667788888888999888878888888777775

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2.5e-33  Score=260.97  Aligned_cols=243  Identities=21%  Similarity=0.277  Sum_probs=192.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||++++++|+++|++|++++|+.         +..                 .+.++..+++|+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-----------------~~~~~~~~~~D~   57 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-----------------EDYPFATFVLDV   57 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-----------------cCCceEEEEecC
Confidence            568899999999999999999999999999999999986         111                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++||
T Consensus        58 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss  135 (252)
T PRK08220         58 SDAAAVAQVCQRLLAETGPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGS  135 (252)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECC
Confidence            9999999999999999999999999999876 5778888999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH-HHHHh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLV  287 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v-A~~~l  287 (388)
                      . .+..+.++...|++||+++++++++++.|+.+.||+||+|+||+++|++........... ........+.. ...+.
T Consensus       136 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  213 (252)
T PRK08220        136 N-AAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGE-QQVIAGFPEQFKLGIPL  213 (252)
T ss_pred             c-hhccCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhh-hhhhhhHHHHHhhcCCC
Confidence            7 566777888999999999999999999999999999999999999999754321110000 00000001111 11223


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      .++..+++++..+.||+++...+.++.....||+
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        214 GKIARPQEIANAVLFLASDLASHITLQDIVVDGG  247 (252)
T ss_pred             cccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence            4566677777777788877765556555555554

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=8.8e-33  Score=257.92  Aligned_cols=240  Identities=18%  Similarity=0.236  Sum_probs=185.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.....               ...+.++++|++|
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~---------------~~~~~~~~~Dl~d   66 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK---------------SKKLSLVELDITD   66 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcC---------------CCceeEEEecCCC
Confidence            5789999999999999999999999999999999999988887777654211               2346677999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCC--CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKG--FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++++.++++++.+.++++|++|||||....  ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS  145 (256)
T PRK09186         67 QESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISS  145 (256)
T ss_pred             HHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            999999999999999999999999986421  2467788999999999999999999999999999977 4679999998


Q ss_pred             CCCCCCCC----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccC
Q 016493          209 AGSGGSST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  278 (388)
Q Consensus       209 ~~~~~~~~----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  278 (388)
                      . ++..+.          .....|++||+++++++++++.|+.+.||+||.|+||.+.|+....    .....       
T Consensus       146 ~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~----~~~~~-------  213 (256)
T PRK09186        146 I-YGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA----FLNAY-------  213 (256)
T ss_pred             h-hhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH----HHHHH-------
Confidence            6 332211          1224699999999999999999999999999999999998764211    00000       


Q ss_pred             HHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          279 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       279 pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                         .......++..+++++..+.|++++...+.++..+..+++
T Consensus       214 ---~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        214 ---KKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             ---HhcCCccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence               0001122344566666666777776655555555555554

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-33  Score=264.47  Aligned_cols=243  Identities=22%  Similarity=0.266  Sum_probs=190.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++|+++||||++|||.++|++|+++|++|++++|+.++ +++..+.+..                 .+.++.++.+|
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D  104 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-----------------EGVKCLLIPGD  104 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-----------------cCCeEEEEEcc
Confidence            56789999999999999999999999999999999998643 4444333322                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++++.+.++++|++|||||...+..++.+.+.++|++.+++|+.+++.++++++|.|++   .++||++|
T Consensus       105 l~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~is  181 (290)
T PRK06701        105 VSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTG  181 (290)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEe
Confidence            999999999999999999999999999998653466788999999999999999999999999999964   37899999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.+....|++||+|+++++++++.++.++||+|++|+||+++|++.......  ...       .+......+
T Consensus       182 S~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~--~~~-------~~~~~~~~~  251 (290)
T PRK06701        182 SI-TGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDE--EKV-------SQFGSNTPM  251 (290)
T ss_pred             cc-cccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCH--HHH-------HHHHhcCCc
Confidence            87 66777788899999999999999999999999999999999999999976432110  000       001111223


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      .+...+++++..+.|++++...+.++..+..+|+
T Consensus       252 ~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        252 QRPGQPEELAPAYVFLASPDSSYITGQMLHVNGG  285 (290)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            3444556666666677766554445544444443

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-33  Score=253.52  Aligned_cols=214  Identities=17%  Similarity=0.248  Sum_probs=172.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||++|||+++|++|+++|++|++++|+.+++++..+++                      .+.++++|++|++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~~~~~~v   59 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----------------------DVDAIVCDNTDPASL   59 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------------cCcEEecCCCCHHHH
Confidence            4899999999999999999999999999999988776554332                      245688999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCC-----CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +++++++.+   ++|++|||||....     ..++.+ +.++|++++++|+.++++++|+++|.|++   +|+||++||.
T Consensus        60 ~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~  132 (223)
T PRK05884         60 EEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPE  132 (223)
T ss_pred             HHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecC
Confidence            999887653   69999999985321     012333 57899999999999999999999999974   4899999886


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                      .     .+....|++||+|+.+|+++++.|++++||+||+|+||+++|++.....        .    .|       .  
T Consensus       133 ~-----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~--------~----~p-------~--  186 (223)
T PRK05884        133 N-----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS--------R----TP-------P--  186 (223)
T ss_pred             C-----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc--------C----CC-------C--
Confidence            2     3456889999999999999999999999999999999999998643211        0    01       0  


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                       ..+++++..+.||+++...+.++..+..||++..
T Consensus       187 -~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        187 -PVAAEIARLALFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             -CCHHHHHHHHHHHcCchhhccCCcEEEeCCCeec
Confidence             1445556666788888888888888888888754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.8e-33  Score=258.59  Aligned_cols=194  Identities=31%  Similarity=0.494  Sum_probs=174.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||.+++++|+++|++|++++|+++++++..+++..                  +.++.++++|+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~D~   62 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA------------------GGRAIAVAADV   62 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------------------CCeEEEEECCC
Confidence            457899999999999999999999999999999999999887766555432                  24688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.++++++|++|||||......++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.+++|++||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  141 (251)
T PRK07231         63 SDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVAS  141 (251)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            999999999999999999999999999986545667788999999999999999999999999999876 5689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      . .+..+.++...|+.+|++++.+++.++.++++.||+|++++||+++|++...
T Consensus       142 ~-~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~  194 (251)
T PRK07231        142 T-AGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA  194 (251)
T ss_pred             h-hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence            7 6777888899999999999999999999999999999999999999998654

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-32  Score=250.85  Aligned_cols=220  Identities=25%  Similarity=0.354  Sum_probs=186.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||++|||++++++|+++|++|++++|++++.+++.+++.+                 .+.++.++.+|++|+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~   67 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS-----------------TGVKAAAYSIDLSNP   67 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------CCCcEEEEEccCCCH
Confidence            468999999999999999999999999999999999887776666543                 235688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++.++++.+.++++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. .
T Consensus        68 ~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~-~  144 (241)
T PRK07454         68 EAIAPGIAELLEQFGCPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSI-A  144 (241)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccH-H
Confidence            9999999999999999999999999876 4677888999999999999999999999999999877 46899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      +..+.++...|+++|++++.++++++.|+.+.||++++|+||+++|++.......  .........+|+++|+.++..+.
T Consensus       145 ~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~  222 (241)
T PRK07454        145 ARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ--ADFDRSAMLSPEQVAQTILHLAQ  222 (241)
T ss_pred             hCcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--cccccccCCCHHHHHHHHHHHHc
Confidence            6677888899999999999999999999999999999999999999986432111  11111123478899988877665


Q ss_pred             hc
Q 016493          292 VV  293 (388)
Q Consensus       292 ~~  293 (388)
                      .+
T Consensus       223 ~~  224 (241)
T PRK07454        223 LP  224 (241)
T ss_pred             CC
Confidence            43

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-32  Score=256.88  Aligned_cols=187  Identities=27%  Similarity=0.342  Sum_probs=168.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|+++||||+||||++++++|+++|++|++++|++++++++.+.                    .+.++.++.+|++|+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~--------------------~~~~~~~~~~D~~d~   62 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL--------------------HPDRALARLLDVTDF   62 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh--------------------cCCCeeEEEccCCCH
Confidence            578999999999999999999999999999999998776543221                    124678899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++.++++.+.+.++++|++|||||... .+++.+.+.+++++++++|+.++++++++++|.|+++ +.++||++||. +
T Consensus        63 ~~~~~~~~~~~~~~~~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~iSS~-~  139 (277)
T PRK06180         63 DAIDAVVADAEATFGPIDVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSM-G  139 (277)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCCEEEEEecc-c
Confidence            9999999999999999999999999876 5788899999999999999999999999999999987 46899999998 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      +..+.++...|+++|+++++++++++.|+.+.||+|++|+||.++|++..
T Consensus       140 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        140 GLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             ccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence            67788889999999999999999999999999999999999999998753

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-33  Score=257.61  Aligned_cols=193  Identities=23%  Similarity=0.372  Sum_probs=173.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||.++|++|+++|++|++++|+.++.++..+++.                  .+.++.++++|+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~D~   62 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA------------------AGGRAFARQGDV   62 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh------------------cCCeEEEEEcCC
Confidence            46789999999999999999999999999999999999887766555543                  135688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|++|||+|... ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++|+++||
T Consensus        63 ~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS  140 (252)
T PRK06138         63 GSAEAVEALVDFVAARWGRLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTAS  140 (252)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECC
Confidence            9999999999999999999999999999876 5677888999999999999999999999999999877 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      . ++..+.++...|+.+|++++.++++++.|+.+.||+|++++||.+.|++...
T Consensus       141 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (252)
T PRK06138        141 Q-LALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR  193 (252)
T ss_pred             h-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh
Confidence            7 5666777889999999999999999999999999999999999999997643

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-33  Score=258.97  Aligned_cols=194  Identities=26%  Similarity=0.407  Sum_probs=169.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||.++|++|+++|++|++++|+.++++...+++..                 .+.++.++++|
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-----------------~~~~~~~~~~D   69 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA-----------------LGIDALWIAAD   69 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcc
Confidence            3567899999999999999999999999999999999999888777666643                 23567889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHH-HHcCCCCcEEEEe
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV-MRDQPKGGHIFNM  206 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~-m~~~~~~g~Iv~i  206 (388)
                      ++|+++++++++++.+.++++|++|||||... ..+..+.+.+.|++++++|+.+++.+++++.|+ |.++ +.+++|++
T Consensus        70 l~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-~~~~~v~~  147 (259)
T PRK08213         70 VADEADIERLAEETLERFGHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-GYGRIINV  147 (259)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-CCeEEEEE
Confidence            99999999999999999999999999999865 466778899999999999999999999999998 7665 46899999


Q ss_pred             cCCCCCCCCCC----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          207 DGAGSGGSSTP----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       207 sS~~~~~~~~~----~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      ||. ++..+.+    +...|+++|++++++++++++++.++||++|+|+||.++|++..
T Consensus       148 sS~-~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~  205 (259)
T PRK08213        148 ASV-AGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR  205 (259)
T ss_pred             CCh-hhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh
Confidence            986 3443333    34789999999999999999999999999999999999999754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-33  Score=257.63  Aligned_cols=232  Identities=24%  Similarity=0.275  Sum_probs=185.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||++++++|+++|++|++++|+....                          ...++.++.+|+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~   54 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--------------------------LSGNFHFLQLDL   54 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------cCCcEEEEECCh
Confidence            357889999999999999999999999999999999975321                          113578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++      ++++.+.++++|++|||||......++.+.+.+++++++++|+.++++++++++|.|+++ +.++||++||
T Consensus        55 ~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  127 (235)
T PRK06550         55 SDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCS  127 (235)
T ss_pred             HHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            987      444555668999999999985434667888999999999999999999999999999877 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|+++|+++++++++++.|+.++||+||+|+||+++|++.......  .....      ......++.
T Consensus       128 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~------~~~~~~~~~  198 (235)
T PRK06550        128 I-ASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP--GGLAD------WVARETPIK  198 (235)
T ss_pred             h-hhccCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc--hHHHH------HHhccCCcC
Confidence            7 56677788899999999999999999999999999999999999999975432110  00000      001122345


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..+++++..+.|++++...+.++..+..||++
T Consensus       199 ~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        199 RWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             CCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence            5667788888888888887766677777777665

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=256.76  Aligned_cols=192  Identities=28%  Similarity=0.483  Sum_probs=172.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||++++++|+++|++|++++|++++.++..+++.+                 .+.++.++++|++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   66 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK-----------------AGGKAIGVAMDVT   66 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh-----------------cCceEEEEECCCC
Confidence            36789999999999999999999999999999999999888887777654                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHH-HcCCCCcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM-RDQPKGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m-~~~~~~g~Iv~isS  208 (388)
                      |.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.| ++. +.++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss  144 (262)
T PRK13394         67 NEDAVNAGIDKVAERFGSVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGS  144 (262)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcc
Confidence            999999999999999999999999999865 5677788899999999999999999999999999 554 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . .+..+.+....|+++|++++++++.++.++.+.||++|+|+||.+.||+..
T Consensus       145 ~-~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~  196 (262)
T PRK13394        145 V-HSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD  196 (262)
T ss_pred             h-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh
Confidence            7 566777788899999999999999999999999999999999999999754

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=4.6e-33  Score=262.16  Aligned_cols=239  Identities=18%  Similarity=0.218  Sum_probs=176.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ++++||||++|||+++|++|+++|++|++++| +++++++..+++...                .+.++.++.+|++|++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~d~~   65 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR----------------RPNSAVTCQADLSNSA   65 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc----------------cCCceEEEEccCCCch
Confidence            68999999999999999999999999998765 566777666665432                1245777999999998


Q ss_pred             HH----HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCH-----------HHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 016493          133 DV----QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-----------EEIEQIVSTNLVGSILCTREAMRVMRDQ  197 (388)
Q Consensus       133 ~v----~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-----------~~~~~~~~vN~~g~~~l~~~~lp~m~~~  197 (388)
                      ++    +++++.+.+.++++|+||||||... ..++.+.+.           +++++++++|+.+++.++++++|.|+++
T Consensus        66 ~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  144 (267)
T TIGR02685        66 TLFSRCEAIIDACFRAFGRCDVLVNNASAFY-PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGT  144 (267)
T ss_pred             hhHHHHHHHHHHHHHccCCceEEEECCccCC-CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Confidence            65    5566666678899999999999865 344444333           3589999999999999999999999653


Q ss_pred             -----CCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhh
Q 016493          198 -----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF  272 (388)
Q Consensus       198 -----~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  272 (388)
                           +..++|++++|. .+..+.++...|++||+|+++|+++|+.|+.++||+||+|+||++.||....  ......+.
T Consensus       145 ~~~~~~~~~~iv~~~s~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~--~~~~~~~~  221 (267)
T TIGR02685       145 RAEQRSTNLSIVNLCDA-MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP--FEVQEDYR  221 (267)
T ss_pred             ccccCCCCeEEEEehhh-hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc--hhHHHHHH
Confidence                 234689999887 5677788889999999999999999999999999999999999998763211  00000000


Q ss_pred             hhhccCHHHHHHHHh-hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          273 NIICELPETVARTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       273 ~~~~~~pe~vA~~~l-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                                ...++ .+...|++++..+.|++++...+.++..+..+|++
T Consensus       222 ----------~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       222 ----------RKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             ----------HhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence                      00111 13345555566666666665555555555555543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=248.10  Aligned_cols=195  Identities=17%  Similarity=0.278  Sum_probs=171.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.                ....+.++.+|++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~~   66 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA----------------GHPEPFAIRFDLM   66 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc----------------CCCCcceEEeeec
Confidence            468899999999999999999999999999999999998888777766542                1234677899998


Q ss_pred             C--HHHHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          130 E--PADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       130 ~--~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      +  .+++.++.+++.+.+ +++|++|||||...+..++.+.+.+++++.+++|+.+++.++++++|.|.+. +.++++++
T Consensus        67 ~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~  145 (239)
T PRK08703         67 SAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFV  145 (239)
T ss_pred             ccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence            6  568999999998888 8899999999986545678889999999999999999999999999999876 46899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CeEEEEEecCccccccccc
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS-KVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~-gI~vn~v~PG~v~T~~~~~  262 (388)
                      +|. .+..+.++...|++||++++.|+++++.|+.++ +|+||+|+||+|+||+...
T Consensus       146 ss~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~  201 (239)
T PRK08703        146 GES-HGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK  201 (239)
T ss_pred             ecc-ccccCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc
Confidence            987 677788888999999999999999999999887 6999999999999997543

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-32  Score=254.37  Aligned_cols=183  Identities=25%  Similarity=0.351  Sum_probs=167.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||+||||+++|++|+++|++|++.+|+.++++.                         ..+++++++|++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------------------~~~~~~~~~D~~d~   57 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------------------IPGVELLELDVTDD   57 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------------------cCCCeeEEeecCCH
Confidence            56899999999999999999999999999999998764321                         13577899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++.+.+.+|++|++|||||... .+++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. +
T Consensus        58 ~~~~~~~~~~~~~~g~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~-~  134 (270)
T PRK06179         58 ASVQAAVDEVIARAGRIDVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSV-L  134 (270)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCc-c
Confidence            9999999999999999999999999976 5778889999999999999999999999999999987 57899999997 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      +..+.+....|++||+++++++++++.|++++||+|++|+||+++|++...
T Consensus       135 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~  185 (270)
T PRK06179        135 GFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDAN  185 (270)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccc
Confidence            777888889999999999999999999999999999999999999998754

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-33  Score=258.48  Aligned_cols=236  Identities=26%  Similarity=0.315  Sum_probs=185.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++||+++||||++|||.+++++|+++|++|++++|+.+++++..+++                      ...++++|++|
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~~~   62 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----------------------GGLFVPTDVTD   62 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----------------------CCcEEEeeCCC
Confidence            67899999999999999999999999999999999987765544332                      12468999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +++++++++++.+.++++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus        63 ~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~  141 (255)
T PRK06057         63 EDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASF  141 (255)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcch
Confidence            999999999999999999999999998542 2456678899999999999999999999999999876 46899999986


Q ss_pred             CCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH----
Q 016493          210 GSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR----  284 (388)
Q Consensus       210 ~~~~~~~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~----  284 (388)
                       .+..+. ++...|+++|+++.++++.++.++.++||+|++|+||.++|++.......           .++..++    
T Consensus       142 -~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-----------~~~~~~~~~~~  209 (255)
T PRK06057        142 -VAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-----------DPERAARRLVH  209 (255)
T ss_pred             -hhccCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-----------CHHHHHHHHhc
Confidence             333433 46778999999999999999999999999999999999999986432110           1222221    


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                      .+..++..+++++....|++++...+.++..+..||+
T Consensus       210 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        210 VPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             CCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            1223445566666666677766655555555444443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=9.2e-33  Score=256.74  Aligned_cols=241  Identities=22%  Similarity=0.339  Sum_probs=193.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++|+++||||++|||++++++|+++|++|++++|+.++.+++.+++.+                 .+.++.++++|++|
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~d~~~   63 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA-----------------KGGNAQAFACDITD   63 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence            4689999999999999999999999999999999999887777666644                 23568889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .++++++++.+.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++|+++||. 
T Consensus        64 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~-  140 (250)
T TIGR03206        64 RDSVDTAVAAAEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASD-  140 (250)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECch-
Confidence            99999999999999999999999999865 5777888899999999999999999999999999877 46899999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH-----HH
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----RT  285 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA-----~~  285 (388)
                      ++..+.+....|+++|+|+++++++++.++.+.||+++.++||.++|++........         ..++...     ..
T Consensus       141 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~  211 (250)
T TIGR03206       141 AARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---------ENPEKLREAFTRAI  211 (250)
T ss_pred             hhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---------CChHHHHHHHHhcC
Confidence            567778888999999999999999999999988999999999999999754321100         0111111     11


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcC
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  320 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  320 (388)
                      +.+++..++++++.+.|++++...+.+++.+..++
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       212 PLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             CccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence            22334456666666667776655444444444443

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=248.49  Aligned_cols=215  Identities=27%  Similarity=0.335  Sum_probs=186.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||++++++|+++|++|++.+|++++++++.+++.+..               .+.+++++++|++|++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~   66 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY---------------PGIKVAVAALDVNDHD   66 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEEcCCCCHH
Confidence            6899999999999999999999999999999999998887777665431               2457899999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.++++++|++|||||+.. ..++.+.+.+.+++.+++|+.+++.+++.++|.|++. +.++||++||. .+
T Consensus        67 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~~  143 (248)
T PRK08251         67 QVFEVFAEFRDELGGLDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSV-SA  143 (248)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEecc-cc
Confidence            999999999999999999999999976 5667778889999999999999999999999999876 46799999987 45


Q ss_pred             CCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          213 GSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       213 ~~~~~~-~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      ..+.+. ...|+.||++++++++.++.|+.+.||+|++|+||+++|++......       .....+|+++++.+++.+.
T Consensus       144 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        144 VRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------TPFMVDTETGVKALVKAIE  216 (248)
T ss_pred             ccCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------CCccCCHHHHHHHHHHHHh
Confidence            556664 68899999999999999999999899999999999999998654321       1223579999999988775


Q ss_pred             h
Q 016493          292 V  292 (388)
Q Consensus       292 ~  292 (388)
                      .
T Consensus       217 ~  217 (248)
T PRK08251        217 K  217 (248)
T ss_pred             c
Confidence            3

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=254.86  Aligned_cols=193  Identities=25%  Similarity=0.396  Sum_probs=174.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++                 .+.++.++++|++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   66 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA-----------------AGGRAHAIAADLA   66 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            46789999999999999999999999999999999999888877776643                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.+.|.|.++ +.|++|++||.
T Consensus        67 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~  144 (250)
T PRK12939         67 DPASVQRFFDAAAAALGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-GRGRIVNLASD  144 (250)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEECch
Confidence            999999999999999999999999999876 4677888999999999999999999999999999886 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       .+..+.+....|+++|++++.+++.++.++.+.+|+|++|+||+++|++...
T Consensus       145 -~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (250)
T PRK12939        145 -TALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY  196 (250)
T ss_pred             -hhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence             5677778888999999999999999999999999999999999999998754

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=259.04  Aligned_cols=196  Identities=22%  Similarity=0.335  Sum_probs=172.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||.++++.|+++|++|++++|+++++++..+++.+..               .+.++.++++|+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl   67 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK---------------GAGAVRYEPADV   67 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc---------------CCCceEEEEcCC
Confidence            34678999999999999999999999999999999999888776666554310               124688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|++|||||...+..++.+.+.+++++++++|+.+++.+++++++.|.++ +.++|+++||
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS  146 (276)
T PRK05875         68 TDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISS  146 (276)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEec
Confidence            999999999999999999999999999975434677788999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . ++..+.+....|+++|++++.+++.++.|+...+|++++|+||+++|++..
T Consensus       147 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~  198 (276)
T PRK05875        147 I-AASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVA  198 (276)
T ss_pred             h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccc
Confidence            7 566677788999999999999999999999999999999999999999864

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.6e-32  Score=254.22  Aligned_cols=191  Identities=24%  Similarity=0.388  Sum_probs=169.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||++++++|+++|+.|++.+|+.+++++..+++                    +.++.++.+|+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~D~   61 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--------------------GERVKIFPANL   61 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEccC
Confidence            3568899999999999999999999999999999999988776554332                    24577899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++++++++.+.|.++ +.+++|++||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  139 (245)
T PRK12936         62 SDRDEVKALGQKAEADLEGVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-RYGRIINITS  139 (245)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-CCCEEEEECC
Confidence            9999999999999999999999999999876 4667788899999999999999999999999988766 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      . ++..+.+....|+++|+++.++++.++.++.+.||++++|+||+++|++...
T Consensus       140 ~-~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~  192 (245)
T PRK12936        140 V-VGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK  192 (245)
T ss_pred             H-HhCcCCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence            7 5667778889999999999999999999999999999999999999987643

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-32  Score=252.98  Aligned_cols=191  Identities=28%  Similarity=0.426  Sum_probs=164.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|+++||||++|||.++|+.|+++|++|+++. |+++++++..++++.                 .+.++.+++||++|.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-----------------AGGRACVVAGDVANE   64 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEeccCCH
Confidence            37899999999999999999999999998764 666766666666543                 235688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEecCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA  209 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS~  209 (388)
                      ++++++++++.+.++++|++|||||...+..++.+.+.++++.++++|+.+++.+++.++|.|..++  +.++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~  144 (248)
T PRK06947         65 ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSI  144 (248)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence            9999999999999999999999999865445677889999999999999999999999999987652  25789999987


Q ss_pred             CCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       ++..+.+ .+..|++||+++++++++++.++.+.||+|+.|+||+++|++..
T Consensus       145 -~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  196 (248)
T PRK06947        145 -ASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA  196 (248)
T ss_pred             -hhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence             4444444 35689999999999999999999999999999999999999864

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-32  Score=253.33  Aligned_cols=191  Identities=30%  Similarity=0.474  Sum_probs=174.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++|+++||||+++||+++|++|+++|++|++++|+++++++..++++.                 .+.++..+.+|++|
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~   64 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK-----------------AGGKAIGVAMDVTD   64 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence            5789999999999999999999999999999999999988877766644                 24578899999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++++.+.++++|++|||||... ..++.+.+.++++.++++|+.+++.+++.++|.|+++ +.++||++||. 
T Consensus        65 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~-  141 (258)
T PRK12429         65 EEAINAGIDYAVETFGGVDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASV-  141 (258)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcch-
Confidence            99999999999999999999999999876 5677888999999999999999999999999999987 47899999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      ++..+.++...|+++|++++++++.++.|+.+.||+|++++||.+.||+..
T Consensus       142 ~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~  192 (258)
T PRK12429        142 HGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVR  192 (258)
T ss_pred             hhccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhh
Confidence            567788889999999999999999999999999999999999999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-31  Score=248.94  Aligned_cols=217  Identities=24%  Similarity=0.261  Sum_probs=183.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||++++++|+++|++|++++|+.++++++.+++.                   +.++.++++|++|.++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~D~~~~~~   62 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-------------------AGNAWTGALDVTDRAA   62 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-------------------CCceEEEEecCCCHHH
Confidence            789999999999999999999999999999999988776655431                   2468899999999999


Q ss_pred             HHHHHHHHHhh-cCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          134 VQKLSNFAVNE-FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       134 v~~~~~~i~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      ++++++.+.+. ++++|+||||||... ..++.+.+.+++++++++|+.+++.+++++.|+|+++ +.++||++||. .+
T Consensus        63 v~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~~  139 (260)
T PRK08267         63 WDAALADFAAATGGRLDVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSA-SA  139 (260)
T ss_pred             HHHHHHHHHHHcCCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCch-hh
Confidence            99999988776 789999999999976 5778888999999999999999999999999999987 46899999987 67


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-hhhhh-hhhhccCHHHHHHHHhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQM-FNIICELPETVARTLVPRI  290 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~-~~~~~~~pe~vA~~~l~~~  290 (388)
                      ..+.++...|+.||+++++|+++++.|+.+.||+|++|+||+++|++....... ..... ......+|+++|+.++..+
T Consensus       140 ~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~  219 (260)
T PRK08267        140 IYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAV  219 (260)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHH
Confidence            777888899999999999999999999999999999999999999987641111 11111 1122357899999988777


Q ss_pred             hh
Q 016493          291 RV  292 (388)
Q Consensus       291 ~~  292 (388)
                      ..
T Consensus       220 ~~  221 (260)
T PRK08267        220 QH  221 (260)
T ss_pred             hC
Confidence            43

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-31  Score=244.51  Aligned_cols=220  Identities=30%  Similarity=0.463  Sum_probs=188.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++..                 .+.++.++.+|++
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   66 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-----------------YGVKVVIATADVS   66 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCeEEEEECCCC
Confidence            45789999999999999999999999999999999999888777666643                 2357889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      ++++++++++++.++++++|++|||||... .+++.+.+.+++++.+++|+.+++++++.+.|.|.++ +.+++|++||.
T Consensus        67 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~  144 (239)
T PRK07666         67 DYEEVTAAIEQLKNELGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-QSGDIINISST  144 (239)
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEEcch
Confidence            999999999999999999999999999865 4667788999999999999999999999999999877 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|+.+|+++..+++.++.|+.+.||++++|+||.+.|++.........   ......+++++|+.++..
T Consensus       145 -~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~~~~~~a~~~~~~  220 (239)
T PRK07666        145 -AGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDG---NPDKVMQPEDLAEFIVAQ  220 (239)
T ss_pred             -hhccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccccc---CCCCCCCHHHHHHHHHHH
Confidence             5677778888999999999999999999999999999999999999997643211100   011224789999998877


Q ss_pred             hhh
Q 016493          290 IRV  292 (388)
Q Consensus       290 ~~~  292 (388)
                      +..
T Consensus       221 l~~  223 (239)
T PRK07666        221 LKL  223 (239)
T ss_pred             HhC
Confidence            754

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-32  Score=254.70  Aligned_cols=188  Identities=22%  Similarity=0.351  Sum_probs=166.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      ++||||++|||+++++.|+++|++|++++|+ .++++++.+++.+..               ....+..+++|++|++++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~~~   66 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH---------------GEGVAFAAVQDVTDEAQW   66 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC---------------CCceEEEEEeecCCHHHH
Confidence            8999999999999999999999999999998 666766666554321               113456789999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. ++..
T Consensus        67 ~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~-~~~~  143 (251)
T PRK07069         67 QALLAQAADAMGGLSVLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSV-AAFK  143 (251)
T ss_pred             HHHHHHHHHHcCCccEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecCh-hhcc
Confidence            9999999999999999999999876 5778888999999999999999999999999999987 46899999987 6677


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccccccc
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLL  261 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~g--I~vn~v~PG~v~T~~~~  261 (388)
                      +.++...|+++|+++++++++++.|+.+++  |+|++|+||+++||+..
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~  192 (251)
T PRK07069        144 AEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD  192 (251)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh
Confidence            788889999999999999999999998765  99999999999999864

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-32  Score=252.60  Aligned_cols=191  Identities=28%  Similarity=0.448  Sum_probs=163.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|+++||||++|||.++|++|+++|++|++.. |++++.++..+++..                 .+.++.++++|++|.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-----------------QGGEALAVAADVADE   64 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-----------------CCCcEEEEEeccCCH
Confidence            47999999999999999999999999998887 455555555454433                 234578899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEecCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA  209 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS~  209 (388)
                      ++++++++++.++++++|++|||||...+..++.+.+.+++++++++|+.+++.+++.++|.|.++.  ++|+||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~  144 (248)
T PRK06123         65 ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM  144 (248)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECch
Confidence            9999999999999999999999999865345677889999999999999999999999999997642  35789999987


Q ss_pred             CCCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~~~~-~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       ++..+.++ ...|+++|+++++|+++++.|+.+.||+|++|+||.+.||+..
T Consensus       145 -~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        145 -AARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             -hhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence             45555555 3679999999999999999999999999999999999999754

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-31  Score=251.38  Aligned_cols=182  Identities=29%  Similarity=0.416  Sum_probs=164.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||++++++|+++|++|++++|+.+++++.    .+                   ..+.++.+|++|.++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~-------------------~~~~~~~~Dl~~~~~   58 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA-------------------AGFTAVQLDVNDGAA   58 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-------------------CCCeEEEeeCCCHHH
Confidence            7899999999999999999999999999999998765432    11                   135678999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++.+.+.++++|++|||||... .+++.+.+.+++++.+++|+.+++.++++++|.|++.  .|+||++||. ++.
T Consensus        59 ~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~-~~~  134 (274)
T PRK05693         59 LARLAEELEAEHGGLDVLINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSV-SGV  134 (274)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCc-ccc
Confidence            99999999999999999999999876 5778888999999999999999999999999999764  4899999987 667


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      .+.+....|++||+++++++++++.|++++||+|++|+||+|+|++...
T Consensus       135 ~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        135 LVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            7788889999999999999999999999999999999999999998754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=8.5e-32  Score=249.06  Aligned_cols=228  Identities=27%  Similarity=0.344  Sum_probs=191.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      -.|++++||||+.|||++.|++||++|.+|++++|++++|+++.+|+.+++                +.+++++.+|.++
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~----------------~vev~~i~~Dft~  110 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY----------------KVEVRIIAIDFTK  110 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh----------------CcEEEEEEEecCC
Confidence            456999999999999999999999999999999999999999999998874                3679999999998


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      .+.+-+-+.+..+. ..+.+||||+|...+ +..+.+.+.+.+++.+++|..+...+++.++|.|.++ ++|.|+|++|.
T Consensus       111 ~~~~ye~i~~~l~~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS~  188 (312)
T KOG1014|consen  111 GDEVYEKLLEKLAG-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGSF  188 (312)
T ss_pred             CchhHHHHHHHhcC-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEeccc
Confidence            77633322222222 257789999999762 3457777888999999999999999999999999997 68999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.|.++.|++||+.+..|+++|+.|+..+||.|.++.|..|.|+|.....       .+.+..+|+..|+..++-
T Consensus       189 -ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------~sl~~ps~~tfaksal~t  260 (312)
T KOG1014|consen  189 -AGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------PSLFVPSPETFAKSALNT  260 (312)
T ss_pred             -cccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------CCCcCcCHHHHHHHHHhh
Confidence             899999999999999999999999999999999999999999999999865432       234555899999999877


Q ss_pred             hhhccccccceeeccCHH
Q 016493          290 IRVVKGSGKAINYLTPPR  307 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~  307 (388)
                      ++..   ..+..|+.++-
T Consensus       261 iG~~---~~TtGy~~H~i  275 (312)
T KOG1014|consen  261 IGNA---SETTGYLNHAI  275 (312)
T ss_pred             cCCc---ccCCCccchHH
Confidence            7633   23345666553

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-31  Score=250.38  Aligned_cols=187  Identities=29%  Similarity=0.444  Sum_probs=169.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|+++||||++|||++++++|+++|++|++.+|+.++++++.+.+                    +.++.++++|++|+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~   61 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY--------------------GDRLLPLALDVTDR   61 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--------------------cCCeeEEEccCCCH
Confidence            4689999999999999999999999999999999988776543321                    24578899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++.+.+.++++|++|||||... .+++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. +
T Consensus        62 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~-~  138 (275)
T PRK08263         62 AAVFAAVETAVEHFGRLDIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSI-G  138 (275)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcCh-h
Confidence            9999999999999999999999999976 6788899999999999999999999999999999887 46899999987 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      +..+.+....|+++|++++++++.++.|+.+.||+|+.|+||.++|++..
T Consensus       139 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        139 GISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             hcCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence            77788888999999999999999999999999999999999999999874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.8e-31  Score=245.14  Aligned_cols=222  Identities=23%  Similarity=0.243  Sum_probs=196.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++|||+|+|||+++|+++..+|++|.++.|+.+++.++.+++.-....               ..+.+..+|+.|.++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~---------------~~v~~~S~d~~~Y~~   98 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV---------------EDVSYKSVDVIDYDS   98 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc---------------ceeeEeccccccHHH
Confidence            79999999999999999999999999999999999999999988664331               237799999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +..+++++.+.++.+|.+|||||... .+.+.+.++++++..+++|++++++++++.+|.|++..+.|+|+.+||. .+.
T Consensus        99 v~~~~~~l~~~~~~~d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~-~a~  176 (331)
T KOG1210|consen   99 VSKVIEELRDLEGPIDNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQ-LAM  176 (331)
T ss_pred             HHHHHhhhhhccCCcceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhh-hhh
Confidence            99999999999999999999999988 6899999999999999999999999999999999998767899999998 788


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhh----hhhccCHHHHHHHHhhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF----NIICELPETVARTLVPR  289 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~----~~~~~~pe~vA~~~l~~  289 (388)
                      .+.+++++|+++|+|+.+|++++++|+.++||+|....|+.++||.+.......+....    ..-...+|++|...++.
T Consensus       177 ~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~  256 (331)
T KOG1210|consen  177 LGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKG  256 (331)
T ss_pred             cCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhH
Confidence            99999999999999999999999999999999999999999999987654332222111    11114699999999987


Q ss_pred             hhh
Q 016493          290 IRV  292 (388)
Q Consensus       290 ~~~  292 (388)
                      +.+
T Consensus       257 ~~r  259 (331)
T KOG1210|consen  257 MKR  259 (331)
T ss_pred             Hhh
Confidence            764

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-32  Score=253.51  Aligned_cols=192  Identities=26%  Similarity=0.394  Sum_probs=172.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++|+++||||++|||..++++|+++|++ |++++|+.++.++..+++.+                 .+.++.++.+|+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   65 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-----------------LGAKAVFVQADL   65 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEEccC
Confidence            367899999999999999999999999998 99999998887766666633                 345788899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++.+.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|.+++..+++|++||
T Consensus        66 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss  144 (260)
T PRK06198         66 SDVEDCRRVVAAADEAFGRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS  144 (260)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence            9999999999999999999999999999876 567778899999999999999999999999999987645689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      . ++..+.++...|+++|+++++++++++.|+...||+|++|+||+++|++.
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        145 M-SAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             c-ccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            7 56667788899999999999999999999999999999999999999874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.8e-31  Score=243.29  Aligned_cols=193  Identities=25%  Similarity=0.431  Sum_probs=169.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||.++|++|+++|++|++..+ +++..++..+++.+                 .+.++.++++|+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   65 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-----------------EGHDVYAVQADV   65 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-----------------cCCeEEEEECCC
Confidence            367899999999999999999999999999987654 55666655555543                 235789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||... ...+.+.+.+++++++++|+.+++.++++++|.|.++ +.+++|++||
T Consensus        66 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  143 (247)
T PRK12935         66 SKVEDANRLVEEAVNHFGKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISS  143 (247)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcc
Confidence            9999999999999999999999999999876 4667788899999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      . ++..+.++...|++||+++++++++++.|+.+.||+++.|+||.++|++...
T Consensus       144 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (247)
T PRK12935        144 I-IGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE  196 (247)
T ss_pred             h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh
Confidence            7 5666778889999999999999999999999999999999999999987543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=2.9e-31  Score=234.10  Aligned_cols=213  Identities=25%  Similarity=0.337  Sum_probs=174.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeE-EEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLS-GDRV-VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~-G~~V-il~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ..|.++||||++|||+.++|+|.+. |-.+ +.++|++++.   .+++.....              ...+++.+++|++
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~--------------~d~rvHii~Ldvt   64 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSK--------------SDSRVHIIQLDVT   64 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhc--------------cCCceEEEEEecc
Confidence            4577999999999999999999975 5554 4556778875   233333221              3589999999999


Q ss_pred             CHHHHHHHHHHHHhh--cCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC---------
Q 016493          130 EPADVQKLSNFAVNE--FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---------  198 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~--~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---------  198 (388)
                      +.++++++++++.+-  ..++|+||||||+..++....+.+.+.|-+++++|..|++.++|+++|++++..         
T Consensus        65 ~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s  144 (249)
T KOG1611|consen   65 CDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLS  144 (249)
T ss_pred             cHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccc
Confidence            999999999999887  457999999999988778888888899999999999999999999999998752         


Q ss_pred             -CCcEEEEecCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhh
Q 016493          199 -KGGHIFNMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  275 (388)
Q Consensus       199 -~~g~Iv~isS~~~~~~~--~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  275 (388)
                       .++.|||+||..++..+  ..+..+|.+||+|++.|+|+++.|+++.+|-|..+|||+|+|+|.....           
T Consensus       145 ~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a-----------  213 (249)
T KOG1611|consen  145 VSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA-----------  213 (249)
T ss_pred             ccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc-----------
Confidence             23579999987544332  2456899999999999999999999999999999999999999975322           


Q ss_pred             ccCHHHHHHHHhhhhhh
Q 016493          276 CELPETVARTLVPRIRV  292 (388)
Q Consensus       276 ~~~pe~vA~~~l~~~~~  292 (388)
                      ..++|+-+..++.-+..
T Consensus       214 ~ltveeSts~l~~~i~k  230 (249)
T KOG1611|consen  214 ALTVEESTSKLLASINK  230 (249)
T ss_pred             ccchhhhHHHHHHHHHh
Confidence            23788888888766543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=6.8e-32  Score=284.14  Aligned_cols=257  Identities=21%  Similarity=0.261  Sum_probs=204.8

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+...               ..++..+++
T Consensus       408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~---------------~~~~~~v~~  472 (676)
T TIGR02632       408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFG---------------AGRAVALKM  472 (676)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcC---------------CCcEEEEEC
Confidence            34567899999999999999999999999999999999999888777666654211               135778999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+.+|++|++|||||... ..++.+.+.++|+..+++|+.+++.+++.++|.|++++.+++||++
T Consensus       473 Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~i  551 (676)
T TIGR02632       473 DVTDEQAVKAAFADVALAYGGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFI  551 (676)
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            999999999999999999999999999999866 4778888999999999999999999999999999987556899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc--ccccCccchhhhhhhhhccCHH----
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD--LLLSGSTIQNKQMFNIICELPE----  280 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~--~~~~~~~~~~~~~~~~~~~~pe----  280 (388)
                      ||. .+..+.++...|++||+++++++++++.|+++.||+||+|+||.|.|+  ++.....  .... ......++    
T Consensus       552 SS~-~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~--~~~~-~~~~~~~~~~~~  627 (676)
T TIGR02632       552 ASK-NAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWR--EERA-AAYGIPADELEE  627 (676)
T ss_pred             eCh-hhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccch--hhhh-hcccCChHHHHH
Confidence            987 567788889999999999999999999999999999999999999653  3221100  0000 00001111    


Q ss_pred             -HHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          281 -TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       281 -~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                       ...+.++++...+++++..+.|++++.....++..+..||++.
T Consensus       628 ~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       628 HYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence             1223345566678888888888887666566677777776653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.5e-32  Score=249.34  Aligned_cols=190  Identities=25%  Similarity=0.353  Sum_probs=165.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||.++|++|+++|++|++++|+..+  . .+++.+....             .+.++.++.+|++|.++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~--~-~~~~~~~~~~-------------~~~~~~~~~~D~~~~~~   66 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND--C-AKDWFEEYGF-------------TEDQVRLKELDVTDTEE   66 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH--H-HHHHHHHhhc-------------cCCeEEEEEcCCCCHHH
Confidence            689999999999999999999999999999998641  1 1222111110             23568899999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++.+.++++++|++|||+|... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||. .+.
T Consensus        67 v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~-~~~  143 (245)
T PRK12824         67 CAEALAEIEEEEGPVDILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV-NGL  143 (245)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECCh-hhc
Confidence            99999999999999999999999876 5677888999999999999999999999999999876 46899999987 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      .+.++...|+++|+++++++++++.|+.+.||+++.++||.+.|++...
T Consensus       144 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  192 (245)
T PRK12824        144 KGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ  192 (245)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh
Confidence            7788899999999999999999999999999999999999999997643

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=248.00  Aligned_cols=191  Identities=26%  Similarity=0.433  Sum_probs=167.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||.+++++|+++|++|++++|+++..+++.+++.+                 .+.++..+.+|+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl   64 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA-----------------DGGTAIAVQVDV   64 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCC
Confidence            356889999999999999999999999999999999998877776666543                 124577899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCC--CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG--FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      +|.++++++++++.+.++++|+||||||+...  ..++.+.+.+++++++++|+.++++++++++|.|.++ +.++||++
T Consensus        65 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~  143 (250)
T PRK07774         65 SDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQ  143 (250)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-CCcEEEEE
Confidence            99999999999999999999999999998531  2456778899999999999999999999999999876 46899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      ||. ++.   ++...|++||++++.+++++++++.+.||++++++||.++|++..
T Consensus       144 sS~-~~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  194 (250)
T PRK07774        144 SST-AAW---LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATR  194 (250)
T ss_pred             ecc-ccc---CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccc
Confidence            987 333   345789999999999999999999999999999999999999854

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.98  E-value=1.4e-31  Score=247.34  Aligned_cols=237  Identities=22%  Similarity=0.295  Sum_probs=185.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |+++||||++|||+++|++|+++|++|+++.| ++++.++..+++..                 .+.++.++.+|++|++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   63 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA-----------------LGFDFRVVEGDVSSFE   63 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------hCCceEEEEecCCCHH
Confidence            78999999999999999999999999999988 65555554444332                 2356889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||. .+
T Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~-~~  140 (242)
T TIGR01829        64 SCKAAVAKVEAELGPIDVLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSV-NG  140 (242)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch-hh
Confidence            999999999999999999999999876 4667888999999999999999999999999999877 46899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      ..+.++...|+++|+++..+++++++|+.+.||++++++||+++|++...........          .....+..++..
T Consensus       141 ~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~----------~~~~~~~~~~~~  210 (242)
T TIGR01829       141 QKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNS----------IVAQIPVGRLGR  210 (242)
T ss_pred             cCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHH----------HHhcCCCCCCcC
Confidence            6777888999999999999999999999999999999999999999764321110000          001112334445


Q ss_pred             ccccccceeeccCHHHHHHHHHhHhhcC
Q 016493          293 VKGSGKAINYLTPPRILLALVTAWLRRG  320 (388)
Q Consensus       293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g  320 (388)
                      +++++..+.|++.++..+.++..+..+|
T Consensus       211 ~~~~a~~~~~l~~~~~~~~~G~~~~~~g  238 (242)
T TIGR01829       211 PEEIAAAVAFLASEEAGYITGATLSING  238 (242)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEecC
Confidence            5556665666666554333444443333

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=241.80  Aligned_cols=213  Identities=22%  Similarity=0.244  Sum_probs=182.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||.+++++|+++|++|++++|++++.++..+++...                .+.++.++++|++|++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~~~   64 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR----------------GAVAVSTHELDILDTA   64 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCeEEEEecCCCChH
Confidence            378999999999999999999999999999999998887776666432                2357899999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+   ++|++|||+|... ..+..+.+.+++++.+++|+.+++++++++.|.|.++ +.++++++||. ++
T Consensus        65 ~~~~~~~~~~~---~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~  138 (243)
T PRK07102         65 SHAAFLDSLPA---LPDIVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-GSGTIVGISSV-AG  138 (243)
T ss_pred             HHHHHHHHHhh---cCCEEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCEEEEEecc-cc
Confidence            99999988754   4799999999866 4667788899999999999999999999999999987 46899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      ..+.++...|+++|+++.+++++++.|+.+.||+|++|+||+++|++......      ......+|+++++.+++.+..
T Consensus       139 ~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        139 DRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKL------PGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             cCCCCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCC------CccccCCHHHHHHHHHHHHhC
Confidence            67778888999999999999999999999999999999999999997643221      112235799999999877764


Q ss_pred             c
Q 016493          293 V  293 (388)
Q Consensus       293 ~  293 (388)
                      .
T Consensus       213 ~  213 (243)
T PRK07102        213 G  213 (243)
T ss_pred             C
Confidence            3

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.98  E-value=1.7e-30  Score=241.96  Aligned_cols=184  Identities=28%  Similarity=0.427  Sum_probs=163.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++||||++|||.++|++|+++|++|++++|++++++++.+++                    +.++.++.+|++|.++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~~~~~   60 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--------------------GDNLYIAQLDVRNRAA   60 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------ccceEEEEecCCCHHH
Confidence            36999999999999999999999999999999988776554432                    2357889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.+.++++|++|||||......++.+.+.+++++++++|+.+++.+++.++|.|+++ +.++||++||. ++.
T Consensus        61 i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~~~  138 (248)
T PRK10538         61 IEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGST-AGS  138 (248)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCc-ccC
Confidence            9999999999999999999999985434567788999999999999999999999999999876 46899999987 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .+.++...|+++|++++++++.++.|+.+.||+||+|+||.+.|+.
T Consensus       139 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        139 WPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence            7778888999999999999999999999999999999999998443

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2.2e-30  Score=240.77  Aligned_cols=194  Identities=25%  Similarity=0.419  Sum_probs=169.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||.++|+.|+++|++|++++|+++++++..++++.                 .+.++.++++|+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   63 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA-----------------LGTEVRGYAANV   63 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCC
Confidence            357899999999999999999999999999999999999888777666644                 245788899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC--------c-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------L-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      ++.++++++++.+.+.++++|++|||||...+ .+        + .+.+.++++.++++|+.+++.+++.++|.|.++..
T Consensus        64 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~  142 (253)
T PRK08217         64 TDEEDVEATFAQIAEDFGQLNGLINNAGILRD-GLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS  142 (253)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCccCc-CcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            99999999999998888999999999997542 21        2 56788999999999999999999999999987655


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      .++|+++||.  +..+.++...|++||+|+++++++++.|+.++||++++++||.++|++...
T Consensus       143 ~~~iv~~ss~--~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~  203 (253)
T PRK08217        143 KGVIINISSI--ARAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA  203 (253)
T ss_pred             CeEEEEEccc--cccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence            6889999886  345667789999999999999999999999999999999999999998643

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.1e-31  Score=276.76  Aligned_cols=217  Identities=22%  Similarity=0.310  Sum_probs=186.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+.++.++++|++
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~  430 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA-----------------KGGTAHAYTCDLT  430 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEecCC
Confidence            56799999999999999999999999999999999999988887777654                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCC--CHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF--TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~--~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      |.++++++++++.+.+|++|++|||||... ...+.+.  +.+++++++++|+.+++.+++.++|.|+++ +.++||++|
T Consensus       431 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  508 (657)
T PRK07201        431 DSAAVDHTVKDILAEHGHVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVS  508 (657)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEC
Confidence            999999999999999999999999999864 2333332  257899999999999999999999999987 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.+..+.|++||+++++|+++++.|+.+.||+||+|+||+|+|++......     .......+|+++|+.++
T Consensus       509 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----~~~~~~~~~~~~a~~i~  582 (657)
T PRK07201        509 SI-GVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----YNNVPTISPEEAADMVV  582 (657)
T ss_pred             Ch-hhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----ccCCCCCCHHHHHHHHH
Confidence            98 6777788889999999999999999999999999999999999999998753211     11223458999999998


Q ss_pred             hhhh
Q 016493          288 PRIR  291 (388)
Q Consensus       288 ~~~~  291 (388)
                      ..+.
T Consensus       583 ~~~~  586 (657)
T PRK07201        583 RAIV  586 (657)
T ss_pred             HHHH
Confidence            7764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=7.7e-32  Score=234.89  Aligned_cols=187  Identities=28%  Similarity=0.366  Sum_probs=170.0

Q ss_pred             CCCCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGST-RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas-~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .-..|.|+|||+| ||||.++|++|+++|+.|+.++|+.+...++..+                      ..+.+.++|+
T Consensus         4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----------------------~gl~~~kLDV   61 (289)
T KOG1209|consen    4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----------------------FGLKPYKLDV   61 (289)
T ss_pred             ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----------------------hCCeeEEecc
Confidence            3467899999986 8999999999999999999999998887665432                      3588899999


Q ss_pred             CCHHHHHHHHHHHHh-hcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVN-EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~-~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++++++.++..++.+ .+|++|+|+||||..= ..|..+.+.++.++.|++|++|+++++|++...+.+.  +|.|||+.
T Consensus        62 ~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvg  138 (289)
T KOG1209|consen   62 SKPEEVVTVSGEVRANPDGKLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVG  138 (289)
T ss_pred             CChHHHHHHHHHHhhCCCCceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEec
Confidence            999999999999988 7899999999999865 6888999999999999999999999999999777664  69999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |. .+..+.|..+.|++||+|++++++.|+.|+++.||+|..+.||-|.|++...
T Consensus       139 Sl-~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  139 SL-AGVVPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ce-eEEeccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            98 7899999999999999999999999999999999999999999999998655

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-30  Score=245.89  Aligned_cols=191  Identities=25%  Similarity=0.337  Sum_probs=170.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||+||||.++|++|+++|++|++++|+.+++++..+++....               .+.++.++.+|++|+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~d~   66 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN---------------LQQNIKVQQLDVTDQ   66 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCceeEEecCCCCH
Confidence            57899999999999999999999999999999999988877665554310               124688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++++ ++++.+.++++|++|||||... .+++.+.+.+++++.+++|+.+++.+++.++|.|++. +.++||++||. +
T Consensus        67 ~~~~~-~~~~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~-~  142 (280)
T PRK06914         67 NSIHN-FQLVLKEIGRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSI-S  142 (280)
T ss_pred             HHHHH-HHHHHHhcCCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcc-c
Confidence            99999 8889899999999999999876 4677788999999999999999999999999999877 46899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      +..+.++...|++||+++++|+++++.|+.++||+|++++||+++|+++.
T Consensus       143 ~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  192 (280)
T PRK06914        143 GRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWE  192 (280)
T ss_pred             ccCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence            67778888999999999999999999999999999999999999999764

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.9e-30  Score=242.08  Aligned_cols=192  Identities=23%  Similarity=0.371  Sum_probs=170.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..                 .+.++.++.+|++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   69 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA-----------------DGGEAVAFPLDVT   69 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            45678999999999999999999999999999999998877666555543                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|++|||||... ..+..+.+.+.+++.+++|+.+++++++.++|.|+++ +.++||++||.
T Consensus        70 ~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~g~iv~isS~  147 (274)
T PRK07775         70 DPDSVKSFVAQAEEALGEIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-RRGDLIFVGSD  147 (274)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECCh
Confidence            999999999999998999999999999866 4667788999999999999999999999999999876 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       .+..+.++...|+++|++++++++++++++.+.||++++|+||+++|++..
T Consensus       148 -~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        148 -VALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW  198 (274)
T ss_pred             -HhcCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence             566777778899999999999999999999989999999999999998653

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=3.6e-31  Score=245.20  Aligned_cols=194  Identities=29%  Similarity=0.467  Sum_probs=173.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++.+|+++||||++|||.++|++|+++|++|+++ +|+.++.++..+++..                 .+.++.++.+|
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE-----------------EGGDAIAVKAD   63 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEECC
Confidence            35778999999999999999999999999999999 9998887776666543                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.+++|++|
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~s  141 (247)
T PRK05565         64 VSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-KSGVIVNIS  141 (247)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEC
Confidence            99999999999999999999999999999875 5777888999999999999999999999999999877 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |. .+..+.+....|+.+|++++.++++++.++.+.||++++|+||.++|++...
T Consensus       142 S~-~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~  195 (247)
T PRK05565        142 SI-WGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS  195 (247)
T ss_pred             CH-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence            87 5666777888999999999999999999999999999999999999997654

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-30  Score=240.46  Aligned_cols=189  Identities=22%  Similarity=0.331  Sum_probs=164.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +..+|+++||||++|||++++++|+++|++|++++| +.+.++++.+++..                 .+.++.++.+|+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl   68 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA-----------------LGRRAVALQADL   68 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCC
Confidence            456899999999999999999999999999988766 45556655555543                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++++++++.|.|+++ ..++|++++|
T Consensus        69 ~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~~s  146 (258)
T PRK09134         69 ADEAEVRALVARASAALGPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-ARGLVVNMID  146 (258)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence            9999999999999999999999999999876 4677888999999999999999999999999999876 4689999987


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      . ....+.|.+..|++||++++++++++++|+.+. |+||+|+||++.|+.
T Consensus       147 ~-~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~  195 (258)
T PRK09134        147 Q-RVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSG  195 (258)
T ss_pred             h-hhcCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCc
Confidence            6 556667777899999999999999999999876 999999999998865

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4e-30  Score=239.12  Aligned_cols=217  Identities=19%  Similarity=0.273  Sum_probs=180.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+.                ...++.++.+|++
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~d~~   72 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA----------------GGPQPAIIPLDLL   72 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc----------------CCCCceEEEeccc
Confidence            468999999999999999999999999999999999998887776666542                1234566777776


Q ss_pred             --CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          130 --EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       130 --~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                        +.++++++++.+.+.++++|++|||||...+..++.+.+.+++++.+++|+.++++++++++|.|+++ +.++||++|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~~s  151 (247)
T PRK08945         73 TATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVFTS  151 (247)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEEc
Confidence              78999999999999999999999999986545677888999999999999999999999999999987 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.++...|++||++++++++.++.++...||++++++||.++|++..........    ....+|+++++.++
T Consensus       152 s~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~~~----~~~~~~~~~~~~~~  226 (247)
T PRK08945        152 SS-VGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGEDP----QKLKTPEDIMPLYL  226 (247)
T ss_pred             cH-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcccc----cCCCCHHHHHHHHH
Confidence            87 56677788899999999999999999999999999999999999999875332211111    11235677766655


Q ss_pred             h
Q 016493          288 P  288 (388)
Q Consensus       288 ~  288 (388)
                      .
T Consensus       227 ~  227 (247)
T PRK08945        227 Y  227 (247)
T ss_pred             H
Confidence            4

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=1.3e-30  Score=242.75  Aligned_cols=189  Identities=32%  Similarity=0.522  Sum_probs=163.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHHHHHHhhhhhhcCCCCcccccC-ceEEEEEc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVH-AKVAGIAC  126 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~  126 (388)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+.+.  .++..+...   .              .+ ..+.+..+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~--------------~~~~~~~~~~~   64 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK---E--------------AGGGRAAAVAA   64 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH---h--------------cCCCcEEEEEe
Confidence            5689999999999999999999999999999988887664  333322222   0              11 36888899


Q ss_pred             cCCC-HHHHHHHHHHHHhhcCCccEEEEccccCCCC-CCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          127 DVCE-PADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       127 Dls~-~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      |+++ .++++.+++.+.+.+|++|++|||||+.. . .++.+.+.+++++++++|+.+++.+++.+.|.|++  +  +||
T Consensus        65 Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~--~Iv  139 (251)
T COG1028          65 DVSDDEESVEALVAAAEEEFGRIDILVNNAGIAG-PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK--Q--RIV  139 (251)
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh--C--eEE
Confidence            9998 99999999999999999999999999976 4 48899999999999999999999999988888883  2  999


Q ss_pred             EecCCCCCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          205 NMDGAGSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       205 ~isS~~~~~~~~~~-~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ++||. .+. +.++ ..+|++||+|+.+|++.++.|+.++||+||+|+||+++|++...
T Consensus       140 ~isS~-~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~  196 (251)
T COG1028         140 NISSV-AGL-GGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAA  196 (251)
T ss_pred             EECCc-hhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhh
Confidence            99998 555 6666 49999999999999999999999999999999999999998754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.7e-31  Score=246.24  Aligned_cols=192  Identities=24%  Similarity=0.371  Sum_probs=165.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|+++||||++|||.++|++|+++|++|++++|+. +..++..++++.                 .+.++.++++|++|+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~   64 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-----------------LGVEVIFFPADVADL   64 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-----------------cCCceEEEEecCCCH
Confidence            37999999999999999999999999999999874 344444444432                 235688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-----CcEEEE
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-----GGHIFN  205 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-----~g~Iv~  205 (388)
                      +++.++++++.+.++++|++|||||...+ ..++.+.+.+++++.+++|+.++++++++++|.|+++.+     .++||+
T Consensus        65 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  144 (256)
T PRK12745         65 SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVF  144 (256)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEE
Confidence            99999999999999999999999998532 346778899999999999999999999999999987643     467999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      +||. .+..+.++...|++||+++++++++++.|+.++||+|++|+||.+.|++...
T Consensus       145 ~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        145 VSSV-NAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             ECCh-hhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence            9987 5667778888999999999999999999999999999999999999987543

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-31  Score=245.98  Aligned_cols=239  Identities=22%  Similarity=0.298  Sum_probs=182.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||+++++.|+++|++|++++|+.+++++..++                      ....++.+|
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----------------------~~~~~~~~D   61 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE----------------------TGCEPLRLD   61 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------------------hCCeEEEec
Confidence            3567899999999999999999999999999999999998776543322                      124568899


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++.++++++++.    .+++|++|||||... ..+..+.+.+++++.+++|+.+++.+++++++.+++++..++||++|
T Consensus        62 ~~~~~~v~~~~~~----~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s  136 (245)
T PRK07060         62 VGDDAAIRAALAA----AGAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVS  136 (245)
T ss_pred             CCCHHHHHHHHHH----hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEc
Confidence            9999988887765    478999999999866 56677788999999999999999999999999998664458999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.+....|+++|++++.++++++.++.+.||++++++||++.|++........... .       ......+.
T Consensus       137 S~-~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~-~-------~~~~~~~~  207 (245)
T PRK07060        137 SQ-AALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKS-G-------PMLAAIPL  207 (245)
T ss_pred             cH-HHcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHH-H-------HHHhcCCC
Confidence            87 566777888999999999999999999999999999999999999999854321110000 0       00011122


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .++..+++++..+.+++++.....++..+..+|++
T Consensus       208 ~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        208 GRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence            33445555555555666555444455555555544

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-30  Score=240.17  Aligned_cols=204  Identities=20%  Similarity=0.283  Sum_probs=171.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++||||++|||+++|++|+++|++|++++|++++++++.++                     ..++.++++|++|+++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~   60 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ---------------------SANIFTLAFDVTDHPG   60 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---------------------cCCCeEEEeeCCCHHH
Confidence            7899999999999999999999999999999998776544321                     1357789999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++..   .+|++|||||... ..+..+.+.+++++++++|+.+++++++.++|.|++   +++||++||. ++.
T Consensus        61 ~~~~~~~~~~---~~d~~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~-~~~  132 (240)
T PRK06101         61 TKAALSQLPF---IPELWIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSI-ASE  132 (240)
T ss_pred             HHHHHHhccc---CCCEEEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEech-hhc
Confidence            9999887642   4799999999754 344456789999999999999999999999999963   4689999987 567


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      .+.++...|++||+++++|+++++.|+.++||+|++|+||.++|++.......      .....+|+++|+.++..+..
T Consensus       133 ~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~------~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        133 LALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFA------MPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCC------CCcccCHHHHHHHHHHHHhc
Confidence            77888899999999999999999999999999999999999999986532111      11124799999999988764

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-31  Score=245.49  Aligned_cols=191  Identities=25%  Similarity=0.377  Sum_probs=167.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||.++|++|+++|++|++. .|+.+++++..+++.+                 .+.++.++++|+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   65 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIES-----------------NGGKAFLIEADL   65 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCc
Confidence            3678999999999999999999999999999775 7888777666665543                 234688899999


Q ss_pred             CCHHHHHHHHHHHHhhc------CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          129 CEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~------g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      +|++++.++++++.+++      +++|++|||||... ..++.+.+.+.++.++++|+.+++++++.++|.|++.   ++
T Consensus        66 ~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~  141 (254)
T PRK12746         66 NSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE---GR  141 (254)
T ss_pred             CCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC---CE
Confidence            99999999999998877      47999999999876 4677888999999999999999999999999999643   68


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      +|++||. .+..+.++...|++||+++++++++++.++.+.|++|++++||+++|++...
T Consensus       142 ~v~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~  200 (254)
T PRK12746        142 VINISSA-EVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK  200 (254)
T ss_pred             EEEECCH-HhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh
Confidence            9999887 5667788889999999999999999999999999999999999999998643

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=242.01  Aligned_cols=193  Identities=28%  Similarity=0.434  Sum_probs=166.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|.    .+..++..+++..                 .+.++.++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~   65 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-----------------AGGKALGLA   65 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-----------------cCCcEEEEE
Confidence            3578999999999999999999999999999997664    3444444333322                 235688999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHH-HHHHcCCCCcEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIF  204 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-p~m~~~~~~g~Iv  204 (388)
                      +|++|.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++++. |.|+++ +.+++|
T Consensus        66 ~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv  143 (249)
T PRK12827         66 FDVRDFAATRAALDAGVEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIV  143 (249)
T ss_pred             ccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEE
Confidence            9999999999999999999899999999999876 4678888999999999999999999999999 666655 568999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ++||. .+..+.++...|+.+|++++.++++++.|+.+.||++++|+||+++|++...
T Consensus       144 ~~sS~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        144 NIASV-AGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN  200 (249)
T ss_pred             EECCc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence            99987 5666778889999999999999999999999999999999999999997654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=238.36  Aligned_cols=218  Identities=27%  Similarity=0.418  Sum_probs=183.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||++++++|+++|++|++++|++++.+++.+++..                 .+.++.++.+|++|.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~   63 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD-----------------HGGEALVVPTDVSDAE   63 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCHH
Confidence            47899999999999999999999999999999998887776666543                 2356888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCC-CHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF-TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++++++++.++++++|++|||||... ..++.+. +.+++++.+++|+.+++.+++.+.|.|.++  .+++|++||. +
T Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~-~  139 (263)
T PRK06181         64 ACERLIEAAVARFGGIDILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSL-A  139 (263)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecc-c
Confidence            999999999999999999999999876 4667777 899999999999999999999999999765  4899999887 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh-----hhhhhccCHHHHHHHH
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-----MFNIICELPETVARTL  286 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~pe~vA~~~  286 (388)
                      +..+.++...|+++|+++++++++++.++.+++|++++++||.+.|++...........     .......+|+++|+.+
T Consensus       140 ~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  219 (263)
T PRK06181        140 GLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAI  219 (263)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHH
Confidence            66778888999999999999999999999999999999999999999865321110000     0001235789999988


Q ss_pred             hhhhh
Q 016493          287 VPRIR  291 (388)
Q Consensus       287 l~~~~  291 (388)
                      +..+.
T Consensus       220 ~~~~~  224 (263)
T PRK06181        220 LPAIA  224 (263)
T ss_pred             HHHhh
Confidence            87665

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=240.16  Aligned_cols=186  Identities=25%  Similarity=0.424  Sum_probs=166.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|++|||||+||||+++|++|+++|++|++++|+++.++++.++.                    +.++.++++|++|.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~   61 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY--------------------GDRLWVLQLDVTDSA   61 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------------------cCceEEEEccCCCHH
Confidence            378999999999999999999999999999999987665443221                    246788999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+.++++|++|||||... .++..+.+.+++++.+++|+.++++++++++|+|+++ +.++||++||. ++
T Consensus        62 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~  138 (276)
T PRK06482         62 AVRAVVDRAFAALGRIDVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSE-GG  138 (276)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCc-cc
Confidence            999999999999999999999999976 5777888899999999999999999999999999876 46899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      ..+.++...|++||+++++++++++.++.+.||+++.++||.+.|++..
T Consensus       139 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~  187 (276)
T PRK06482        139 QIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGA  187 (276)
T ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcc
Confidence            6677888999999999999999999999999999999999999998754

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=242.27  Aligned_cols=186  Identities=26%  Similarity=0.403  Sum_probs=164.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.                   +.++.++++|++|.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~D~~~~~   62 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-------------------DARFVPVACDLTDAA   62 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------------------CCceEEEEecCCCHH
Confidence            5899999999999999999999999999999999888776655541                   245888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      ++.++++++.++++++|++|||+|... ..++.+.+++++++.+++|+.+++.+.+++++.|+++ +.++|+++||. .+
T Consensus        63 ~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~~  139 (257)
T PRK07074         63 SLAAALANAAAERGPVDVLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNIGSV-NG  139 (257)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEcch-hh
Confidence            999999999999999999999999876 4677788999999999999999999999999999876 46899999986 33


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      .. ..+...|+++|++++.++++++.|+.++||+|++++||+++|++..
T Consensus       140 ~~-~~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        140 MA-ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE  187 (257)
T ss_pred             cC-CCCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence            32 3456789999999999999999999999999999999999999754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=4.7e-30  Score=237.90  Aligned_cols=190  Identities=24%  Similarity=0.345  Sum_probs=164.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |+++||||++|||++++++|+++|++|++ ..|++++.++...++.+                 .+.++..+++|++|++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~~   64 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ-----------------AGGKAFVLQADISDEN   64 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------CCCeEEEEEccCCCHH
Confidence            68999999999999999999999999987 46777777766666543                 2356888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEecCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAG  210 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS~~  210 (388)
                      +++++++++.+.++++|++|||||......++.+.+.++++.++++|+.+++.+++.+++.|.++.  ++|++|++||. 
T Consensus        65 ~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~-  143 (247)
T PRK09730         65 QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSA-  143 (247)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECch-
Confidence            999999999999999999999999864356678889999999999999999999999999998652  35789999987 


Q ss_pred             CCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          211 SGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       211 ~~~~~~~~-~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      .+..+.++ ...|+++|+++++++++++.|+.+.||++++|+||.+.||+..
T Consensus       144 ~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        144 ASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             hhccCCCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence            45555554 4679999999999999999999999999999999999999754

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=235.79  Aligned_cols=187  Identities=24%  Similarity=0.335  Sum_probs=160.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |+++||||++|||+++|++|+++|++|++++|++ +.+++.    .+.                .+.+++++++|++|++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~----------------~~~~~~~~~~D~~~~~   61 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQ----------------YNSNLTFHSLDLQDVH   61 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----Hhc----------------cCCceEEEEecCCCHH
Confidence            7899999999999999999999999999999987 333222    111                2346888999999999


Q ss_pred             HHHHHHHHHHhhcCCc--c--EEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          133 DVQKLSNFAVNEFGSI--D--IWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~i--D--~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++.+.++..  |  ++|+|||...+..++.+.+.+++++.+++|+.+++.+++.++|+|++.+..++||++||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (251)
T PRK06924         62 ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS  141 (251)
T ss_pred             HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecc
Confidence            9999999988776532  2  89999998655567889999999999999999999999999999987644679999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . .+..+.++...|+++|+|++++++.++.|++  +.||+|++|+||+++|++..
T Consensus       142 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  195 (251)
T PRK06924        142 G-AAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA  195 (251)
T ss_pred             h-hhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence            7 6777888899999999999999999999975  46899999999999999854

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.4e-29  Score=232.28  Aligned_cols=190  Identities=30%  Similarity=0.485  Sum_probs=165.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++++|+++||||++|||++++++|+++|++|++..|+ .+...+....+++                 .+.++..+.+|
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   64 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-----------------NGGEGIGVLAD   64 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-----------------cCCeeEEEEec
Confidence            45788999999999999999999999999999887754 4444444444433                 23467789999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++++++++++++++.+.++++|++|||||... ..++.+.+.+.+++.+++|+.+++.+++++.|.|++   .+++|++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~s  140 (252)
T PRK06077         65 VSTREGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIA  140 (252)
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEc
Confidence            99999999999999999999999999999866 567778888999999999999999999999999975   37999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      |. ++..+.++...|++||++++++++++++|+.+ +|+++.++||+++|++..
T Consensus       141 S~-~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~  192 (252)
T PRK06077        141 SV-AGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGE  192 (252)
T ss_pred             ch-hccCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHH
Confidence            87 67788888999999999999999999999988 899999999999999753

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.2e-29  Score=229.79  Aligned_cols=218  Identities=27%  Similarity=0.444  Sum_probs=184.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+++++++..+++.+                 . .+++++++|++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~-~~~~~~~~D~~   64 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN-----------------K-GNVLGLAADVR   64 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc-----------------c-CcEEEEEccCC
Confidence            45789999999999999999999999999999999999888777666543                 1 45888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++++.+.++++|++|||+|... .+++.+.+.+++++++++|+.+++.+++++++.|++  +.++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~iv~~ss~  141 (237)
T PRK07326         65 DEADVQRAVDAIVAAFGGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR--GGGYIINISSL  141 (237)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH--CCeEEEEECCh
Confidence            999999999999999999999999999876 567788899999999999999999999999999943  35899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|+++|+++.++++.++.|+.+.|+++++|+||.+.|++........     .....+++++++.++..
T Consensus       142 -~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        142 -AGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----DAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             -hhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----hhccCCHHHHHHHHHHH
Confidence             566677778899999999999999999999999999999999999998764422110     01124788898888877


Q ss_pred             hhhcc
Q 016493          290 IRVVK  294 (388)
Q Consensus       290 ~~~~~  294 (388)
                      +..+.
T Consensus       216 l~~~~  220 (237)
T PRK07326        216 LKMPP  220 (237)
T ss_pred             HhCCc
Confidence            65443

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.5e-31  Score=223.02  Aligned_cols=194  Identities=23%  Similarity=0.305  Sum_probs=174.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.+|-+++|||+.+|+|++.|.+|+++|+.|++.+-..++.++.++++                    +.++.+...|++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel--------------------g~~~vf~padvt   65 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL--------------------GGKVVFTPADVT   65 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh--------------------CCceEEeccccC
Confidence            468899999999999999999999999999999999888888877775                    578999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCC-----CcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-----PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PK  199 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~-----~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~  199 (388)
                      ++++++..+.....+|||+|.+|||||+.....     .-...+.|++++.+++|++|+|+.++.....|-++     +.
T Consensus        66 sekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gq  145 (260)
T KOG1199|consen   66 SEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQ  145 (260)
T ss_pred             cHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCc
Confidence            999999999999999999999999999865322     22356789999999999999999999999999754     35


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCc
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS  264 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~  264 (388)
                      +|.|||..|. +.+.+.-+..+|++||.++.+++--++++++..|||+++|.||.++||+....+
T Consensus       146 rgviintasv-aafdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslp  209 (260)
T KOG1199|consen  146 RGVIINTASV-AAFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLP  209 (260)
T ss_pred             ceEEEeecee-eeecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhh
Confidence            6899999998 788888999999999999999999999999999999999999999999976543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2e-30  Score=262.04  Aligned_cols=234  Identities=18%  Similarity=0.279  Sum_probs=185.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.  +++++..++                      ....++.+|
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~----------------------~~~~~~~~D  264 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR----------------------VGGTALALD  264 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH----------------------cCCeEEEEe
Confidence            45789999999999999999999999999999998853  222222211                      123468899


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++.+.+.++++|++|||||+.. ..++.+.+.++|+.++++|+.+++++.++++|.+..+ +.++||++|
T Consensus       265 v~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~g~iv~~S  342 (450)
T PRK08261        265 ITAPDAPARIAEHLAERHGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-DGGRIVGVS  342 (450)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-CCCEEEEEC
Confidence            99999999999999999999999999999876 5778889999999999999999999999999976544 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH--H
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR--T  285 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~--~  285 (388)
                      |. ++..+.++...|+++|+++++|+++++.|+.++||++|+|+||+++|++.......            .++..+  .
T Consensus       343 S~-~~~~g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~------------~~~~~~~~~  409 (450)
T PRK08261        343 SI-SGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFA------------TREAGRRMN  409 (450)
T ss_pred             Ch-hhcCCCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh------------HHHHHhhcC
Confidence            87 56677788899999999999999999999999999999999999999876432110            011111  1


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcC
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  320 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  320 (388)
                      .+.+...|++++..+.||+++...+.++..+..+|
T Consensus       410 ~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g  444 (450)
T PRK08261        410 SLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCG  444 (450)
T ss_pred             CcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            23334556677777778888776555555554444

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=6.9e-30  Score=236.38  Aligned_cols=194  Identities=29%  Similarity=0.477  Sum_probs=169.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      |++++|+++||||+++||++++++|+++|++|++..|+.++ .+...+++..                 .+.++.++.+|
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA-----------------LGGKALAVQGD   63 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-----------------cCCceEEEEcC
Confidence            46688999999999999999999999999999888887653 4444444432                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++.+++.++++++.+.++++|++|||||... ..+..+.+.+.+++.+++|+.+++.+.+.++|.+.+. +.++++++|
T Consensus        64 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~is  141 (248)
T PRK05557         64 VSDAESVERAVDEAKAEFGGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-RSGRIINIS  141 (248)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEc
Confidence            99999999999999999999999999999876 4667788999999999999999999999999999876 467999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |. .+..+.++...|+++|++++.+++.+++++.+.||++++++||+++|++...
T Consensus       142 s~-~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~  195 (248)
T PRK05557        142 SV-VGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA  195 (248)
T ss_pred             cc-ccCcCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence            87 6667778889999999999999999999999999999999999999987643

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-30  Score=238.21  Aligned_cols=178  Identities=21%  Similarity=0.275  Sum_probs=157.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|+++||||++|||++++++|+++|++|++++|+.++.                          .  ...++.+|++|.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~--~~~~~~~D~~~~   53 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------------------------F--PGELFACDLADI   53 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------c--CceEEEeeCCCH
Confidence            579999999999999999999999999999999986530                          0  114578999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++.+.+ ++|++|||||... ..++.+.+.+++++.+++|+.+++.+.+.++|.|+++ +.++||++||. +
T Consensus        54 ~~~~~~~~~~~~~~-~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~  129 (234)
T PRK07577         54 EQTAATLAQINEIH-PVDAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNICSR-A  129 (234)
T ss_pred             HHHHHHHHHHHHhC-CCcEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccc-c
Confidence            99999999988876 6899999999876 4677788999999999999999999999999999977 46899999987 3


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       ..+.+....|++||+++++++++++.|+.+.||+|++|+||+++|++...
T Consensus       130 -~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        130 -IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             -ccCCCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence             34667788999999999999999999999999999999999999998653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=6.9e-30  Score=237.19  Aligned_cols=193  Identities=26%  Similarity=0.416  Sum_probs=172.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+++++..+++..                 .+.++.++.+|++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~   65 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA-----------------AGGKARARQVDVR   65 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            45789999999999999999999999999999999998887776666644                 2345889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++++.++++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.+++|++||.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~ss~  143 (251)
T PRK12826         66 DRAALKAAVAAGVEDFGRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSV  143 (251)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEech
Confidence            999999999999999999999999999876 4677788999999999999999999999999999877 46899999987


Q ss_pred             CCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          210 GSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       210 ~~~~-~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       .+. .+.+....|+.+|++++++++.++.++.+.|++++.++||.+.|+....
T Consensus       144 -~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~  196 (251)
T PRK12826        144 -AGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGN  196 (251)
T ss_pred             -HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhh
Confidence             444 6778888999999999999999999999899999999999999997643

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.3e-29  Score=221.20  Aligned_cols=163  Identities=36%  Similarity=0.582  Sum_probs=150.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC--hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      |+++||||++|||+++|++|+++|+ +|++++|+  .+..+++.+++++                 .+.++.++++|+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~-----------------~~~~~~~~~~D~~~   63 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKA-----------------PGAKITFIECDLSD   63 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHH-----------------TTSEEEEEESETTS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccc-----------------cccccccccccccc
Confidence            7899999999999999999999965 78899999  6777777777764                 35789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++++.++++++|++|||||... .+++.+.+.+++++++++|+.+++.+.++++|    + +.|+||++||. 
T Consensus        64 ~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~-~~g~iv~~sS~-  136 (167)
T PF00106_consen   64 PESIRALIEEVIKRFGPLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----Q-GGGKIVNISSI-  136 (167)
T ss_dssp             HHHHHHHHHHHHHHHSSESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----H-TTEEEEEEEEG-
T ss_pred             ccccccccccccccccccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----c-cccceEEecch-
Confidence            99999999999999999999999999988 78999999999999999999999999999999    2 47999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKES  240 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el  240 (388)
                      ++..+.|+...|++||+|+.+|+++|++|+
T Consensus       137 ~~~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  137 AGVRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             GGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            788999999999999999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=2.4e-30  Score=238.75  Aligned_cols=204  Identities=23%  Similarity=0.217  Sum_probs=157.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++++||||++|||+++|++|+++|  +.|++..|+....      .                   ...++.++++|++|.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~-------------------~~~~~~~~~~Dls~~   55 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F-------------------QHDNVQWHALDVTDE   55 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c-------------------ccCceEEEEecCCCH
Confidence            479999999999999999999986  5666666654310      0                   124688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCC-----CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      ++++++.    +.++++|++|||||....     ..++.+.+.+.+++.+++|+.+++.+++.++|.|+++ +.++|+++
T Consensus        56 ~~~~~~~----~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~i  130 (235)
T PRK09009         56 AEIKQLS----EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVI  130 (235)
T ss_pred             HHHHHHH----HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEE
Confidence            9988754    456899999999998642     2356778889999999999999999999999999876 46789999


Q ss_pred             cCCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          207 DGAGSGG--SSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       207 sS~~~~~--~~~~~~~~Y~aSK~al~~l~~~la~el~~--~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ||..+..  .+.+++..|+++|+++++|+++|+.|+.+  .+|+||+|+||+++|++.........  .  ....+||++
T Consensus       131 ss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~~--~--~~~~~~~~~  206 (235)
T PRK09009        131 SAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQNVP--K--GKLFTPEYV  206 (235)
T ss_pred             eecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhccc--c--CCCCCHHHH
Confidence            8752211  23456779999999999999999999986  69999999999999998653221110  0  112367777


Q ss_pred             HHHHhhhhh
Q 016493          283 ARTLVPRIR  291 (388)
Q Consensus       283 A~~~l~~~~  291 (388)
                      |+.++..+.
T Consensus       207 a~~~~~l~~  215 (235)
T PRK09009        207 AQCLLGIIA  215 (235)
T ss_pred             HHHHHHHHH
Confidence            777765443

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-29  Score=226.07  Aligned_cols=187  Identities=21%  Similarity=0.316  Sum_probs=158.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||++|||+++|++|+++ ++|++.+|+..                                  .++||++|++++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------------------~~~~D~~~~~~~   46 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------------------DVQVDITDPASI   46 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------------------ceEecCCChHHH
Confidence            6999999999999999999999 99999998642                                  267999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      ++++++    ++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++   .++|+++||. .+..
T Consensus        47 ~~~~~~----~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~-~~~~  117 (199)
T PRK07578         47 RALFEK----VGKVDAVVSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGI-LSDE  117 (199)
T ss_pred             HHHHHh----cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEccc-ccCC
Confidence            988765    478999999999865 577888999999999999999999999999999974   4789999987 5677


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      +.++...|++||+++++|+++++.|+ ++||+||+|+||+++|++.....     .+......+|+++|+.++..+.
T Consensus       118 ~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~a~~~~~~~~  188 (199)
T PRK07578        118 PIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGP-----FFPGFEPVPAARVALAYVRSVE  188 (199)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhh-----cCCCCCCCCHHHHHHHHHHHhc
Confidence            88899999999999999999999999 88999999999999998742211     0111223478999887765543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=236.64  Aligned_cols=193  Identities=29%  Similarity=0.425  Sum_probs=169.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.+++..++..                   ..++.++.+|+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~D~   67 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP-------------------GAKVTATVADV   67 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-------------------cCceEEEEccC
Confidence            34688999999999999999999999999999999999877665544331                   12578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||...+..++...+.+++++++++|+.+++.+++.+++.|++.+.+++|+++||
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss  147 (264)
T PRK12829         68 ADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSS  147 (264)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence            99999999999999999999999999998744567778899999999999999999999999999887643378888887


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . ++..+.+....|+.+|++++.+++.++.++.+.++++++++||++.|++..
T Consensus       148 ~-~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~  199 (264)
T PRK12829        148 V-AGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR  199 (264)
T ss_pred             c-ccccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH
Confidence            6 566777888899999999999999999999888999999999999999753

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=232.63  Aligned_cols=216  Identities=19%  Similarity=0.282  Sum_probs=179.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||+++||++++++|+++|++|++++|++++.++..+++..                   ..+..+.+|+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------------------~~~~~~~~D~   63 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-------------------DALRIGGIDL   63 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-------------------cCceEEEeec
Confidence            457899999999999999999999999999999999998877665555432                   2356678999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.+++|++||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS  141 (239)
T PRK12828         64 VDPQAARRAVDEVNRQFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIVNIGA  141 (239)
T ss_pred             CCHHHHHHHHHHHHHHhCCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEEEECc
Confidence            9999999999999999999999999999865 4667778899999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . .+..+.+....|+++|++++.+++.++.++.+.||+++.++||.+.|++.......  ..+..  ..+++++++..+.
T Consensus       142 ~-~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~--~~~~~--~~~~~dva~~~~~  216 (239)
T PRK12828        142 G-AALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD--ADFSR--WVTPEQIAAVIAF  216 (239)
T ss_pred             h-HhccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc--hhhhc--CCCHHHHHHHHHH
Confidence            7 56667778889999999999999999999998999999999999999864322111  11111  1356777776654


Q ss_pred             hh
Q 016493          289 RI  290 (388)
Q Consensus       289 ~~  290 (388)
                      .+
T Consensus       217 ~l  218 (239)
T PRK12828        217 LL  218 (239)
T ss_pred             Hh
Confidence            44

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=3.8e-29  Score=231.15  Aligned_cols=192  Identities=27%  Similarity=0.455  Sum_probs=171.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++.+|+++||||+++||.+++++|+++|++|++++|++++.+....++.+                 .+.++.++.+|++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA-----------------AGGEARVLVFDVS   64 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----------------cCCceEEEEccCC
Confidence            55679999999999999999999999999999999999888776666543                 3457889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |++++.++++++.+.++++|++|||+|... ..+..+.+.++++..++.|+.+++++++.+.|.|.+. +.++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~~ss~  142 (246)
T PRK05653         65 DEAAVRALIEAAVEAFGALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNISSV  142 (246)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECcH
Confidence            999999999999888999999999999876 4677788999999999999999999999999999876 45899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       .+..+.+....|+.+|++++.+++++++++.+.|+++++|+||.+.|++..
T Consensus       143 -~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        143 -SGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             -HhccCCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence             455677778899999999999999999999989999999999999998764

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-29  Score=230.36  Aligned_cols=183  Identities=23%  Similarity=0.327  Sum_probs=158.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++||||++|||+++|++|+++|++|++++|+.++.  .    .+.                .+.++.++++|++|.++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~----------------~~~~~~~~~~D~~~~~~   59 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA----------------AGERLAEVELDLSDAAA   59 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc----------------cCCeEEEEEeccCCHHH
Confidence            4799999999999999999999999999999986531  1    110                23568899999999999


Q ss_pred             HHHHHHH-HHhhc---CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          134 VQKLSNF-AVNEF---GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       134 v~~~~~~-i~~~~---g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +++++++ +.+.+   +++|++|||||...+..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||.
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~  138 (243)
T PRK07023         60 AAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-AERRILHISSG  138 (243)
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-CCCEEEEEeCh
Confidence            9998776 55544   4799999999987645677888999999999999999999999999999876 46899999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       ++..+.+++..|+++|++++++++.++.+ .+.||++++|+||+++|++..
T Consensus       139 -~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        139 -AARNAYAGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence             67788888999999999999999999999 788999999999999999753

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=226.39  Aligned_cols=204  Identities=25%  Similarity=0.294  Sum_probs=166.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||.++|++|+++|++|++++|++++.+++    .+                  ..++.++.+|++|+++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~------------------~~~~~~~~~D~~d~~~   59 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL----QA------------------LPGVHIEKLDMNDPAS   59 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH----Hh------------------ccccceEEcCCCCHHH
Confidence            7899999999999999999999999999999998765432    11                  1246678899999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      ++++++.+.+  +++|++|||||+..+ ..++.+.+.+++++.+++|+.+++.+++.++|.|++.  .++++++||. .+
T Consensus        60 ~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~-~g  134 (225)
T PRK08177         60 LDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQ-LG  134 (225)
T ss_pred             HHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccC-cc
Confidence            9999998854  479999999998642 2456788899999999999999999999999999754  4789999886 33


Q ss_pred             CCC---CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          213 GSS---TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       213 ~~~---~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                      ..+   ......|+++|++++.|+++++.|++++||+||+|+||+++|++.....           ..++++.++.++..
T Consensus       135 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~-----------~~~~~~~~~~~~~~  203 (225)
T PRK08177        135 SVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA-----------PLDVETSVKGLVEQ  203 (225)
T ss_pred             ccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC-----------CCCHHHHHHHHHHH
Confidence            322   2356789999999999999999999999999999999999999864321           13567777777766


Q ss_pred             hhhccc
Q 016493          290 IRVVKG  295 (388)
Q Consensus       290 ~~~~~~  295 (388)
                      +....+
T Consensus       204 ~~~~~~  209 (225)
T PRK08177        204 IEAASG  209 (225)
T ss_pred             HHhCCc
Confidence            655443

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.5e-29  Score=267.36  Aligned_cols=193  Identities=28%  Similarity=0.410  Sum_probs=174.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+.||+++||||+||||+++|++|+++|++|++++|+.+++++..+++..                 . .++.++.+|++
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~-----------------~-~~v~~v~~Dvt  480 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG-----------------P-DRALGVACDVT  480 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc-----------------c-CcEEEEEecCC
Confidence            46789999999999999999999999999999999999887776665532                 1 36888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.+|++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.+|+||++||.
T Consensus       481 d~~~v~~~~~~~~~~~g~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        481 DEAAVQAAFEEAALAFGGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence            999999999999999999999999999876 5788889999999999999999999999999999987545899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc--ccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV--LTDLLLS  262 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v--~T~~~~~  262 (388)
                       .+..+.++...|++||+++++++++++.|+.+.||+||.|+||.|  .|+++..
T Consensus       560 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~  613 (681)
T PRK08324        560 -NAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG  613 (681)
T ss_pred             -cccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc
Confidence             667778889999999999999999999999999999999999999  8887643

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=233.25  Aligned_cols=175  Identities=26%  Similarity=0.336  Sum_probs=151.9

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHHH
Q 016493           57 VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK  136 (388)
Q Consensus        57 lITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~  136 (388)
                      +||||++|||++++++|+++|++|++++|+++++++..+++++                  +.+++++.+|++|++++++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dl~~~~~~~~   62 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG------------------GAPVRTAALDITDEAAVDA   62 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------------------CCceEEEEccCCCHHHHHH
Confidence            6999999999999999999999999999998877665554421                  2467889999999999998


Q ss_pred             HHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 016493          137 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST  216 (388)
Q Consensus       137 ~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~  216 (388)
                      ++++    .+++|++|||+|... ..++.+.+.+++++++++|+.+++++++  .+.|.   +.++||++||. ++..+.
T Consensus        63 ~~~~----~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~---~~g~iv~~ss~-~~~~~~  131 (230)
T PRK07041         63 FFAE----AGPFDHVVITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA---PGGSLTFVSGF-AAVRPS  131 (230)
T ss_pred             HHHh----cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc---CCeEEEEECch-hhcCCC
Confidence            8875    478999999999876 4677788999999999999999999999  45554   35899999988 677788


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          217 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       217 ~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ++...|+++|+++++++++++.|+.+  |+||+++||+++|++...
T Consensus       132 ~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        132 ASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHh
Confidence            88999999999999999999999975  999999999999998643

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.2e-29  Score=230.99  Aligned_cols=185  Identities=20%  Similarity=0.249  Sum_probs=153.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||++++++|+++|++|++.+|+.+ .++.+.++++.                 .+.++.++++|+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   65 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-----------------AGGRASAVGADL   65 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-----------------cCCceEEEEcCC
Confidence            467899999999999999999999999999999999754 45555444433                 234678899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|++|||||... ..   ..   +++..+++|+.+++++++.+.|.|.+   .+++|++||
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS  135 (248)
T PRK07806         66 TDEESVAALMDTAREEFGGLDALVLNASGGM-ES---GM---DEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTS  135 (248)
T ss_pred             CCHHHHHHHHHHHHHhCCCCcEEEECCCCCC-CC---CC---CcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeC
Confidence            9999999999999999999999999998743 11   11   24578899999999999999999963   478999988


Q ss_pred             CCCCC----CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGG----SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~----~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      ..+..    .+.+.+..|++||++++.++++++.|+++.||+||+|+||.+.|++..
T Consensus       136 ~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~  192 (248)
T PRK07806        136 HQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA  192 (248)
T ss_pred             chhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh
Confidence            53322    233556789999999999999999999999999999999999998653

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.8e-28  Score=225.46  Aligned_cols=198  Identities=19%  Similarity=0.184  Sum_probs=150.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||+++||||++|||+++|++|+++|++|++++|+..+..+   .. .                 . .....+.+|+
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~-----------------~-~~~~~~~~D~   67 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-D-----------------E-SPNEWIKWEC   67 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-c-----------------c-CCCeEEEeeC
Confidence            45688999999999999999999999999999999998632111   00 0                 0 1125678999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEe
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNM  206 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~i  206 (388)
                      +|.+++++       .++++|++|||||...    ..+.+.+++++++++|+.+++++++.++|.|++++  +++.+++.
T Consensus        68 ~~~~~~~~-------~~~~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~  136 (245)
T PRK12367         68 GKEESLDK-------QLASLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVN  136 (245)
T ss_pred             CCHHHHHH-------hcCCCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEE
Confidence            99987753       4578999999999743    24568899999999999999999999999998641  23334444


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHH---HHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQ---ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~---~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      +|. ++..+ +..+.|++||+|+..+.   +.++.|+.+.||+|++++||+++|++...            ..++|+++|
T Consensus       137 ss~-a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~------------~~~~~~~vA  202 (245)
T PRK12367        137 TSE-AEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPI------------GIMSADFVA  202 (245)
T ss_pred             ecc-cccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCcc------------CCCCHHHHH
Confidence            454 34433 45678999999986543   45555667889999999999999987311            124799999


Q ss_pred             HHHhhhhhhc
Q 016493          284 RTLVPRIRVV  293 (388)
Q Consensus       284 ~~~l~~~~~~  293 (388)
                      +.++..+...
T Consensus       203 ~~i~~~~~~~  212 (245)
T PRK12367        203 KQILDQANLG  212 (245)
T ss_pred             HHHHHHHhcC
Confidence            9999887643

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.96  E-value=1.1e-27  Score=223.00  Aligned_cols=188  Identities=27%  Similarity=0.436  Sum_probs=168.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+++.+++..                 .+.++..+.+|++|.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   63 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATD-----------------AGGSVIYLVADVTKED   63 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEECCCCCHH
Confidence            57899999999999999999999999999999998887776665543                 2356889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+.++++|++|||||... ..+..+.+++++++++++|+.+++.+++.++|.|++. +.+++|++||. ++
T Consensus        64 ~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~-~~  140 (255)
T TIGR01963        64 EIADMIAAAAAEFGGLDILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASA-HG  140 (255)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcch-hh
Confidence            999999999998999999999999865 4566778889999999999999999999999999876 46799999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ..+.+....|+.+|+++++++++++.++.+.+|+|+.++||.+.||+.
T Consensus       141 ~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~  188 (255)
T TIGR01963       141 LVASPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV  188 (255)
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence            677788899999999999999999999988899999999999999874

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=1.3e-27  Score=220.84  Aligned_cols=205  Identities=25%  Similarity=0.350  Sum_probs=176.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++++|+++||||+||||+++|++|+++|+ +|++++|+.+++++                        .+.++.++.+|
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------------------~~~~~~~~~~D   57 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------------------LGPRVVPLQLD   57 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------------------cCCceEEEEec
Confidence            567899999999999999999999999999 99999999776532                        02468889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++.    ++++|++|||||......++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++++++|
T Consensus        58 ~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~s  132 (238)
T PRK08264         58 VTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-GGGAIVNVL  132 (238)
T ss_pred             CCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEc
Confidence            9999999887764    46899999999984335678888999999999999999999999999999877 478999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. .+..+.++...|+.+|++++++++.++.++.+.||++++++||.++|++......         ...+++++++.++
T Consensus       133 S~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~---------~~~~~~~~a~~~~  202 (238)
T PRK08264        133 SV-LSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA---------PKASPADVARQIL  202 (238)
T ss_pred             Ch-hhccCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc---------CCCCHHHHHHHHH
Confidence            87 5677788889999999999999999999999999999999999999998543211         1347899999998


Q ss_pred             hhhhh
Q 016493          288 PRIRV  292 (388)
Q Consensus       288 ~~~~~  292 (388)
                      ..+..
T Consensus       203 ~~~~~  207 (238)
T PRK08264        203 DALEA  207 (238)
T ss_pred             HHHhC
Confidence            87753

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.4e-28  Score=225.20  Aligned_cols=183  Identities=21%  Similarity=0.325  Sum_probs=160.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||++++++|+++|++|++++|+.++++++.+....                 .+.++.++++|++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   64 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR-----------------RGLALRVEKLDLTDAI   64 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcceEEEeeCCCHH
Confidence            57999999999999999999999999999999998776655444332                 2345888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++      +++|++|||||... .+++.+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||. .+
T Consensus        65 ~~~~~~~------~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~-~~  135 (257)
T PRK09291         65 DRAQAAE------WDVDVLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSM-AG  135 (257)
T ss_pred             HHHHHhc------CCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcCh-hh
Confidence            8877643      37999999999876 57888999999999999999999999999999998874 5899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      ..+.++...|++||++++++++.++.++.+.||++++|+||++.|++..
T Consensus       136 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        136 LITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             ccCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            6667788899999999999999999999999999999999999998753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=3.7e-28  Score=224.74  Aligned_cols=192  Identities=32%  Similarity=0.482  Sum_probs=166.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++|+++||||+++||++++++|+++|++|++..|+.++ .+...+.+..                 .+.++.++.+|++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   66 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA-----------------LGRRAQAVQADVT   66 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-----------------cCCceEEEECCcC
Confidence            457899999999999999999999999998887765443 4444333332                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++++++.++|.+++. +.+++|++||.
T Consensus        67 ~~~~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~  144 (249)
T PRK12825         67 DKAALEAAVAAAVERFGRIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSV  144 (249)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcc
Confidence            999999999999888899999999999865 5677788999999999999999999999999999887 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       .+..+.++...|+.+|++++++++.+++++.+.||+++.++||.+.|++...
T Consensus       145 -~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~  196 (249)
T PRK12825        145 -AGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA  196 (249)
T ss_pred             -ccCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc
Confidence             5566777888999999999999999999999899999999999999998654

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=6.8e-27  Score=216.82  Aligned_cols=191  Identities=26%  Similarity=0.349  Sum_probs=163.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..++|+++||||++|||++++++|+++|++|++++|+. +..++..+++.+.                .+..+.++.+|+
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   66 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL----------------RPGSAAALQADL   66 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh----------------cCCceEEEEcCC
Confidence            35679999999999999999999999999999999864 4455444444321                124578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+.++++|++|||||... ..++.+.+.++++.++++|+.+++++++++.|.|.++  .++++++++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~  143 (249)
T PRK09135         67 LDPDALPELVAACVAAFGRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITD  143 (249)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeC
Confidence            9999999999999999999999999999866 4567777889999999999999999999999999765  478888877


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . ....+.++...|++||++++.+++.++.++.+ +|++++++||++.||...
T Consensus       144 ~-~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        144 I-HAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             h-hhcCCCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence            5 55667788899999999999999999999966 699999999999999753

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=2.9e-27  Score=220.67  Aligned_cols=215  Identities=26%  Similarity=0.318  Sum_probs=177.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||+||||+++++.|+++|++|++++|+.++++.+    .+                   ..++.+++|++|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~-------------------~~~~~~~~D~~~~~~   59 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS-------------------LGFTGILLDLDDPES   59 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh-------------------CCCeEEEeecCCHHH
Confidence            7899999999999999999999999999999998776433    11                   135678999999999


Q ss_pred             HHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          134 VQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       134 v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      ++++++.+.+.. +++|.+|||+|... ..++.+.+.+++++.+++|+.|++++++.++|.|++. +.++||++||. ++
T Consensus        60 ~~~~~~~i~~~~~~~~~~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~-~~  136 (256)
T PRK08017         60 VERAADEVIALTDNRLYGLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSV-MG  136 (256)
T ss_pred             HHHHHHHHHHhcCCCCeEEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCc-cc
Confidence            999999887644 68999999999866 4677888999999999999999999999999999887 46899999987 66


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch------hhhhhhhhccCHHHHHHHH
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ------NKQMFNIICELPETVARTL  286 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~pe~vA~~~  286 (388)
                      ..+.+....|++||++++.++++++.++.+.|+++++|+||.+.|++........      ...........|+++++.+
T Consensus       137 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  216 (256)
T PRK08017        137 LISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKL  216 (256)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence            7788888999999999999999999999999999999999999999765422110      0111111235789999988


Q ss_pred             hhhhhhcc
Q 016493          287 VPRIRVVK  294 (388)
Q Consensus       287 l~~~~~~~  294 (388)
                      ...+..+.
T Consensus       217 ~~~~~~~~  224 (256)
T PRK08017        217 RHALESPK  224 (256)
T ss_pred             HHHHhCCC
Confidence            87775443

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.3e-27  Score=218.99  Aligned_cols=217  Identities=17%  Similarity=0.231  Sum_probs=171.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||.++++.|+++|++|++++|++++++++.+++..                  ..+++++++|+
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dl   62 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK------------------YGNIHYVVGDV   62 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------------------cCCeEEEECCC
Confidence            357899999999999999999999999999999999998877665555432                  13578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++++.+.++++|.+|+|+|... ..+..  +.+++++++++|+.+++.+.+.++|.|++   .+++|++||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss  136 (238)
T PRK05786         63 SSTESARNVIEKAAKVLNAIDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSS  136 (238)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEec
Confidence            9999999999999888899999999999754 23332  34889999999999999999999999864   478999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      ......+.+....|++||+++..++++++.++.+.||++++|+||++.|++........... ......+++++++.++.
T Consensus       137 ~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~~~~-~~~~~~~~~~va~~~~~  215 (238)
T PRK05786        137 MSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKKLRK-LGDDMAPPEDFAKVIIW  215 (238)
T ss_pred             chhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhhhcc-ccCCCCCHHHHHHHHHH
Confidence            63333456777889999999999999999999999999999999999998642211000000 01112367777777665


Q ss_pred             hh
Q 016493          289 RI  290 (388)
Q Consensus       289 ~~  290 (388)
                      .+
T Consensus       216 ~~  217 (238)
T PRK05786        216 LL  217 (238)
T ss_pred             Hh
Confidence            44

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.95  E-value=1.6e-26  Score=213.08  Aligned_cols=186  Identities=32%  Similarity=0.534  Sum_probs=162.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +||||++++||.++|++|+++|++|++++|+. +.+++..+++.+                 .+.+++++.+|++|++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~~~   63 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA-----------------YGVKALGVVCDVSDREDV   63 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-----------------cCCceEEEEecCCCHHHH
Confidence            58999999999999999999999999999875 444444444432                 235688999999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++.+.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.+.+.+.+. +.++++++||. ++..
T Consensus        64 ~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~-~~~~  140 (239)
T TIGR01830        64 KAVVEEIEEELGPIDILVNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-RSGRIINISSV-VGLM  140 (239)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEECCc-cccC
Confidence            9999999999999999999999865 4566778889999999999999999999999999765 46799999987 5667


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      +.+....|+++|++++.+++.++.++...|++++.++||.++|++..
T Consensus       141 g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~  187 (239)
T TIGR01830       141 GNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD  187 (239)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh
Confidence            77888999999999999999999999989999999999999998653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.95  E-value=2.4e-27  Score=209.57  Aligned_cols=246  Identities=16%  Similarity=0.174  Sum_probs=206.5

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..++||++||+|-.  +.|+..||+.|.++|+++..+..++ ++++..+++.+..                 .....++|
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~-----------------~s~~v~~c   63 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL-----------------GSDLVLPC   63 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc-----------------cCCeEEec
Confidence            35799999999964  7999999999999999999999887 6666666665532                 23567999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      |+++.++++++++++.+++|++|+|||+-|..+.   .+.+.+.+.|.+...+++..++...+.|++.|.|..   +|+|
T Consensus        64 DV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSi  140 (259)
T COG0623          64 DVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSI  140 (259)
T ss_pred             CCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcE
Confidence            9999999999999999999999999999998762   356778999999999999999999999999999984   6899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      +.++=- .+....|.+...+.+|+++++-+|.||.+++++|||||.|+-|+|+|--......     +..+   -...-.
T Consensus       141 ltLtYl-gs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~-----f~~~---l~~~e~  211 (259)
T COG0623         141 LTLTYL-GSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGD-----FRKM---LKENEA  211 (259)
T ss_pred             EEEEec-cceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcccc-----HHHH---HHHHHh
Confidence            998754 5667788888999999999999999999999999999999999999953322111     1111   123344


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +.+++|-.++++++++..||+||-..-+||....+|+++..
T Consensus       212 ~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         212 NAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             hCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCcee
Confidence            67788888899999999999999999999999998888743

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=8.1e-26  Score=206.99  Aligned_cols=197  Identities=20%  Similarity=0.300  Sum_probs=157.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||++++++|+++|++|++++|+.++++++    ..                   ..+.++.+|+++.++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~-------------------~~~~~~~~D~~~~~~   58 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QA-------------------LGAEALALDVADPAS   58 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hh-------------------ccceEEEecCCCHHH
Confidence            6899999999999999999999999999999997765432    21                   124578999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      ++++++++..  +++|++|||+|.... ..+..+.+.+++++.+++|+.+++.++++++|+|.+.  .+++++++|.. +
T Consensus        59 v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~-~  133 (222)
T PRK06953         59 VAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRM-G  133 (222)
T ss_pred             HHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcc-c
Confidence            9998877643  479999999998631 2455677899999999999999999999999999764  57899998863 3


Q ss_pred             CCCCCC---chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          213 GSSTPL---TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       213 ~~~~~~---~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                      ..+...   ...|+++|++++++++.++.++.  +++||+|+||+++|++..+..           ...+++.+..+.+.
T Consensus       134 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~~-----------~~~~~~~~~~~~~~  200 (222)
T PRK06953        134 SIGDATGTTGWLYRASKAALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQA-----------ALDPAQSVAGMRRV  200 (222)
T ss_pred             ccccccCCCccccHHhHHHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCCC-----------CCCHHHHHHHHHHH
Confidence            333222   23699999999999999999874  699999999999999864321           12577777777765


Q ss_pred             hh
Q 016493          290 IR  291 (388)
Q Consensus       290 ~~  291 (388)
                      +.
T Consensus       201 ~~  202 (222)
T PRK06953        201 IA  202 (222)
T ss_pred             HH
Confidence            54

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.9e-25  Score=204.36  Aligned_cols=210  Identities=24%  Similarity=0.362  Sum_probs=168.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||+++||++++++|+++ ++|++++|+.++.++..++.                     ..++++++|++|++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~   60 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL---------------------PGATPFPVDLTDPE   60 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh---------------------ccceEEecCCCCHH
Confidence            589999999999999999999999 99999999987655433221                     24678899999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++.+    +++|++||++|... ..++.+.+.+++++++++|+.+++.+++.+++.|+++  .+++|++||. ++
T Consensus        61 ~~~~~~~~~----~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~-~~  132 (227)
T PRK08219         61 AIAAAVEQL----GRLDVLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSG-AG  132 (227)
T ss_pred             HHHHHHHhc----CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcch-Hh
Confidence            998877653    57999999999866 4667788999999999999999999999999999876  4789999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      ..+.++...|+.+|.+++++++.++.++... |++++|+||.+.|++..................+++++|+.++..+..
T Consensus       133 ~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~  211 (227)
T PRK08219        133 LRANPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDA  211 (227)
T ss_pred             cCcCCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcC
Confidence            6777888999999999999999999998876 999999999999986543211111111111124688898888876654


Q ss_pred             c
Q 016493          293 V  293 (388)
Q Consensus       293 ~  293 (388)
                      +
T Consensus       212 ~  212 (227)
T PRK08219        212 P  212 (227)
T ss_pred             C
Confidence            3

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=4.3e-25  Score=218.11  Aligned_cols=197  Identities=20%  Similarity=0.213  Sum_probs=152.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..   .+                 ....+..+.+|+
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~-----------------~~~~v~~v~~Dv  233 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NG-----------------EDLPVKTLHWQV  233 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hh-----------------cCCCeEEEEeeC
Confidence            4678999999999999999999999999999999999877654321   11                 112466789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC---CcEEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK---GGHIFN  205 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~---~g~Iv~  205 (388)
                      +|++++.+.       ++++|++|||||+..    ..+.+.+++++++++|+.|++.++++++|.|++++.   ++.+++
T Consensus       234 sd~~~v~~~-------l~~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn  302 (406)
T PRK07424        234 GQEAALAEL-------LEKVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVN  302 (406)
T ss_pred             CCHHHHHHH-------hCCCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence            999887553       358999999999853    246788999999999999999999999999987632   345677


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +|+.  . ...+..+.|++||+|+.+|++ ++++.  .++.|..++||+++|++..            ...++||++|+.
T Consensus       303 ~Ssa--~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~------------~~~~spe~vA~~  364 (406)
T PRK07424        303 TSEA--E-VNPAFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP------------IGVMSADWVAKQ  364 (406)
T ss_pred             Eccc--c-ccCCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc------------CCCCCHHHHHHH
Confidence            7643  3 233456789999999999984 55443  3577788899999998631            112489999999


Q ss_pred             Hhhhhhhcc
Q 016493          286 LVPRIRVVK  294 (388)
Q Consensus       286 ~l~~~~~~~  294 (388)
                      ++..+...+
T Consensus       365 il~~i~~~~  373 (406)
T PRK07424        365 ILKLAKRDF  373 (406)
T ss_pred             HHHHHHCCC
Confidence            998886433

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.93  E-value=1.7e-26  Score=214.46  Aligned_cols=203  Identities=19%  Similarity=0.194  Sum_probs=155.5

Q ss_pred             HHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCc
Q 016493           69 LAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSI  148 (388)
Q Consensus        69 iA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~i  148 (388)
                      +|++|+++|++|++++|+.++.+     +                       ..++++|++|.++++++++++.   +++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-----------------------~~~~~~Dl~~~~~v~~~~~~~~---~~i   49 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L-----------------------DGFIQADLGDPASIDAAVAALP---GRI   49 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h-----------------------hHhhcccCCCHHHHHHHHHHhc---CCC
Confidence            47899999999999999876531     0                       1246899999999999998774   689


Q ss_pred             cEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------------
Q 016493          149 DIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG---------------  213 (388)
Q Consensus       149 D~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~---------------  213 (388)
                      |+||||||... .        +++++++++|+.+++.+++.++|.|++   .|+||++||..+..               
T Consensus        50 D~li~nAG~~~-~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~  117 (241)
T PRK12428         50 DALFNIAGVPG-T--------APVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATA  117 (241)
T ss_pred             eEEEECCCCCC-C--------CCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccc
Confidence            99999999743 1        247899999999999999999999963   38999999873321               


Q ss_pred             -----------CCCCCchhhHHHHHHHHHHHHHHH-HHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          214 -----------SSTPLTAVYGSTKCGLRQLQASLF-KESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       214 -----------~~~~~~~~Y~aSK~al~~l~~~la-~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                                 .+.++...|++||+|+++++++++ .|++++||+||+|+||.++|++..+.........       .+.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~-------~~~  190 (241)
T PRK12428        118 SFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQER-------VDS  190 (241)
T ss_pred             hHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHh-------hhh
Confidence                       255677899999999999999999 9999999999999999999998654211100000       000


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                       ...++.++..|++++..+.|++++...+.++..+..||++
T Consensus       191 -~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        191 -DAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGL  230 (241)
T ss_pred             -cccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCch
Confidence             0123455667888888888888887766667666666665

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=1e-25  Score=199.13  Aligned_cols=191  Identities=19%  Similarity=0.213  Sum_probs=155.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|++|+||+|+|||..+++.+.+++-.....+++....+  .+.+                +...+........|++..
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L----------------~v~~gd~~v~~~g~~~e~   66 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGL----------------KVAYGDDFVHVVGDITEE   66 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccce----------------EEEecCCcceechHHHHH
Confidence            3578999999999999999998888865544443332221  0111                011223445566788887


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcC--CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL--QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~--~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      .-..++.+..++++|+.|++|||||...+.....  ..+.++|++.++.|+++++.+.+.++|.+++++-.+.+||+||.
T Consensus        67 ~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~  146 (253)
T KOG1204|consen   67 QLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSL  146 (253)
T ss_pred             HHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecch
Confidence            7888888989999999999999999977544444  78889999999999999999999999999988657899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       +...|.+++++||.+|+|.++|++.||.|-. .+|+|.++.||.++|+|...
T Consensus       147 -aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~  197 (253)
T KOG1204|consen  147 -AAVRPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVC  197 (253)
T ss_pred             -hhhccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHH
Confidence             7889999999999999999999999999977 79999999999999998654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.91  E-value=3.2e-23  Score=239.52  Aligned_cols=199  Identities=17%  Similarity=0.061  Sum_probs=156.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChH--------------HHHHHH-HHHHHHHhhhhh-----hcC-
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSE--------------SVRMTV-TELEENLKEGMM-----AAG-  109 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~--------------~l~~~~-~~l~~~~~~~~~-----~~~-  109 (388)
                      +|+++|||||++|||+++|++|+++ |++|++++|+..              .++... +.+++. .++..     ... 
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~-g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQAS-GEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhc-ccccccchhhhccc
Confidence            5899999999999999999999998 699999999821              111100 000000 00000     000 


Q ss_pred             ----CC------CcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhh
Q 016493          110 ----GS------SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN  179 (388)
Q Consensus       110 ----~~------~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN  179 (388)
                          ..      ......+.++.++.||++|.++++++++++.++ ++||+||||||+.. ...+.+.+.++|++++++|
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHH
Confidence                00      000113567889999999999999999999877 68999999999977 5788999999999999999


Q ss_pred             chHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          180 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       180 ~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +.|.+++++++.+.+.     ++||++||. ++..+.++...|+++|.+++++++.++.++.  +++|++|+||+++|+|
T Consensus      2153 v~G~~~Ll~al~~~~~-----~~IV~~SSv-ag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI-----KLLALFSSA-AGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHHHHHHHHhCC-----CeEEEEech-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCc
Confidence            9999999998876543     469999998 6788889999999999999999999999885  4899999999999998


Q ss_pred             cc
Q 016493          260 LL  261 (388)
Q Consensus       260 ~~  261 (388)
                      ..
T Consensus      2225 ~~ 2226 (2582)
T TIGR02813      2225 VN 2226 (2582)
T ss_pred             cc
Confidence            63

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=2.4e-22  Score=175.40  Aligned_cols=178  Identities=22%  Similarity=0.208  Sum_probs=145.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |+++||||++|||++++++|+++|+ .|++.+|+++..+.....+.+. .+             .+.++.++.+|+++++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~D~~~~~   66 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAEL-EA-------------LGAEVTVVACDVADRA   66 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHH-Hh-------------cCCeEEEEECCCCCHH
Confidence            5799999999999999999999997 6888888866544332211111 10             2457888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.+.+.+.+    . +.++++++||. ++
T Consensus        67 ~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~ii~~ss~-~~  139 (180)
T smart00822       67 ALAAALAAIPARLGPLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTRD----L-PLDFFVLFSSV-AG  139 (180)
T ss_pred             HHHHHHHHHHHHcCCeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhcc----C-CcceEEEEccH-HH
Confidence            999999999888999999999999865 46678889999999999999999999998732    2 45789999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  256 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~  256 (388)
                      ..+.++...|+++|.++..+++.++    +.|+++.+++||+++
T Consensus       140 ~~~~~~~~~y~~sk~~~~~~~~~~~----~~~~~~~~~~~g~~~  179 (180)
T smart00822      140 VLGNPGQANYAAANAFLDALAAHRR----ARGLPATSINWGAWA  179 (180)
T ss_pred             hcCCCCchhhHHHHHHHHHHHHHHH----hcCCceEEEeecccc
Confidence            6777888999999999999887654    457889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.89  E-value=3.3e-22  Score=178.94  Aligned_cols=195  Identities=19%  Similarity=0.230  Sum_probs=166.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-----eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-----RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-----~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++|||++||||.++|++|++...     ++++++|+.++.+++...+++.+++             ...++.++.+|+
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~-------------~~i~~~yvlvD~   70 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPK-------------STIEVTYVLVDV   70 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCC-------------ceeEEEEEEEeh
Confidence            8999999999999999999998753     5788999999999999999988764             357899999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCC-------------C-------------cCCCCHHHHHHHHHhhchH
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-------------P-------------LLQFTNEEIEQIVSTNLVG  182 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~-------------~-------------~~~~~~~~~~~~~~vN~~g  182 (388)
                      ++..++.++..++.++|.++|.+..|||+.+..+             |             ....+.|++..+|+.|++|
T Consensus        71 sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFG  150 (341)
T KOG1478|consen   71 SNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFG  150 (341)
T ss_pred             hhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccc
Confidence            9999999999999999999999999999865211             0             1134668889999999999


Q ss_pred             HHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC--------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc
Q 016493          183 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM  254 (388)
Q Consensus       183 ~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~--------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~  254 (388)
                      ++.+.+.+.|.+-.+. ...+|-+||..+.....        .+...|+.||.++.-+.-++-+.+.+.|+.-++++||.
T Consensus       151 hfyli~~l~pll~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~  229 (341)
T KOG1478|consen  151 HFYLIRELEPLLCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGI  229 (341)
T ss_pred             hhhhHhhhhhHhhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCce
Confidence            9999999999998773 44899999874332221        35568999999999999999999999999999999999


Q ss_pred             cccccccc
Q 016493          255 VLTDLLLS  262 (388)
Q Consensus       255 v~T~~~~~  262 (388)
                      .-|.+...
T Consensus       230 ~tt~~~~~  237 (341)
T KOG1478|consen  230 FTTNSFSE  237 (341)
T ss_pred             eecchhhh
Confidence            98887643

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.85  E-value=5.6e-20  Score=178.20  Aligned_cols=168  Identities=16%  Similarity=0.198  Sum_probs=133.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++||+++||||+|+||++++++|+++|  ++|++.+|+..+..++.+++                   ...++.++.+|+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-------------------~~~~~~~v~~Dl   62 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF-------------------PAPCLRFFIGDV   62 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh-------------------CCCcEEEEEccC
Confidence            468999999999999999999999987  78999999866543322221                   113578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++.++++       ++|++||+||...  .+..+.++   ++.+++|+.++.++++++.+.     +.+++|++||
T Consensus        63 ~d~~~l~~~~~-------~iD~Vih~Ag~~~--~~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS  125 (324)
T TIGR03589        63 RDKERLTRALR-------GVDYVVHAAALKQ--VPAAEYNP---FECIRTNINGAQNVIDAAIDN-----GVKRVVALST  125 (324)
T ss_pred             CCHHHHHHHHh-------cCCEEEECcccCC--CchhhcCH---HHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeC
Confidence            99998887664       5899999999753  22233333   468999999999999998752     3468999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      . ...   .+...|++||++.+.++++++.+....|+++++++||.+..|
T Consensus       126 ~-~~~---~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       126 D-KAA---NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             C-CCC---CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            6 332   234679999999999999998888888999999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=8e-20  Score=185.17  Aligned_cols=216  Identities=15%  Similarity=0.125  Sum_probs=152.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ..+||+++||||+||||++++++|+++|++|++++|+.++++++.+++.+.....   . +    .....++.++.+|++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~---~-G----a~~~~~v~iV~gDLt  148 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDV---E-G----TQPVEKLEIVECDLE  148 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhcccc---c-c----ccccCceEEEEecCC
Confidence            4578999999999999999999999999999999999998877766554311000   0 0    001235889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.+++++.       ++++|+||||+|...  .     ...++...+++|+.+..++++++.+.     +.++||++||.
T Consensus       149 D~esI~~a-------LggiDiVVn~AG~~~--~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSi  209 (576)
T PLN03209        149 KPDQIGPA-------LGNASVVICCIGASE--K-----EVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSL  209 (576)
T ss_pred             CHHHHHHH-------hcCCCEEEEcccccc--c-----cccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccc
Confidence            99887653       357999999999743  1     11246788999999999998887543     35799999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-h---hhhhhhhhccCHHHHHHH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-Q---NKQMFNIICELPETVART  285 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~---~~~~~~~~~~~pe~vA~~  285 (388)
                      +....+.+.. .|. +|.++..+.+.+..++...||++|.|+||.+.|++....... .   ...........++++|+.
T Consensus       210 ga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~v  287 (576)
T PLN03209        210 GTNKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAEL  287 (576)
T ss_pred             hhcccCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHH
Confidence            4322333222 244 888898899999999999999999999999998854311000 0   000000112367888888


Q ss_pred             Hhhhhhhcc
Q 016493          286 LVPRIRVVK  294 (388)
Q Consensus       286 ~l~~~~~~~  294 (388)
                      ++..+..++
T Consensus       288 VvfLasd~~  296 (576)
T PLN03209        288 MACMAKNRR  296 (576)
T ss_pred             HHHHHcCch
Confidence            887665443

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=1.8e-19  Score=158.11  Aligned_cols=143  Identities=19%  Similarity=0.227  Sum_probs=118.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||.++|+.|+++|++|++++|+.+.+++..+++.+                 .+.+..++.+|+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl   74 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN-----------------LGGEALFVSYDM   74 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccC
Confidence            567899999999999999999999999999999999998877776666643                 234567889999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC------CCcE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP------KGGH  202 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------~~g~  202 (388)
                      ++.++++++++++.+.+|++|++|||||+.....++.+.+.++ ++  .+|+.+.+..++.+.+.|++++      ..||
T Consensus        75 ~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (169)
T PRK06720         75 EKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPI  151 (169)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCce
Confidence            9999999999999999999999999999876445555555555 44  7778888999999999988763      3578


Q ss_pred             EEEecCCCC
Q 016493          203 IFNMDGAGS  211 (388)
Q Consensus       203 Iv~isS~~~  211 (388)
                      +..+|+.++
T Consensus       152 ~~~~~~~~~  160 (169)
T PRK06720        152 FGIIGTKGQ  160 (169)
T ss_pred             eeEeccccc
Confidence            888877643

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.83  E-value=4.5e-19  Score=171.38  Aligned_cols=189  Identities=17%  Similarity=0.203  Sum_probs=139.5

Q ss_pred             cCCCCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCChHHHH------------HHHHHHHHHHhhhhhhcCCCCcc
Q 016493           49 CKAGPRNVVITGSTRGLGKA--LAREFLLSGDRVVVASRSSESVR------------MTVTELEENLKEGMMAAGGSSKK  114 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~a--iA~~La~~G~~Vil~~R~~~~l~------------~~~~~l~~~~~~~~~~~~~~~~~  114 (388)
                      ..-.||++||||+++|||.+  +|+.| ++|++|+++++..++.+            ...+.+++               
T Consensus        37 ~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~---------------  100 (398)
T PRK13656         37 IANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA---------------  100 (398)
T ss_pred             cCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh---------------
Confidence            33568999999999999999  89999 99999998886433222            12222211               


Q ss_pred             cccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC----------------c--------------
Q 016493          115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----------------L--------------  164 (388)
Q Consensus       115 ~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~----------------~--------------  164 (388)
                        .+..+..+.||+++.++++++++++.+++|++|+||||+|......|                +              
T Consensus       101 --~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~  178 (398)
T PRK13656        101 --AGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIE  178 (398)
T ss_pred             --cCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeE
Confidence              23457789999999999999999999999999999999998632110                1              


Q ss_pred             ---CCCCHHHHHHHHHhhchHH-----HHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc--hhhHHHHHHHHHHHH
Q 016493          165 ---LQFTNEEIEQIVSTNLVGS-----ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQA  234 (388)
Q Consensus       165 ---~~~~~~~~~~~~~vN~~g~-----~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSK~al~~l~~  234 (388)
                         ...+.++++.++++  +|.     +.-.+...+.|.   .+++++..|.. ......|.+  ..-+.+|++|+.-++
T Consensus       179 ~s~~~~~~~ei~~Tv~v--Mggedw~~Wi~al~~a~lla---~g~~~va~TY~-G~~~t~p~Y~~g~mG~AKa~LE~~~r  252 (398)
T PRK13656        179 VTVEPATEEEIADTVKV--MGGEDWELWIDALDEAGVLA---EGAKTVAYSYI-GPELTHPIYWDGTIGKAKKDLDRTAL  252 (398)
T ss_pred             EEEeeCCHHHHHHHHHh--hccchHHHHHHHHHhccccc---CCcEEEEEecC-CcceeecccCCchHHHHHHHHHHHHH
Confidence               12344455544443  333     222344455554   36899999887 445555555  467999999999999


Q ss_pred             HHHHHhCCCCeEEEEEecCcccccccc
Q 016493          235 SLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       235 ~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      .|+.+|++.|||+|++.+|++.|.-..
T Consensus       253 ~La~~L~~~giran~i~~g~~~T~Ass  279 (398)
T PRK13656        253 ALNEKLAAKGGDAYVSVLKAVVTQASS  279 (398)
T ss_pred             HHHHHhhhcCCEEEEEecCcccchhhh
Confidence            999999999999999999999997543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.82  E-value=2.6e-19  Score=159.14  Aligned_cols=174  Identities=23%  Similarity=0.279  Sum_probs=134.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   .+.++..+++++                 .+.++.++.||++|
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~-----------------~g~~v~~~~~Dv~d   64 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES-----------------AGARVEYVQCDVTD   64 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH-----------------TT-EEEEEE--TTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh-----------------CCCceeeeccCccC
Confidence            689999999999999999999995 899999993   234455666655                 46789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++++.+++++||.+||+||... ..++.+.++++++.++...+.|..++.+.+.+    . ....+|..||. 
T Consensus        65 ~~~v~~~~~~~~~~~~~i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~-~l~~~i~~SSi-  137 (181)
T PF08659_consen   65 PEAVAAALAQLRQRFGPIDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----R-PLDFFILFSSI-  137 (181)
T ss_dssp             HHHHHHHHHTSHTTSS-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----T-TTSEEEEEEEH-
T ss_pred             HHHHHHHHHHHHhccCCcceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----C-CCCeEEEECCh-
Confidence            99999999999999999999999999977 68899999999999999999999999887654    2 45678889988 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  256 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~  256 (388)
                      ++..+.++...|+++.+.++.|++..+.    .|..+.+|+-|..+
T Consensus       138 s~~~G~~gq~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  138 SSLLGGPGQSAYAAANAFLDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHTT-TTBHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             hHhccCcchHhHHHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence            6788999999999999999988886554    36678888887653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.81  E-value=9.9e-19  Score=171.07  Aligned_cols=177  Identities=16%  Similarity=0.073  Sum_probs=136.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++||+++||||+|+||.+++++|+++|++|++++|+..........+.                  ...++.++.+|++|
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~~   63 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN------------------LAKKIEDHFGDIRD   63 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh------------------hcCCceEEEccCCC
Confidence            367999999999999999999999999999999998765433322221                  11356778999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .+++.++++..     ++|++||+||...     ...+.++....+++|+.+++++++++.+    .+..+++|++||..
T Consensus        64 ~~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~iv~~SS~~  129 (349)
T TIGR02622        64 AAKLRKAIAEF-----KPEIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRA----IGSVKAVVNVTSDK  129 (349)
T ss_pred             HHHHHHHHhhc-----CCCEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHh----cCCCCEEEEEechh
Confidence            99998888754     6899999999632     2344566778899999999999998743    21246899998852


Q ss_pred             CCC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccccc
Q 016493          211 SGG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKR----SKVGVHTASPGMVLTDL  259 (388)
Q Consensus       211 ~~~-----------~~~~~~~~Y~aSK~al~~l~~~la~el~~----~gI~vn~v~PG~v~T~~  259 (388)
                      ...           .+..+...|+.||.+.+.+++.++.++.+    .|++++++.|+.+..|-
T Consensus       130 vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       130 CYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             hhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            110           01234568999999999999999988855    48999999999998763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.79  E-value=7.1e-18  Score=163.19  Aligned_cols=175  Identities=13%  Similarity=0.164  Sum_probs=132.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|+++||||+|+||++++++|+++|++|++++|+.++.++.. .+.....              ...++.++.+|++|.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~D~~d~   68 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTD-HLLALDG--------------AKERLKLFKADLLDE   68 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHH-HHHhccC--------------CCCceEEEeCCCCCc
Confidence            5799999999999999999999999999999999876654332 1111000              124688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       ++|++|||||...     ...+.+.+++.+++|+.+++++++++.+.+    +.++||++||...
T Consensus        69 ~~~~~~~~-------~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~----~~~~iv~~SS~~~  132 (325)
T PLN02989         69 GSFELAID-------GCETVFHTASPVA-----ITVKTDPQVELINPAVNGTINVLRTCTKVS----SVKRVILTSSMAA  132 (325)
T ss_pred             hHHHHHHc-------CCCEEEEeCCCCC-----CCCCCChHHHHHHHHHHHHHHHHHHHHHcC----CceEEEEecchhh
Confidence            98887765       5899999999642     123345678899999999999999987753    2468999998632


Q ss_pred             CCCCC-------------C--------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          212 GGSST-------------P--------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       212 ~~~~~-------------~--------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ...+.             +        ....|+.||.+.+.+++.++++.   |+.++.+.|+.+..|..
T Consensus       133 ~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~  199 (325)
T PLN02989        133 VLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPIL  199 (325)
T ss_pred             eecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCC
Confidence            11110             0        02469999999999888877654   79999999999988754

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.78  E-value=9.2e-18  Score=158.65  Aligned_cols=218  Identities=14%  Similarity=0.147  Sum_probs=155.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+++|+||||||.||..++++|+++||+|..+.|++++.+. .+.+++...              .+.+...+..|++|+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-~~~L~~l~~--------------a~~~l~l~~aDL~d~   69 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-TEHLRKLEG--------------AKERLKLFKADLLDE   69 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-HHHHHhccc--------------CcccceEEecccccc
Confidence            67999999999999999999999999999999999987433 222322111              345689999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       ++|+|+|.|....    +...+  .-.++++.++.|+.++++++...    +.-.|||++||.++
T Consensus        70 ~sf~~ai~-------gcdgVfH~Asp~~----~~~~~--~e~~li~pav~Gt~nVL~ac~~~----~sVkrvV~TSS~aA  132 (327)
T KOG1502|consen   70 GSFDKAID-------GCDGVFHTASPVD----FDLED--PEKELIDPAVKGTKNVLEACKKT----KSVKRVVYTSSTAA  132 (327)
T ss_pred             chHHHHHh-------CCCEEEEeCccCC----CCCCC--cHHhhhhHHHHHHHHHHHHHhcc----CCcceEEEeccHHH
Confidence            99999887       6899999997543    11111  22478999999999999988553    23468999999744


Q ss_pred             CCCCCCC-----------c----------hhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccCccchhh
Q 016493          212 GGSSTPL-----------T----------AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNK  269 (388)
Q Consensus       212 ~~~~~~~-----------~----------~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~~~~~~~  269 (388)
                      .....+.           +          ..|+.||.    +++..|.+++. .|+...+|+||.|-.|...........
T Consensus       133 v~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~----lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~  208 (327)
T KOG1502|consen  133 VRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKT----LAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLN  208 (327)
T ss_pred             hccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHH----HHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHH
Confidence            3322111           1          24888887    56666666664 369999999999999987663322111


Q ss_pred             hhhhhh-------------ccCHHHHHHHHhhhhhhccccccceeeccCHHH
Q 016493          270 QMFNII-------------CELPETVARTLVPRIRVVKGSGKAINYLTPPRI  308 (388)
Q Consensus       270 ~~~~~~-------------~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~  308 (388)
                      ....++             ..+-+++|++.+..++.|...+   +|+|....
T Consensus       209 ~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~G---Ryic~~~~  257 (327)
T KOG1502|consen  209 ALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAKG---RYICVGEV  257 (327)
T ss_pred             HHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccCc---eEEEecCc
Confidence            111111             1467899999999998877664   67765533

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.76  E-value=8.9e-17  Score=155.38  Aligned_cols=209  Identities=14%  Similarity=0.146  Sum_probs=144.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ..||+++||||+|+||.+++++|+++|++|+++.|+.++.+.... +.+...              ...++.++.+|++|
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~Dl~~   67 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEH-LLALDG--------------AKERLKLFKADLLE   67 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHH-HHhccC--------------CCCceEEEecCCCC
Confidence            468999999999999999999999999999999998765443322 111000              12467889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++       ++|++||+||... ..   .  .+..++++++|+.++.++++++...    .+.++||++||..
T Consensus        68 ~~~~~~~~~-------~~d~vih~A~~~~-~~---~--~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~  130 (322)
T PLN02986         68 ESSFEQAIE-------GCDAVFHTASPVF-FT---V--KDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTA  130 (322)
T ss_pred             cchHHHHHh-------CCCEEEEeCCCcC-CC---C--CCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchh
Confidence            998887775       5899999998642 11   1  1223568899999999999886432    1246899999873


Q ss_pred             CCCCCC----------------C-----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh
Q 016493          211 SGGSST----------------P-----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK  269 (388)
Q Consensus       211 ~~~~~~----------------~-----~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  269 (388)
                      ....+.                |     ....|+.||.+.+.+++.+.++.   |+++++++|+.+.+|...........
T Consensus       131 ~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~  207 (322)
T PLN02986        131 AVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVE  207 (322)
T ss_pred             heecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHH
Confidence            211110                0     13569999998888888776654   79999999999998864321100000


Q ss_pred             ---hh-hh--------hhccCHHHHHHHHhhhhhhcc
Q 016493          270 ---QM-FN--------IICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       270 ---~~-~~--------~~~~~pe~vA~~~l~~~~~~~  294 (388)
                         .+ ..        ......+++|+.++..+..+.
T Consensus       208 ~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~  244 (322)
T PLN02986        208 LIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPS  244 (322)
T ss_pred             HHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCcc
Confidence               00 00        012357899999988776654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.75  E-value=1.1e-16  Score=153.37  Aligned_cols=215  Identities=10%  Similarity=0.042  Sum_probs=144.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +-++|+++||||+|+||++++++|+++|++|+++.|+.++  ..+...++..                 .+.++.++.+|
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   65 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC-----------------EEERLKVFDVD   65 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc-----------------CCCceEEEEec
Confidence            4467899999999999999999999999999999996432  2211121110                 12457889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.+++.+++.       .+|.++|.++...      +.+ +++++++++|+.|++++++++.+.+    +.++||++|
T Consensus        66 l~d~~~~~~~l~-------~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~----~v~riV~~S  127 (297)
T PLN02583         66 PLDYHSILDALK-------GCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTD----TIEKVVFTS  127 (297)
T ss_pred             CCCHHHHHHHHc-------CCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEec
Confidence            999988865543       5789988765421      111 2467899999999999999987753    236899999


Q ss_pred             CCCCCCCC--CC-----------C--------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc
Q 016493          208 GAGSGGSS--TP-----------L--------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI  266 (388)
Q Consensus       208 S~~~~~~~--~~-----------~--------~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~  266 (388)
                      |..+....  .+           .        ...|+.||...+.++..++++   .|+++++|+|+.|..|........
T Consensus       128 S~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~  204 (297)
T PLN02583        128 SLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPY  204 (297)
T ss_pred             chHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhh
Confidence            87322111  00           0        015999999888887766554   389999999999988854321100


Q ss_pred             hhh--hh---hhhhccCHHHHHHHHhhhhhhccccccceeeccC
Q 016493          267 QNK--QM---FNIICELPETVARTLVPRIRVVKGSGKAINYLTP  305 (388)
Q Consensus       267 ~~~--~~---~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~  305 (388)
                      ...  ..   ........+++|+..+..+..+...+   .|++.
T Consensus       205 ~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~~~~---r~~~~  245 (297)
T PLN02583        205 LKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYG---RYLCF  245 (297)
T ss_pred             hcCCcccCcccCcceEEHHHHHHHHHHHhcCcccCC---cEEEe
Confidence            000  00   00112467999999998887554333   45544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=2.2e-17  Score=160.85  Aligned_cols=183  Identities=13%  Similarity=0.056  Sum_probs=130.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +.++|++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+.+..             ...+.++.++.+|+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl   69 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP-------------HPNKARMKLHYGDL   69 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc-------------ccccCceEEEEecC
Confidence            567899999999999999999999999999999998754321 1111111100             00124588999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++.++++.+     ++|+|||+||....     ....+..+..+++|+.++.++++++.+.+.++++.-++|++||
T Consensus        70 ~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss  139 (340)
T PLN02653         70 SDASSLRRWLDDI-----KPDEVYNLAAQSHV-----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS  139 (340)
T ss_pred             CCHHHHHHHHHHc-----CCCEEEECCcccch-----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence            9999999888765     59999999997431     1223445778899999999999999887654322236888876


Q ss_pred             CC-CCCC--------CCCCchhhHHHHHHHHHHHHHHHHHhCC---CCeEEEEEecCcc
Q 016493          209 AG-SGGS--------STPLTAVYGSTKCGLRQLQASLFKESKR---SKVGVHTASPGMV  255 (388)
Q Consensus       209 ~~-~~~~--------~~~~~~~Y~aSK~al~~l~~~la~el~~---~gI~vn~v~PG~v  255 (388)
                      .. .+..        +..+...|+.||.+.+.+++.++.++.-   .++.+|.+.|+..
T Consensus       140 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~  198 (340)
T PLN02653        140 SEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG  198 (340)
T ss_pred             HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence            41 1111        1123567999999999999999888742   2445566667643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.73  E-value=3.4e-16  Score=146.08  Aligned_cols=207  Identities=15%  Similarity=0.142  Sum_probs=133.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ....++++++||||+|+||++++++|+++|++|+++.|+.++.++...                     ...++.++++|
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------------------~~~~~~~~~~D   70 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---------------------QDPSLQIVRAD   70 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---------------------cCCceEEEEee
Confidence            345678999999999999999999999999999999999876432210                     11357889999


Q ss_pred             CCCH-HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          128 VCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       128 ls~~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      ++|. +++.   +.+.   .++|++|+|+|......+.         ..+++|+.++.++++++.    +. +.++||++
T Consensus        71 l~d~~~~l~---~~~~---~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~----~~-~~~~iV~i  130 (251)
T PLN00141         71 VTEGSDKLV---EAIG---DDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR----KA-GVTRFILV  130 (251)
T ss_pred             CCCCHHHHH---HHhh---cCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH----Hc-CCCEEEEE
Confidence            9983 3322   2220   2699999999874311111         124688888888888763    33 45799999


Q ss_pred             cCCCCC--CCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          207 DGAGSG--GSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       207 sS~~~~--~~~~~~~~~Y~aSK~al~~l~~~la~e--l~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ||.+..  ..+.+....|...|.....+...+..|  +...|++++.|+||.+.++...................+++++
T Consensus       131 SS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dv  210 (251)
T PLN00141        131 SSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQV  210 (251)
T ss_pred             ccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHH
Confidence            987311  112233455777665444333223222  4667999999999999876432211100010001123578999


Q ss_pred             HHHHhhhhhhccc
Q 016493          283 ARTLVPRIRVVKG  295 (388)
Q Consensus       283 A~~~l~~~~~~~~  295 (388)
                      |+.++..+..++.
T Consensus       211 A~~~~~~~~~~~~  223 (251)
T PLN00141        211 AEVAVEALLCPES  223 (251)
T ss_pred             HHHHHHHhcChhh
Confidence            9998887765553

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.71  E-value=8.5e-16  Score=150.57  Aligned_cols=178  Identities=13%  Similarity=0.099  Sum_probs=130.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .-.++++|||||+|+||.+++++|+++|++|++++|+.++.+....++.                  ...++.++.+|++
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~   68 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK------------------EGDRLRLFRADLQ   68 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc------------------cCCeEEEEECCCC
Confidence            4467899999999999999999999999999999998766544333221                  1246888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHH--HHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      |.+++.++++       ++|++||+||...........+++.+  ..++++|+.++.++++++.+..    ..+++|++|
T Consensus        69 ~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~~S  137 (353)
T PLN02896         69 EEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVFTS  137 (353)
T ss_pred             CHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence            9998877664       58999999997542111122333333  4577888899999999876542    246899999


Q ss_pred             CCCCCCCC----------------C---------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          208 GAGSGGSS----------------T---------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       208 S~~~~~~~----------------~---------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      |.. .+..                .         +....|+.||.+.+.+++.++++.   |+++..+.|+.|-.|..
T Consensus       138 S~~-vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        138 SIS-TLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFL  211 (353)
T ss_pred             chh-hccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCc
Confidence            852 2210                0         112379999999999988777655   79999999988887743

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.70  E-value=8.3e-16  Score=154.96  Aligned_cols=184  Identities=13%  Similarity=0.124  Sum_probs=131.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH---H----HHHH------HHHHHHHHhhhhhhcCCCCccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE---S----VRMT------VTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~---~----l~~~------~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      -.+++|++|||||+|+||++++++|+++|++|++++|...   +    .++.      ...+... .+            
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~------------  109 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRW-KE------------  109 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHH-HH------------
Confidence            4567899999999999999999999999999999875321   1    0000      0111100 00            


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  195 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  195 (388)
                      ..+.++.++.+|++|.++++++++..     ++|+|||+|+...  .+....++++++..+++|+.|++++++++...  
T Consensus       110 ~~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~--  180 (442)
T PLN02572        110 VSGKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF--  180 (442)
T ss_pred             hhCCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh--
Confidence            01235888999999999998888764     6999999997632  34445566777888999999999999987553  


Q ss_pred             cCCCCcEEEEecCCCC-CCC----------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEec
Q 016493          196 DQPKGGHIFNMDGAGS-GGS----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASP  252 (388)
Q Consensus       196 ~~~~~g~Iv~isS~~~-~~~----------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~P  252 (388)
                        +...++|++||... +..                      +..+...|+.||.+.+.+++..+..+   |+.+..+.|
T Consensus       181 --gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~  255 (442)
T PLN02572        181 --APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQ  255 (442)
T ss_pred             --CCCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEec
Confidence              11247999988621 110                      11123579999999888887766554   799999999


Q ss_pred             Ccccccc
Q 016493          253 GMVLTDL  259 (388)
Q Consensus       253 G~v~T~~  259 (388)
                      +.+-.|.
T Consensus       256 ~~vyGp~  262 (442)
T PLN02572        256 GVVYGVR  262 (442)
T ss_pred             ccccCCC
Confidence            9987764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.70  E-value=6.9e-16  Score=151.05  Aligned_cols=207  Identities=11%  Similarity=0.054  Sum_probs=142.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ..|++|||||+|.||.+++++|+++|++|++++|+.++.+.....+..  ..             ...++.++.+|++|.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~-------------~~~~~~~v~~Dl~d~   68 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDL--PG-------------ATTRLTLWKADLAVE   68 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhc--cC-------------CCCceEEEEecCCCh
Confidence            568999999999999999999999999999999987665443221110  00             113578899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +.++++++       .+|++||+|+...    ....  +..+..+++|+.++.++++++.+..    ..+++|++||...
T Consensus        69 ~~~~~~~~-------~~d~ViH~A~~~~----~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~----~~~r~v~~SS~~~  131 (351)
T PLN02650         69 GSFDDAIR-------GCTGVFHVATPMD----FESK--DPENEVIKPTVNGMLSIMKACAKAK----TVRRIVFTSSAGT  131 (351)
T ss_pred             hhHHHHHh-------CCCEEEEeCCCCC----CCCC--CchhhhhhHHHHHHHHHHHHHHhcC----CceEEEEecchhh
Confidence            88877665       4899999998632    1111  2236788999999999999987642    1358999998622


Q ss_pred             CCC-----C-C---------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-hhh
Q 016493          212 GGS-----S-T---------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNK  269 (388)
Q Consensus       212 ~~~-----~-~---------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~  269 (388)
                      ...     + .               .+...|+.||.+.+.+++.+++++   |++++.+.|+.+.+|........ ...
T Consensus       132 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~~~~~~~~~~~  208 (351)
T PLN02650        132 VNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFISTSMPPSLIT  208 (351)
T ss_pred             cccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCCCCCCCccHHH
Confidence            110     1 0               012379999999999998887764   79999999999988853221100 000


Q ss_pred             hh-------------hhhhccCHHHHHHHHhhhhhhc
Q 016493          270 QM-------------FNIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       270 ~~-------------~~~~~~~pe~vA~~~l~~~~~~  293 (388)
                      ..             ...-....+++++.++..+..+
T Consensus       209 ~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        209 ALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             HHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCc
Confidence            00             0011235789999888777543

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.70  E-value=1e-15  Score=149.02  Aligned_cols=173  Identities=14%  Similarity=0.175  Sum_probs=127.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ..++|+++||||+|+||++++++|+++|++|++++|+.+....... +.. ..              ...++.++.+|++
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~-~~--------------~~~~~~~~~~Dl~   69 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRA-LQ--------------ELGDLKIFGADLT   69 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHh-cC--------------CCCceEEEEcCCC
Confidence            4568999999999999999999999999999989888654332211 111 00              0125788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.+++.++++       ++|++||+|+...    ..  ..+.....+++|+.++.++++++.+.    .+.+++|++||.
T Consensus        70 d~~~~~~~~~-------~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~----~~~~~~v~~SS~  132 (338)
T PLN00198         70 DEESFEAPIA-------GCDLVFHVATPVN----FA--SEDPENDMIKPAIQGVHNVLKACAKA----KSVKRVILTSSA  132 (338)
T ss_pred             ChHHHHHHHh-------cCCEEEEeCCCCc----cC--CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeecc
Confidence            9988877654       5899999998532    11  12234567899999999999987653    124689999986


Q ss_pred             CCCCC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          210 GSGGS------------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       210 ~~~~~------------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      . ...                        ..++...|+.||.+.+.+++.++.++   |+.+..+.|+.|-.|-
T Consensus       133 ~-~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        133 A-AVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPS  202 (338)
T ss_pred             e-eeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCC
Confidence            3 221                        01234569999999999988877653   7999999999998874

>PLN02240 UDP-glucose 4-epimerase

Probab=99.69  E-value=1.4e-15  Score=148.73  Aligned_cols=175  Identities=17%  Similarity=0.132  Sum_probs=124.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||+|+||.+++++|+++|++|++++|......+...++......             .+.++.++.+|+
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~   67 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGD-------------LGDNLVFHKVDL   67 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcc-------------cCccceEEecCc
Confidence            4678899999999999999999999999999999987543332222222221100             124578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|++++.++++..     ++|++||+||... .    ..+.++.++.+++|+.++.++++++    ++. +..++|++||
T Consensus        68 ~~~~~l~~~~~~~-----~~d~vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss  132 (352)
T PLN02240         68 RDKEALEKVFAST-----RFDAVIHFAGLKA-V----GESVAKPLLYYDNNLVGTINLLEVM----AKH-GCKKLVFSSS  132 (352)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEEccccCC-c----cccccCHHHHHHHHHHHHHHHHHHH----HHc-CCCEEEEEcc
Confidence            9999998887652     7999999999743 1    1133456789999999999998765    333 3468999988


Q ss_pred             CCCCCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc
Q 016493          209 AGSGGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM  254 (388)
Q Consensus       209 ~~~~~~-----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~  254 (388)
                      .. .+.           +..+...|+.||.+.+.+++.++.+.  .++.+..+.|+.
T Consensus       133 ~~-vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~  186 (352)
T PLN02240        133 AT-VYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFN  186 (352)
T ss_pred             HH-HhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecC
Confidence            52 211           11235689999999999998887552  246666666543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.69  E-value=8e-16  Score=150.68  Aligned_cols=176  Identities=15%  Similarity=0.175  Sum_probs=125.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEE-EEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vi-l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |++|||||+|+||.+++++|+++|++++ +.+|.... ... ..+....               ...++.++.+|++|.+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~---------------~~~~~~~~~~Dl~d~~   64 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVA---------------QSERFAFEKVDICDRA   64 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcc---------------cCCceEEEECCCcChH
Confidence            6899999999999999999999998755 44544221 111 1111100               1235778899999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc---C-CCCcEEEEecC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD---Q-PKGGHIFNMDG  208 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~-~~~g~Iv~isS  208 (388)
                      +++++++..     ++|+|||+||...     .+.+.++++..+++|+.++.++++++.+.|..   . .+..++|++||
T Consensus        65 ~~~~~~~~~-----~~D~Vih~A~~~~-----~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS  134 (355)
T PRK10217         65 ELARVFTEH-----QPDCVMHLAAESH-----VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIST  134 (355)
T ss_pred             HHHHHHhhc-----CCCEEEECCcccC-----cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecc
Confidence            998887752     6999999999743     12344567899999999999999999876431   1 12358999988


Q ss_pred             CCC-CC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          209 AGS-GG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       209 ~~~-~~-----------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ... +.           .+..+...|+.||.+.+.+++.+++++   ++++..+.|+.+-.|-
T Consensus       135 ~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~  194 (355)
T PRK10217        135 DEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPY  194 (355)
T ss_pred             hhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCC
Confidence            521 10           122345689999999999999988776   5777778887776553

>PLN02214 cinnamoyl-CoA reductase

Probab=99.68  E-value=2.1e-15  Score=147.26  Aligned_cols=201  Identities=17%  Similarity=0.120  Sum_probs=140.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT-VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.... ..++..                 ...++.++.+|++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   70 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-----------------GKERLILCKADLQ   70 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-----------------CCCcEEEEecCcC
Confidence            4688999999999999999999999999999999987653221 111110                 1235788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.+++.++++       ++|++||+||...          ++.+..+++|+.++.++++++...     +.+++|++||.
T Consensus        71 d~~~~~~~~~-------~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~  128 (342)
T PLN02214         71 DYEALKAAID-------GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSI  128 (342)
T ss_pred             ChHHHHHHHh-------cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccc
Confidence            9998887765       5899999998632          134678999999999999987542     24589999985


Q ss_pred             CCCCC-C--CC-----------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh
Q 016493          210 GSGGS-S--TP-----------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK  269 (388)
Q Consensus       210 ~~~~~-~--~~-----------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  269 (388)
                      .+.+. +  .+                 ....|+.||.+.+.+++..+.+.   |+++..++|+.|-.|...........
T Consensus       129 ~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~  205 (342)
T PLN02214        129 GAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLY  205 (342)
T ss_pred             eeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHH
Confidence            22110 0  00                 23469999999999988777664   79999999999987743211000000


Q ss_pred             h----hh---------hhhccCHHHHHHHHhhhhhhc
Q 016493          270 Q----MF---------NIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       270 ~----~~---------~~~~~~pe~vA~~~l~~~~~~  293 (388)
                      .    ..         ..-....+++|+.++..+..+
T Consensus       206 ~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~  242 (342)
T PLN02214        206 HVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAP  242 (342)
T ss_pred             HHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCc
Confidence            0    00         001135789999988877654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.68  E-value=8.5e-16  Score=149.95  Aligned_cols=176  Identities=16%  Similarity=0.106  Sum_probs=120.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |++|||||+|+||.+++++|+++|++|++++|+.+... +....+.+...            ...+.++.++.+|++|.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Dl~d~~   68 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPH------------NVNKARMKLHYGDLTDSS   68 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccc------------cccccceeEEEeccCCHH
Confidence            68999999999999999999999999999999864211 11111111000            001245888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC-
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~-  211 (388)
                      ++.++++.+     ++|++||+|+.... .    ...+.-+..+++|+.|+.++++++.+.-.+  +..++|++||... 
T Consensus        69 ~l~~~~~~~-----~~d~ViH~Aa~~~~-~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~SS~~vy  136 (343)
T TIGR01472        69 NLRRIIDEI-----KPTEIYNLAAQSHV-K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQASTSELY  136 (343)
T ss_pred             HHHHHHHhC-----CCCEEEECCccccc-c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEeccHHhh
Confidence            998888764     58999999997541 1    122233567789999999999998764111  1247899988521 


Q ss_pred             CC---------CCCCCchhhHHHHHHHHHHHHHHHHHhCCC---CeEEEEEecC
Q 016493          212 GG---------SSTPLTAVYGSTKCGLRQLQASLFKESKRS---KVGVHTASPG  253 (388)
Q Consensus       212 ~~---------~~~~~~~~Y~aSK~al~~l~~~la~el~~~---gI~vn~v~PG  253 (388)
                      +.         .+..+...|+.||.+.+.+++.+++++.-.   ++.+|...|+
T Consensus       137 g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  190 (343)
T TIGR01472       137 GKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR  190 (343)
T ss_pred             CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence            11         112245689999999999999998876321   2333455555

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.66  E-value=3.9e-15  Score=143.62  Aligned_cols=207  Identities=14%  Similarity=0.129  Sum_probs=140.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||+|+||++++++|+++|++|++++|+.++..... .+.....              ...++.++++|++|+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~Dl~~~   67 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDG--------------AKERLHLFKANLLEE   67 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccC--------------CCCceEEEeccccCc
Confidence            5789999999999999999999999999999999865433221 1111000              124688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++.++++       ++|++||+|+... .   ....  ..+..+++|+.++.++++++....    +..++|++||.++
T Consensus        68 ~~~~~~~~-------~~d~Vih~A~~~~-~---~~~~--~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~v~~SS~~~  130 (322)
T PLN02662         68 GSFDSVVD-------GCEGVFHTASPFY-H---DVTD--PQAELIDPAVKGTLNVLRSCAKVP----SVKRVVVTSSMAA  130 (322)
T ss_pred             chHHHHHc-------CCCEEEEeCCccc-C---CCCC--hHHHHHHHHHHHHHHHHHHHHhCC----CCCEEEEccCHHH
Confidence            88877665       5899999998642 1   1111  225788999999999999875421    2358999998631


Q ss_pred             -CCCCC---------------CC-----chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh
Q 016493          212 -GGSST---------------PL-----TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ  270 (388)
Q Consensus       212 -~~~~~---------------~~-----~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  270 (388)
                       .+.+.               |.     ...|+.+|.+.+.+++.+.++.   |++++.++|+.+.+|............
T Consensus       131 ~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~~~~~~~  207 (322)
T PLN02662        131 VAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTLNTSAEA  207 (322)
T ss_pred             hcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCCCchHHH
Confidence             11110               10     1369999998888887666543   799999999999988643211000000


Q ss_pred             hh------------hhhccCHHHHHHHHhhhhhhc
Q 016493          271 MF------------NIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       271 ~~------------~~~~~~pe~vA~~~l~~~~~~  293 (388)
                      ..            ..-....+++|+.++..+..+
T Consensus       208 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        208 ILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             HHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc
Confidence            00            011235789999988777654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.65  E-value=8.5e-15  Score=145.88  Aligned_cols=174  Identities=20%  Similarity=0.249  Sum_probs=146.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++||+++||||+|.||.++++++++.+. ++++.+|++.++.+...++++.++               ..++.++-+|+
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~---------------~~~~~~~igdV  311 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP---------------ELKLRFYIGDV  311 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC---------------CcceEEEeccc
Confidence            57899999999999999999999999995 799999999999999999887643               26789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      .|.+.++++++..     ++|+++|.|..-.  -|+.+..+   .+.+++|++|+.++++++...     +-.++|.+|+
T Consensus       312 rD~~~~~~~~~~~-----kvd~VfHAAA~KH--VPl~E~nP---~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iST  376 (588)
T COG1086         312 RDRDRVERAMEGH-----KVDIVFHAAALKH--VPLVEYNP---EEAIKTNVLGTENVAEAAIKN-----GVKKFVLIST  376 (588)
T ss_pred             ccHHHHHHHHhcC-----CCceEEEhhhhcc--CcchhcCH---HHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEec
Confidence            9999999988754     7999999999854  45555544   678899999999999999765     3457999986


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  257 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T  257 (388)
                      -    ....+...|++||...+.++.+++....+.+-++.+|.=|.|-.
T Consensus       377 D----KAV~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         377 D----KAVNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             C----cccCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence            5    33445678999999999999999987776578899999888854

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.63  E-value=1.2e-14  Score=139.37  Aligned_cols=170  Identities=13%  Similarity=0.133  Sum_probs=123.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHH-HHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +++||||+|+||.+++++|+++|  ++|++.+|..... .+..+.+.                  ...++.++.+|++|+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~~~   62 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE------------------DNPRYRFVKGDIGDR   62 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc------------------cCCCcEEEEcCCcCH
Confidence            48999999999999999999987  7898887643211 11111111                  113577889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++.++++..     ++|++||+|+...     .+.+.+..+..+++|+.++.++++++...+.    ..+++++||...
T Consensus        63 ~~~~~~~~~~-----~~d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v  128 (317)
T TIGR01181        63 ELVSRLFTEH-----QPDAVVHFAAESH-----VDRSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEV  128 (317)
T ss_pred             HHHHHHHhhc-----CCCEEEEcccccC-----chhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccce
Confidence            9998887753     6999999998743     1223455678899999999999988765432    347999988521


Q ss_pred             -CCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          212 -GGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       212 -~~~----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                       +..          +..+...|+.+|.+.+.+++.++.+.   ++++..+.|+.+-.|.
T Consensus       129 ~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       129 YGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPY  184 (317)
T ss_pred             eCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence             100          11234579999999999999887765   6889999999887653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.61  E-value=2.8e-14  Score=139.62  Aligned_cols=182  Identities=15%  Similarity=0.126  Sum_probs=128.2

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +-.+.+++|+|+||||+|.||..++++|+++|++|++++|...........+......            ....++.++.
T Consensus         8 ~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~   75 (348)
T PRK15181          8 RTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE------------EQWSRFIFIQ   75 (348)
T ss_pred             hhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc------------ccCCceEEEE
Confidence            4456778899999999999999999999999999999998654322222222111000            0113578899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|+.|.+++.++++       .+|++||.|+....  +.   ..++....+++|+.|+.++++.+..    . +..++|+
T Consensus        76 ~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~--~~---~~~~~~~~~~~Nv~gt~nll~~~~~----~-~~~~~v~  138 (348)
T PRK15181         76 GDIRKFTDCQKACK-------NVDYVLHQAALGSV--PR---SLKDPIATNSANIDGFLNMLTAARD----A-HVSSFTY  138 (348)
T ss_pred             ccCCCHHHHHHHhh-------CCCEEEECccccCc--hh---hhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEE
Confidence            99999888776664       48999999997431  11   1223346799999999999887643    2 3458999


Q ss_pred             ecCCCC-CCCC---------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          206 MDGAGS-GGSS---------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       206 isS~~~-~~~~---------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +||... +..+         ..+...|+.||.+.+.+++..+.+.   |+++..+.|+.+-.|-
T Consensus       139 ~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        139 AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             eechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcC
Confidence            987621 1111         1134579999999998887776553   7899999999887763

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.61  E-value=3.3e-14  Score=138.13  Aligned_cols=168  Identities=17%  Similarity=0.152  Sum_probs=117.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||++++++|+++|++|++++|...........+.+.                .+.++.++.+|++|.+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~~~~   65 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALL   65 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh----------------cCCCceEEEccCCCHHHH
Confidence            5899999999999999999999999999886543322222222210                123467789999999988


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .++++.     .++|++||+||... ...    ..+.....+++|+.++.++++++    ++. +.+++|++||.. .+.
T Consensus        66 ~~~~~~-----~~~d~vvh~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss~~-~yg  129 (338)
T PRK10675         66 TEILHD-----HAIDTVIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAM----RAA-NVKNLIFSSSAT-VYG  129 (338)
T ss_pred             HHHHhc-----CCCCEEEECCcccc-ccc----hhhCHHHHHHHHHHHHHHHHHHH----HHc-CCCEEEEeccHH-hhC
Confidence            887763     36999999999753 111    12334567899999999988764    333 346899998862 211


Q ss_pred             C-----------C-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 016493          215 S-----------T-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  256 (388)
Q Consensus       215 ~-----------~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~  256 (388)
                      .           . .+...|+.+|.+.+.+++.++++..  ++++..+.|+.+.
T Consensus       130 ~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~  181 (338)
T PRK10675        130 DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPV  181 (338)
T ss_pred             CCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeec
Confidence            0           0 2357899999999999999876643  4666666654443

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.60  E-value=9.5e-15  Score=137.00  Aligned_cols=172  Identities=20%  Similarity=0.245  Sum_probs=124.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      ||||||+|-||.+++++|++.+ .++++.+|++.++-++..++++..++.           .....+.++.+|+.|.+.+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~-----------~v~~~~~~vigDvrd~~~l   69 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDP-----------KVRFEIVPVIGDVRDKERL   69 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--T-----------TCEEEEE--CTSCCHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhccccc-----------CcccccCceeecccCHHHH
Confidence            7999999999999999999999 579999999999998888886543320           0012345678899999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .+++++.     ++|+++|.|..-.  -|+.+..+   .+.+++|++|+.++++++..+     +-.++|++|+--    
T Consensus        70 ~~~~~~~-----~pdiVfHaAA~Kh--Vpl~E~~p---~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDK----  130 (293)
T PF02719_consen   70 NRIFEEY-----KPDIVFHAAALKH--VPLMEDNP---FEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDK----  130 (293)
T ss_dssp             HHHTT-------T-SEEEE--------HHHHCCCH---HHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECG----
T ss_pred             HHHHhhc-----CCCEEEEChhcCC--CChHHhCH---HHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccc----
Confidence            8888754     7999999999854  34555444   677999999999999998764     356899998752    


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccc
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  257 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T  257 (388)
                      ...+...|++||...+.++.+.+....+.+.++.+|.=|.|--
T Consensus       131 Av~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlg  173 (293)
T PF02719_consen  131 AVNPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLG  173 (293)
T ss_dssp             CSS--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETT
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceec
Confidence            2335689999999999999998888877788999999998843

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.59  E-value=3.8e-14  Score=138.67  Aligned_cols=172  Identities=12%  Similarity=0.172  Sum_probs=120.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDR-VVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +++||||+|+||.+++++|+++|++ |+..++..  ...+... .+.                  .+.++.++.+|++|.
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~Dl~d~   62 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS------------------DSERYVFEHADICDR   62 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc------------------cCCceEEEEecCCCH
Confidence            5899999999999999999999986 55455432  1111111 110                  124577889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC----CCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ----PKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~~~g~Iv~is  207 (388)
                      +++++++++.     ++|++||+||... .    +.+.+..+..+++|+.|+.++++++.++|++.    ++..++|++|
T Consensus        63 ~~~~~~~~~~-----~~d~vih~A~~~~-~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~S  132 (352)
T PRK10084         63 AELDRIFAQH-----QPDAVMHLAAESH-V----DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHIS  132 (352)
T ss_pred             HHHHHHHHhc-----CCCEEEECCcccC-C----cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEec
Confidence            9998888752     7999999999743 1    11122346789999999999999998876532    1234799998


Q ss_pred             CCC-CCCC-------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          208 GAG-SGGS-------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       208 S~~-~~~~-------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      |.. .+..                   +..+...|+.||.+.+.+++.+++++   |+.+..+.|+.+-.|
T Consensus       133 S~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp  200 (352)
T PRK10084        133 TDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGP  200 (352)
T ss_pred             chhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCC
Confidence            852 1110                   11234689999999999999988776   456666777666554

>PLN02686 cinnamoyl-CoA reductase

Probab=99.59  E-value=6.1e-14  Score=138.27  Aligned_cols=181  Identities=14%  Similarity=0.070  Sum_probs=125.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ....++|++|||||+|+||.+++++|+++|++|+++.|+.++.+.+ +++... .+          .......+.++.+|
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~-~~----------~~~~~~~~~~v~~D  115 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMF-GE----------MGRSNDGIWTVMAN  115 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhh-cc----------ccccCCceEEEEcC
Confidence            3457789999999999999999999999999999989987665443 222110 00          00001247889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.+++.++++       .+|.++|.|+...+.+ ...    ..+...++|+.+..++++++...    .+-.++|++|
T Consensus       116 l~d~~~l~~~i~-------~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~~~~----~~v~r~V~~S  179 (367)
T PLN02686        116 LTEPESLHEAFD-------GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEACVRT----ESVRKCVFTS  179 (367)
T ss_pred             CCCHHHHHHHHH-------hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHHHhc----CCccEEEEec
Confidence            999999888776       3688999888743211 101    11244677888888888876431    1234799998


Q ss_pred             CCCCC-C-----CC----------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          208 GAGSG-G-----SS----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       208 S~~~~-~-----~~----------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      |..+. +     ..                ..+...|+.||.+.+.+++.++.+   .|+++++++|+.|.+|.
T Consensus       180 S~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        180 SLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPG  250 (367)
T ss_pred             cHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCC
Confidence            85211 0     00                012246999999999999887765   48999999999999885

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.58  E-value=4e-14  Score=136.53  Aligned_cols=160  Identities=20%  Similarity=0.228  Sum_probs=120.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++||||+|+||..+++.|+++|++|++++|++++...    +                   ....+.++.+|++|.++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~-------------------~~~~~~~~~~D~~~~~~   57 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----L-------------------EGLDVEIVEGDLRDPAS   57 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----c-------------------ccCCceEEEeeCCCHHH
Confidence            369999999999999999999999999999998654321    1                   11357789999999998


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++       ++|++||+|+...   . .   .++.+..+++|+.++.++++++..    . +.+++|++||.. ..
T Consensus        58 l~~~~~-------~~d~vi~~a~~~~---~-~---~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~-~~  117 (328)
T TIGR03466        58 LRKAVA-------GCRALFHVAADYR---L-W---APDPEEMYAANVEGTRNLLRAALE----A-GVERVVYTSSVA-TL  117 (328)
T ss_pred             HHHHHh-------CCCEEEEeceecc---c-C---CCCHHHHHHHHHHHHHHHHHHHHH----h-CCCeEEEEechh-hc
Confidence            877665       5899999998532   1 1   123567889999999999888754    2 346899998862 22


Q ss_pred             CC--C--------C-----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          214 SS--T--------P-----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       214 ~~--~--------~-----~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ..  .        +     ....|+.+|.+.+.+++.++.+.   |+++..+.|+.+-.+.
T Consensus       118 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~~~G~~  175 (328)
T TIGR03466       118 GVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK---GLPVVIVNPSTPIGPR  175 (328)
T ss_pred             CcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc---CCCEEEEeCCccCCCC
Confidence            21  0        0     13479999999999998877653   7899999998886553

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.57  E-value=8e-14  Score=134.12  Aligned_cols=168  Identities=17%  Similarity=0.108  Sum_probs=121.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||.+++++|+++|++|++.+|......+....+.+                  ..++..+.+|+++.+++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~   62 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER------------------ITRVTFVEGDLRDRELL   62 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc------------------ccceEEEECCCCCHHHH
Confidence            479999999999999999999999999887643322211111110                  12577889999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++.     +++|++|||||.... .    ...++..+.+++|+.++..+++++.    +. +..++|++||.. ...
T Consensus        63 ~~~~~~-----~~~d~vv~~ag~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~v~~ss~~-~~g  126 (328)
T TIGR01179        63 DRLFEE-----HKIDAVIHFAGLIAV-G----ESVQDPLKYYRNNVVNTLNLLEAMQ----QT-GVKKFIFSSSAA-VYG  126 (328)
T ss_pred             HHHHHh-----CCCcEEEECccccCc-c----hhhcCchhhhhhhHHHHHHHHHHHH----hc-CCCEEEEecchh-hcC
Confidence            887763     479999999997531 1    1223445678999999999988753    23 346899988752 211


Q ss_pred             C-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          215 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       215 ~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      .           ..+...|+.+|++.+.+++.++++.  .++++..+.|+.+..+
T Consensus       127 ~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       127 EPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA  179 (328)
T ss_pred             CCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence            1           1134679999999999999887652  3688999999877665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.51  E-value=3.8e-13  Score=133.43  Aligned_cols=172  Identities=10%  Similarity=0.090  Sum_probs=119.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..+.++|+||||+|.||..++++|+++ |++|++++|+.++.........                .....++.++.+|+
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~----------------~~~~~~~~~~~~Dl   74 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDT----------------VPWSGRIQFHRINI   74 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccc----------------ccCCCCeEEEEcCC
Confidence            445678999999999999999999998 5999999988655432211000                00123688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++       .+|+|||+|+...+ ... ..+   -.+.+..|+.+..++++++..    . . .++|++||
T Consensus        75 ~d~~~l~~~~~-------~~d~ViHlAa~~~~-~~~-~~~---~~~~~~~n~~gt~~ll~aa~~----~-~-~r~v~~SS  136 (386)
T PLN02427         75 KHDSRLEGLIK-------MADLTINLAAICTP-ADY-NTR---PLDTIYSNFIDALPVVKYCSE----N-N-KRLIHFST  136 (386)
T ss_pred             CChHHHHHHhh-------cCCEEEEcccccCh-hhh-hhC---hHHHHHHHHHHHHHHHHHHHh----c-C-CEEEEEee
Confidence            99988877664       47999999997431 111 111   234466799999988887642    2 2 57999998


Q ss_pred             CCCCCCC---------CC------------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 016493          209 AGSGGSS---------TP------------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV  255 (388)
Q Consensus       209 ~~~~~~~---------~~------------------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v  255 (388)
                      .. .+..         .|                        ....|+.||.+.+.+++..+..   .|+.+..+.|+.|
T Consensus       137 ~~-vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~v  212 (386)
T PLN02427        137 CE-VYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNW  212 (386)
T ss_pred             ee-eeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccce
Confidence            52 1110         00                        1236999999998888765543   4799999999988


Q ss_pred             cccc
Q 016493          256 LTDL  259 (388)
Q Consensus       256 ~T~~  259 (388)
                      -.|-
T Consensus       213 yGp~  216 (386)
T PLN02427        213 IGPR  216 (386)
T ss_pred             eCCC
Confidence            7764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.50  E-value=6.8e-13  Score=129.55  Aligned_cols=173  Identities=20%  Similarity=0.261  Sum_probs=115.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+||||+|+||.+++++|+++|  ++|++..|+.+... ..+++.+......    .. .......++.++.+|++++.
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~----~~-~~~~~~~~v~~~~~D~~~~~   74 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEH-AMERLREALRSYR----LW-QEDLARERIEVVAGDLSEPR   74 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHH-HHHHHHHHHHHhC----CC-CchhhhCCEEEEeCCcCccc
Confidence            58999999999999999999999  78999999865321 1122222111000    00 00000146889999998653


Q ss_pred             ------HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          133 ------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       133 ------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                            ....+.       .++|++||||+.... .       ..++...++|+.++.++++.+..    . +..+++++
T Consensus        75 ~gl~~~~~~~~~-------~~~d~vih~a~~~~~-~-------~~~~~~~~~nv~g~~~ll~~a~~----~-~~~~~v~i  134 (367)
T TIGR01746        75 LGLSDAEWERLA-------ENVDTIVHNGALVNW-V-------YPYSELRAANVLGTREVLRLAAS----G-RAKPLHYV  134 (367)
T ss_pred             CCcCHHHHHHHH-------hhCCEEEeCCcEecc-C-------CcHHHHhhhhhHHHHHHHHHHhh----C-CCceEEEE
Confidence                  222221       369999999997431 1       23467788999999998887654    2 23469999


Q ss_pred             cCCCCCCCCC----------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          207 DGAGSGGSST----------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       207 sS~~~~~~~~----------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ||.. .....                .....|+.||.+.+.+++..+.    .|++++.++||.+.++
T Consensus       135 SS~~-v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       135 STIS-VLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN  197 (367)
T ss_pred             cccc-ccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence            9873 22211                1134699999999988876543    3899999999999875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.48  E-value=2.4e-12  Score=121.28  Aligned_cols=187  Identities=17%  Similarity=0.188  Sum_probs=152.7

Q ss_pred             CCCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGa-s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +.++|||.|. +.-|++.+|..|-++|+-|+++..+.++.+...++                    ....+.....|..+
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e--------------------~~~dI~~L~ld~~~   61 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE--------------------DRPDIRPLWLDDSD   61 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc--------------------cCCCCCCcccCCCC
Confidence            3478999996 79999999999999999999999998765443322                    12458888889988


Q ss_pred             HHHHHHHHHHHHhhcC--------------CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          131 PADVQKLSNFAVNEFG--------------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g--------------~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      +.++...++++.+...              ++..+|.......+.+|++.++.+.|...++.|++-++.+++.++|.|+.
T Consensus        62 ~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~  141 (299)
T PF08643_consen   62 PSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRS  141 (299)
T ss_pred             CcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8777777777765543              35566666666656899999999999999999999999999999999998


Q ss_pred             CC-CCcEEEEec-CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          197 QP-KGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       197 ~~-~~g~Iv~is-S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +. .+.+||.+. |+ .+....|..+.-.....++.+|++.|++|+.+.+|.|..+.-|.++-..
T Consensus       142 ~~~~~~~iil~~Psi-~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~  205 (299)
T PF08643_consen  142 RSNQKSKIILFNPSI-SSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGN  205 (299)
T ss_pred             ccCCCceEEEEeCch-hhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeecccc
Confidence            32 345666555 55 5667788889999999999999999999999999999999999998653

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.46  E-value=1.2e-12  Score=124.26  Aligned_cols=165  Identities=16%  Similarity=0.146  Sum_probs=119.5

Q ss_pred             EEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           57 VITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        57 lITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      |||||+|.||..++++|+++|  ++|.+.++++.....  ..+.                  ......++.+|++|++++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~------------------~~~~~~~~~~Di~d~~~l   60 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQ------------------KSGVKEYIQGDITDPESL   60 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhh------------------cccceeEEEeccccHHHH
Confidence            699999999999999999999  789888887653211  1111                  112234899999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .++++       ++|++||.|..... .     .....+.++++|+.|+-++++++...     +-.++|++||......
T Consensus        61 ~~a~~-------g~d~V~H~Aa~~~~-~-----~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~  122 (280)
T PF01073_consen   61 EEALE-------GVDVVFHTAAPVPP-W-----GDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFD  122 (280)
T ss_pred             HHHhc-------CCceEEEeCccccc-c-----CcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEe
Confidence            88776       68999999987542 1     13445789999999999999988642     4568999998743221


Q ss_pred             ---CC-------------CCchhhHHHHHHHHHHHHHHHH-HhC-CCCeEEEEEecCcccccc
Q 016493          215 ---ST-------------PLTAVYGSTKCGLRQLQASLFK-ESK-RSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       215 ---~~-------------~~~~~Y~aSK~al~~l~~~la~-el~-~~gI~vn~v~PG~v~T~~  259 (388)
                         +.             .....|+.||+..+.++..... ++. ...++..+|+|..|-.|.
T Consensus       123 ~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~  185 (280)
T PF01073_consen  123 NYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG  185 (280)
T ss_pred             ccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence               10             1234799999988887765543 122 124888999999987774

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.45  E-value=4.7e-12  Score=116.19  Aligned_cols=164  Identities=26%  Similarity=0.278  Sum_probs=125.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |+||||+|-||.+++++|+++|+.|+...|+..........                      .++.++.+|+.|.++++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----------------------~~~~~~~~dl~~~~~~~   58 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----------------------LNVEFVIGDLTDKEQLE   58 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----------------------TTEEEEESETTSHHHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----------------------ceEEEEEeecccccccc
Confidence            79999999999999999999999998888876543221111                      26888999999999999


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  215 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  215 (388)
                      ++++..     ++|.+||+|+...     ...+.+.....++.|+.+..++++++...     +..+++++||.......
T Consensus        59 ~~~~~~-----~~d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~  123 (236)
T PF01370_consen   59 KLLEKA-----NIDVVIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDP  123 (236)
T ss_dssp             HHHHHH-----TESEEEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSS
T ss_pred             cccccc-----CceEEEEeecccc-----ccccccccccccccccccccccccccccc-----ccccccccccccccccc
Confidence            999876     7999999998732     11223556788889998888888877543     23689999885221111


Q ss_pred             --C--------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          216 --T--------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       216 --~--------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                        .        .+...|+.+|...+.+.+.+.++.   ++++..+.|+.+-.|.
T Consensus       124 ~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  124 DGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             SSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccccccccccccccccc---cccccccccccccccc
Confidence              1        134569999999999999888776   7999999999998776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.45  E-value=2.5e-12  Score=126.91  Aligned_cols=178  Identities=15%  Similarity=0.084  Sum_probs=125.6

Q ss_pred             hhhhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCc
Q 016493           40 GANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA  119 (388)
Q Consensus        40 ~~~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  119 (388)
                      ...+..+..+.-++|+|+||||+|.||.++++.|.++|++|++++|.....      +..                 ...
T Consensus         8 ~~~~~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~-----------------~~~   64 (370)
T PLN02695          8 LAELEREPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSE-----------------DMF   64 (370)
T ss_pred             hhhcCCCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------ccc-----------------ccc
Confidence            345555666777889999999999999999999999999999999864321      000                 011


Q ss_pred             eEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          120 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       120 ~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      ...++.+|++|.+++.++++       ++|++||.|+...+ .....   ......+..|+.++.++++++..    . +
T Consensus        65 ~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~-~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~-~  128 (370)
T PLN02695         65 CHEFHLVDLRVMENCLKVTK-------GVDHVFNLAADMGG-MGFIQ---SNHSVIMYNNTMISFNMLEAARI----N-G  128 (370)
T ss_pred             cceEEECCCCCHHHHHHHHh-------CCCEEEEcccccCC-ccccc---cCchhhHHHHHHHHHHHHHHHHH----h-C
Confidence            24568899999887766543       58999999986431 11111   12234567899999999887643    2 2


Q ss_pred             CcEEEEecCCCC-CC---------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          200 GGHIFNMDGAGS-GG---------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       200 ~g~Iv~isS~~~-~~---------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ..++|++||... +.               .+..+...|+.+|.+.+.+++..+..+   |+++..+.|+.+-.|-
T Consensus       129 vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        129 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPF  201 (370)
T ss_pred             CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCC
Confidence            458999988521 10               022344589999999999988776543   7899999999887763

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.45  E-value=2.7e-12  Score=127.58  Aligned_cols=165  Identities=12%  Similarity=0.125  Sum_probs=117.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH--HHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT--VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..++++++||||+|+||++++++|+++|++|++++|+.++.+..  ..++..                 ....+.++.+|
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-----------------~~~~v~~v~~D  119 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-----------------ELPGAEVVFGD  119 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-----------------hcCCceEEEee
Confidence            45678999999999999999999999999999999987654311  111111                 12357889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++..   .+++|+||||+|...  ..    .    ...+++|+.+..++++++.    +. +.+++|++|
T Consensus       120 l~d~~~l~~~~~~~---~~~~D~Vi~~aa~~~--~~----~----~~~~~vn~~~~~~ll~aa~----~~-gv~r~V~iS  181 (390)
T PLN02657        120 VTDADSLRKVLFSE---GDPVDVVVSCLASRT--GG----V----KDSWKIDYQATKNSLDAGR----EV-GAKHFVLLS  181 (390)
T ss_pred             CCCHHHHHHHHHHh---CCCCcEEEECCccCC--CC----C----ccchhhHHHHHHHHHHHHH----Hc-CCCEEEEEe
Confidence            99999999887753   126999999998532  11    1    1235678888877777653    33 356899999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      |. ...   .+...|..+|...+...+.     ...+++...++|+.+-.+
T Consensus       182 S~-~v~---~p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~  223 (390)
T PLN02657        182 AI-CVQ---KPLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKS  223 (390)
T ss_pred             ec-ccc---CcchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcc
Confidence            87 332   2345688899887776543     245899999999876543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.43  E-value=4.8e-12  Score=116.90  Aligned_cols=167  Identities=14%  Similarity=0.157  Sum_probs=127.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC-----ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD--RVVVASR-----SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~--~Vil~~R-----~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +++|||||.|.||..+++.+.++.-  +|+..+.     +.+.+    +.+.                  ..++..+++.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l----~~~~------------------~~~~~~fv~~   58 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL----ADVE------------------DSPRYRFVQG   58 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH----Hhhh------------------cCCCceEEec
Confidence            4689999999999999999998873  5677664     33322    1221                  2368999999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |+.|.+.+.+++++-     ++|+++|-|.-..     .+.+.++-+..+++|++|++++++++..+..+    -+++.|
T Consensus        59 DI~D~~~v~~~~~~~-----~~D~VvhfAAESH-----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HI  124 (340)
T COG1088          59 DICDRELVDRLFKEY-----QPDAVVHFAAESH-----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHI  124 (340)
T ss_pred             cccCHHHHHHHHHhc-----CCCeEEEechhcc-----ccccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEe
Confidence            999999998888754     7999999998654     45566677888999999999999999877542    357777


Q ss_pred             cCCC-C-----------CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          207 DGAG-S-----------GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       207 sS~~-~-----------~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      |.-. .           -..+..+.+.|++||++-..|+++..+-+   |+.++...+..--.|.
T Consensus       125 STDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPy  186 (340)
T COG1088         125 STDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPY  186 (340)
T ss_pred             ccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCC
Confidence            7521 0           12345677899999999999999999887   6788777776555553

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.41  E-value=6.1e-12  Score=122.98  Aligned_cols=161  Identities=11%  Similarity=0.073  Sum_probs=113.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC-CH
Q 016493           54 RNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-EP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls-~~  131 (388)
                      ++|+||||+|.||..++++|+++ |++|++++|+.++...    +.                  ....+.++.+|++ +.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~------------------~~~~~~~~~~Dl~~~~   59 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV------------------NHPRMHFFEGDITINK   59 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc------------------cCCCeEEEeCCCCCCH
Confidence            57999999999999999999986 6999999987643321    11                  1135888999998 66


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +.+.++++       ++|++||+|+...+ ..    ..++.+..+++|+.+..++++++..    . + .++|++||.. 
T Consensus        60 ~~~~~~~~-------~~d~ViH~aa~~~~-~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~-~-~~~v~~SS~~-  120 (347)
T PRK11908         60 EWIEYHVK-------KCDVILPLVAIATP-AT----YVKQPLRVFELDFEANLPIVRSAVK----Y-G-KHLVFPSTSE-  120 (347)
T ss_pred             HHHHHHHc-------CCCEEEECcccCCh-HH----hhcCcHHHHHHHHHHHHHHHHHHHh----c-C-CeEEEEecce-
Confidence            65555433       58999999997431 11    1123356789999999988887643    3 2 5899998862 


Q ss_pred             CCCCC------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          212 GGSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       212 ~~~~~------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      .+...                  .+...|+.||.+.+.+.+.++.+.   |+.+..+.|+.+-.|
T Consensus       121 vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~v~Gp  182 (347)
T PRK11908        121 VYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE---GLNFTLFRPFNWIGP  182 (347)
T ss_pred             eeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHc---CCCeEEEeeeeeeCC
Confidence            11100                  112369999999998888776543   677888888777555

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.40  E-value=8e-12  Score=132.64  Aligned_cols=173  Identities=16%  Similarity=0.155  Sum_probs=121.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .++|+||||||+|.||.+++++|+++  |++|+..+|..  +...    .+...               ....++.++.+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~----~l~~~---------------~~~~~v~~~~~   64 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK----NLNPS---------------KSSPNFKFVKG   64 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh----hhhhc---------------ccCCCeEEEEC
Confidence            46799999999999999999999998  68899888753  1111    11110               01246888999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.+.+++++..     .++|++||+|+....     +...++....+++|+.++.++++++..    .+...++|++
T Consensus        65 Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~  130 (668)
T PLN02260         65 DIASADLVNYLLIT-----EGIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHV  130 (668)
T ss_pred             CCCChHHHHHHHhh-----cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEE
Confidence            99998887665432     379999999997541     112223356789999999998887643    2224689999


Q ss_pred             cCCCC-CCC------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          207 DGAGS-GGS------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       207 sS~~~-~~~------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ||... +..            +..+...|+.+|.+.+.+++....++   ++.+..+.|+.|-.|-
T Consensus       131 SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~  193 (668)
T PLN02260        131 STDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN  193 (668)
T ss_pred             cchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcC
Confidence            98521 100            11134579999999999998877654   6888899998887653

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.40  E-value=6.3e-12  Score=120.65  Aligned_cols=160  Identities=11%  Similarity=0.128  Sum_probs=109.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |+||||+|.||.+++++|+++|++++++.|+....... .                          ....+|+.|..+.+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~--------------------------~~~~~~~~d~~~~~   54 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V--------------------------NLVDLDIADYMDKE   54 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H--------------------------hhhhhhhhhhhhHH
Confidence            79999999999999999999999777666654322110 0                          11245777766666


Q ss_pred             HHHHHHHh--hcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          136 KLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       136 ~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      .+.+.+.+  .++++|++||+||.... .   ..+.   +..+++|+.++.++++++..    . + .++|++||.. .+
T Consensus        55 ~~~~~~~~~~~~~~~d~Vih~A~~~~~-~---~~~~---~~~~~~n~~~t~~ll~~~~~----~-~-~~~i~~SS~~-vy  120 (308)
T PRK11150         55 DFLAQIMAGDDFGDIEAIFHEGACSST-T---EWDG---KYMMDNNYQYSKELLHYCLE----R-E-IPFLYASSAA-TY  120 (308)
T ss_pred             HHHHHHhcccccCCccEEEECceecCC-c---CCCh---HHHHHHHHHHHHHHHHHHHH----c-C-CcEEEEcchH-Hh
Confidence            65555432  34579999999986431 1   1222   34689999999999888743    2 2 3699998862 11


Q ss_pred             CC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          214 SS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       214 ~~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ..           ..+...|+.||.+.+.+++..+.+   .++.+..+.|+.+-.|-
T Consensus       121 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        121 GGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPR  174 (308)
T ss_pred             CcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCC
Confidence            11           123457999999999888777654   36888889988876653

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.39  E-value=7.5e-12  Score=132.50  Aligned_cols=164  Identities=11%  Similarity=0.074  Sum_probs=117.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++++|+||||+|.||.+++++|+++ |++|+.++|+......    +.                  ...++.++.+|++|
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~------------------~~~~~~~~~gDl~d  371 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL------------------GHPRFHFVEGDISI  371 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc------------------CCCceEEEeccccC
Confidence            4688999999999999999999986 7999999997643221    10                  11357888999998


Q ss_pred             HHH-HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          131 PAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       131 ~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      .++ ++++++       ++|++||.|+...+..  ..   +..+..+++|+.++.++++++..    . + .++|++||.
T Consensus       372 ~~~~l~~~l~-------~~D~ViHlAa~~~~~~--~~---~~~~~~~~~Nv~~t~~ll~a~~~----~-~-~~~V~~SS~  433 (660)
T PRK08125        372 HSEWIEYHIK-------KCDVVLPLVAIATPIE--YT---RNPLRVFELDFEENLKIIRYCVK----Y-N-KRIIFPSTS  433 (660)
T ss_pred             cHHHHHHHhc-------CCCEEEECccccCchh--hc---cCHHHHHHhhHHHHHHHHHHHHh----c-C-CeEEEEcch
Confidence            655 333332       5899999999754211  11   22345789999999999888754    2 2 479999885


Q ss_pred             CCCCCC-----C----------C---CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          210 GSGGSS-----T----------P---LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       210 ~~~~~~-----~----------~---~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      . .+..     .          |   +...|+.||.+.+.+++..++++   |+++..+.|+.+..|.
T Consensus       434 ~-vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        434 E-VYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPR  497 (660)
T ss_pred             h-hcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCC
Confidence            2 1110     0          1   12369999999999988776554   6899999999887663

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=2e-11  Score=113.26  Aligned_cols=151  Identities=17%  Similarity=0.173  Sum_probs=113.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .++|||||.|-||..++++|++.|++|++.+.-...-.+....                      ....+++.|+.|.+-
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------------------~~~~f~~gDi~D~~~   58 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------------------LQFKFYEGDLLDRAL   58 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------------------ccCceEEeccccHHH
Confidence            3699999999999999999999999999998754332222211                      115789999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +++++++-     ++|.+||-||...     ...+.++-.+.++.|+.|++.|++++..    . +-..+||-||++.-.
T Consensus        59 L~~vf~~~-----~idaViHFAa~~~-----VgESv~~Pl~Yy~NNv~gTl~Ll~am~~----~-gv~~~vFSStAavYG  123 (329)
T COG1087          59 LTAVFEEN-----KIDAVVHFAASIS-----VGESVQNPLKYYDNNVVGTLNLIEAMLQ----T-GVKKFIFSSTAAVYG  123 (329)
T ss_pred             HHHHHHhc-----CCCEEEECccccc-----cchhhhCHHHHHhhchHhHHHHHHHHHH----h-CCCEEEEecchhhcC
Confidence            99888764     8999999999754     2235556678999999999999877544    3 356788887763111


Q ss_pred             C----------CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 016493          214 S----------STPLTAVYGSTKCGLRQLQASLFKESK  241 (388)
Q Consensus       214 ~----------~~~~~~~Y~aSK~al~~l~~~la~el~  241 (388)
                      .          +..+...|+.||...+.+.+.+++...
T Consensus       124 ~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         124 EPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             CCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            1          122345799999999999998887664

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.38  E-value=2.8e-11  Score=107.04  Aligned_cols=172  Identities=20%  Similarity=0.253  Sum_probs=119.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |+|+||||.+|+.++++|+++|++|+++.|++++.++                         ..+++.+++|+.|++++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------------------~~~~~~~~~d~~d~~~~~   55 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------------------SPGVEIIQGDLFDPDSVK   55 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------------------CTTEEEEESCTTCHHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------------------ccccccceeeehhhhhhh
Confidence            7899999999999999999999999999999987654                         156889999999998887


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  215 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  215 (388)
                      +.++       +.|.+|+++|...  .       +             ...++.++..+++. +..++|.+|+.. ....
T Consensus        56 ~al~-------~~d~vi~~~~~~~--~-------~-------------~~~~~~~~~a~~~~-~~~~~v~~s~~~-~~~~  104 (183)
T PF13460_consen   56 AALK-------GADAVIHAAGPPP--K-------D-------------VDAAKNIIEAAKKA-GVKRVVYLSSAG-VYRD  104 (183)
T ss_dssp             HHHT-------TSSEEEECCHSTT--T-------H-------------HHHHHHHHHHHHHT-TSSEEEEEEETT-GTTT
T ss_pred             hhhh-------hcchhhhhhhhhc--c-------c-------------cccccccccccccc-ccccceeeeccc-cCCC
Confidence            7665       6899999998643  1       0             45566677777776 466999998863 2222


Q ss_pred             CCC---------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          216 TPL---------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       216 ~~~---------~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      .+.         ...|...|...+.+.       ...+++...++||.+..+...................+.+++|+.+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~  177 (183)
T PF13460_consen  105 PPGLFSDEDKPIFPEYARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKEGGPQGVNFISREDVAKAI  177 (183)
T ss_dssp             CTSEEEGGTCGGGHHHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESSTSTTSHCEEEHHHHHHHH
T ss_pred             CCcccccccccchhhhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEeccCCCCcCcCCHHHHHHHH
Confidence            222         134666665544333       2348999999999997764321110000111112334688888888


Q ss_pred             hhhh
Q 016493          287 VPRI  290 (388)
Q Consensus       287 l~~~  290 (388)
                      +..+
T Consensus       178 ~~~l  181 (183)
T PF13460_consen  178 VEAL  181 (183)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7655

...

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.36  E-value=1.5e-11  Score=117.99  Aligned_cols=162  Identities=16%  Similarity=0.087  Sum_probs=110.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      |+||||+|.||.+++++|.++|+ .|++++|..... .. .++                      ....+..|+++.+.+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~----------------------~~~~~~~d~~~~~~~   56 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL----------------------ADLVIADYIDKEDFL   56 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh----------------------hheeeeccCcchhHH
Confidence            68999999999999999999998 688887754321 10 011                      012456788887776


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +.+.+.   .+.++|++||+|+...       .+.++.+..+++|+.++.++++++..    .  +.++|++||.. .+.
T Consensus        57 ~~~~~~---~~~~~D~vvh~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~v~~SS~~-vy~  119 (314)
T TIGR02197        57 DRLEKG---AFGKIEAIFHQGACSD-------TTETDGEYMMENNYQYSKRLLDWCAE----K--GIPFIYASSAA-TYG  119 (314)
T ss_pred             HHHHhh---ccCCCCEEEECccccC-------ccccchHHHHHHHHHHHHHHHHHHHH----h--CCcEEEEccHH-hcC
Confidence            665542   3457999999999642       12234567889999999999988754    2  24799998852 221


Q ss_pred             C-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          215 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       215 ~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .           ..+...|+.||.+.+.+++....+. ..++++..+.|+.+-.|-
T Consensus       120 ~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~  174 (314)
T TIGR02197       120 DGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPR  174 (314)
T ss_pred             CCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCC
Confidence            0           1145679999999998887533221 124677888887776553

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.35  E-value=2.1e-11  Score=122.92  Aligned_cols=164  Identities=18%  Similarity=0.151  Sum_probs=113.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.++++|+||||+|.||..++++|+++|++|++++|......+   .+....               ...++.++..|+.
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~---------------~~~~~~~i~~D~~  177 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHF---------------SNPNFELIRHDVV  177 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhc---------------cCCceEEEECCcc
Confidence            3467899999999999999999999999999999875432211   111100               1235777888987


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +..     +       .++|+|||.|+...+ . ...   ++.+..+++|+.++.++++++..    . + .++|++||.
T Consensus       178 ~~~-----l-------~~~D~ViHlAa~~~~-~-~~~---~~p~~~~~~Nv~gt~nLleaa~~----~-g-~r~V~~SS~  234 (442)
T PLN02206        178 EPI-----L-------LEVDQIYHLACPASP-V-HYK---FNPVKTIKTNVVGTLNMLGLAKR----V-G-ARFLLTSTS  234 (442)
T ss_pred             Chh-----h-------cCCCEEEEeeeecch-h-hhh---cCHHHHHHHHHHHHHHHHHHHHH----h-C-CEEEEECCh
Confidence            642     1       258999999987431 1 111   22357889999999999988753    2 2 379999886


Q ss_pred             CCCCC----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          210 GSGGS----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       210 ~~~~~----------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      . .+.                +......|+.+|.+.+.+++...++.   ++++..+.|+.+-.|
T Consensus       235 ~-VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp  295 (442)
T PLN02206        235 E-VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGP  295 (442)
T ss_pred             H-HhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCC
Confidence            2 211                11124579999999998887765553   678888887766554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.35  E-value=2.2e-11  Score=115.50  Aligned_cols=143  Identities=20%  Similarity=0.237  Sum_probs=107.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|.||.+++++|+++|++|++++|+                                      .+|+.+.+++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------------------~~d~~~~~~~   42 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------------------------QLDLTDPEAL   42 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------------------ccCCCCHHHH
Confidence            37999999999999999999999999998874                                      2589999998


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++..     ++|++||+||... ..    ......+..+++|+.++.++++++..    .  +.++|++||. +.+.
T Consensus        43 ~~~~~~~-----~~d~vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~Ss~-~vy~  105 (287)
T TIGR01214        43 ERLLRAI-----RPDAVVNTAAYTD-VD----GAESDPEKAFAVNALAPQNLARAAAR----H--GARLVHISTD-YVFD  105 (287)
T ss_pred             HHHHHhC-----CCCEEEECCcccc-cc----ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEeee-eeec
Confidence            8887653     6899999999743 11    11223467789999999999888643    2  2479999875 2111


Q ss_pred             C-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          215 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       215 ~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +           ..+...|+.+|.+.+.+++.+       +.++..+.|+.+-.+.
T Consensus       106 ~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       106 GEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             CCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence            1           113457999999988877654       3577889999887653

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.33  E-value=3.5e-11  Score=112.74  Aligned_cols=160  Identities=18%  Similarity=0.158  Sum_probs=119.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++||||||+|-||.+.+.+|.++|+.|++++.=.....+..+.+++...              .+.++.+++.|+.|.+
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~--------------~~~~v~f~~~Dl~D~~   67 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG--------------EGKSVFFVEGDLNDAE   67 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC--------------CCCceEEEEeccCCHH
Confidence            68999999999999999999999999999997533333333344443322              1367999999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      .++++++..     ++|.|+|-|+... .+    .+.+......+.|+.|+++++...    ++.+ -..+|+.||+..-
T Consensus        68 ~L~kvF~~~-----~fd~V~Hfa~~~~-vg----eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~-~~~~V~sssatvY  132 (343)
T KOG1371|consen   68 ALEKLFSEV-----KFDAVMHFAALAA-VG----ESMENPLSYYHNNIAGTLNLLEVM----KAHN-VKALVFSSSATVY  132 (343)
T ss_pred             HHHHHHhhc-----CCceEEeehhhhc-cc----hhhhCchhheehhhhhHHHHHHHH----HHcC-CceEEEecceeee
Confidence            999999876     6999999999754 12    233344788899999999987664    5443 5678888876311


Q ss_pred             C----------CCCC-CchhhHHHHHHHHHHHHHHHHHhC
Q 016493          213 G----------SSTP-LTAVYGSTKCGLRQLQASLFKESK  241 (388)
Q Consensus       213 ~----------~~~~-~~~~Y~aSK~al~~l~~~la~el~  241 (388)
                      .          .+.. +...|+.+|.+++...+....-+.
T Consensus       133 G~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  133 GLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             cCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            1          1112 567899999999999988877654

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.32  E-value=3.7e-11  Score=115.03  Aligned_cols=162  Identities=18%  Similarity=0.147  Sum_probs=117.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      ||||||+|.||..++++|.++|++|+.++|...+.....                        ..+.++.+|+++.+.+.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------------~~~~~~~~d~~~~~~~~   58 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------------------SGVEFVVLDLTDRDLVD   58 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------------------cccceeeecccchHHHH
Confidence            999999999999999999999999999999766532110                        24677889999985555


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  215 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  215 (388)
                      +..+..     + |.+||+|+....  + ..... .....+++|+.++.++++++..    . +..++|+.||. +...+
T Consensus        59 ~~~~~~-----~-d~vih~aa~~~~--~-~~~~~-~~~~~~~~nv~gt~~ll~aa~~----~-~~~~~v~~ss~-~~~~~  122 (314)
T COG0451          59 ELAKGV-----P-DAVIHLAAQSSV--P-DSNAS-DPAEFLDVNVDGTLNLLEAARA----A-GVKRFVFASSV-SVVYG  122 (314)
T ss_pred             HHHhcC-----C-CEEEEccccCch--h-hhhhh-CHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeCCC-ceECC
Confidence            544421     1 999999998541  1 11111 3457899999999999998865    2 35678886664 21211


Q ss_pred             -----------CCCch--hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          216 -----------TPLTA--VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       216 -----------~~~~~--~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                                 .+..+  .|+.||.+.+.+++....   ..|+.+..+.|+.+--|..
T Consensus       123 ~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~  177 (314)
T COG0451         123 DPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGD  177 (314)
T ss_pred             CCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCC
Confidence                       11122  499999999999988887   4578999999988766543

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.31  E-value=8.6e-11  Score=113.53  Aligned_cols=147  Identities=13%  Similarity=0.106  Sum_probs=105.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|.||.+++++|+++|++|++.+|+.++...    +.                   ...+.++.+|++|++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~-------------------~~~v~~v~~Dl~d~~~l   58 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK-------------------EWGAELVYGDLSLPETL   58 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh-------------------hcCCEEEECCCCCHHHH
Confidence            69999999999999999999999999999998754321    11                   12477899999999888


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .++++       ++|++||+++...  .        +.....++|+.++.++++++..    . +-.++|++||.+....
T Consensus        59 ~~al~-------g~d~Vi~~~~~~~--~--------~~~~~~~~~~~~~~~l~~aa~~----~-gvkr~I~~Ss~~~~~~  116 (317)
T CHL00194         59 PPSFK-------GVTAIIDASTSRP--S--------DLYNAKQIDWDGKLALIEAAKA----A-KIKRFIFFSILNAEQY  116 (317)
T ss_pred             HHHHC-------CCCEEEECCCCCC--C--------CccchhhhhHHHHHHHHHHHHH----c-CCCEEEEecccccccc
Confidence            76654       5899999876421  1        1123566788888887776643    3 3458999987522211


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  256 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~  256 (388)
                         +...|..+|...+.+.+       ..|+.+..+.|+.+-
T Consensus       117 ---~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~  148 (317)
T CHL00194        117 ---PYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFF  148 (317)
T ss_pred             ---CCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHh
Confidence               23458888887766543       247888889998553

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.31  E-value=4.5e-11  Score=114.54  Aligned_cols=131  Identities=20%  Similarity=0.196  Sum_probs=95.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      ++|||||+|.||.+++++|+++| +|+.++|...                                  .+..|++|.+++
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------------------~~~~Dl~d~~~~   46 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------------------------DYCGDFSNPEGV   46 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------------------cccCCCCCHHHH
Confidence            59999999999999999999999 7888887421                                  135699999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC--C
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--G  212 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~--~  212 (388)
                      +++++..     ++|++||+|+....     +...++-+..+++|+.++.++++++..    .  +.++|++||...  +
T Consensus        47 ~~~~~~~-----~~D~Vih~Aa~~~~-----~~~~~~~~~~~~~N~~~~~~l~~aa~~----~--g~~~v~~Ss~~Vy~~  110 (299)
T PRK09987         47 AETVRKI-----RPDVIVNAAAHTAV-----DKAESEPEFAQLLNATSVEAIAKAANE----V--GAWVVHYSTDYVFPG  110 (299)
T ss_pred             HHHHHhc-----CCCEEEECCccCCc-----chhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEccceEECC
Confidence            8877753     68999999997541     111223356678999999999887754    2  247899987421  0


Q ss_pred             --CC------CCCCchhhHHHHHHHHHHHHHH
Q 016493          213 --GS------STPLTAVYGSTKCGLRQLQASL  236 (388)
Q Consensus       213 --~~------~~~~~~~Y~aSK~al~~l~~~l  236 (388)
                        ..      +..+...|+.||.+.+.+++..
T Consensus       111 ~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987        111 TGDIPWQETDATAPLNVYGETKLAGEKALQEH  142 (299)
T ss_pred             CCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence              01      1123357999999988887654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.30  E-value=3.5e-11  Score=115.01  Aligned_cols=148  Identities=14%  Similarity=0.041  Sum_probs=107.4

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHHH
Q 016493           57 VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK  136 (388)
Q Consensus        57 lITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~  136 (388)
                      +||||+|.||..+++.|+++|++|+++.+.                                     ..+|++|.+++++
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------------------~~~Dl~~~~~l~~   43 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------------------KELDLTRQADVEA   43 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------------------ccCCCCCHHHHHH
Confidence            699999999999999999999988765431                                     1369999998888


Q ss_pred             HHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-
Q 016493          137 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS-  215 (388)
Q Consensus       137 ~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~-  215 (388)
                      +++..     ++|++||+|+...  ....  ..++.+..+++|+.++.++++++..    . +..++|++||.. .+.+ 
T Consensus        44 ~~~~~-----~~d~Vih~A~~~~--~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~----~-~~~~~i~~SS~~-vyg~~  108 (306)
T PLN02725         44 FFAKE-----KPTYVILAAAKVG--GIHA--NMTYPADFIRENLQIQTNVIDAAYR----H-GVKKLLFLGSSC-IYPKF  108 (306)
T ss_pred             HHhcc-----CCCEEEEeeeeec--ccch--hhhCcHHHHHHHhHHHHHHHHHHHH----c-CCCeEEEeCcee-ecCCC
Confidence            77653     6899999998742  1110  1122345688999999988888753    2 245899998852 2111 


Q ss_pred             --------------C-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          216 --------------T-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       216 --------------~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                                    . |....|+.||.+.+.+.+.+.++.   ++++..+.|+.+-.|.
T Consensus       109 ~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        109 APQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH  164 (306)
T ss_pred             CCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence                          1 112359999999998888776654   6889999999887664

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.28  E-value=6.8e-11  Score=119.04  Aligned_cols=165  Identities=19%  Similarity=0.188  Sum_probs=112.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +-+.++|+||||+|.||..++++|+++|++|++++|......+....+.                  ...++.++..|+.
T Consensus       117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~------------------~~~~~~~~~~Di~  178 (436)
T PLN02166        117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF------------------GNPRFELIRHDVV  178 (436)
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc------------------cCCceEEEECccc
Confidence            3445789999999999999999999999999999986432111111110                  1135677888887


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +..        +    .++|+|||.|+...+ . ....   +-+..+++|+.++.++++++...      +.++|++||.
T Consensus       179 ~~~--------~----~~~D~ViHlAa~~~~-~-~~~~---~p~~~~~~Nv~gT~nLleaa~~~------g~r~V~~SS~  235 (436)
T PLN02166        179 EPI--------L----LEVDQIYHLACPASP-V-HYKY---NPVKTIKTNVMGTLNMLGLAKRV------GARFLLTSTS  235 (436)
T ss_pred             ccc--------c----cCCCEEEECceeccc-h-hhcc---CHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECcH
Confidence            642        1    258999999987431 1 1111   23578899999999998887542      2379999886


Q ss_pred             CC-CCC--------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          210 GS-GGS--------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       210 ~~-~~~--------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      .. +..              +......|+.+|.+.+.+++...+..   ++.+..+.|+.+-.|
T Consensus       236 ~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp  296 (436)
T PLN02166        236 EVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGP  296 (436)
T ss_pred             HHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCC
Confidence            21 110              11123569999999999888776543   678888888766655

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.20  E-value=1.1e-10  Score=109.01  Aligned_cols=173  Identities=20%  Similarity=0.234  Sum_probs=98.8

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH---
Q 016493           58 ITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA---  132 (388)
Q Consensus        58 ITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~---  132 (388)
                      ||||||.||..+.++|++++.  +|++..|..+.. ...+++.+...+......   .......+++++..|++++.   
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~-~~~~rl~~~l~~~~~~~~---~~~~~~~ri~~v~GDl~~~~lGL   76 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ-SALERLKDALKEYGLWDD---LDKEALSRIEVVEGDLSQPNLGL   76 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH-HHHHHHHGGG-SS-HHHH---H-HHHTTTEEEEE--TTSGGGG-
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc-cchhhhhhhcccccchhh---hhhhhhccEEEEeccccccccCC
Confidence            799999999999999999986  999999976432 122233221110000000   00002478999999999854   


Q ss_pred             ---HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          133 ---DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       133 ---~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                         +.+.+.+       .+|++||||+......        .++...++|+.|+.++++.+..    . +..+++++||.
T Consensus        77 ~~~~~~~L~~-------~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~----~-~~~~~~~iSTa  136 (249)
T PF07993_consen   77 SDEDYQELAE-------EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQ----G-KRKRFHYISTA  136 (249)
T ss_dssp             -HHHHHHHHH-------H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTS----S-S---EEEEEEG
T ss_pred             ChHHhhcccc-------ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHh----c-cCcceEEeccc
Confidence               3333332       5899999999754111        3345778999999999888752    2 23389999984


Q ss_pred             CCC-CCCC------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccc
Q 016493          210 GSG-GSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  257 (388)
Q Consensus       210 ~~~-~~~~------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T  257 (388)
                      ... ....                  .....|..||..-+.+.+..+.+.   |+.+..+.||.|-.
T Consensus       137 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  137 YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG  200 (249)
T ss_dssp             GGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred             cccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence            211 1110                  223479999999999988877663   68899999999966

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02996 fatty acyl-CoA reductase

Probab=99.18  E-value=4.6e-10  Score=114.71  Aligned_cols=185  Identities=20%  Similarity=0.232  Sum_probs=116.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChHH---HHHHHHHHHHH-HhhhhhhcCCCCcccccCceEEE
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSES---VRMTVTELEEN-LKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G---~~Vil~~R~~~~---l~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ++||+|+||||+|.||..++++|++.+   .+|++..|....   .+.+..++... ..+......+.........++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            588999999999999999999999865   368888886532   11111121110 00000000000000011257899


Q ss_pred             EEccCCCH-------HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          124 IACDVCEP-------ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       124 ~~~Dls~~-------~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      +..|++++       +.++++++       ++|++||+|+... .    .   +..+..+++|+.|+.++++++...   
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~-~----~---~~~~~~~~~Nv~gt~~ll~~a~~~---  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN-F----D---ERYDVALGINTLGALNVLNFAKKC---  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC-C----c---CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            99999843       33444333       5899999999753 1    1   235678999999999998877542   


Q ss_pred             CCCCcEEEEecCCCC-CCCC-------CC---------------------------------------------------
Q 016493          197 QPKGGHIFNMDGAGS-GGSS-------TP---------------------------------------------------  217 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~-~~~~-------~~---------------------------------------------------  217 (388)
                       ++..++|++||... +...       .+                                                   
T Consensus       151 -~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        151 -VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             12347899887521 1100       00                                                   


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          218 --LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       218 --~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                        ....|+.||+..+.+++..    .. ++.+..+.|+.|-.+.
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~----~~-~lpv~i~RP~~V~G~~  268 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNF----KE-NLPLVIIRPTMITSTY  268 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHh----cC-CCCEEEECCCEeccCC
Confidence              1135999999888888543    22 7999999999997764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.18  E-value=6.5e-10  Score=117.74  Aligned_cols=163  Identities=19%  Similarity=0.177  Sum_probs=110.5

Q ss_pred             eEEEEcCCChHHHHHHHHHH--HCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFL--LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La--~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++||||+|.||.+++++|+  ++|++|++++|+... ... ..+....               ...++.++.+|++|++
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~---------------~~~~v~~~~~Dl~~~~   64 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYW---------------GADRVVPLVGDLTEPG   64 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhc---------------CCCcEEEEecccCCcc
Confidence            69999999999999999999  589999999997532 111 1121110               1146888999999853


Q ss_pred             HH--HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          133 DV--QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       133 ~v--~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      ..  ....+.+    .++|++||+||... ..    .+   .+...++|+.++.++++++..    . +..++|++||..
T Consensus        65 ~~~~~~~~~~l----~~~D~Vih~Aa~~~-~~----~~---~~~~~~~nv~gt~~ll~~a~~----~-~~~~~v~~SS~~  127 (657)
T PRK07201         65 LGLSEADIAEL----GDIDHVVHLAAIYD-LT----AD---EEAQRAANVDGTRNVVELAER----L-QAATFHHVSSIA  127 (657)
T ss_pred             CCcCHHHHHHh----cCCCEEEECceeec-CC----CC---HHHHHHHHhHHHHHHHHHHHh----c-CCCeEEEEeccc
Confidence            10  1111222    37999999999743 11    12   245678899999888877543    2 246899998863


Q ss_pred             CCCCC-------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          211 SGGSS-------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       211 ~~~~~-------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      . ...             ......|+.||...+.+.+.      ..|+.+..+.|+.|-.+
T Consensus       128 v-~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        128 V-AGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             c-ccCccCccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence            2 111             11234699999998887752      24789999999998654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.17  E-value=8.7e-11  Score=107.95  Aligned_cols=102  Identities=19%  Similarity=0.244  Sum_probs=79.7

Q ss_pred             eEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGa-s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +=.||.. |||||+++|++|+++|++|+++++...        +..                 . .   ...+|+++.++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-----------------~-~---~~~~Dv~d~~s   66 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-----------------E-P---HPNLSIREIET   66 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-----------------c-c---CCcceeecHHH
Confidence            3445554 679999999999999999999876311        100                 0 0   14589999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHH
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTRE  189 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  189 (388)
                      ++++++.+.+.++++|++|||||+.. ..++.+.+.++|+++   +..+.+++.+.
T Consensus        67 ~~~l~~~v~~~~g~iDiLVnnAgv~d-~~~~~~~s~e~~~~~---~~~~~~~~~~~  118 (227)
T TIGR02114        67 TKDLLITLKELVQEHDILIHSMAVSD-YTPVYMTDLEQVQAS---DNLNEFLSKQN  118 (227)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCEecc-ccchhhCCHHHHhhh---cchhhhhcccc
Confidence            99999999999999999999999876 688899999999977   44566666653

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05865 hypothetical protein; Provisional

Probab=99.17  E-value=6e-10  Score=119.10  Aligned_cols=130  Identities=17%  Similarity=0.215  Sum_probs=99.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||.+++++|+++|++|++++|+....      .                    ...+.++.+|++|.+++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~--------------------~~~v~~v~gDL~D~~~l   55 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W--------------------PSSADFIAADIRDATAV   55 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c--------------------ccCceEEEeeCCCHHHH
Confidence            599999999999999999999999999999975321      0                    12467889999999988


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .++++       ++|++||+|+...   +           .+++|+.++.++++++    ++. +.+++|++||. +   
T Consensus        56 ~~al~-------~vD~VVHlAa~~~---~-----------~~~vNv~GT~nLLeAa----~~~-gvkr~V~iSS~-~---  105 (854)
T PRK05865         56 ESAMT-------GADVVAHCAWVRG---R-----------NDHINIDGTANVLKAM----AET-GTGRIVFTSSG-H---  105 (854)
T ss_pred             HHHHh-------CCCEEEECCCccc---c-----------hHHHHHHHHHHHHHHH----HHc-CCCeEEEECCc-H---
Confidence            87665       5899999998632   1           3578999987776554    444 35689999875 1   


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                                 |.+.+.+.+    +   .++.+..+.|+.+-.|
T Consensus       106 -----------K~aaE~ll~----~---~gl~~vILRp~~VYGP  131 (854)
T PRK05865        106 -----------QPRVEQMLA----D---CGLEWVAVRCALIFGR  131 (854)
T ss_pred             -----------HHHHHHHHH----H---cCCCEEEEEeceEeCC
Confidence                       777666553    2   4789999999988765

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.11  E-value=1.4e-08  Score=86.09  Aligned_cols=202  Identities=14%  Similarity=0.101  Sum_probs=133.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      -++|+|-||-+.+|.+++..|-+++|-|.-++-.+.+-                          .+. -..+..|-+=.+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~--------------------------Ad~-sI~V~~~~swtE   55 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--------------------------ADS-SILVDGNKSWTE   55 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--------------------------ccc-eEEecCCcchhH
Confidence            46789999999999999999999999998777654321                          111 223444544455


Q ss_pred             HHHHHHHHHHhhc--CCccEEEEccccCCCCCCcCCCC-HHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          133 DVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFT-NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       133 ~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +-+.+.+++-+..  .++|.+++-||.-. .+.-..-+ ....+.++.-.+.....-.+.+-.+++    .|-++....+
T Consensus        56 Qe~~v~~~vg~sL~gekvDav~CVAGGWA-GGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK----~GGLL~LtGA  130 (236)
T KOG4022|consen   56 QEQSVLEQVGSSLQGEKVDAVFCVAGGWA-GGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK----PGGLLQLTGA  130 (236)
T ss_pred             HHHHHHHHHHHhhcccccceEEEeecccc-CCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC----CCceeeeccc
Confidence            6666666665544  36999999998643 22211111 123344555555544444454444444    3456677677


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      .+...+.|++..|+.+|+|++.++++|+.+-.  +.|--+.+|.|=..+|||.++..+..+...+.    +-+.+++..+
T Consensus       131 kaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssWT----PL~fi~e~fl  206 (236)
T KOG4022|consen  131 KAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSWT----PLSFISEHFL  206 (236)
T ss_pred             ccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCcc----cHHHHHHHHH
Confidence            67889999999999999999999999998754  46778899999999999987754433222211    2345555555


Q ss_pred             hhh
Q 016493          288 PRI  290 (388)
Q Consensus       288 ~~~  290 (388)
                      +..
T Consensus       207 kWt  209 (236)
T KOG4022|consen  207 KWT  209 (236)
T ss_pred             HHh
Confidence            443

>PLN02778 3,5-epimerase/4-reductase

Probab=99.09  E-value=2.6e-09  Score=102.43  Aligned_cols=133  Identities=15%  Similarity=0.075  Sum_probs=87.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ..+++|||||+|.||..+++.|+++|++|+...+                                         |+.|.
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-----------------------------------------~~~~~   46 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-----------------------------------------RLENR   46 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-----------------------------------------ccCCH
Confidence            3467999999999999999999999999875322                                         23344


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +.+...++.     .++|++||+||....  +-.+...++-...+++|+.++.++++++...     +-..+++.|+...
T Consensus        47 ~~v~~~l~~-----~~~D~ViH~Aa~~~~--~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~v~~sS~~vy  114 (298)
T PLN02778         47 ASLEADIDA-----VKPTHVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCRER-----GLVLTNYATGCIF  114 (298)
T ss_pred             HHHHHHHHh-----cCCCEEEECCcccCC--CCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEecceEe
Confidence            444444332     268999999997541  1111122345678999999999999987542     1224444333211


Q ss_pred             CCC----------------CCCCchhhHHHHHHHHHHHHHHH
Q 016493          212 GGS----------------STPLTAVYGSTKCGLRQLQASLF  237 (388)
Q Consensus       212 ~~~----------------~~~~~~~Y~aSK~al~~l~~~la  237 (388)
                      +..                +.+....|+.||.+.+.+++..+
T Consensus       115 ~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        115 EYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            110                01123579999999999887654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.06  E-value=2.6e-09  Score=99.96  Aligned_cols=127  Identities=22%  Similarity=0.279  Sum_probs=100.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      +||||++|-+|.++++.|. .+++|+.++|.                                      .+|++|++.+.
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~--------------------------------------~~Ditd~~~v~   43 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA--------------------------------------ELDITDPDAVL   43 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc--------------------------------------cccccChHHHH
Confidence            9999999999999999998 66899988773                                      26999999999


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC--CCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA--GSGG  213 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~--~~~~  213 (388)
                      +++++.     ++|++||+|++..     .+.-+.+-+..+.+|..++.++.+++-.      -+..+|.+|+-  ..|.
T Consensus        44 ~~i~~~-----~PDvVIn~AAyt~-----vD~aE~~~e~A~~vNa~~~~~lA~aa~~------~ga~lVhiSTDyVFDG~  107 (281)
T COG1091          44 EVIRET-----RPDVVINAAAYTA-----VDKAESEPELAFAVNATGAENLARAAAE------VGARLVHISTDYVFDGE  107 (281)
T ss_pred             HHHHhh-----CCCEEEECccccc-----cccccCCHHHHHHhHHHHHHHHHHHHHH------hCCeEEEeecceEecCC
Confidence            999987     8999999999854     1223334578999999999999999854      36789999863  1122


Q ss_pred             CC--------CCCchhhHHHHHHHHHHHHHHH
Q 016493          214 SS--------TPLTAVYGSTKCGLRQLQASLF  237 (388)
Q Consensus       214 ~~--------~~~~~~Y~aSK~al~~l~~~la  237 (388)
                      .+        ..+...|+.||.+-+..+++..
T Consensus       108 ~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         108 KGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             CCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence            21        2345789999998888876543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.05  E-value=5.6e-09  Score=100.25  Aligned_cols=175  Identities=24%  Similarity=0.292  Sum_probs=119.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC--
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE--  130 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~--  130 (388)
                      +++++|||||.||..+..+|+.+- ++|++..|-.+. |...++|++...      .....++....++.++..|++.  
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~-E~a~~RL~~~~~------~~~~~~e~~~~ri~vv~gDl~e~~   73 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD-EAALARLEKTFD------LYRHWDELSADRVEVVAGDLAEPD   73 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH-HHHHHHHHHHhh------hhhhhhhhhcceEEEEeccccccc
Confidence            579999999999999999998765 699999885542 222333333221      0112233456899999999994  


Q ss_pred             ----HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          131 ----PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       131 ----~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                          ....+++++       .+|.+|||+......        ..+.+....|+.|+..+++.+.-     ++...+.++
T Consensus        74 lGL~~~~~~~La~-------~vD~I~H~gA~Vn~v--------~pYs~L~~~NVlGT~evlrLa~~-----gk~Kp~~yV  133 (382)
T COG3320          74 LGLSERTWQELAE-------NVDLIIHNAALVNHV--------FPYSELRGANVLGTAEVLRLAAT-----GKPKPLHYV  133 (382)
T ss_pred             CCCCHHHHHHHhh-------hcceEEecchhhccc--------CcHHHhcCcchHhHHHHHHHHhc-----CCCceeEEE
Confidence                334444444       589999999875422        23467788999999999887643     234458889


Q ss_pred             cCCCCCCCCC-------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          207 DGAGSGGSST-------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       207 sS~~~~~~~~-------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ||++......                   .....|+.||.+-+.+++    |-.+.|+++..+.||+|-.+-
T Consensus       134 Ssisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr----~A~~rGLpv~I~Rpg~I~gds  201 (382)
T COG3320         134 SSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVR----EAGDRGLPVTIFRPGYITGDS  201 (382)
T ss_pred             eeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHH----HHhhcCCCeEEEecCeeeccC
Confidence            8874222111                   122579999998777776    444558999999999996543

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.04  E-value=2.4e-09  Score=94.61  Aligned_cols=84  Identities=14%  Similarity=0.175  Sum_probs=71.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+ |+|.++++.|+++|++|++.+|++++.+++...+..                  ..++.++.+|++|++++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~------------------~~~i~~~~~Dv~d~~sv   62 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT------------------PESITPLPLDYHDDDAL   62 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc------------------CCcEEEEEccCCCHHHH
Confidence            68999998 788889999999999999999998776655443321                  24688899999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEcccc
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +++++.+.+.++++|++|+.+-.
T Consensus        63 ~~~i~~~l~~~g~id~lv~~vh~   85 (177)
T PRK08309         63 KLAIKSTIEKNGPFDLAVAWIHS   85 (177)
T ss_pred             HHHHHHHHHHcCCCeEEEEeccc
Confidence            99999999999999999988754

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.04  E-value=1.5e-09  Score=103.40  Aligned_cols=143  Identities=23%  Similarity=0.261  Sum_probs=97.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      ++|||||+|-||.++++.|.++|++|+.+.|+                                      .+|++|.+++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------------------~~dl~d~~~~   43 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS--------------------------------------DLDLTDPEAV   43 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------------------CS-TTSHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------------------hcCCCCHHHH
Confidence            58999999999999999999999999998774                                      3699999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC--CC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SG  212 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~--~~  212 (388)
                      .+++++.     ++|++||+||+..+     +.-.++-+..+++|+.++.++.+.+..      .+.++|++||..  .+
T Consensus        44 ~~~~~~~-----~pd~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~------~~~~li~~STd~VFdG  107 (286)
T PF04321_consen   44 AKLLEAF-----KPDVVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE------RGARLIHISTDYVFDG  107 (286)
T ss_dssp             HHHHHHH-------SEEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH------CT-EEEEEEEGGGS-S
T ss_pred             HHHHHHh-----CCCeEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH------cCCcEEEeeccEEEcC
Confidence            9988876     69999999998531     122234577899999999999988754      357899999851  12


Q ss_pred             CCC--------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          213 GSS--------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       213 ~~~--------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ..+        ..+...|+.+|...+...+.    ..+   +...+.++++-.+
T Consensus       108 ~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~----~~~---~~~IlR~~~~~g~  154 (286)
T PF04321_consen  108 DKGGPYTEDDPPNPLNVYGRSKLEGEQAVRA----ACP---NALILRTSWVYGP  154 (286)
T ss_dssp             STSSSB-TTS----SSHHHHHHHHHHHHHHH----H-S---SEEEEEE-SEESS
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHHHHH----hcC---CEEEEecceeccc
Confidence            111        12346899999988887765    222   3445666666544

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.01  E-value=3.8e-09  Score=102.18  Aligned_cols=172  Identities=15%  Similarity=0.160  Sum_probs=119.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++.+++||||+|.+|+.++++|.++|  .+|.+.+..+..-.- ..+...                ....++.++.+|+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~-~~e~~~----------------~~~~~v~~~~~D~   64 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNL-PAELTG----------------FRSGRVTVILGDL   64 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccccc-chhhhc----------------ccCCceeEEecch
Confidence            367899999999999999999999999  789999987642111 111100                0246789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      .|..++.+.++       +. .+||+|....  .   +.-..+-+..+++|+.|+.+++..+...     +-.++|++||
T Consensus        65 ~~~~~i~~a~~-------~~-~Vvh~aa~~~--~---~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs  126 (361)
T KOG1430|consen   65 LDANSISNAFQ-------GA-VVVHCAASPV--P---DFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSS  126 (361)
T ss_pred             hhhhhhhhhcc-------Cc-eEEEeccccC--c---cccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecC
Confidence            99888877665       45 6666665432  1   2222256789999999988888777553     4567999988


Q ss_pred             CCCCC-----------CCCCC--chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGG-----------SSTPL--TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~-----------~~~~~--~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ..-..           .+.|.  ...|+.||+--+.+++....   ..+....++.|..|-.|--
T Consensus       127 ~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd  188 (361)
T KOG1430|consen  127 AYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGD  188 (361)
T ss_pred             ceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCC
Confidence            63211           12232  24899999977777765543   4467888999988877643

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.97  E-value=2.8e-08  Score=103.15  Aligned_cols=140  Identities=20%  Similarity=0.310  Sum_probs=88.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHH---HHHHHHHHHH-HHhhhhhhcCCCCcccccCceEEE
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSES---VRMTVTELEE-NLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~---~Vil~~R~~~~---l~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ++||+|+||||+|.||..++++|++.+.   +|++..|..+.   .+++.+++.+ ...+......+.........++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4789999999999999999999998763   67888886432   1222122211 000000011111011112357999


Q ss_pred             EEccCCCHH------HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 016493          124 IACDVCEPA------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  197 (388)
Q Consensus       124 ~~~Dls~~~------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  197 (388)
                      +..|+++++      ..+.+.+       .+|++||+|+... .    +   +..+..+++|+.|+.++++.+...    
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~-f----~---~~~~~a~~vNV~GT~nLLelA~~~----  257 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTT-F----D---ERYDVAIDINTRGPCHLMSFAKKC----  257 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccc-c----c---cCHHHHHHHHHHHHHHHHHHHHHc----
Confidence            999999872      3333222       5899999998743 1    1   346778999999999998876542    


Q ss_pred             CCCcEEEEecCC
Q 016493          198 PKGGHIFNMDGA  209 (388)
Q Consensus       198 ~~~g~Iv~isS~  209 (388)
                      ++..++|++||.
T Consensus       258 ~~lk~fV~vSTa  269 (605)
T PLN02503        258 KKLKLFLQVSTA  269 (605)
T ss_pred             CCCCeEEEccCc
Confidence            123468888875

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.97  E-value=1.8e-08  Score=95.65  Aligned_cols=175  Identities=12%  Similarity=0.002  Sum_probs=107.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||||.+|..++++|+++|++|.+..|++++..                          ...+..+.+|+.|++++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------------------~~~~~~~~~d~~d~~~l   54 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------------------GPNEKHVKFDWLDEDTW   54 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------------------CCCCccccccCCCHHHH
Confidence            3899999999999999999999999999999976431                          02345577899999999


Q ss_pred             HHHHHHHHhhcCC-ccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          135 QKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       135 ~~~~~~i~~~~g~-iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      .++++.. +.+.. +|.++++++...        .  ..+            ..+.++..+++. +-.++|++||.. ..
T Consensus        55 ~~a~~~~-~~~~g~~d~v~~~~~~~~--------~--~~~------------~~~~~i~aa~~~-gv~~~V~~Ss~~-~~  109 (285)
T TIGR03649        55 DNPFSSD-DGMEPEISAVYLVAPPIP--------D--LAP------------PMIKFIDFARSK-GVRRFVLLSASI-IE  109 (285)
T ss_pred             HHHHhcc-cCcCCceeEEEEeCCCCC--------C--hhH------------HHHHHHHHHHHc-CCCEEEEeeccc-cC
Confidence            9888643 22335 899999886421        0  001            112344555555 456899998752 22


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccCc-c---c----h-hhhhhhhhccCHHHHH
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGS-T---I----Q-NKQMFNIICELPETVA  283 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~~-~---~----~-~~~~~~~~~~~pe~vA  283 (388)
                      .+.       ..+...+.+.       .. .|+....+.|+++..++..... .   .    . ...-........+++|
T Consensus       110 ~~~-------~~~~~~~~~l-------~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva  175 (285)
T TIGR03649       110 KGG-------PAMGQVHAHL-------DSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIA  175 (285)
T ss_pred             CCC-------chHHHHHHHH-------HhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHH
Confidence            111       1222222222       22 3899999999987655421100 0   0    0 0000112234678888


Q ss_pred             HHHhhhhhhcc
Q 016493          284 RTLVPRIRVVK  294 (388)
Q Consensus       284 ~~~l~~~~~~~  294 (388)
                      +.....+..+.
T Consensus       176 ~~~~~~l~~~~  186 (285)
T TIGR03649       176 RVAYRALTDKV  186 (285)
T ss_pred             HHHHHHhcCCC
Confidence            88877766543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.93  E-value=1.5e-08  Score=96.05  Aligned_cols=157  Identities=18%  Similarity=0.156  Sum_probs=93.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |+||||+|.||.++++.|+++|++|++++|+.++.....                        . ..  ..|+.. ..  
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------------~-~~--~~~~~~-~~--   50 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK------------------------W-EG--YKPWAP-LA--   50 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc------------------------c-ee--eecccc-cc--
Confidence            689999999999999999999999999999876532110                        0 00  112221 11  


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEecCCC-CCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAG-SGG  213 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS~~-~~~  213 (388)
                           ..+.+.++|++||+||....   ....+.+..+..+++|+.++.++++++..    .+. ..+++..|+.. .+.
T Consensus        51 -----~~~~~~~~D~Vvh~a~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~~yg~  118 (292)
T TIGR01777        51 -----ESEALEGADAVINLAGEPIA---DKRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVGYYGT  118 (292)
T ss_pred             -----hhhhcCCCCEEEECCCCCcc---cccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEEEeCC
Confidence                 12233579999999997431   12344556677889999998888777643    221 22344444421 111


Q ss_pred             C---CC-----C-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          214 S---ST-----P-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       214 ~---~~-----~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      .   +.     + ....|+..|...+...+    .+...++.+..+.|+.+-.|
T Consensus       119 ~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~  168 (292)
T TIGR01777       119 SEDRVFTEEDSPAGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP  168 (292)
T ss_pred             CCCCCcCcccCCCCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence            0   10     0 11123333333332222    23345799999999999765

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.87  E-value=7.1e-09  Score=95.46  Aligned_cols=175  Identities=17%  Similarity=0.119  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|++||||-+|--|.-+|+.|+++|+.|..+.|+.....-..-.|.+             .+.....+++.+.+|++|..
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~-------------~~~~~~~~l~l~~gDLtD~~   68 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYE-------------DPHLNDPRLHLHYGDLTDSS   68 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecc-------------ccccCCceeEEEeccccchH
Confidence            69999999999999999999999999999988864332111002211             11123456999999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC-C
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG-S  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~-~  211 (388)
                      ++.++++.+     ++|-+.|-|+.+.     ...+.++-+...+++.+|+++++.++--+ .  ++.-++..-||+. .
T Consensus        69 ~l~r~l~~v-----~PdEIYNLaAQS~-----V~vSFe~P~~T~~~~~iGtlrlLEaiR~~-~--~~~~rfYQAStSE~f  135 (345)
T COG1089          69 NLLRILEEV-----QPDEIYNLAAQSH-----VGVSFEQPEYTADVDAIGTLRLLEAIRIL-G--EKKTRFYQASTSELY  135 (345)
T ss_pred             HHHHHHHhc-----Cchhheecccccc-----ccccccCcceeeeechhHHHHHHHHHHHh-C--CcccEEEecccHHhh
Confidence            999999987     7999999997644     45566667888999999999998875432 2  1245677766542 1


Q ss_pred             C---------CCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecC
Q 016493          212 G---------GSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPG  253 (388)
Q Consensus       212 ~---------~~~~~~~~~Y~aSK~al~~l~~~la~el~---~~gI~vn~v~PG  253 (388)
                      +         ..|..+.+.|+++|..-.-.+...+..+.   -.||-+|.=+|.
T Consensus       136 G~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         136 GLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             cCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence            1         13445668899999988888888887764   357777766664

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.83  E-value=8.9e-08  Score=101.84  Aligned_cols=142  Identities=14%  Similarity=0.097  Sum_probs=96.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+++|||||+|-||.++++.|.++|++|...                                         ..|++|.+
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------------------~~~l~d~~  418 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------------------KGRLEDRS  418 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------------------------ccccccHH
Confidence            3579999999999999999999999987321                                         12577777


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC-C
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG-S  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~-~  211 (388)
                      .+.+.++..     ++|++||+|+...  .+-.+...++-+..+++|+.++.++++++...      +.+.+++||.. .
T Consensus       419 ~v~~~i~~~-----~pd~Vih~Aa~~~--~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~  485 (668)
T PLN02260        419 SLLADIRNV-----KPTHVFNAAGVTG--RPNVDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIF  485 (668)
T ss_pred             HHHHHHHhh-----CCCEEEECCcccC--CCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEccccee
Confidence            777766543     6899999999753  11122333455788999999999999988542      22455555431 1


Q ss_pred             CC---------CCC-------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 016493          212 GG---------SST-------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  251 (388)
Q Consensus       212 ~~---------~~~-------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~  251 (388)
                      +.         .+.       +....|+.||.+.+.+++....   -..+|+..+.
T Consensus       486 ~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        486 EYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             cCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence            11         011       2236799999999998876542   2346666555

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.83  E-value=1.2e-07  Score=108.67  Aligned_cols=179  Identities=17%  Similarity=0.168  Sum_probs=114.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++|+||||+|.||..++++|+++|    ++|+...|+....+. .+.+.+.....     +. .......++.++..|+
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~-----~~-~~~~~~~~i~~~~gDl 1043 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTY-----GI-WDEEWASRIEVVLGDL 1043 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHh-----CC-CchhhhcceEEEeccC
Confidence            5899999999999999999999987    789999997544322 22332211110     00 0001123688999999


Q ss_pred             CCHHHH--HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          129 CEPADV--QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       129 s~~~~v--~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      +++.--  ....+++.   ..+|++||||+...     ...+   ++.....|+.|+.++++.+..    . +..+++++
T Consensus      1044 ~~~~lgl~~~~~~~l~---~~~d~iiH~Aa~~~-----~~~~---~~~~~~~nv~gt~~ll~~a~~----~-~~~~~v~v 1107 (1389)
T TIGR03443      1044 SKEKFGLSDEKWSDLT---NEVDVIIHNGALVH-----WVYP---YSKLRDANVIGTINVLNLCAE----G-KAKQFSFV 1107 (1389)
T ss_pred             CCccCCcCHHHHHHHH---hcCCEEEECCcEec-----CccC---HHHHHHhHHHHHHHHHHHHHh----C-CCceEEEE
Confidence            864200  11122222   36899999998743     1112   344556799999999887643    2 34579999


Q ss_pred             cCCCCCCC----------------CC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          207 DGAGSGGS----------------ST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       207 sS~~~~~~----------------~~-----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ||......                +.           .....|+.||.+.+.+++..+.    .|+.+..+.||.|-.+
T Consensus      1108 SS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1108 SSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred             eCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccC
Confidence            98522100                00           0123599999998888876432    4899999999999655

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.75  E-value=3.9e-08  Score=97.46  Aligned_cols=82  Identities=24%  Similarity=0.321  Sum_probs=63.5

Q ss_pred             CCCCCeEEEEcC---------------CCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCc
Q 016493           50 KAGPRNVVITGS---------------TRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK  113 (388)
Q Consensus        50 ~~~gk~vlITGa---------------s~G-IG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  113 (388)
                      +++||+++||||               |+| +|+++|++|+++|++|++++++.+ ++                      
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~----------------------  241 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP----------------------  241 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc----------------------
Confidence            578999999999               455 999999999999999999998752 10                      


Q ss_pred             ccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC
Q 016493          114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP  163 (388)
Q Consensus       114 ~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~  163 (388)
                         ....  ...+|+++.+++.+.++   +.++++|++|||||+.. +.+
T Consensus       242 ---~~~~--~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d-~~~  282 (399)
T PRK05579        242 ---TPAG--VKRIDVESAQEMLDAVL---AALPQADIFIMAAAVAD-YRP  282 (399)
T ss_pred             ---CCCC--cEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccc-ccc
Confidence               0011  24679999888776665   55789999999999865 444

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.69  E-value=1.1e-07  Score=87.54  Aligned_cols=159  Identities=19%  Similarity=0.202  Sum_probs=94.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      ++||||+|-||++++.+|.+.|++|+++.|++.+.++.                           ...   .+...+.+.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~---------------------------~~~---~v~~~~~~~   50 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN---------------------------LHP---NVTLWEGLA   50 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh---------------------------cCc---cccccchhh
Confidence            58999999999999999999999999999998764321                           110   111112222


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  215 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  215 (388)
                      ...+      .++|++||-||.... .  ...+.+.=+..++    +-+..++.+.....+...+.++..-.|+ .++.+
T Consensus        51 ~~~~------~~~DavINLAG~~I~-~--rrWt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSA-vGyYG  116 (297)
T COG1090          51 DALT------LGIDAVINLAGEPIA-E--RRWTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASA-VGYYG  116 (297)
T ss_pred             hccc------CCCCEEEECCCCccc-c--ccCCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecce-EEEec
Confidence            2111      169999999997441 1  2256666566655    4445556656555544333444333343 45555


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHh-------CCCCeEEEEEecCccccc
Q 016493          216 TPLTAVYGSTKCGLRQLQASLFKES-------KRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       216 ~~~~~~Y~aSK~al~~l~~~la~el-------~~~gI~vn~v~PG~v~T~  258 (388)
                      ......|--....-..|...++++|       ...|+||..+.-|.|-.+
T Consensus       117 ~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~  166 (297)
T COG1090         117 HSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSP  166 (297)
T ss_pred             CCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecC
Confidence            4444333332222233333333333       346899999999999764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.64  E-value=1.8e-07  Score=89.31  Aligned_cols=85  Identities=14%  Similarity=0.239  Sum_probs=64.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCh---HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~---~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      .++++|+++|||| ||+|++++..|++.|++ |++++|+.   ++++++.+++.+.                 ...+...
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-----------------~~~~~~~  183 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-----------------VPECIVN  183 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-----------------CCCceeE
Confidence            3578999999999 69999999999999986 99999997   6676666665431                 2334556


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      .+|+++.+++++.++       ..|+||||..+.
T Consensus       184 ~~d~~~~~~~~~~~~-------~~DilINaTp~G  210 (289)
T PRK12548        184 VYDLNDTEKLKAEIA-------SSDILVNATLVG  210 (289)
T ss_pred             EechhhhhHHHhhhc-------cCCEEEEeCCCC
Confidence            788888777655433       469999998664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.63  E-value=2.1e-07  Score=94.30  Aligned_cols=129  Identities=13%  Similarity=0.076  Sum_probs=88.2

Q ss_pred             CCeEE----EEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           53 PRNVV----ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        53 gk~vl----ITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |..++    |+||++|+|.++++.|...|+.|+.+.+...+...                                    
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------------------------------------   77 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------------------------------------   77 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc------------------------------------
Confidence            45666    88999999999999999999999987665431100                                    


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                                    ....+++.++.-+-..        .+.+++.        +.+.+++..++.|.   ..|+||+++|
T Consensus        78 --------------~~~~~~~~~~~d~~~~--------~~~~~l~--------~~~~~~~~~l~~l~---~~griv~i~s  124 (450)
T PRK08261         78 --------------GWGDRFGALVFDATGI--------TDPADLK--------ALYEFFHPVLRSLA---PCGRVVVLGR  124 (450)
T ss_pred             --------------CcCCcccEEEEECCCC--------CCHHHHH--------HHHHHHHHHHHhcc---CCCEEEEEcc
Confidence                          0001344333322110        1122222        33456677777775   3579999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV  255 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v  255 (388)
                      . ...   .....|+++|+++.++++++++|+ +.+|++|+|.|+..
T Consensus       125 ~-~~~---~~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~~  166 (450)
T PRK08261        125 P-PEA---AADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAPG  166 (450)
T ss_pred             c-ccc---CCchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCCC
Confidence            6 332   234579999999999999999999 77999999999863

>PLN00016 RNA-binding protein; Provisional

Probab=98.63  E-value=3.9e-07  Score=90.23  Aligned_cols=154  Identities=16%  Similarity=0.151  Sum_probs=93.1

Q ss_pred             CCCCeEEEE----cCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           51 AGPRNVVIT----GSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        51 ~~gk~vlIT----Gas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ...++|+||    ||+|.||..++++|+++|++|++++|+.+........-...+.+            .....+.++.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~------------l~~~~v~~v~~  117 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSE------------LSSAGVKTVWG  117 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhH------------hhhcCceEEEe
Confidence            345789999    99999999999999999999999999876432211000000000            00123777888


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |+.|   +.+++.     ..++|++|+++|..          .+           +    ++.++..+++. +-.++|++
T Consensus       118 D~~d---~~~~~~-----~~~~d~Vi~~~~~~----------~~-----------~----~~~ll~aa~~~-gvkr~V~~  163 (378)
T PLN00016        118 DPAD---VKSKVA-----GAGFDVVYDNNGKD----------LD-----------E----VEPVADWAKSP-GLKQFLFC  163 (378)
T ss_pred             cHHH---HHhhhc-----cCCccEEEeCCCCC----------HH-----------H----HHHHHHHHHHc-CCCEEEEE
Confidence            8876   333221     13689999987531          11           1    22333444444 35689999


Q ss_pred             cCCCCCCCCCC--C------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          207 DGAGSGGSSTP--L------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       207 sS~~~~~~~~~--~------~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ||.. .+....  +      ...+. +|...+.+.+       ..++.+..+.|+.+-.|.
T Consensus       164 SS~~-vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        164 SSAG-VYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             ccHh-hcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCC
Confidence            9863 221111  0      01122 7877776543       247899999999887664

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.58  E-value=4.6e-06  Score=84.19  Aligned_cols=197  Identities=16%  Similarity=0.121  Sum_probs=128.2

Q ss_pred             cccCCCCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           47 EHCKAGPRNVVITGST-RGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        47 ~~~~~~gk~vlITGas-~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      +...+.+|++|||||+ +.||.+++.+|++.|++||++..+- ++-.+..+.|-..+..             .+..+.++
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~-------------~ga~LwvV  456 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHAR-------------YGAALWVV  456 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCC-------------CCceEEEE
Confidence            4567889999999998 6799999999999999999986553 3344455555544332             45778899


Q ss_pred             EccCCCHHHHHHHHHHHHhhcC--------------CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHH
Q 016493          125 ACDVCEPADVQKLSNFAVNEFG--------------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREA  190 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g--------------~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  190 (388)
                      ..++.++.+|+.+++.|-++..              .+|.++--|.... .+.+.+..+. -+..+++-+....+++-.+
T Consensus       457 paN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsr-aE~~~rilLw~V~Rliggl  534 (866)
T COG4982         457 PANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSR-AEFAMRILLWNVLRLIGGL  534 (866)
T ss_pred             eccccchhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCc-cCccccCCch-HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999965422              2677777776654 4555555442 2444555555555554443


Q ss_pred             HHHHHcCC--CCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCccc-ccccc
Q 016493          191 MRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVL-TDLLL  261 (388)
Q Consensus       191 lp~m~~~~--~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el--~~~gI~vn~v~PG~v~-T~~~~  261 (388)
                      .+.-..++  .+-++|.=.|...+..  .+-.+|+-||++++.+..-+..|-  +. -+.+..-.-|+++ |.++.
T Consensus       535 ~~~~s~r~v~~R~hVVLPgSPNrG~F--GgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg  607 (866)
T COG4982         535 KKQGSSRGVDTRLHVVLPGSPNRGMF--GGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMG  607 (866)
T ss_pred             hhhccccCcccceEEEecCCCCCCcc--CCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccC
Confidence            33222221  1235555555533433  345789999999999987666553  22 1334344457775 55543

>PRK12320 hypothetical protein; Provisional

Probab=98.58  E-value=5.1e-07  Score=94.99  Aligned_cols=134  Identities=16%  Similarity=0.292  Sum_probs=90.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|.||..++++|+++|++|++++|+....                          ....+.++.+|++|.. +
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------------------------~~~~ve~v~~Dl~d~~-l   54 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------------------------LDPRVDYVCASLRNPV-L   54 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------------------------ccCCceEEEccCCCHH-H
Confidence            599999999999999999999999999999864321                          1135778999999973 3


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .+++       .++|++||+|+... .      .      ..++|+.++.++++++.    +.  +.++|++||. .+  
T Consensus        55 ~~al-------~~~D~VIHLAa~~~-~------~------~~~vNv~Gt~nLleAA~----~~--GvRiV~~SS~-~G--  105 (699)
T PRK12320         55 QELA-------GEADAVIHLAPVDT-S------A------PGGVGITGLAHVANAAA----RA--GARLLFVSQA-AG--  105 (699)
T ss_pred             HHHh-------cCCCEEEEcCccCc-c------c------hhhHHHHHHHHHHHHHH----Hc--CCeEEEEECC-CC--
Confidence            3322       26899999998632 1      1      11478889988888763    33  2479999875 22  


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                       .+  ..|..        .+.+..+   .++.+..+.|+.+-.|
T Consensus       106 -~~--~~~~~--------aE~ll~~---~~~p~~ILR~~nVYGp  135 (699)
T PRK12320        106 -RP--ELYRQ--------AETLVST---GWAPSLVIRIAPPVGR  135 (699)
T ss_pred             -CC--ccccH--------HHHHHHh---cCCCEEEEeCceecCC
Confidence             11  12321        2222222   2467788888877666

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.58  E-value=6.1e-07  Score=80.45  Aligned_cols=85  Identities=18%  Similarity=0.189  Sum_probs=67.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..++++++++|+||+|++|+++++.|+++|++|++++|+.+++++..+++.+..                  ......+|
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~------------------~~~~~~~~   84 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF------------------GEGVGAVE   84 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc------------------CCcEEEee
Confidence            357889999999999999999999999999999999999998887777664321                  12345678


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      ..+.+++.+.++       +.|++|++...
T Consensus        85 ~~~~~~~~~~~~-------~~diVi~at~~  107 (194)
T cd01078          85 TSDDAARAAAIK-------GADVVFAAGAA  107 (194)
T ss_pred             CCCHHHHHHHHh-------cCCEEEECCCC
Confidence            888888766554       57988887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.54  E-value=1e-06  Score=81.33  Aligned_cols=169  Identities=18%  Similarity=0.196  Sum_probs=113.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .....+++++||||+|.||..+|.+|..+|+.||+.+--...-........                  ....+..+.-|
T Consensus        22 ~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~------------------~~~~fel~~hd   83 (350)
T KOG1429|consen   22 VKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI------------------GHPNFELIRHD   83 (350)
T ss_pred             ccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc------------------cCcceeEEEee
Confidence            456778999999999999999999999999999998864333221111111                  12456666667


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +..+     ++.       .+|.++|-|....|..  ...++   .+++.+|++++.+++..+...      +.|++..|
T Consensus        84 v~~p-----l~~-------evD~IyhLAapasp~~--y~~np---vktIktN~igtln~lglakrv------~aR~l~aS  140 (350)
T KOG1429|consen   84 VVEP-----LLK-------EVDQIYHLAAPASPPH--YKYNP---VKTIKTNVIGTLNMLGLAKRV------GARFLLAS  140 (350)
T ss_pred             chhH-----HHH-------HhhhhhhhccCCCCcc--cccCc---cceeeecchhhHHHHHHHHHh------CceEEEee
Confidence            6554     333       4788899998765322  22222   467889999999998887553      35788777


Q ss_pred             CCCC-CC--------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          208 GAGS-GG--------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       208 S~~~-~~--------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ++.- +.              .+....+.|...|...+.|+....++   .||.|....+-.+-.|.+
T Consensus       141 TseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  141 TSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRM  205 (350)
T ss_pred             cccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCcc
Confidence            6521 11              12234578999999888888766654   478777777655555543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.53  E-value=3.5e-07  Score=84.25  Aligned_cols=100  Identities=21%  Similarity=0.279  Sum_probs=69.5

Q ss_pred             CeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~G-IG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+-.||+.|+| ||.++|++|+++|++|++++|+....        ..                ....+.++.++     
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~----------------~~~~v~~i~v~-----   66 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE----------------PHPNLSIIEIE-----   66 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC----------------CCCCeEEEEEe-----
Confidence            36677877665 99999999999999999998764210        00                01234445432     


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHH
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS  183 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~  183 (388)
                      +.+++.+.+.+.++++|++|||||+.. +.+....+.+++..++++|.+..
T Consensus        67 s~~~m~~~l~~~~~~~DivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         67 NVDDLLETLEPLVKDHDVLIHSMAVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             cHHHHHHHHHHHhcCCCEEEeCCccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence            233333344444567999999999976 66777788899999999987654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.50  E-value=4.1e-07  Score=89.93  Aligned_cols=110  Identities=23%  Similarity=0.254  Sum_probs=75.2

Q ss_pred             CCCCCeEEEEcC---------------CCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCc
Q 016493           50 KAGPRNVVITGS---------------TRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK  113 (388)
Q Consensus        50 ~~~gk~vlITGa---------------s~G-IG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  113 (388)
                      +++||+++||||               |+| +|.++|++|+++|++|+++.++....                       
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------------------  238 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------------------  238 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------------------
Confidence            478999999999               667 99999999999999999988764320                       


Q ss_pred             ccccCceEEEEEccCCCHHHH-HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCC--HHHHHHHHHhhchHHHHHHHHH
Q 016493          114 KNLVHAKVAGIACDVCEPADV-QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT--NEEIEQIVSTNLVGSILCTREA  190 (388)
Q Consensus       114 ~~~~~~~i~~~~~Dls~~~~v-~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~--~~~~~~~~~vN~~g~~~l~~~~  190 (388)
                         .+..+  ..+|+++.+++ +++.++   .++++|++|+|||+.. +.+....+  ....+..+.+|+...--+++.+
T Consensus       239 ---~~~~~--~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd-~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       239 ---TPPGV--KSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVAD-FKPKTVFEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             ---CCCCc--EEEEeccHHHHHHHHHHh---hcccCCEEEEcccccc-ccccccccccccccCCceeEEEEeCcHHHHHH
Confidence               11122  46799998888 555544   3468999999999976 45443221  1111223556776666555554


Q ss_pred             H
Q 016493          191 M  191 (388)
Q Consensus       191 l  191 (388)
                      -
T Consensus       310 ~  310 (390)
T TIGR00521       310 R  310 (390)
T ss_pred             H
Confidence            3

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.44  E-value=8e-06  Score=75.11  Aligned_cols=182  Identities=15%  Similarity=0.172  Sum_probs=106.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |+||||+|.+|+.+++.|++.|++|.+..|+..+.  ..+++++                   ..++++.+|+.|.+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~--~~~~l~~-------------------~g~~vv~~d~~~~~~l~   59 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD--RAQQLQA-------------------LGAEVVEADYDDPESLV   59 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH--HHHHHHH-------------------TTTEEEES-TT-HHHHH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh--hhhhhhc-------------------ccceEeecccCCHHHHH
Confidence            68999999999999999999999999999998432  2233333                   23456799999999888


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  215 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  215 (388)
                      ++++       ++|.++++.+...      +..           .....++++++...     +-.++|. ||.......
T Consensus        60 ~al~-------g~d~v~~~~~~~~------~~~-----------~~~~~~li~Aa~~a-----gVk~~v~-ss~~~~~~~  109 (233)
T PF05368_consen   60 AALK-------GVDAVFSVTPPSH------PSE-----------LEQQKNLIDAAKAA-----GVKHFVP-SSFGADYDE  109 (233)
T ss_dssp             HHHT-------TCSEEEEESSCSC------CCH-----------HHHHHHHHHHHHHH-----T-SEEEE-SEESSGTTT
T ss_pred             HHHc-------CCceEEeecCcch------hhh-----------hhhhhhHHHhhhcc-----ccceEEE-EEecccccc
Confidence            7776       7899999887532      111           11223344444432     2456764 444232211


Q ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc---ch-h-------hh-hhhhhcc-C
Q 016493          216 ----TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST---IQ-N-------KQ-MFNIICE-L  278 (388)
Q Consensus       216 ----~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~---~~-~-------~~-~~~~~~~-~  278 (388)
                          .|....| ..|..++.+.+..       ++..+.|.||+....+......   .. .       .. -.+.... +
T Consensus       110 ~~~~~p~~~~~-~~k~~ie~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (233)
T PF05368_consen  110 SSGSEPEIPHF-DQKAEIEEYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTD  181 (233)
T ss_dssp             TTTSTTHHHHH-HHHHHHHHHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEH
T ss_pred             cccccccchhh-hhhhhhhhhhhhc-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCcccccccc
Confidence                1222233 4677665544332       7999999999876544321110   00 0       00 0011222 5


Q ss_pred             HHHHHHHHhhhhhhcccc
Q 016493          279 PETVARTLVPRIRVVKGS  296 (388)
Q Consensus       279 pe~vA~~~l~~~~~~~~~  296 (388)
                      .+++++.....+..|+..
T Consensus       182 ~~Dvg~~va~il~~p~~~  199 (233)
T PF05368_consen  182 TRDVGRAVAAILLDPEKH  199 (233)
T ss_dssp             HHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcChHHh
Confidence            677777777666666554

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.35  E-value=7.7e-06  Score=81.66  Aligned_cols=140  Identities=23%  Similarity=0.276  Sum_probs=88.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChH---HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G---~~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      +++|+++||||+|.+|+-+..+|++.-   -++++.-|.+.   .-+++..+..+...+..+...+.     .-.++..+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~-----~l~Kv~pi   84 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPE-----ALEKVVPI   84 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcc-----ceecceec
Confidence            478999999999999999999999754   26677666432   22222222222222222222111     23578889


Q ss_pred             EccCCCHHH-HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          125 ACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       125 ~~Dls~~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      ..|+++++- +..--.+.  ....+|++||+|+... +       .|.++..+.+|..|+.++.+.+....+    -...
T Consensus        85 ~GDi~~~~LGis~~D~~~--l~~eV~ivih~AAtvr-F-------de~l~~al~iNt~Gt~~~l~lak~~~~----l~~~  150 (467)
T KOG1221|consen   85 AGDISEPDLGISESDLRT--LADEVNIVIHSAATVR-F-------DEPLDVALGINTRGTRNVLQLAKEMVK----LKAL  150 (467)
T ss_pred             cccccCcccCCChHHHHH--HHhcCCEEEEeeeeec-c-------chhhhhhhhhhhHhHHHHHHHHHHhhh----hheE
Confidence            999987542 11111111  1127999999998744 1       356788899999999999998766543    2357


Q ss_pred             EEecCC
Q 016493          204 FNMDGA  209 (388)
Q Consensus       204 v~isS~  209 (388)
                      +.+|++
T Consensus       151 vhVSTA  156 (467)
T KOG1221|consen  151 VHVSTA  156 (467)
T ss_pred             EEeehh
Confidence            777765

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.34  E-value=2.8e-06  Score=90.56  Aligned_cols=168  Identities=15%  Similarity=0.204  Sum_probs=130.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ..|..+|+||=||.|+++|+.|..+|+ ++++++|+--+-.--..-++ ....             .+.++.+-.-|++.
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vr-rWr~-------------~GVqV~vsT~nitt 1832 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVR-RWRR-------------RGVQVQVSTSNITT 1832 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHH-HHHh-------------cCeEEEEecccchh
Confidence            458999999999999999999999998 58899997544322111111 1111             45677777889999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .+..++++++. .+.+.+..++|-|.+.. .+.+++++++.++..-+-.+.|++++-+.-...-.   .-..+|..||. 
T Consensus      1833 ~~ga~~Li~~s-~kl~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~---~LdyFv~FSSv- 1906 (2376)
T KOG1202|consen 1833 AEGARGLIEES-NKLGPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP---ELDYFVVFSSV- 1906 (2376)
T ss_pred             hhhHHHHHHHh-hhcccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCc---ccceEEEEEee-
Confidence            99999999877 45688999999999887 68899999999999999999999987655432211   22467788887 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKE  239 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~e  239 (388)
                      +...+..+...|+-+.++++-+++.-+.+
T Consensus      1907 scGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1907 SCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             cccCCCCcccccchhhHHHHHHHHHhhhc
Confidence            56678888999999999999999765543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.22  E-value=6.2e-06  Score=76.30  Aligned_cols=170  Identities=15%  Similarity=0.100  Sum_probs=116.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCC---hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +.|.++||||.+.||...+..+...=  ++.+..+.=   .. +. ..++.+                  ..++..+++.
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~-~l~~~~------------------n~p~ykfv~~   64 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LK-NLEPVR------------------NSPNYKFVEG   64 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cc-hhhhhc------------------cCCCceEeec
Confidence            34899999999999999999988763  455544321   11 11 111111                  3477899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |+.+...+..++..     .++|.++|-|.....     +.+.-+--..++.|++++..+++...-..    +-.++|.+
T Consensus        65 di~~~~~~~~~~~~-----~~id~vihfaa~t~v-----d~s~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhv  130 (331)
T KOG0747|consen   65 DIADADLVLYLFET-----EEIDTVIHFAAQTHV-----DRSFGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHV  130 (331)
T ss_pred             cccchHHHHhhhcc-----CchhhhhhhHhhhhh-----hhhcCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEe
Confidence            99998888776653     389999999987541     12222234567889999999988875543    34578999


Q ss_pred             cCCC-CCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          207 DGAG-SGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       207 sS~~-~~~~----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      |+-. .|..          ...+...|++||+|.+++.+++.+.+   |+-|..+.-+-|-.|
T Consensus       131 STdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP  190 (331)
T KOG0747|consen  131 STDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGP  190 (331)
T ss_pred             cccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCC
Confidence            8641 1110          11234579999999999999999887   577777777766665

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.19  E-value=3.5e-05  Score=75.82  Aligned_cols=177  Identities=18%  Similarity=0.138  Sum_probs=107.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .-+.+..+|+|+||+|++|+-+++.|.++|+.|.++.|+.++.+.... +..                 .......+..|
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~-----------------~d~~~~~v~~~  135 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFF-----------------VDLGLQNVEAD  135 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccc-----------------cccccceeeec
Confidence            345667899999999999999999999999999999999888766544 100                 12334445556


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      .....++.....+...  -..++++.++|..+. .. +..++      ..|.+.|..+++.++...     +-.|++.++
T Consensus       136 ~~~~~d~~~~~~~~~~--~~~~~v~~~~ggrp~-~e-d~~~p------~~VD~~g~knlvdA~~~a-----Gvk~~vlv~  200 (411)
T KOG1203|consen  136 VVTAIDILKKLVEAVP--KGVVIVIKGAGGRPE-EE-DIVTP------EKVDYEGTKNLVDACKKA-----GVKRVVLVG  200 (411)
T ss_pred             cccccchhhhhhhhcc--ccceeEEecccCCCC-cc-cCCCc------ceecHHHHHHHHHHHHHh-----CCceEEEEE
Confidence            6555444332222211  125677777776431 11 11222      245567888888877332     345799998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHH-HHHHHHhCCCCeEEEEEecCccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQ-ASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~-~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      |+.......+.+..+.   .+...-. +....++...|+.-..|.||....+..
T Consensus       201 si~~~~~~~~~~~~~~---~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~  251 (411)
T KOG1203|consen  201 SIGGTKFNQPPNILLL---NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTG  251 (411)
T ss_pred             eecCcccCCCchhhhh---hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCC
Confidence            8743333333333332   1111111 234445667788889999998876543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.13  E-value=7e-05  Score=69.49  Aligned_cols=210  Identities=13%  Similarity=0.109  Sum_probs=134.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      -++.|-++-|-||+|.+|+-++.+|++.|-+||+--|-.+.--   .+++- ..              .-+++.++..|+
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkv-mG--------------dLGQvl~~~fd~  118 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKV-MG--------------DLGQVLFMKFDL  118 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheee-cc--------------cccceeeeccCC
Confidence            4567788999999999999999999999999999988544311   11110 00              126799999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      .|+++++++++.       -+++||-.|--.+.+   ..+      .-++|+.++-.+.+.+-..     +--+.|.+|+
T Consensus       119 ~DedSIr~vvk~-------sNVVINLIGrd~eTk---nf~------f~Dvn~~~aerlAricke~-----GVerfIhvS~  177 (391)
T KOG2865|consen  119 RDEDSIRAVVKH-------SNVVINLIGRDYETK---NFS------FEDVNVHIAERLARICKEA-----GVERFIHVSC  177 (391)
T ss_pred             CCHHHHHHHHHh-------CcEEEEeeccccccC---Ccc------cccccchHHHHHHHHHHhh-----Chhheeehhh
Confidence            999999998874       479999999754222   222      2356777776666655332     3446889987


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhh--h-----------
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI--I-----------  275 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~-----------  275 (388)
                      .++.   ....+-|=-||++-+--+   +.++..    .+.|.|..|-...-+ ........+.++  +           
T Consensus       178 Lgan---v~s~Sr~LrsK~~gE~aV---rdafPe----AtIirPa~iyG~eDr-fln~ya~~~rk~~~~pL~~~GekT~K  246 (391)
T KOG2865|consen  178 LGAN---VKSPSRMLRSKAAGEEAV---RDAFPE----ATIIRPADIYGTEDR-FLNYYASFWRKFGFLPLIGKGEKTVK  246 (391)
T ss_pred             cccc---ccChHHHHHhhhhhHHHH---HhhCCc----ceeechhhhcccchh-HHHHHHHHHHhcCceeeecCCcceee
Confidence            6422   334456777887665533   334443    345677666432110 000011111110  0           


Q ss_pred             -ccCHHHHHHHHhhhhhhccccccceeeccCHHH
Q 016493          276 -CELPETVARTLVPRIRVVKGSGKAINYLTPPRI  308 (388)
Q Consensus       276 -~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~  308 (388)
                       ..-.-+||..++.++.+|+..+++..|..++.-
T Consensus       247 ~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~y  280 (391)
T KOG2865|consen  247 QPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRY  280 (391)
T ss_pred             ccEEEehHHHHHHHhccCccccCceeeecCCchh
Confidence             011347999999999999888888888777754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.13  E-value=1.4e-05  Score=78.42  Aligned_cols=77  Identities=23%  Similarity=0.360  Sum_probs=65.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +.+||.|| |++|+.+|..|+++| .+|.+++|+.++++++....                    ..++.+.++|+.|.+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--------------------~~~v~~~~vD~~d~~   60 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--------------------GGKVEALQVDAADVD   60 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--------------------cccceeEEecccChH
Confidence            67899998 999999999999999 89999999999887765542                    247899999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      .+.+++++       .|++||++...
T Consensus        61 al~~li~~-------~d~VIn~~p~~   79 (389)
T COG1748          61 ALVALIKD-------FDLVINAAPPF   79 (389)
T ss_pred             HHHHHHhc-------CCEEEEeCCch
Confidence            88887763       39999999753

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.10  E-value=1.3e-05  Score=81.17  Aligned_cols=78  Identities=18%  Similarity=0.289  Sum_probs=58.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++.+++. +.+++..+++.+                   ..+.++..|.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~   61 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-------------------LGIELVLGEY   61 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-------------------cCCEEEeCCc
Confidence            56899999999877 99999999999999999999985 344444444432                   2345677777


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                      .+            +..+++|++|+++|+..
T Consensus        62 ~~------------~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         62 PE------------EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             ch------------hHhhcCCEEEECCCCCC
Confidence            76            11247999999999743

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.02  E-value=2.5e-05  Score=65.84  Aligned_cols=48  Identities=19%  Similarity=0.379  Sum_probs=43.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTEL   97 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~~~~~l   97 (388)
                      -++++|+++|.|+ ||.|+++++.|+++|++ |.++.|+.++++++.+++
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            3789999999997 99999999999999986 999999999998887776

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.98  E-value=0.00016  Score=67.62  Aligned_cols=131  Identities=17%  Similarity=0.172  Sum_probs=88.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      .++||||||.+|.+++++|.++|++|.+..|+++++....                        ..+.+...|+.+++++
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------------------~~v~~~~~d~~~~~~l   57 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------------------GGVEVVLGDLRDPKSL   57 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------------------CCcEEEEeccCCHhHH
Confidence            6899999999999999999999999999999998775432                        3577889999999998


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      ...++       ++|.+++..+... ...    ..      ............+..-      ....+++.+|.. ... 
T Consensus        58 ~~a~~-------G~~~~~~i~~~~~-~~~----~~------~~~~~~~~~~~a~~a~------~~~~~~~~~s~~-~~~-  111 (275)
T COG0702          58 VAGAK-------GVDGVLLISGLLD-GSD----AF------RAVQVTAVVRAAEAAG------AGVKHGVSLSVL-GAD-  111 (275)
T ss_pred             HHHhc-------cccEEEEEecccc-ccc----ch------hHHHHHHHHHHHHHhc------CCceEEEEeccC-CCC-
Confidence            87766       6788888887632 111    01      1111222333333321      123456666554 221 


Q ss_pred             CCCCchhhHHHHHHHHHHHHHH
Q 016493          215 STPLTAVYGSTKCGLRQLQASL  236 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~l  236 (388)
                       ......|..+|...+...++.
T Consensus       112 -~~~~~~~~~~~~~~e~~l~~s  132 (275)
T COG0702         112 -AASPSALARAKAAVEAALRSS  132 (275)
T ss_pred             -CCCccHHHHHHHHHHHHHHhc
Confidence             134568999999888766543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.97  E-value=3.1e-05  Score=76.92  Aligned_cols=75  Identities=29%  Similarity=0.466  Sum_probs=58.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-C-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG-D-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G-~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+|.|| |.+|+.+++.|++++ . +|++++|+.++++++.+++                   ...++..+++|+.|.++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------------------~~~~~~~~~~d~~~~~~   60 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------------------LGDRVEAVQVDVNDPES   60 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------------------TTTTEEEEE--TTTHHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------------------cccceeEEEEecCCHHH
Confidence            689999 999999999999998 4 8999999999988776654                   13679999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEcccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      ++++++       +.|++||++|.
T Consensus        61 l~~~~~-------~~dvVin~~gp   77 (386)
T PF03435_consen   61 LAELLR-------GCDVVINCAGP   77 (386)
T ss_dssp             HHHHHT-------TSSEEEE-SSG
T ss_pred             HHHHHh-------cCCEEEECCcc
Confidence            888766       46999999986

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.90  E-value=0.00082  Score=58.73  Aligned_cols=188  Identities=16%  Similarity=0.146  Sum_probs=113.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      .+.|.||||-.|..++++..++|+.|..+.||++++.+.                         ..+..++.|+.|++++
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------------------~~~~i~q~Difd~~~~   56 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------------------QGVTILQKDIFDLTSL   56 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------------------ccceeecccccChhhh
Confidence            467899999999999999999999999999999876432                         3466789999999988


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG-  213 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~-  213 (388)
                      .+.+.       +.|++|..-|...+       +.+.  ...        ...+.++..++.. ...|++.+.++++-. 
T Consensus        57 a~~l~-------g~DaVIsA~~~~~~-------~~~~--~~~--------k~~~~li~~l~~a-gv~RllVVGGAGSL~i  111 (211)
T COG2910          57 ASDLA-------GHDAVISAFGAGAS-------DNDE--LHS--------KSIEALIEALKGA-GVPRLLVVGGAGSLEI  111 (211)
T ss_pred             Hhhhc-------CCceEEEeccCCCC-------ChhH--HHH--------HHHHHHHHHHhhc-CCeeEEEEcCccceEE
Confidence            55443       68999998876421       1111  111        1134455555554 467888887763211 


Q ss_pred             ------CCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchh--hhh---hhhhccCHHH
Q 016493          214 ------SSTPLT-AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN--KQM---FNIICELPET  281 (388)
Q Consensus       214 ------~~~~~~-~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~~---~~~~~~~pe~  281 (388)
                            ...|.+ ..|-..-.+.--+.+.|+.+   ..+..+-|+|...-.|.-+...-...  ..+   ...-..+-++
T Consensus       112 d~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aD  188 (211)
T COG2910         112 DEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYAD  188 (211)
T ss_pred             cCCceeecCCCCchhHHHHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHH
Confidence                  112222 23433333333334455544   34788889998776663221110000  000   1111236788


Q ss_pred             HHHHHhhhhhhccc
Q 016493          282 VARTLVPRIRVVKG  295 (388)
Q Consensus       282 vA~~~l~~~~~~~~  295 (388)
                      .|-.+++.+..|+-
T Consensus       189 YAiA~lDe~E~~~h  202 (211)
T COG2910         189 YAIAVLDELEKPQH  202 (211)
T ss_pred             HHHHHHHHHhcccc
Confidence            88888887766543

>PRK09620 hypothetical protein; Provisional

Probab=97.83  E-value=3.3e-05  Score=71.07  Aligned_cols=36  Identities=22%  Similarity=0.378  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEeCC
Q 016493           51 AGPRNVVITGST----------------RGLGKALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        51 ~~gk~vlITGas----------------~GIG~aiA~~La~~G~~Vil~~R~   86 (388)
                      ++||+|+||+|.                |-||.++|+.|+++|++|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            479999999886                999999999999999999988764

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.82  E-value=9.4e-05  Score=71.70  Aligned_cols=49  Identities=22%  Similarity=0.367  Sum_probs=41.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHC-C-CeEEEEeCChHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLS-G-DRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~-G-~~Vil~~R~~~~l~~~~~~l   97 (388)
                      .++++|+|+||||+|.||..+|++|+++ | .+|++++|+.+++.++.+++
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            3689999999999999999999999865 6 58999999988877665543

>PLN00106 malate dehydrogenase

Probab=97.81  E-value=0.00011  Score=71.06  Aligned_cols=151  Identities=9%  Similarity=0.107  Sum_probs=91.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+++|.|||++|.+|..+|..|+.+|  .++++.++++.  +..+.+|...                 ....  ...|++
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~-----------------~~~~--~i~~~~   75 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHI-----------------NTPA--QVRGFL   75 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhC-----------------CcCc--eEEEEe
Confidence            34689999999999999999999777  37999999872  2112233221                 1111  122433


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +.++..+.       +...|++|+.||...  .+  .   +.++..+..|....    +.+.+.+++....+.++++|-.
T Consensus        76 ~~~d~~~~-------l~~aDiVVitAG~~~--~~--g---~~R~dll~~N~~i~----~~i~~~i~~~~p~aivivvSNP  137 (323)
T PLN00106         76 GDDQLGDA-------LKGADLVIIPAGVPR--KP--G---MTRDDLFNINAGIV----KTLCEAVAKHCPNALVNIISNP  137 (323)
T ss_pred             CCCCHHHH-------cCCCCEEEEeCCCCC--CC--C---CCHHHHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCC
Confidence            33333222       236899999999854  11  2   23566777787665    4445555555434444444433


Q ss_pred             CC-----------CCCCCCCchhhHHHHHHHHHHHHHHHHHhC
Q 016493          210 GS-----------GGSSTPLTAVYGSTKCGLRQLQASLFKESK  241 (388)
Q Consensus       210 ~~-----------~~~~~~~~~~Y~aSK~al~~l~~~la~el~  241 (388)
                      ..           ...+.|....|+.++.-...|-..+++++.
T Consensus       138 vD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        138 VNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             ccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence            21           113345567788887666677788888875

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.72  E-value=0.0001  Score=70.35  Aligned_cols=84  Identities=21%  Similarity=0.308  Sum_probs=70.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           55 NVVITGSTRGLGKALAREFLL----SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~----~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      -++|-||||.-|.-++.++.+    .|..+.+++||++++++..+.+.+..+.            ..+..+ .+.||.+|
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~------------~ls~~~-i~i~D~~n   73 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGT------------DLSSSV-ILIADSAN   73 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCC------------Ccccce-EEEecCCC
Confidence            489999999999999999999    7889999999999999998887664321            012334 78999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      ++++.++++++       .+++||+|-.
T Consensus        74 ~~Sl~emak~~-------~vivN~vGPy   94 (423)
T KOG2733|consen   74 EASLDEMAKQA-------RVIVNCVGPY   94 (423)
T ss_pred             HHHHHHHHhhh-------EEEEeccccc
Confidence            99999999854       6999999964

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.72  E-value=0.00031  Score=66.80  Aligned_cols=139  Identities=14%  Similarity=0.193  Sum_probs=84.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|++++|+|+++++|.++++.+.+.|.+|+++++++++.+.+ .++                    +..   ..+|..+.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~--------------------g~~---~~~~~~~~  199 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA--------------------GAD---AVFNYRAE  199 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCC---EEEeCCCc
Confidence            589999999999999999999999999999999988765443 111                    111   12455554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC-
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG-  210 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~-  210 (388)
                      +..+.+.+.. . ...+|++++++|...            .+..               ...+.   ..|+++++++.. 
T Consensus       200 ~~~~~~~~~~-~-~~~~d~vi~~~~~~~------------~~~~---------------~~~l~---~~g~~v~~~~~~~  247 (325)
T cd08253         200 DLADRILAAT-A-GQGVDVIIEVLANVN------------LAKD---------------LDVLA---PGGRIVVYGSGGL  247 (325)
T ss_pred             CHHHHHHHHc-C-CCceEEEEECCchHH------------HHHH---------------HHhhC---CCCEEEEEeecCC
Confidence            4444443322 1 136999999986411            1111               11222   358888886521 


Q ss_pred             ----------CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeE
Q 016493          211 ----------SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG  246 (388)
Q Consensus       211 ----------~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~  246 (388)
                                ...........|..+|..+..+.+.+...+....++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         248 RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence                      000111222356677777777777777666554443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.58  E-value=0.00036  Score=67.42  Aligned_cols=148  Identities=13%  Similarity=0.117  Sum_probs=86.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++.+.+.|||++|.+|..+|..|+.++  .++++.+++.  ++..+.++...                 ..  .....+.
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~-----------------~~--~~~v~~~   64 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHI-----------------DT--PAKVTGY   64 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccccccchhhc-----------------Cc--CceEEEe
Confidence            456789999999999999999999666  5899999943  22222233221                 11  1223455


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+.+..+.+       ...|++|+++|...  .+  .   +.+...+..|....    +.+.+.|++. +..++|+++|
T Consensus        65 td~~~~~~~l-------~gaDvVVitaG~~~--~~--~---~tR~dll~~N~~i~----~~i~~~i~~~-~~~~iviv~S  125 (321)
T PTZ00325         65 ADGELWEKAL-------RGADLVLICAGVPR--KP--G---MTRDDLFNTNAPIV----RDLVAAVASS-APKAIVGIVS  125 (321)
T ss_pred             cCCCchHHHh-------CCCCEEEECCCCCC--CC--C---CCHHHHHHHHHHHH----HHHHHHHHHH-CCCeEEEEec
Confidence            5543322222       36899999999843  11  1   23566777777665    4445556655 3456777665


Q ss_pred             CCC------------CCCCCCCchhhHHHHHHHHH--HHHHHHHHh
Q 016493          209 AGS------------GGSSTPLTAVYGSTKCGLRQ--LQASLFKES  240 (388)
Q Consensus       209 ~~~------------~~~~~~~~~~Y~aSK~al~~--l~~~la~el  240 (388)
                      .-.            ...+.|....|+.+ . |..  |-..+++.+
T Consensus       126 NPvdv~~~~~~~~~~~~sg~p~~~viG~g-~-LDs~R~r~~la~~l  169 (321)
T PTZ00325        126 NPVNSTVPIAAETLKKAGVYDPRKLFGVT-T-LDVVRARKFVAEAL  169 (321)
T ss_pred             CcHHHHHHHHHhhhhhccCCChhheeech-h-HHHHHHHHHHHHHh
Confidence            311            12234555567775 2 433  344555555

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.55  E-value=0.00047  Score=65.14  Aligned_cols=48  Identities=21%  Similarity=0.323  Sum_probs=42.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~   98 (388)
                      ..++|+++|+|+ ||+|++++..|++.|++|.+.+|+.++.+++.+++.
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~  161 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ  161 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            456899999998 699999999999999999999999988887776653

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.55  E-value=0.00059  Score=58.43  Aligned_cols=48  Identities=21%  Similarity=0.378  Sum_probs=41.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l   97 (388)
                      .++++++++|+|+ |++|.++++.|++.| .+|++.+|+.++.++..+++
T Consensus        15 ~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~   63 (155)
T cd01065          15 IELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF   63 (155)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            3467899999998 899999999999996 78999999998887766654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.51  E-value=0.00029  Score=64.09  Aligned_cols=177  Identities=16%  Similarity=0.068  Sum_probs=111.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|++||||-+|-=|.-+|.-|+++|+.|..+-|+.+..+-  .++...+.+.         ....+......-.|++|..
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT--~RIeHlY~nP---------~~h~~~~mkLHYgDmTDss   96 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT--ARIEHLYSNP---------HTHNGASMKLHYGDMTDSS   96 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch--hhhhhhhcCc---------hhcccceeEEeeccccchH
Confidence            3599999999999999999999999999988776554432  2233333221         1113456777889999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC-C
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG-S  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~-~  211 (388)
                      .+.++++.+     +++-+.|-|.... .    ..+.+--+-.-+|...|++.++.+.-..-...  +-+..--|++. .
T Consensus        97 ~L~k~I~~i-----kPtEiYnLaAQSH-V----kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSEly  164 (376)
T KOG1372|consen   97 CLIKLISTI-----KPTEVYNLAAQSH-V----KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELY  164 (376)
T ss_pred             HHHHHHhcc-----Cchhhhhhhhhcc-e----EEEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhc
Confidence            999999887     6777888887654 1    22233334556777889988887765442222  23343333321 1


Q ss_pred             C---------CCCCCCchhhHHHHHHHHHHHHHHHHH---hCCCCeEEEEEec
Q 016493          212 G---------GSSTPLTAVYGSTKCGLRQLQASLFKE---SKRSKVGVHTASP  252 (388)
Q Consensus       212 ~---------~~~~~~~~~Y~aSK~al~~l~~~la~e---l~~~gI~vn~v~P  252 (388)
                      +         ..|..+.+.|+++|-+-.-.+-..+..   ++=.||-+|.=+|
T Consensus       165 Gkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  165 GKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             ccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence            1         233445678999997643333333333   2335677776666

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.51  E-value=0.00021  Score=72.36  Aligned_cols=49  Identities=22%  Similarity=0.198  Sum_probs=39.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~   98 (388)
                      |+++||+++|||+++ +|.++|+.|+++|++|++.+++........+++.
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~   49 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL   49 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH
Confidence            457899999999975 9999999999999999999987654443334443

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.43  E-value=0.00042  Score=61.58  Aligned_cols=78  Identities=24%  Similarity=0.245  Sum_probs=47.6

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcc
Q 016493           51 AGPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK  114 (388)
Q Consensus        51 ~~gk~vlITGa----------------s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~  114 (388)
                      ++||+||||+|                ||-+|.++|+.++.+|++|+++..... +.                       
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-----------------------   56 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP-----------------------   56 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------------
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-----------------------
Confidence            47899999984                678999999999999999999887632 11                       


Q ss_pred             cccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       115 ~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                        .+..+..+  ++.+.++..+.+.   +.+..-|++|++|.+..
T Consensus        57 --~p~~~~~i--~v~sa~em~~~~~---~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   57 --PPPGVKVI--RVESAEEMLEAVK---ELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             ----TTEEEE--E-SSHHHHHHHHH---HHGGGGSEEEE-SB--S
T ss_pred             --ccccceEE--Eecchhhhhhhhc---cccCcceeEEEecchhh
Confidence              11234333  4555555544444   44455699999999866

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.40  E-value=0.00086  Score=65.06  Aligned_cols=117  Identities=14%  Similarity=0.167  Sum_probs=68.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG-------DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G-------~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      -+++||||+|.+|..++..|+..+       .+|++.++++.  +++....++...                    ....
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~--------------------~~~~   62 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC--------------------AFPL   62 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc--------------------cccc
Confidence            459999999999999999999855       58999999653  122111111110                    0001


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHI  203 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~I  203 (388)
                      ..|+....+.       .+.+...|++|+.||...  .  ...+.   ++.++.|+    .+++...+.+.+.. ..+.+
T Consensus        63 ~~~~~~~~~~-------~~~l~~aDiVI~tAG~~~--~--~~~~R---~~l~~~N~----~i~~~i~~~i~~~~~~~~ii  124 (325)
T cd01336          63 LKSVVATTDP-------EEAFKDVDVAILVGAMPR--K--EGMER---KDLLKANV----KIFKEQGEALDKYAKKNVKV  124 (325)
T ss_pred             cCCceecCCH-------HHHhCCCCEEEEeCCcCC--C--CCCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeEE
Confidence            1133222222       122347999999999854  1  12232   44555554    45566667676663 36667


Q ss_pred             EEecC
Q 016493          204 FNMDG  208 (388)
Q Consensus       204 v~isS  208 (388)
                      +++|.
T Consensus       125 ivvsN  129 (325)
T cd01336         125 LVVGN  129 (325)
T ss_pred             EEecC
Confidence            77753

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.36  E-value=0.0034  Score=60.39  Aligned_cols=115  Identities=23%  Similarity=0.291  Sum_probs=75.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +.+.|.|+ |++|.++|..|+.+|  .+|++++|++++++....++.+....             .+.......   .+.
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~-------------~~~~~~i~~---~~~   63 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAF-------------LPSPVKIKA---GDY   63 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhc-------------cCCCeEEEc---CCH
Confidence            35788896 899999999999999  58999999999988888887654221             111122221   222


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++           ...|++|+++|...  .+  ..+.   ...++.|    ..+++...+.+++....+.++++|
T Consensus        64 ~~l-----------~~aDIVIitag~~~--~~--g~~R---~dll~~N----~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          64 SDC-----------KDADIVVITAGAPQ--KP--GETR---LDLLEKN----AKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             HHh-----------CCCCEEEEccCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEec
Confidence            221           36899999999843  22  2222   2334444    455666677777765677777775

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.35  E-value=0.01  Score=50.33  Aligned_cols=115  Identities=16%  Similarity=0.214  Sum_probs=76.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|.|+|++|.+|..+|..|...+  .++++.++++++++..+.++......             .........   .+++
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~-------------~~~~~~i~~---~~~~   65 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAP-------------LPSPVRITS---GDYE   65 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHG-------------STEEEEEEE---SSGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhh-------------ccccccccc---cccc
Confidence            48899999999999999999988  47999999999888888888764332             112233333   3333


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++           ...|++|..||...  .  ...+   -.+.++.|.    .+.+...+.+.+....+.++++|
T Consensus        66 ~~-----------~~aDivvitag~~~--~--~g~s---R~~ll~~N~----~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   66 AL-----------KDADIVVITAGVPR--K--PGMS---RLDLLEANA----KIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             GG-----------TTESEEEETTSTSS--S--TTSS---HHHHHHHHH----HHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             cc-----------ccccEEEEeccccc--c--cccc---HHHHHHHhH----hHHHHHHHHHHHhCCccEEEEeC
Confidence            32           36899999999743  1  1223   234455554    45566666666554567777664

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.30  E-value=0.0019  Score=56.11  Aligned_cols=163  Identities=14%  Similarity=0.097  Sum_probs=99.6

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      .+++.+.++++.++|.||+|--|..+.+++++.+  .+|+++.|++..-.+                        .+..+
T Consensus         9 klrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a------------------------t~k~v   64 (238)
T KOG4039|consen    9 KLREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA------------------------TDKVV   64 (238)
T ss_pred             HHHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc------------------------cccee
Confidence            3455577889999999999999999999999998  489999987421110                        22344


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      .-...|.+..++.   +..    +..+|+++++-|.......        .+..+.+..--.+.+.+     |.+.++-.
T Consensus        65 ~q~~vDf~Kl~~~---a~~----~qg~dV~FcaLgTTRgkaG--------adgfykvDhDyvl~~A~-----~AKe~Gck  124 (238)
T KOG4039|consen   65 AQVEVDFSKLSQL---ATN----EQGPDVLFCALGTTRGKAG--------ADGFYKVDHDYVLQLAQ-----AAKEKGCK  124 (238)
T ss_pred             eeEEechHHHHHH---Hhh----hcCCceEEEeecccccccc--------cCceEeechHHHHHHHH-----HHHhCCCe
Confidence            4455666554443   322    2379999999887441111        11111122111222222     33333566


Q ss_pred             EEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          202 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       202 ~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +++.+||.++.   ......|--.|.-++.=+..|--      =++....||++.-+-
T Consensus       125 ~fvLvSS~GAd---~sSrFlY~k~KGEvE~~v~eL~F------~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  125 TFVLVSSAGAD---PSSRFLYMKMKGEVERDVIELDF------KHIIILRPGPLLGER  173 (238)
T ss_pred             EEEEEeccCCC---cccceeeeeccchhhhhhhhccc------cEEEEecCcceeccc
Confidence            89999987432   22346788888877665443322      266779999986543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.24  E-value=0.0042  Score=74.56  Aligned_cols=179  Identities=13%  Similarity=0.123  Sum_probs=113.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+.++.++|++.+++++.+++.+|.++|+.|+++..... .......                    ....+..+.+.-.
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~--------------------~~~~~~~~~~~~~ 1810 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASP--------------------LASAIASVTLGTI 1810 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccccccc--------------------ccccccccccccc
Confidence            345788888888999999999999999999887642211 0000000                    1122334455556


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.+++..+++.+....++++.+||..+....  .....+.......-...+...|.+.|.+.+.+... +++.++.++..
T Consensus      1811 ~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-~~~~~~~vsr~ 1887 (2582)
T TIGR02813      1811 DDTSIEAVIKDIEEKTAQIDGFIHLQPQHKS--VADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-ARASFVTVSRI 1887 (2582)
T ss_pred             chHHHHHHHHhhhccccccceEEEecccccc--ccccccccccchhhHHHHHHHHHHHHhhchhhccC-CCeEEEEEEec
Confidence            6788888888887777899999998775421  00000000111111233445678888877776654 45788888776


Q ss_pred             CCCCCCCCCchh--------hHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 016493          210 GSGGSSTPLTAV--------YGSTKCGLRQLQASLFKESKRSKVGVHTASPG  253 (388)
Q Consensus       210 ~~~~~~~~~~~~--------Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG  253 (388)
                       .+..+......        -....+++.+|+|++++|+....+|...+.|.
T Consensus      1888 -~G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1888 -DGGFGYSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             -CCccccCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence             33333322111        12357899999999999999877888888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.23  E-value=0.0021  Score=62.40  Aligned_cols=39  Identities=28%  Similarity=0.371  Sum_probs=34.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      |+++||+||+||+|...++...+.|++++++..+.++.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~  181 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE  181 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence            899999999999999999999999988777777776655

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.21  E-value=0.0004  Score=62.60  Aligned_cols=47  Identities=23%  Similarity=0.334  Sum_probs=41.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   95 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~   95 (388)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++++++++..+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            457899999999985 89999999999999999999999877665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.17  E-value=0.0086  Score=61.35  Aligned_cols=43  Identities=21%  Similarity=0.142  Sum_probs=37.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ...+.+|+|+|+ |.+|+..++.+...|++|++.++++++++..
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a  204 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV  204 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            346899999997 7899999999999999999999999887654

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.16  E-value=0.0088  Score=57.81  Aligned_cols=118  Identities=18%  Similarity=0.211  Sum_probs=79.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +.+++.+.|+|+ |++|..+|..|+.+|.  .+++.++++++++....++....+.             . .++....  
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~-------------~-~~~~i~~--   65 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPF-------------T-SPTKIYA--   65 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccc-------------c-CCeEEEe--
Confidence            446789999998 9999999999999995  7999999999988888888764211             1 1222221  


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                       .+.+++           ..-|++|..||...  .+  ..+.   ...++.|    ..+.+.+.+.+.+....+.++++|
T Consensus        66 -~~~~~~-----------~~adivIitag~~~--k~--g~~R---~dll~~N----~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         66 -GDYSDC-----------KDADLVVITAGAPQ--KP--GETR---LDLVEKN----LKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             -CCHHHh-----------CCCCEEEEecCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEcc
Confidence             222222           36899999999853  22  2333   2334444    345566677777665567777775

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.14  E-value=0.006  Score=55.11  Aligned_cols=145  Identities=17%  Similarity=0.111  Sum_probs=87.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~---~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++++|||++|=.|+||.+.+.+.|.   +.++.+.                                      -.+|+++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------------------------------kd~DLt~   43 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------------------------------KDADLTN   43 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------------------------------ccccccc
Confidence            6899999999999999999999885   4444332                                      1469999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCC--CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ--FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~--~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      .++++++++..     ++..+|+.|...+  +.+..  .+.+-+..    |+.-.-+.++.+...-.     ..++...|
T Consensus        44 ~a~t~~lF~~e-----kPthVIhlAAmVG--Glf~N~~ynldF~r~----Nl~indNVlhsa~e~gv-----~K~vsclS  107 (315)
T KOG1431|consen   44 LADTRALFESE-----KPTHVIHLAAMVG--GLFHNNTYNLDFIRK----NLQINDNVLHSAHEHGV-----KKVVSCLS  107 (315)
T ss_pred             hHHHHHHHhcc-----CCceeeehHhhhc--chhhcCCCchHHHhh----cceechhHHHHHHHhch-----hhhhhhcc
Confidence            99999999865     6788888887643  22322  23343433    33333334444333211     11222222


Q ss_pred             C-C--------------CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 016493          209 A-G--------------SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV  255 (388)
Q Consensus       209 ~-~--------------~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v  255 (388)
                      . -              ...-+-|...-|+-+|..+.-..++.+.+++.   ...++.|-.+
T Consensus       108 tCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNv  166 (315)
T KOG1431|consen  108 TCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNV  166 (315)
T ss_pred             eeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccc
Confidence            1 0              01112244567999998777777888888753   4444555443

>PRK06849 hypothetical protein; Provisional

Probab=97.12  E-value=0.0047  Score=61.42  Aligned_cols=39  Identities=28%  Similarity=0.365  Sum_probs=35.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   90 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l   90 (388)
                      ++|+|||||++.++|+.+|+.|.+.|++|++++.++...
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            468999999999999999999999999999999987554

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.10  E-value=0.0033  Score=61.30  Aligned_cols=86  Identities=21%  Similarity=0.334  Sum_probs=61.9

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---------------------HHHHHHHHHHHHHHhh
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS---------------------ESVRMTVTELEENLKE  103 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~---------------------~~l~~~~~~l~~~~~~  103 (388)
                      +.+..+++++|+|.|+ ||+|..+|+.|++.|. ++.++|++.                     .|.+.+.+.+++..  
T Consensus        17 ~~Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in--   93 (338)
T PRK12475         17 EGQRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN--   93 (338)
T ss_pred             HHHHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC--
Confidence            3456788899999997 7899999999999997 899999874                     34455555555532  


Q ss_pred             hhhhcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          104 GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       104 ~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                                   +..++..+..|++. +.+++++       ...|++|.+.
T Consensus        94 -------------p~v~i~~~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (338)
T PRK12475         94 -------------SEVEIVPVVTDVTV-EELEELV-------KEVDLIIDAT  124 (338)
T ss_pred             -------------CCcEEEEEeccCCH-HHHHHHh-------cCCCEEEEcC
Confidence                         33567777778763 3444332       3578888776

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.09  E-value=0.0014  Score=62.25  Aligned_cols=49  Identities=16%  Similarity=0.283  Sum_probs=43.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~   98 (388)
                      .++++|+++|+|+ ||+|+++++.|++.| .+|++++|+.++++++.+++.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            4678999999997 899999999999999 799999999998887766653

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.08  E-value=0.0037  Score=56.64  Aligned_cols=161  Identities=18%  Similarity=0.221  Sum_probs=102.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLS-GD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~-G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      -+...++|||+-|-+|.++|+.|-.+ |. .||+.+-.+....     ..+                 .++   ++-.|+
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~-----------------~GP---yIy~DI   96 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTD-----------------VGP---YIYLDI   96 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcc-----------------cCC---chhhhh
Confidence            34568999999999999999988764 64 5777654322110     000                 112   456799


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      .|.+++++++-.     .+||-+||-.....      ...+...-...+||..|.-++++.+..+      +-++..=|.
T Consensus        97 LD~K~L~eIVVn-----~RIdWL~HfSALLS------AvGE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPST  159 (366)
T KOG2774|consen   97 LDQKSLEEIVVN-----KRIDWLVHFSALLS------AVGETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPST  159 (366)
T ss_pred             hccccHHHhhcc-----cccceeeeHHHHHH------HhcccCCceeeeecchhhhHHHHHHHHc------CeeEeeccc
Confidence            998888876532     38999998776532      1122234456789999999998877543      234544454


Q ss_pred             CCCCCCCC------C------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEE-ecCcccc
Q 016493          209 AGSGGSST------P------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTA-SPGMVLT  257 (388)
Q Consensus       209 ~~~~~~~~------~------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v-~PG~v~T  257 (388)
                      + +++.+.      |      +...|+.||.-.+.+-+.+...+   |+.+.+. -||.+..
T Consensus       160 I-GAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  160 I-GAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISA  217 (366)
T ss_pred             c-cccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCccccc
Confidence            4 333332      1      23579999997777777666655   4555555 3666643

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.04  E-value=0.0013  Score=68.00  Aligned_cols=48  Identities=31%  Similarity=0.398  Sum_probs=41.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (388)
                      .++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            4678999999999 69999999999999999999999988877665543

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.04  E-value=0.0041  Score=56.12  Aligned_cols=87  Identities=20%  Similarity=0.292  Sum_probs=58.9

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHHhhhh
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGM  105 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~  105 (388)
                      +.+.++++++|+|.|+ ||+|.++|+.|+..|. ++.+++++                   ..|.+.+.+.+++..    
T Consensus        14 ~~q~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n----   88 (202)
T TIGR02356        14 EGQQRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN----   88 (202)
T ss_pred             HHHHHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC----
Confidence            3456788899999995 7999999999999996 89999987                   344455555554432    


Q ss_pred             hhcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          106 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       106 ~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                                 +..++..+..++.+ +.+.++       +.+.|++|.+..
T Consensus        89 -----------p~v~i~~~~~~i~~-~~~~~~-------~~~~D~Vi~~~d  120 (202)
T TIGR02356        89 -----------SDIQVTALKERVTA-ENLELL-------INNVDLVLDCTD  120 (202)
T ss_pred             -----------CCCEEEEehhcCCH-HHHHHH-------HhCCCEEEECCC
Confidence                       23455555555543 333332       236899888763

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.02  E-value=0.012  Score=58.29  Aligned_cols=76  Identities=17%  Similarity=0.205  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +.++.++|.|+ |.+|+.+++.+.+.|++|++++|++++++++...+                    +..   +..+..+
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~--------------------g~~---v~~~~~~  220 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF--------------------GGR---IHTRYSN  220 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc--------------------Cce---eEeccCC
Confidence            46678999987 78999999999999999999999988766543322                    111   2234455


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+.+.+.+       ...|++|+++++
T Consensus       221 ~~~l~~~l-------~~aDvVI~a~~~  240 (370)
T TIGR00518       221 AYEIEDAV-------KRADLLIGAVLI  240 (370)
T ss_pred             HHHHHHHH-------ccCCEEEEcccc
Confidence            55544333       357999999876

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.02  E-value=0.0081  Score=57.18  Aligned_cols=49  Identities=27%  Similarity=0.340  Sum_probs=43.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      +.++|+++|.|+ ||.|++++..|++.|. +|++++|+.++.+++.+++.+
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~  173 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA  173 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence            567899999997 8899999999999997 799999999999888887754

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.02  E-value=0.0027  Score=60.86  Aligned_cols=80  Identities=20%  Similarity=0.321  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+ .++                    +..   ...|..+.
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~--------------------~~~---~~~~~~~~  221 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL--------------------GAD---YVIDYRKE  221 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCC---eEEecCCh
Confidence            578999999999999999999999999999999988765433 111                    111   12366665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+.+.+....  +++|++++++|.
T Consensus       222 ~~~~~~~~~~~~--~~~d~~i~~~g~  245 (342)
T cd08266         222 DFVREVRELTGK--RGVDVVVEHVGA  245 (342)
T ss_pred             HHHHHHHHHhCC--CCCcEEEECCcH
Confidence            555555443322  369999999973

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.00  E-value=0.0035  Score=60.74  Aligned_cols=151  Identities=13%  Similarity=0.128  Sum_probs=96.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      .+.|.|+|++|.+|..+|..|+.+|.       .+++.+.+++  +++..+.++......             ....+..
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-------------~~~~~~i   68 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFP-------------LLAEIVI   68 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccc-------------ccCceEE
Confidence            46899999999999999999998884       6999999543  355444444432100             0011111


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGH  202 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~  202 (388)
                       .  -.+++           ....-|++|..||...  .+  ..+.   ...++.|    ..+.+.+.+.+.+.. ..+.
T Consensus        69 -~--~~~~~-----------~~~daDivvitaG~~~--k~--g~tR---~dll~~N----~~i~~~i~~~i~~~~~~~~i  123 (322)
T cd01338          69 -T--DDPNV-----------AFKDADWALLVGAKPR--GP--GMER---ADLLKAN----GKIFTAQGKALNDVASRDVK  123 (322)
T ss_pred             -e--cCcHH-----------HhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHH----HHHHHHHHHHHHhhCCCCeE
Confidence             1  11222           2236899999999843  22  2232   2345545    456677778887765 3677


Q ss_pred             EEEecCCC-------CCCC-CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 016493          203 IFNMDGAG-------SGGS-STPLTAVYGSTKCGLRQLQASLFKESK  241 (388)
Q Consensus       203 Iv~isS~~-------~~~~-~~~~~~~Y~aSK~al~~l~~~la~el~  241 (388)
                      ++++|-..       .-.. +.|....|+.++.--..|...+++.+.
T Consensus       124 iivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         124 VLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             EEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence            77776421       1123 266677899999988889999998875

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.99  E-value=0.016  Score=53.41  Aligned_cols=37  Identities=22%  Similarity=0.278  Sum_probs=32.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   87 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~   87 (388)
                      ++++++|+|.|+ ||+|.++++.|++.|. +++++|.+.
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            467789999996 7999999999999996 899988754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd00704 MDH Malate dehydrogenase

Probab=96.99  E-value=0.0066  Score=58.86  Aligned_cols=111  Identities=13%  Similarity=0.141  Sum_probs=68.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      .|.||||+|.+|..++..|+..|.       .+++.++++  +.++.                               ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g-------------------------------~~   50 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG-------------------------------VV   50 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce-------------------------------ee
Confidence            589999999999999999998772       499999986  43322                               23


Q ss_pred             ccCCCHHHH--H--HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCC
Q 016493          126 CDVCEPADV--Q--KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKG  200 (388)
Q Consensus       126 ~Dls~~~~v--~--~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~  200 (388)
                      .|+.|....  .  .+.....+.+...|++|+.||...  .+  ..+.   ...++.|    ..+.+.+.+.+.+. +..
T Consensus        51 ~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~--~~--g~tR---~dll~~N----~~i~~~i~~~i~~~~~~~  119 (323)
T cd00704          51 MELQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPR--KP--GMER---ADLLRKN----AKIFKEQGEALNKVAKPT  119 (323)
T ss_pred             eehhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCC--Cc--CCcH---HHHHHHh----HHHHHHHHHHHHHhCCCC
Confidence            344333100  0  000112233357999999999843  22  2232   3344544    45667778888777 356


Q ss_pred             cEEEEec
Q 016493          201 GHIFNMD  207 (388)
Q Consensus       201 g~Iv~is  207 (388)
                      +.++++|
T Consensus       120 ~iiivvs  126 (323)
T cd00704         120 VKVLVVG  126 (323)
T ss_pred             eEEEEeC
Confidence            7777775

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.98  E-value=0.0026  Score=61.77  Aligned_cols=42  Identities=21%  Similarity=0.284  Sum_probs=37.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++++|+||++++|..+++.+...|++|+.+++++++.+.+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~  192 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL  192 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999998888999999999988776544

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.97  E-value=0.0025  Score=60.65  Aligned_cols=78  Identities=22%  Similarity=0.290  Sum_probs=62.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ...++|-||+|.-|.-+|++|+++|.+..+.+||..++..+.++|-                    .+...+.+++  ++
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG--------------------~~~~~~p~~~--p~   63 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG--------------------PEAAVFPLGV--PA   63 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC--------------------ccccccCCCC--HH
Confidence            4678999999999999999999999999999999999988877763                    3344455555  66


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                      .++++++       +.++|+||+|-..
T Consensus        64 ~~~~~~~-------~~~VVlncvGPyt   83 (382)
T COG3268          64 ALEAMAS-------RTQVVLNCVGPYT   83 (382)
T ss_pred             HHHHHHh-------cceEEEecccccc
Confidence            6655554       6799999999643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.96  E-value=0.017  Score=54.27  Aligned_cols=39  Identities=13%  Similarity=0.215  Sum_probs=33.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCCh
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSS   87 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~   87 (388)
                      .-.+++.+|+|.|+ ||+|.++|+.|++.| -++.+++.+.
T Consensus        25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            34578899999996 799999999999999 5899988763

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.95  E-value=0.0047  Score=59.89  Aligned_cols=113  Identities=17%  Similarity=0.175  Sum_probs=70.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ++.|+||+|.+|..++..|+.+|.       .+++.+++++.                             ........|
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-----------------------------~~a~g~~~D   51 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-----------------------------KVLEGVVME   51 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-----------------------------cccceeEee
Confidence            478999999999999999998663       59999986542                             012223445


Q ss_pred             CCCHHHHH--HH--HHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcE
Q 016493          128 VCEPADVQ--KL--SNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH  202 (388)
Q Consensus       128 ls~~~~v~--~~--~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~  202 (388)
                      +.|.....  ..  .....+.+...|++|+.||...  .+  .   +.....++.|.    .+++.+.+.+.+. +..+.
T Consensus        52 l~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~--~~--~---~tr~~ll~~N~----~i~k~i~~~i~~~~~~~~i  120 (324)
T TIGR01758        52 LMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPR--KE--G---MERRDLLSKNV----KIFKEQGRALDKLAKKDCK  120 (324)
T ss_pred             hhcccchhcCceeccCChHHHhCCCCEEEEcCCCCC--CC--C---CcHHHHHHHHH----HHHHHHHHHHHhhCCCCeE
Confidence            55543110  00  0011233457999999999843  11  1   22455666554    5667777777776 35677


Q ss_pred             EEEec
Q 016493          203 IFNMD  207 (388)
Q Consensus       203 Iv~is  207 (388)
                      ++++|
T Consensus       121 iivvs  125 (324)
T TIGR01758       121 VLVVG  125 (324)
T ss_pred             EEEeC
Confidence            77775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.89  E-value=0.0046  Score=58.82  Aligned_cols=48  Identities=15%  Similarity=0.128  Sum_probs=42.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~   98 (388)
                      ++++|+++|.|+ ||.|++++..|++.|. +|.++.|+.++.+++++++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            467899999986 8999999999999996 79999999999888777653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.88  E-value=0.0034  Score=61.46  Aligned_cols=42  Identities=21%  Similarity=0.278  Sum_probs=37.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++++|+||++++|..+++.+...|++|+.+++++++.+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~  199 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL  199 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            589999999999999999988888999999999988776543

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.85  E-value=0.0069  Score=57.41  Aligned_cols=50  Identities=24%  Similarity=0.360  Sum_probs=44.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      .+.+|++++|.|| ||-+++++..|++.|. +++++.|+.++++++++.+.+
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~  172 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGE  172 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            4557899999996 8999999999999995 799999999999988887765

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.84  E-value=0.0077  Score=57.28  Aligned_cols=49  Identities=22%  Similarity=0.342  Sum_probs=42.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      +.++|+++|.|| ||-|++++..|++.|. +|.+..|+.++.+++.+++.+
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            567899999997 8999999999999996 799999999999888777643

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.82  E-value=0.01  Score=54.04  Aligned_cols=42  Identities=24%  Similarity=0.223  Sum_probs=35.8

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      -.+.+.+++.++|+|.|+ ||+|.++|+.|+..|. ++++.|.+
T Consensus        19 g~~~q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         19 TPKLLEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CHHHHHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            334456778899999996 8999999999999997 69999887

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.81  E-value=0.0038  Score=60.16  Aligned_cols=42  Identities=26%  Similarity=0.362  Sum_probs=36.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|+||++++|..+++.+...|++|+.+++++++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999988888999999999988776543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.81  E-value=0.0065  Score=57.93  Aligned_cols=42  Identities=33%  Similarity=0.429  Sum_probs=37.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      .+++||+++|.|. |++|+++|+.|.+.|++|++.+|++++++
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            4789999999998 77999999999999999999999987654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.79  E-value=0.0044  Score=59.42  Aligned_cols=41  Identities=27%  Similarity=0.426  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .+++++|+||++++|.++++.+...|++|+.+++++++.+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999988776544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.77  E-value=0.0055  Score=58.01  Aligned_cols=42  Identities=26%  Similarity=0.382  Sum_probs=37.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ++++++|+|+++++|.++++.+...|++|++++++.++.+.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC  180 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999999987765543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.70  E-value=0.0057  Score=59.34  Aligned_cols=43  Identities=23%  Similarity=0.267  Sum_probs=36.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVT   95 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~   95 (388)
                      |++++|+||++++|.++++.....|+ +|+.+++++++.+.+.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~  198 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS  198 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence            48999999999999999988888998 79999998877655443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.69  E-value=0.011  Score=57.62  Aligned_cols=41  Identities=29%  Similarity=0.426  Sum_probs=35.9

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   87 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~   87 (388)
                      +.+.+++.++|+|.|+ ||+|..+|+.|++.|. ++.+++++.
T Consensus        17 ~~Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         17 EGQQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            3456778899999998 8999999999999997 899999874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.68  E-value=0.0081  Score=60.18  Aligned_cols=47  Identities=21%  Similarity=0.367  Sum_probs=40.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l   97 (388)
                      ++++|+++|.|+ ||+|+.+++.|+++|. +++++.|+.++.+++.+++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            578999999997 9999999999999995 7999999988877665543

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.61  E-value=0.0027  Score=47.19  Aligned_cols=36  Identities=25%  Similarity=0.420  Sum_probs=24.0

Q ss_pred             CCC-CeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCCh
Q 016493           51 AGP-RNVVITGSTRGLGKA--LAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        51 ~~g-k~vlITGas~GIG~a--iA~~La~~G~~Vil~~R~~   87 (388)
                      +.| |+|||+|+|+|.|++  ++..| ..|++.+-++.+.
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            344 999999999999999  55555 6788888877643

>PRK05086 malate dehydrogenase; Provisional

Probab=96.59  E-value=0.007  Score=58.41  Aligned_cols=35  Identities=23%  Similarity=0.336  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-C--CCeEEEEeCChH
Q 016493           54 RNVVITGSTRGLGKALAREFLL-S--GDRVVVASRSSE   88 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~-~--G~~Vil~~R~~~   88 (388)
                      +.++|.||+|++|.+++..+.. .  ++.+++.+|++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            4689999999999999998855 3  357888888743

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.54  E-value=0.012  Score=58.23  Aligned_cols=85  Identities=18%  Similarity=0.252  Sum_probs=58.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHHhhhhhh
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMA  107 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~  107 (388)
                      +..+++++|+|.|+ ||+|.++++.|+..|. ++.+++++                   ..|.+.+.+.+++..+     
T Consensus       130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-----  203 (376)
T PRK08762        130 QRRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP-----  203 (376)
T ss_pred             HHHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC-----
Confidence            45678889999986 8999999999999997 79999997                   4556666666655322     


Q ss_pred             cCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                                ..++..+...+++ +.+.+++       ...|++|++..
T Consensus       204 ----------~v~v~~~~~~~~~-~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        204 ----------DVQVEAVQERVTS-DNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             ----------CCEEEEEeccCCh-HHHHHHH-------hCCCEEEECCC
Confidence                      2445555545543 3333322       25788888774

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.53  E-value=0.021  Score=51.48  Aligned_cols=45  Identities=22%  Similarity=0.254  Sum_probs=37.6

Q ss_pred             hhhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           41 ANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        41 ~~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      +++..+.+-+++.++|+|.|+ ||+|..+|+.|++.|. ++++.|++
T Consensus         9 ~~~~~~~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354         9 ARHTPKIVQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhcCHHHHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            334444456778899999997 7899999999999998 79999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.52  E-value=0.017  Score=55.12  Aligned_cols=49  Identities=12%  Similarity=0.209  Sum_probs=39.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---HHHHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTEL   97 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~---~~l~~~~~~l   97 (388)
                      ..++++|+++|.|| ||-+++++..|+..|. +|.++.|++   ++.+++.+++
T Consensus       119 ~~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        119 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            35678999999997 7779999999999996 799999995   4666665554

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.52  E-value=0.019  Score=52.86  Aligned_cols=86  Identities=13%  Similarity=0.193  Sum_probs=56.4

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHHhhhhh
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMM  106 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~  106 (388)
                      .+.++++++|+|.|+ ||+|.++|+.|+..|. +++++|.+.                   .|.+.+.+.+++..     
T Consensus        15 ~q~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-----   88 (228)
T cd00757          15 GQEKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN-----   88 (228)
T ss_pred             HHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC-----
Confidence            345678899999995 7999999999999996 788875532                   23444444444432     


Q ss_pred             hcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          107 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       107 ~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                                +..++..+..+++ .+.+.+++       ...|++|.+..
T Consensus        89 ----------p~~~i~~~~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          89 ----------PDVEIEAYNERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             ----------CCCEEEEecceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence                      2345666666663 23333332       25899888764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.48  E-value=0.061  Score=55.11  Aligned_cols=42  Identities=19%  Similarity=0.117  Sum_probs=36.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ..+.+++|.|+ |.+|...++.+...|++|++.+++.++++..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a  203 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  203 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            45689999996 8899999999999999999999998876543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.47  E-value=0.032  Score=46.72  Aligned_cols=80  Identities=20%  Similarity=0.373  Sum_probs=54.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHHhhhhhhcCCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAAGGSS  112 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~~~~~  112 (388)
                      .++|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..|.+.+.+.+++..           
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-----------   69 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-----------   69 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-----------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-----------
Confidence            478999996 7899999999999997 78888763                   123444455554432           


Q ss_pred             cccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       113 ~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                          +..++..+..++ +.+...++++       ..|++|.+..
T Consensus        70 ----p~~~v~~~~~~~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   70 ----PDVEVEAIPEKI-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             ----TTSEEEEEESHC-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             ----Cceeeeeeeccc-cccccccccc-------CCCEEEEecC
Confidence                246677788888 3344444442       5788888753

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.46  E-value=0.012  Score=59.71  Aligned_cols=81  Identities=21%  Similarity=0.188  Sum_probs=55.8

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCc
Q 016493           50 KAGPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK  113 (388)
Q Consensus        50 ~~~gk~vlITGa----------------s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  113 (388)
                      +++||.||||+|                ||-+|.++|+.+..+|++|++++-... +.                      
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~----------------------  309 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA----------------------  309 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC----------------------
Confidence            589999999994                568999999999999999998874321 00                      


Q ss_pred             ccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC
Q 016493          114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP  163 (388)
Q Consensus       114 ~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~  163 (388)
                         .+..+.++.  +.   +.+++.+.+.+.+. .|++|.+|.+.. +.+
T Consensus       310 ---~p~~v~~i~--V~---ta~eM~~av~~~~~-~Di~I~aAAVaD-yrp  349 (475)
T PRK13982        310 ---DPQGVKVIH--VE---SARQMLAAVEAALP-ADIAIFAAAVAD-WRV  349 (475)
T ss_pred             ---CCCCceEEE--ec---CHHHHHHHHHhhCC-CCEEEEeccccc-eee
Confidence               122344433  33   34445555555544 799999999866 443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.45  E-value=0.016  Score=53.26  Aligned_cols=76  Identities=20%  Similarity=0.356  Sum_probs=58.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +.++|.|+ |-+|..+|+.|.++|++|+++++++++.++..++                     ....+.+..|-+|++.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------------------~~~~~~v~gd~t~~~~   58 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------------------ELDTHVVIGDATDEDV   58 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------------------hcceEEEEecCCCHHH
Confidence            46788887 5699999999999999999999999987764332                     1347788999999887


Q ss_pred             HHHHHHHHHhhcCCccEEEEcccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      ++++=      ....|++|...|-
T Consensus        59 L~~ag------i~~aD~vva~t~~   76 (225)
T COG0569          59 LEEAG------IDDADAVVAATGN   76 (225)
T ss_pred             HHhcC------CCcCCEEEEeeCC
Confidence            76541      1257888877764

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.43  E-value=0.015  Score=56.28  Aligned_cols=42  Identities=24%  Similarity=0.374  Sum_probs=37.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      -.|++++|+|++ |+|...++.....|++|+..+|++++++.+
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a  206 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA  206 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence            358999999998 999988888777999999999999987654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.41  E-value=0.014  Score=53.93  Aligned_cols=41  Identities=27%  Similarity=0.390  Sum_probs=35.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      ..|++++|+|+++ +|.++++.+...|.+|+++++++++.+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~  173 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL  173 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            3688999999988 9999999999999999999998766543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.40  E-value=0.026  Score=53.01  Aligned_cols=114  Identities=16%  Similarity=0.242  Sum_probs=72.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC----CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCccccc-CceEEEEEccCCC
Q 016493           56 VVITGSTRGLGKALAREFLLSG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV-HAKVAGIACDVCE  130 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dls~  130 (388)
                      +.|.||+|.+|..++..|+..|    .+|++.++++++++....+++.....             . ..++.  .  -+|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~-------------~~~~~i~--~--~~d   63 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP-------------LADIKVS--I--TDD   63 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh-------------ccCcEEE--E--CCc
Confidence            4689998899999999999999    78999999999888887777653221             0 11111  1  112


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                         ..+       .+...|++|..+|....  +  ..+.   ...+    .....+.+...+.+++....+.++++|
T Consensus        64 ---~~~-------~~~~aDiVv~t~~~~~~--~--g~~r---~~~~----~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          64 ---PYE-------AFKDADVVIITAGVGRK--P--GMGR---LDLL----KRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             ---hHH-------HhCCCCEEEECCCCCCC--c--CCCH---HHHH----HHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence               111       12368999999997542  1  1121   1122    233455667777777665667777774

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.39  E-value=0.013  Score=57.38  Aligned_cols=82  Identities=21%  Similarity=0.289  Sum_probs=54.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      --+|+.+||.||++|.|.+.++-....|+..++++++.++.+ +.+++                    +..   ...|..
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l--------------------GAd---~vvdy~  210 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL--------------------GAD---EVVDYK  210 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc--------------------CCc---EeecCC
Confidence            346789999999999999999998889955555555555543 22222                    111   345777


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      +++-++...+..   .+++|+++-|.|..
T Consensus       211 ~~~~~e~~kk~~---~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  211 DENVVELIKKYT---GKGVDVVLDCVGGS  236 (347)
T ss_pred             CHHHHHHHHhhc---CCCccEEEECCCCC
Confidence            744443333322   46899999999863

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.38  E-value=0.068  Score=51.51  Aligned_cols=117  Identities=16%  Similarity=0.212  Sum_probs=68.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC-
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-  129 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls-  129 (388)
                      ++.|+|++|.+|..++..|+..|.  .|++++|++  ++++....++.+....             .+...   ....+ 
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~-------------~~~~~---~i~~~~   65 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAA-------------AGIDA---EIKISS   65 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhc-------------cCCCc---EEEECC
Confidence            689999999999999999999985  499999965  5555444444332110             01111   11111 


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.+.           ....|++|.++|...  .  ...+.   ...++.|.    .+++.+.+.|.+....+.++++++.
T Consensus        66 d~~~-----------l~~aDiViitag~p~--~--~~~~r---~dl~~~n~----~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          66 DLSD-----------VAGSDIVIITAGVPR--K--EGMSR---LDLAKKNA----KIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             CHHH-----------hCCCCEEEEecCCCC--C--CCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            2221           236899999999743  2  12232   23344444    3445555555555456778887653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.38  E-value=0.03  Score=52.07  Aligned_cols=40  Identities=20%  Similarity=0.275  Sum_probs=34.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   87 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~   87 (388)
                      .+..++.++|+|.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus        26 ~Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         26 GQEKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             HHHHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            356788899999998 8999999999999996 788887753

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.35  E-value=0.035  Score=54.02  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=35.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      ..|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~  209 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSL  209 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHH
Confidence            36899999996 8999999998888998 68889999887753

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.34  E-value=0.026  Score=55.46  Aligned_cols=85  Identities=11%  Similarity=0.081  Sum_probs=58.1

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHHhhhhh
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMM  106 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~  106 (388)
                      .+.++++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .|.+.+.+.+++..+    
T Consensus        22 ~q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np----   96 (355)
T PRK05597         22 GQQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP----   96 (355)
T ss_pred             HHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC----
Confidence            456778899999997 8999999999999996 788988764                   345555556555432    


Q ss_pred             hcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          107 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       107 ~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                                 ..++..+..+++. +...+++       ...|++|.+.
T Consensus        97 -----------~v~v~~~~~~i~~-~~~~~~~-------~~~DvVvd~~  126 (355)
T PRK05597         97 -----------DVKVTVSVRRLTW-SNALDEL-------RDADVILDGS  126 (355)
T ss_pred             -----------CcEEEEEEeecCH-HHHHHHH-------hCCCEEEECC
Confidence                       3456666666553 2222222       2567777766

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.31  E-value=0.011  Score=55.32  Aligned_cols=73  Identities=19%  Similarity=0.363  Sum_probs=53.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++|+|||+- |+.++++|.++|++|+...++....+...+                       .....+..+..|.+++
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----------------------~g~~~v~~g~l~~~~l   57 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----------------------HQALTVHTGALDPQEL   57 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----------------------cCCceEEECCCCHHHH
Confidence            6999999987 999999999999999999988764322110                       1122345677777777


Q ss_pred             HHHHHHHHhhcCCccEEEEccc
Q 016493          135 QKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      .+++.+-     ++|++|..+.
T Consensus        58 ~~~l~~~-----~i~~VIDAtH   74 (256)
T TIGR00715        58 REFLKRH-----SIDILVDATH   74 (256)
T ss_pred             HHHHHhc-----CCCEEEEcCC
Confidence            6666532     7999998875

This enzyme was found to be a monomer by gel filtration.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.31  E-value=0.021  Score=57.55  Aligned_cols=46  Identities=22%  Similarity=0.396  Sum_probs=39.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE   96 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~   96 (388)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++++|+.++++++.++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999997 9999999999999997 799999999887665544

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.27  E-value=0.072  Score=51.58  Aligned_cols=119  Identities=14%  Similarity=0.195  Sum_probs=73.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +.+.+.|.|| |.+|..++..++..| ..|++.+++++.++...-++......             .+.... +.. -+|
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~-------------~~~~~~-i~~-~~d   67 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTL-------------VGSNIN-ILG-TNN   67 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccc-------------cCCCeE-EEe-CCC
Confidence            5578999997 889999999999999 78999999987765433333221000             011111 111 123


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      .+++           ..-|++|.++|...  .+  ..+.   ...+..|.    .+.+.+.+.|.+....+.++++|-
T Consensus        68 ~~~l-----------~~ADiVVitag~~~--~~--g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         68 YEDI-----------KDSDVVVITAGVQR--KE--EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             HHHh-----------CCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            2222           25799999999743  21  2232   34555555    567777787777655676777753

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.26  E-value=0.017  Score=54.86  Aligned_cols=40  Identities=25%  Similarity=0.352  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      .|++++|+|+++++|.++++.+...|++|+++.+++++.+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999999999877654

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.25  E-value=0.011  Score=60.38  Aligned_cols=47  Identities=19%  Similarity=0.349  Sum_probs=40.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   95 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~   95 (388)
                      ..++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+
T Consensus       327 ~~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        327 NIPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CCCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            35678999999996 799999999999999999999999887766544

>PRK14968 putative methyltransferase; Provisional

Probab=96.24  E-value=0.11  Score=45.59  Aligned_cols=123  Identities=19%  Similarity=0.176  Sum_probs=71.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +++++|-.|++.|.   ++..+++++.+|+.++++++.++.+.+.+.....              ....+.++.+|+.+.
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--------------~~~~~~~~~~d~~~~   85 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNI--------------RNNGVEVIRSDLFEP   85 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCC--------------CCcceEEEecccccc
Confidence            67889999988766   5666666689999999998887766555543210              011277788887542


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHH---HHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS---ILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~---~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                               ..+  .++|.++.|..... ..+.... .+.+...+..+..+.   -.+++.+.+.|+.   +|.++++.
T Consensus        86 ---------~~~--~~~d~vi~n~p~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~---gG~~~~~~  148 (188)
T PRK14968         86 ---------FRG--DKFDVILFNPPYLP-TEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP---GGRILLLQ  148 (188)
T ss_pred             ---------ccc--cCceEEEECCCcCC-CCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC---CeEEEEEE
Confidence                     111  26899999987643 2222111 122222222222222   2345666666653   46665553

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.23  E-value=0.025  Score=54.24  Aligned_cols=42  Identities=19%  Similarity=0.325  Sum_probs=37.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|+||++++|..+++.....|++|+.+++++++.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999998889999999999988776543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.22  E-value=0.025  Score=56.84  Aligned_cols=46  Identities=20%  Similarity=0.426  Sum_probs=39.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~   96 (388)
                      ++.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++..++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            478899999997 999999999999999 7899999998877655443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.20  E-value=0.19  Score=48.67  Aligned_cols=124  Identities=14%  Similarity=0.112  Sum_probs=72.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++.+.+.|.|| |.+|..+|..++..|. .|++.++++++++...-++......             .+.......  .+
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~-------------~~~~~~I~~--~~   67 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVI-------------AGSNSKVIG--TN   67 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhc-------------cCCCeEEEE--CC
Confidence            45578999995 7799999999999994 8999999988754322222221000             111111111  12


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      |.+++           ..-|++|+.+|.....+ ..+.+.+ -...+..|    ..+.+.+.+.+.+....+.++++|
T Consensus        68 d~~~l-----------~~aDiVI~tag~~~~~~-~~~~~~~-r~~~l~~n----~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         68 NYEDI-----------AGSDVVIVTAGLTKRPG-KSDKEWN-RDDLLPLN----AKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             CHHHh-----------CCCCEEEECCCCCCCCC-CCcCCCC-HHHHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence            32221           36899999999854211 1111111 13344445    346777788887765566777775

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.16  E-value=0.027  Score=53.91  Aligned_cols=43  Identities=28%  Similarity=0.324  Sum_probs=37.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ..++.+++++|.|. |++|+.+++.|.+.|++|++.+|++++.+
T Consensus       147 ~~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        147 PITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            35678999999997 77999999999999999999999976543

>PRK08328 hypothetical protein; Provisional

Probab=96.14  E-value=0.049  Score=50.20  Aligned_cols=44  Identities=20%  Similarity=0.345  Sum_probs=36.1

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   91 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~   91 (388)
                      .+.++++++|+|.|+ ||+|.++++.|+..|. +++++|.+.-+..
T Consensus        21 ~q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~s   65 (231)
T PRK08328         21 GQEKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELS   65 (231)
T ss_pred             HHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChh
Confidence            355678899999997 7999999999999996 7889987654433

>PRK08223 hypothetical protein; Validated

Probab=96.10  E-value=0.032  Score=52.87  Aligned_cols=44  Identities=18%  Similarity=0.151  Sum_probs=36.4

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHH
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSES   89 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~   89 (388)
                      .+.+.+++..+|+|.|+ ||+|..+++.|+..|. ++.++|.+.-+
T Consensus        19 ~e~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve   63 (287)
T PRK08223         19 PTEQQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFE   63 (287)
T ss_pred             HHHHHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcc
Confidence            34466788999999997 7999999999999996 78888876443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.07  E-value=0.043  Score=54.20  Aligned_cols=40  Identities=18%  Similarity=0.330  Sum_probs=35.0

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      +.+.++++++|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        34 ~~q~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         34 EQQERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3466788899999997 7999999999999995 89999886

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.05  E-value=0.053  Score=53.89  Aligned_cols=47  Identities=19%  Similarity=0.415  Sum_probs=42.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l   97 (388)
                      ++++|+++|.|| |-+|.-+|++|+++| .+|+++.|+.++.+++++++
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~  222 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL  222 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            379999999997 679999999999999 57999999999998887775

>PLN00203 glutamyl-tRNA reductase

Probab=96.05  E-value=0.024  Score=58.35  Aligned_cols=45  Identities=29%  Similarity=0.459  Sum_probs=40.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE   96 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~   96 (388)
                      +.+++++|.|+ |++|..+++.|..+|. +|+++.|+.++.+++.++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~  309 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE  309 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH
Confidence            78999999998 9999999999999996 799999999888766554

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.04  E-value=0.018  Score=50.41  Aligned_cols=43  Identities=23%  Similarity=0.365  Sum_probs=37.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      .+++||+++|.|++.-.|..+|+.|.++|++|.++.|+.+++.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~   82 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK   82 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence            4789999999999655799999999999999999999875544

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.04  E-value=0.034  Score=53.68  Aligned_cols=45  Identities=20%  Similarity=0.383  Sum_probs=38.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~   96 (388)
                      +.+++++|.|+ |.+|..+++.|.+.| .+|++++|++++.++++++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~  221 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE  221 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH
Confidence            68899999997 999999999999877 5799999999887766554

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.01  E-value=0.021  Score=53.84  Aligned_cols=82  Identities=22%  Similarity=0.200  Sum_probs=52.7

Q ss_pred             eccCCcccchHHHHHH-HHHHHHHHHhhhhhhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           13 QLSGGDSQMNALIWYS-WLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        13 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      .+-++|.+..++.|+. .|+.=..-+++.-....+   .-.|+|++|++|+|..|.-+.+.-.-+|++||.++-.++|.+
T Consensus       113 ~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igq---pk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~  189 (340)
T COG2130         113 GLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQ---PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCD  189 (340)
T ss_pred             hceecCCCCCCcchHHhhcCCchHHHHHHHHHhcC---CCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHH
Confidence            3445566666666653 333223333332222222   235999999999999998776655568999999999988876


Q ss_pred             HHHHHH
Q 016493           92 MTVTEL   97 (388)
Q Consensus        92 ~~~~~l   97 (388)
                      -+.+++
T Consensus       190 ~l~~~l  195 (340)
T COG2130         190 FLTEEL  195 (340)
T ss_pred             HHHHhc
Confidence            555443

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.00  E-value=0.026  Score=53.58  Aligned_cols=42  Identities=24%  Similarity=0.280  Sum_probs=37.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ++++++|+|+++++|.++++.+...|++|+.++++.++.+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999999987765543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.99  E-value=0.032  Score=53.54  Aligned_cols=42  Identities=26%  Similarity=0.324  Sum_probs=37.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .+++++|.|+++++|.++++.+.+.|++|+.++++.++.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~  186 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL  186 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999988765543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.98  E-value=0.15  Score=52.25  Aligned_cols=39  Identities=28%  Similarity=0.262  Sum_probs=33.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .++++|+|+|.|+ |++|.++|+.|+++|++|.+.+++..
T Consensus        12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~   50 (480)
T PRK01438         12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDD   50 (480)
T ss_pred             cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            4567899999996 78999999999999999999986543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.93  E-value=0.05  Score=47.94  Aligned_cols=46  Identities=26%  Similarity=0.244  Sum_probs=38.1

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ......+.||++.|.|. |.||+++|+.|...|++|+..+|+.....
T Consensus        28 ~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   28 RFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            33456889999999996 88999999999999999999999987543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.93  E-value=0.16  Score=49.03  Aligned_cols=116  Identities=14%  Similarity=0.152  Sum_probs=75.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ..+.|+|+ |.+|..+|..|+..|  ..+++.++++++++..+.++....+-             ... ......  .|+
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~-------------~~~-~~v~~~--~dy   66 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAF-------------LKN-PKIEAD--KDY   66 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhcc-------------CCC-CEEEEC--CCH
Confidence            46889996 999999999999888  47999999998887777777653211             011 111211  233


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++           ...|++|..||...  .+  ..+.   ...++.|    ..+++.+.+.+.+....+.++++|-
T Consensus        67 ~~~-----------~~adivvitaG~~~--k~--g~~R---~dll~~N----~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          67 SVT-----------ANSKVVIVTAGARQ--NE--GESR---LDLVQRN----VDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             HHh-----------CCCCEEEECCCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCcEEEEccC
Confidence            222           36899999999854  22  2333   2334444    4456667777777656778888763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.90  E-value=0.033  Score=61.65  Aligned_cols=78  Identities=21%  Similarity=0.244  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSG-DR-------------VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G-~~-------------Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      .+.|.|+|.|| |.+|...|+.|++.. +.             |.+++++.++++++.+..                   
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-------------------  626 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-------------------  626 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-------------------
Confidence            45789999997 889999999999764 33             888999988776654432                   


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                        ..+..+++|++|.+++.++++       ++|+||++...
T Consensus       627 --~~~~~v~lDv~D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        627 --ENAEAVQLDVSDSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             --CCCceEEeecCCHHHHHHhhc-------CCCEEEECCCc
Confidence              235678999999988776655       58999998864

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.89  E-value=0.059  Score=49.97  Aligned_cols=40  Identities=20%  Similarity=0.240  Sum_probs=33.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSE   88 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~   88 (388)
                      +..+++++|+|.|+ ||+|..+|+.|+..|. +++++|.+.-
T Consensus        19 q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~v   59 (240)
T TIGR02355        19 QEALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTV   59 (240)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcc
Confidence            45678899999996 7999999999999995 7888887643

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.87  E-value=0.067  Score=47.03  Aligned_cols=32  Identities=28%  Similarity=0.347  Sum_probs=28.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   87 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~   87 (388)
                      +|+|.|+ ||+|.++++.|++.|. ++.+.|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3788886 8999999999999997 699999876

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.87  E-value=0.047  Score=52.82  Aligned_cols=40  Identities=20%  Similarity=0.268  Sum_probs=35.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~   92 (388)
                      .|++++|+|+ +++|..+++.+...|++ |+++++++++.+.
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~  203 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL  203 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4899999986 89999999999899998 9999998887654

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.86  E-value=0.087  Score=44.48  Aligned_cols=31  Identities=26%  Similarity=0.454  Sum_probs=27.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788897 8999999999999997 78888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.76  E-value=0.16  Score=51.20  Aligned_cols=116  Identities=12%  Similarity=0.131  Sum_probs=77.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-------CC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           54 RNVVITGSTRGLGKALAREFLLS-------GD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~-------G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      -.|.|+|++|.+|.++|..|+..       |.  ++++.++++++++..+-+|......             ...++.+ 
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~-------------~~~~v~i-  166 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP-------------LLREVSI-  166 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh-------------hcCceEE-
Confidence            46999999999999999999988       63  7999999999999888888764311             0112211 


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc-CCCCcEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD-QPKGGHI  203 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~~~g~I  203 (388)
                      ..  .+++++           ..-|++|..||...  ++  ..+.   ...++.|.    .+.+...+.+.+ .+..+.|
T Consensus       167 ~~--~~ye~~-----------kdaDiVVitAG~pr--kp--G~tR---~dLl~~N~----~I~k~i~~~I~~~a~p~~iv  222 (444)
T PLN00112        167 GI--DPYEVF-----------QDAEWALLIGAKPR--GP--GMER---ADLLDING----QIFAEQGKALNEVASRNVKV  222 (444)
T ss_pred             ec--CCHHHh-----------CcCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhcCCCeEE
Confidence            11  233322           36899999999843  22  2232   34555554    456677777777 4456777


Q ss_pred             EEec
Q 016493          204 FNMD  207 (388)
Q Consensus       204 v~is  207 (388)
                      +++|
T Consensus       223 IVVs  226 (444)
T PLN00112        223 IVVG  226 (444)
T ss_pred             EEcC
Confidence            7775

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.76  E-value=0.056  Score=52.10  Aligned_cols=116  Identities=15%  Similarity=0.199  Sum_probs=69.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|.|+|++|.+|..+|..|+.+|.  ++++.++++  .+..+.+|...                . .......+.-.+  
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~----------------~-~~~~i~~~~~~~--   59 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHI----------------P-TAASVKGFSGEE--   59 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcC----------------C-cCceEEEecCCC--
Confidence            378999999999999999998884  799999876  22112222210                0 001111100001  


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +       ..+.+..-|++|..||...  .+  ..+   -...++.|..    +++...+.+.+....+.++++|-.
T Consensus        60 ~-------~~~~~~daDivvitaG~~~--~~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNP  118 (312)
T TIGR01772        60 G-------LENALKGADVVVIPAGVPR--KP--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNP  118 (312)
T ss_pred             c-------hHHHcCCCCEEEEeCCCCC--CC--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCc
Confidence            0       1122347899999999843  22  222   2345666655    667777777776567778777643

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.74  E-value=0.059  Score=44.56  Aligned_cols=76  Identities=24%  Similarity=0.413  Sum_probs=54.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHH-CCCeEE-EEeCCh----------------------HHHHHHHHHHHHHHhhhhhhcCC
Q 016493           55 NVVITGSTRGLGKALAREFLL-SGDRVV-VASRSS----------------------ESVRMTVTELEENLKEGMMAAGG  110 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~-~G~~Vi-l~~R~~----------------------~~l~~~~~~l~~~~~~~~~~~~~  110 (388)
                      .|+|.|++|-+|+++++.+.+ .|.+++ .++|+.                      +.+++..++              
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--------------   67 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--------------   67 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--------------
Confidence            489999999999999999999 677765 456766                      122222111              


Q ss_pred             CCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       111 ~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                              ..   +..|.|.++.+.+.++.+.+.  ++.+++-..|.
T Consensus        68 --------~D---VvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   68 --------AD---VVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ---------S---EEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             --------CC---EEEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence                    11   567999999999999988776  78899988886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.71  E-value=0.059  Score=43.53  Aligned_cols=71  Identities=25%  Similarity=0.303  Sum_probs=52.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.+                       ..+.++..|.++++.++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-----------------------~~~~~i~gd~~~~~~l~   56 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-----------------------EGVEVIYGDATDPEVLE   56 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-----------------------TTSEEEES-TTSHHHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-----------------------cccccccccchhhhHHh
Confidence            578887 579999999999977899999999987654422                       12668899999998876


Q ss_pred             HHHHHHHhhcCCccEEEEccc
Q 016493          136 KLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ++-      ..+.|.+|...+
T Consensus        57 ~a~------i~~a~~vv~~~~   71 (116)
T PF02254_consen   57 RAG------IEKADAVVILTD   71 (116)
T ss_dssp             HTT------GGCESEEEEESS
T ss_pred             hcC------ccccCEEEEccC
Confidence            642      136788877664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.70  E-value=0.051  Score=55.02  Aligned_cols=39  Identities=23%  Similarity=0.358  Sum_probs=34.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   94 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~   94 (388)
                      +++|.|+ |.+|.++++.|.++|+.|+++++++++.+++.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~   40 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ   40 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            5888897 89999999999999999999999998766543

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.63  E-value=0.058  Score=53.14  Aligned_cols=41  Identities=12%  Similarity=0.278  Sum_probs=35.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|+|+ ++||...++.+...|+ +|+.+++++++++.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a  226 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA  226 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5899999986 8999999998888998 799999998876544

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.63  E-value=0.037  Score=52.67  Aligned_cols=110  Identities=19%  Similarity=0.096  Sum_probs=69.7

Q ss_pred             eccCCcccchHHHHHHHHHHHHHHHhhhhhhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           13 QLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      |-..|-.++++-..    +.+++......+-..+..+. .|+++.|+|++| ||.--++---+-|++|+.+++...+-++
T Consensus       147 ~a~kIP~~~pl~~a----APlLCaGITvYspLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkee  220 (360)
T KOG0023|consen  147 FAIKIPENLPLASA----APLLCAGITVYSPLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEE  220 (360)
T ss_pred             eEEECCCCCChhhc----cchhhcceEEeehhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHH
Confidence            34455555555444    34444444444444455566 899999999977 9976666655679999999999877777


Q ss_pred             HHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC-CHHHHHHHHHHHHhhcCCccEEEEc
Q 016493           93 TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-EPADVQKLSNFAVNEFGSIDIWINN  154 (388)
Q Consensus        93 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls-~~~~v~~~~~~i~~~~g~iD~li~n  154 (388)
                      +.+.|-                    +..   -.|.+ |++.++++.+..   .+.+|.++|-
T Consensus       221 a~~~LG--------------------Ad~---fv~~~~d~d~~~~~~~~~---dg~~~~v~~~  257 (360)
T KOG0023|consen  221 AIKSLG--------------------ADV---FVDSTEDPDIMKAIMKTT---DGGIDTVSNL  257 (360)
T ss_pred             HHHhcC--------------------cce---eEEecCCHHHHHHHHHhh---cCcceeeeec
Confidence            766652                    222   23666 777777666533   1345555544

>PLN02602 lactate dehydrogenase

Probab=95.63  E-value=0.24  Score=48.53  Aligned_cols=115  Identities=15%  Similarity=0.218  Sum_probs=75.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +.+.|+|+ |.+|..+|..|+.+|  ..+++.+.++++++..+.++.....-             .+ ...+ .. -.|+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~-------------~~-~~~i-~~-~~dy  100 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAF-------------LP-RTKI-LA-STDY  100 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhc-------------CC-CCEE-Ee-CCCH
Confidence            68999996 899999999999888  37999999998888777777653211             11 1111 11 1122


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++           ...-|++|..||...  .+  ..+..   ..+..|    ..+.+.+.+.+.+....+.++++|
T Consensus       101 ~~-----------~~daDiVVitAG~~~--k~--g~tR~---dll~~N----~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        101 AV-----------TAGSDLCIVTAGARQ--IP--GESRL---NLLQRN----VALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             HH-----------hCCCCEEEECCCCCC--Cc--CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence            22           236899999999853  22  22322   333333    456667777777665677788875

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.61  E-value=0.044  Score=52.30  Aligned_cols=41  Identities=24%  Similarity=0.293  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .+.+++|+|+++++|.++++.+...|++|+.+++++++.+.
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~  182 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL  182 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            47899999999999999999999999999999998876544

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.60  E-value=0.3  Score=46.85  Aligned_cols=113  Identities=19%  Similarity=0.250  Sum_probs=72.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +.|.|+ |++|..+|..|+..|  .++++.++++++++....+|.+....             . ........  .|.++
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~-------------~-~~~~i~~~--~~~~~   63 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAF-------------L-ATGTIVRG--GDYAD   63 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccc-------------c-CCCeEEEC--CCHHH
Confidence            357787 679999999999999  67999999999888888887663211             0 11111111  22222


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                                 ...-|++|..+|...  .+  ..+.   ...+..    ...+++.+.+.+++....+.++++|
T Consensus        64 -----------l~~aDiVIitag~p~--~~--~~~R---~~l~~~----n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          64 -----------AADADIVVITAGAPR--KP--GETR---LDLINR----NAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             -----------hCCCCEEEEcCCCCC--CC--CCCH---HHHHHH----HHHHHHHHHHHHHHhCCCeEEEEcc
Confidence                       236899999999843  21  2232   233333    3456677777777765677887775

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK04148 hypothetical protein; Provisional

Probab=95.55  E-value=0.037  Score=46.33  Aligned_cols=56  Identities=18%  Similarity=0.208  Sum_probs=44.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +++.+++.|.+  -|.++|+.|++.|++|+.++.+++..+.+.+                       ..+.++..|+.++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-----------------------~~~~~v~dDlf~p   70 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-----------------------LGLNAFVDDLFNP   70 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------------------hCCeEEECcCCCC
Confidence            56889999987  7888999999999999999999986554322                       2356788898875


Q ss_pred             H
Q 016493          132 A  132 (388)
Q Consensus       132 ~  132 (388)
                      +
T Consensus        71 ~   71 (134)
T PRK04148         71 N   71 (134)
T ss_pred             C
Confidence            4

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.53  E-value=0.064  Score=53.81  Aligned_cols=43  Identities=23%  Similarity=0.281  Sum_probs=38.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ...+.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            34678999999997 68999999999999999999999987653

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.51  E-value=0.011  Score=53.50  Aligned_cols=39  Identities=23%  Similarity=0.315  Sum_probs=34.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ++++||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4689999999996 67999999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.47  E-value=0.086  Score=47.35  Aligned_cols=39  Identities=21%  Similarity=0.473  Sum_probs=32.2

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      .+..++.++|+|.|+ +|+|.++++.|+..|. ++.++|.+
T Consensus        15 ~Q~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          15 AQKRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            345677899999986 6699999999999996 68888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK05442 malate dehydrogenase; Provisional

Probab=95.47  E-value=0.12  Score=50.12  Aligned_cols=118  Identities=13%  Similarity=0.146  Sum_probs=71.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEE
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  122 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  122 (388)
                      +.+.+.|+|++|.+|..+|..|+..|.       .+++.++++  ++++..+.++......             ....+.
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~-------------~~~~~~   69 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFP-------------LLAGVV   69 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhh-------------hcCCcE
Confidence            356899999999999999999998773       699999854  3355444455432100             001111


Q ss_pred             EEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCc
Q 016493          123 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGG  201 (388)
Q Consensus       123 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g  201 (388)
                      . ..  .++           +.+..-|++|..||...  .+  ..+.   ...++.|    ..+.+.+.+.+.+.. ..+
T Consensus        70 i-~~--~~y-----------~~~~daDiVVitaG~~~--k~--g~tR---~dll~~N----a~i~~~i~~~i~~~~~~~~  124 (326)
T PRK05442         70 I-TD--DPN-----------VAFKDADVALLVGARPR--GP--GMER---KDLLEAN----GAIFTAQGKALNEVAARDV  124 (326)
T ss_pred             E-ec--ChH-----------HHhCCCCEEEEeCCCCC--CC--CCcH---HHHHHHH----HHHHHHHHHHHHHhCCCCe
Confidence            1 11  111           22346899999999743  22  2232   3445555    356677777777733 467


Q ss_pred             EEEEec
Q 016493          202 HIFNMD  207 (388)
Q Consensus       202 ~Iv~is  207 (388)
                      .++++|
T Consensus       125 iiivvs  130 (326)
T PRK05442        125 KVLVVG  130 (326)
T ss_pred             EEEEeC
Confidence            777775

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.43  E-value=0.044  Score=46.37  Aligned_cols=45  Identities=13%  Similarity=0.197  Sum_probs=39.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      ..+++||.++|.|.|.-.|+.++..|.++|++|.++.++...+++
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            468999999999999999999999999999999999876554443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.43  E-value=0.12  Score=44.71  Aligned_cols=92  Identities=18%  Similarity=0.142  Sum_probs=57.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +++-+.|- |-+|..+|++|+++|++|.+.+|++++.+++.++-....        .+ ..+ .-.+..++-.=+.+.++
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~--------~s-~~e-~~~~~dvvi~~v~~~~~   70 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA--------DS-PAE-AAEQADVVILCVPDDDA   70 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE--------SS-HHH-HHHHBSEEEE-SSSHHH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh--------hh-hhh-HhhcccceEeecccchh
Confidence            46777886 789999999999999999999999988876654310000        00 000 01223455666788888


Q ss_pred             HHHHHHH--HHhhcCCccEEEEccc
Q 016493          134 VQKLSNF--AVNEFGSIDIWINNAG  156 (388)
Q Consensus       134 v~~~~~~--i~~~~g~iD~li~nAG  156 (388)
                      +++++..  +.....+=+++|+..-
T Consensus        71 v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   71 VEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhhhhhhHHhhccccceEEEecCC
Confidence            9888887  6555544556665553

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.42  E-value=0.16  Score=47.02  Aligned_cols=115  Identities=14%  Similarity=0.128  Sum_probs=74.7

Q ss_pred             eeccCCcccchHHHHHHHHHHHHHHHhhhhhhhhhcccCC-CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 016493           12 FQLSGGDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKA-GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   90 (388)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l   90 (388)
                      .|..++.|.+.+-++-..+.-.+-     ..+.+++...+ .|-+|||--|.||.|..+++.+-..|+++|.+..+.++.
T Consensus       110 ~kv~~vpe~i~~k~aaa~llq~lT-----Ay~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~  184 (336)
T KOG1197|consen  110 VKVFKVPEAITLKEAAALLLQGLT-----AYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKH  184 (336)
T ss_pred             eeeccCCcccCHHHHHHHHHHHHH-----HHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHH
Confidence            466777788777666444433333     33333433333 488999999999999999999999999999999888876


Q ss_pred             HHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493           91 RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus        91 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+.+.                     +. -  ...|.+.++-++++.+-..  -.++|++.-..|.
T Consensus       185 ~~aken---------------------G~-~--h~I~y~~eD~v~~V~kiTn--gKGVd~vyDsvG~  225 (336)
T KOG1197|consen  185 EIAKEN---------------------GA-E--HPIDYSTEDYVDEVKKITN--GKGVDAVYDSVGK  225 (336)
T ss_pred             HHHHhc---------------------CC-c--ceeeccchhHHHHHHhccC--CCCceeeeccccc
Confidence            543221                     11 1  2346666555554443221  1358999877775

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.42  E-value=0.17  Score=49.37  Aligned_cols=41  Identities=22%  Similarity=0.319  Sum_probs=36.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++++|.|+ +++|..+++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5899999999 9999999999989999999999998877543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.40  E-value=0.2  Score=48.23  Aligned_cols=116  Identities=17%  Similarity=0.244  Sum_probs=68.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|+|++|.+|.++|..|+.+|  .++++.+.+  +++..+-+|....               ....+..  +. .+ +
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~---------------~~~~i~~--~~-~~-~   60 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN---------------TPAKVTG--YL-GP-E   60 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC---------------CcceEEE--ec-CC-C
Confidence            57899999999999999999888  479999988  4433333443310               0011211  10 11 0


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      ++       .+.+...|++|..||...  .+  ..+   -...++.|..    +++...+.+.+....+.++++|-.
T Consensus        61 ~~-------y~~~~daDivvitaG~~~--k~--g~t---R~dll~~N~~----i~~~i~~~i~~~~p~a~vivvtNP  119 (310)
T cd01337          61 EL-------KKALKGADVVVIPAGVPR--KP--GMT---RDDLFNINAG----IVRDLATAVAKACPKALILIISNP  119 (310)
T ss_pred             ch-------HHhcCCCCEEEEeCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCc
Confidence            01       122246899999999843  22  222   2345555644    445556666655557788888643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.38  E-value=0.069  Score=52.54  Aligned_cols=79  Identities=14%  Similarity=0.224  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|++++|.|+ +++|...++.+...|+ +|+.+++++++++.+ +++                    +.. .  ..|..+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l--------------------Ga~-~--~i~~~~  240 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF--------------------GAT-D--CVNPKD  240 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc--------------------CCC-E--EEcccc
Confidence            5899999985 8999999999989999 699999998877543 222                    121 1  124333


Q ss_pred             H-HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 P-ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~-~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      . +++.+.+.++..  +++|+++.+.|.
T Consensus       241 ~~~~~~~~v~~~~~--~g~d~vid~~g~  266 (368)
T cd08300         241 HDKPIQQVLVEMTD--GGVDYTFECIGN  266 (368)
T ss_pred             cchHHHHHHHHHhC--CCCcEEEECCCC
Confidence            2 234444444433  369999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02740 Alcohol dehydrogenase-like

Probab=95.38  E-value=0.11  Score=51.54  Aligned_cols=41  Identities=20%  Similarity=0.234  Sum_probs=35.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|.|+ +++|..+++.+...|+ +|+.+++++++++.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a  239 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG  239 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence            5899999996 8999999998889998 699999998876644

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.37  E-value=0.13  Score=46.12  Aligned_cols=38  Identities=24%  Similarity=0.479  Sum_probs=31.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      +..++..+|+|.|+ +|+|.++++.|+..|. ++.+++.+
T Consensus        14 q~~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          14 QNKLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            34567789999987 5699999999999996 68888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.33  E-value=0.19  Score=48.78  Aligned_cols=116  Identities=16%  Similarity=0.158  Sum_probs=71.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      -.|.|+|++|.+|..+|..|+..|.       .+++.++++  ++++..+.++......             ....+. +
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-------------~~~~~~-i   69 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP-------------LLAGVV-A   69 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc-------------ccCCcE-E
Confidence            4689999999999999999998883       799999965  4455555555442100             000111 1


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHI  203 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~I  203 (388)
                      ..  .++++           ...-|++|..||...  .+  ..+.   ...++.|.    .+++.+.+.+.+... .+.+
T Consensus        70 ~~--~~~~~-----------~~daDvVVitAG~~~--k~--g~tR---~dll~~Na----~i~~~i~~~i~~~~~~~~ii  125 (323)
T TIGR01759        70 TT--DPEEA-----------FKDVDAALLVGAFPR--KP--GMER---ADLLSKNG----KIFKEQGKALNKVAKKDVKV  125 (323)
T ss_pred             ec--ChHHH-----------hCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHH----HHHHHHHHHHHhhCCCCeEE
Confidence            11  12222           236899999999843  22  2232   34555554    456667777776644 6777


Q ss_pred             EEec
Q 016493          204 FNMD  207 (388)
Q Consensus       204 v~is  207 (388)
                      +++|
T Consensus       126 ivvs  129 (323)
T TIGR01759       126 LVVG  129 (323)
T ss_pred             EEeC
Confidence            7775

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.24  E-value=0.097  Score=53.02  Aligned_cols=38  Identities=13%  Similarity=0.238  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .+.+|+++|+|.+ |+|.++|+.|+++|++|++.++++.
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3578999999985 9999999999999999999987654

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.21  E-value=0.064  Score=47.42  Aligned_cols=46  Identities=26%  Similarity=0.426  Sum_probs=38.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL  101 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~  101 (388)
                      +|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+++..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l   46 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLL   46 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHH
Confidence            4778887 889999999999999999999999999988888776643

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.18  E-value=0.1  Score=49.85  Aligned_cols=42  Identities=21%  Similarity=0.316  Sum_probs=37.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .+++++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            468999999999999999999999999999999998776544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.10  E-value=0.29  Score=47.04  Aligned_cols=116  Identities=19%  Similarity=0.293  Sum_probs=71.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-C-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG-D-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G-~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +.|.|+|+ |++|.++|..|+.++ . .+++.+.++++++-.+.+|......             .... ..+..| .+.
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~-------------~~~~-~~i~~~-~~y   64 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAP-------------LGSD-VKITGD-GDY   64 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchh-------------ccCc-eEEecC-CCh
Confidence            35889999 999999999998887 3 7999999977776666666442211             0111 112222 222


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++           ..-|++|..||...  +|-  ++.   ...++.|..    +.+.+.+.+.+....+.++++|
T Consensus        65 ~~~-----------~~aDiVvitAG~pr--KpG--mtR---~DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          65 EDL-----------KGADIVVITAGVPR--KPG--MTR---LDLLEKNAK----IVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             hhh-----------cCCCEEEEeCCCCC--CCC--CCH---HHHHHhhHH----HHHHHHHHHHhhCCCeEEEEec
Confidence            322           36899999999854  222  232   345555644    4455555555554456666664

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.09  E-value=0.068  Score=48.72  Aligned_cols=43  Identities=23%  Similarity=0.448  Sum_probs=37.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (388)
                      ++.|.||+|.+|.++++.|++.|++|++.+|++++.++..++.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            4889998899999999999999999999999998877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14851 hypothetical protein; Provisional

Probab=95.08  E-value=0.13  Score=54.65  Aligned_cols=42  Identities=21%  Similarity=0.257  Sum_probs=34.8

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      ..+.+.++++++|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        34 g~e~Q~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         34 TPGEQERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             CHHHHHHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            334566788999999995 7999999999999996 78888764

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.06  E-value=0.097  Score=49.99  Aligned_cols=42  Identities=17%  Similarity=0.109  Sum_probs=36.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|.|+++++|.++++.....|++|+.+.++.++.+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            578999999999999999999999999999998887765443

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.04  E-value=0.24  Score=48.37  Aligned_cols=39  Identities=31%  Similarity=0.400  Sum_probs=34.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   91 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~   91 (388)
                      .|++++|+| ++++|.++++.+...|+ +|+++++++++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            689999997 59999999998889999 9999998877654

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.03  E-value=0.4  Score=46.18  Aligned_cols=113  Identities=20%  Similarity=0.256  Sum_probs=69.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|.|+ |.+|..+|..|+.+|  .+|++.++++++++..+.++.....              .........   .+.+
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~--------------~~~~~~i~~---~d~~   63 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP--------------FVKPVRIYA---GDYA   63 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccc--------------ccCCeEEee---CCHH
Confidence            3788897 889999999999999  5899999998887655555543210              001111111   2222


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           ....|++|.++|...  .+  ..+.   ...+..|    ..+.+.+.+.+.+....|.+++++
T Consensus        64 ~-----------l~~aDiViita~~~~--~~--~~~r---~dl~~~n----~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          64 D-----------CKGADVVVITAGANQ--KP--GETR---LDLLKRN----VAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             H-----------hCCCCEEEEccCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence            1           236899999999743  21  1222   2334434    445566666666665567777775

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.03  E-value=0.8  Score=44.09  Aligned_cols=115  Identities=19%  Similarity=0.189  Sum_probs=74.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccC-ceEEEEEccCCCHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH-AKVAGIACDVCEPA  132 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~Dls~~~  132 (388)
                      +.|.|+ |.+|..+|..|+.+|.  ++++.+.++++++..+.+|.....-             .. ..+....   .|++
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~-------------~~~~~~~i~~---~~y~   64 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATAL-------------TYSTNTKIRA---GDYD   64 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhcc-------------CCCCCEEEEE---CCHH
Confidence            678898 9999999999999883  7999999998887777777653210             11 1233332   2333


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++           ..-|++|..||...  .|  ..+.+ -...++.|    ..+++...|.+.+....+.++++|
T Consensus        65 ~~-----------~~aDivvitaG~~~--kp--g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          65 DC-----------ADADIIVITAGPSI--DP--GNTDD-RLDLAQTN----AKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             Hh-----------CCCCEEEECCCCCC--CC--CCCch-HHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEec
Confidence            22           36899999999843  22  22211 12334444    467788888888776566666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.01  E-value=0.093  Score=51.55  Aligned_cols=41  Identities=24%  Similarity=0.221  Sum_probs=33.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|.|+ +++|..+++.+...|++|++++.+.++..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~  223 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA  223 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence            6899999775 8999999998889999998888776654433

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.00  E-value=0.59  Score=44.83  Aligned_cols=116  Identities=14%  Similarity=0.225  Sum_probs=68.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +.+.|.|+ |-+|..+|..++..|. +|++.++++++++....++.+....           .....++.   . -+|.+
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~-----------~~~~~~i~---~-~~d~~   66 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPV-----------EGFDTKIT---G-TNDYE   66 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhh-----------cCCCcEEE---e-CCCHH
Confidence            57899998 8899999999999875 9999999988765544444332110           00011111   1 12222


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           ....|++|.++|...  .+  ..+.   ...+.-    ...+.+.+.+.+.+....+.+++++
T Consensus        67 ~-----------~~~aDiVii~~~~p~--~~--~~~r---~~~~~~----n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         67 D-----------IAGSDVVVITAGVPR--KP--GMSR---DDLLGI----NAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             H-----------HCCCCEEEECCCCCC--Cc--CCCH---HHHHHH----HHHHHHHHHHHHHHHCCCeEEEEec
Confidence            1           136899999999743  22  2222   222233    3355666666666654456677664

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.00  E-value=0.39  Score=47.63  Aligned_cols=117  Identities=14%  Similarity=0.135  Sum_probs=73.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-e----EEE----EeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-R----VVV----ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-~----Vil----~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      .-.|.|+||+|.+|..+|..|+..|. .    |.+    .++++++++..+-+|......             ....+..
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~-------------~~~~v~i  110 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYP-------------LLREVSI  110 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhh-------------hcCceEE
Confidence            45799999999999999999998883 3    444    488999988888887764311             0012221


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH  202 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~  202 (388)
                       ..  .+.+++           ...|++|..||...  .+  ..+.   ...++.|.    .+.+...+.+.+. +..+.
T Consensus       111 -~~--~~y~~~-----------kdaDIVVitAG~pr--kp--g~tR---~dll~~N~----~I~k~i~~~I~~~a~~~~i  165 (387)
T TIGR01757       111 -GI--DPYEVF-----------EDADWALLIGAKPR--GP--GMER---ADLLDING----QIFADQGKALNAVASKNCK  165 (387)
T ss_pred             -ec--CCHHHh-----------CCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCCeE
Confidence             11  222222           36899999999843  22  2222   33455553    4566667777663 24566


Q ss_pred             EEEec
Q 016493          203 IFNMD  207 (388)
Q Consensus       203 Iv~is  207 (388)
                      |+++|
T Consensus       166 viVVs  170 (387)
T TIGR01757       166 VLVVG  170 (387)
T ss_pred             EEEcC
Confidence            77765

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.99  E-value=0.1  Score=52.84  Aligned_cols=77  Identities=19%  Similarity=0.224  Sum_probs=58.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ...++++|.|+ |.+|..+++.|.++|++|+++++++++.+++.++.                     ..+.++..|.++
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~---------------------~~~~~i~gd~~~  286 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL---------------------PNTLVLHGDGTD  286 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC---------------------CCCeEEECCCCC
Confidence            45789999998 89999999999999999999999988765543321                     235678899999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      .+.++++-      ..+.|.+|...
T Consensus       287 ~~~L~~~~------~~~a~~vi~~~  305 (453)
T PRK09496        287 QELLEEEG------IDEADAFIALT  305 (453)
T ss_pred             HHHHHhcC------CccCCEEEECC
Confidence            87765431      23578877654

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.97  E-value=0.17  Score=48.03  Aligned_cols=41  Identities=24%  Similarity=0.305  Sum_probs=36.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .|.+++|.|+++++|.++++.....|++|+.+.+++++.+.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  182 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL  182 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57999999999999999999999999999999988776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.97  E-value=0.069  Score=46.18  Aligned_cols=43  Identities=26%  Similarity=0.298  Sum_probs=33.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ++.+.||+++|.|- |-+|+.+|+.|...|++|+++..++-++-
T Consensus        18 ~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   18 NLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             ceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            47889999999996 78999999999999999999999986543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.96  E-value=0.11  Score=49.11  Aligned_cols=41  Identities=27%  Similarity=0.393  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .|++++|+|+++++|.++++.+...|++|+.++++.++.+.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL  179 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence            57899999999999999999999999999999998776543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.93  E-value=0.17  Score=48.73  Aligned_cols=32  Identities=22%  Similarity=0.531  Sum_probs=27.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   87 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~   87 (388)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            3788886 8999999999999996 788888654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.90  E-value=0.12  Score=50.68  Aligned_cols=41  Identities=20%  Similarity=0.258  Sum_probs=35.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+|+|.|+ +++|..+++.+...|+ +|+.+++++++.+.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5899999986 8999999998888998 799999998876543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.88  E-value=0.077  Score=50.32  Aligned_cols=43  Identities=16%  Similarity=0.314  Sum_probs=38.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   90 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l   90 (388)
                      ..+++||.++|.|.|.=+|+-+|+.|.++|++|.++.++...+
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l  195 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM  195 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            4579999999999998899999999999999999988865443

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.85  E-value=0.16  Score=49.65  Aligned_cols=39  Identities=26%  Similarity=0.348  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC---ChHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASR---SSESVR   91 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R---~~~~l~   91 (388)
                      .|++|+|+|+ |++|...++.+...|++|++++|   ++++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~  213 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD  213 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH
Confidence            6889999986 99999999888889999999998   445443

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.84  E-value=0.17  Score=50.68  Aligned_cols=42  Identities=17%  Similarity=0.105  Sum_probs=35.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~---~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|.|+++++|...++.+...|+   +|+++++++++++.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            478999999999999998887666654   799999999887654

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.83  E-value=0.12  Score=54.02  Aligned_cols=72  Identities=14%  Similarity=0.172  Sum_probs=53.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .+++|.|+ |.+|+.++++|.++|++|+++++|+++.++..+                       ....++..|.+|++.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-----------------------~g~~~i~GD~~~~~~  473 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-----------------------RGIRAVLGNAANEEI  473 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----------------------CCCeEEEcCCCCHHH
Confidence            46788886 669999999999999999999999887655421                       236678999999887


Q ss_pred             HHHHHHHHHhhcCCccEEEEcc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      .+++-      ..+.|.++...
T Consensus       474 L~~a~------i~~a~~viv~~  489 (558)
T PRK10669        474 MQLAH------LDCARWLLLTI  489 (558)
T ss_pred             HHhcC------ccccCEEEEEc
Confidence            65521      12567666554

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.81  E-value=0.11  Score=48.87  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      +|++++|.|+++++|.++++.+...|++|+.+++++++.+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57999999999999999999999999999999988876544

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=94.80  E-value=0.12  Score=53.94  Aligned_cols=37  Identities=19%  Similarity=0.253  Sum_probs=32.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      -.+++.+|+|.|+ ||+|..+|+.|++.|. ++++++.+
T Consensus       334 ekL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       334 ERYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             HHHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4577899999997 8899999999999996 78888763

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.79  E-value=0.13  Score=50.80  Aligned_cols=38  Identities=34%  Similarity=0.338  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   90 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l   90 (388)
                      .|++++|.|+ +++|..+++.....|++|++++++.++.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~  215 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKE  215 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHh
Confidence            6899999986 8999999998889999999998876543

>PLN02494 adenosylhomocysteinase

Probab=94.79  E-value=0.23  Score=50.22  Aligned_cols=41  Identities=24%  Similarity=0.306  Sum_probs=36.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   90 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l   90 (388)
                      ..+.||+++|.|. |.||+.+|+.+...|++|+++++++.+.
T Consensus       250 i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        250 VMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             CccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            4578999999997 5899999999999999999999988654

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.76  E-value=0.24  Score=47.32  Aligned_cols=42  Identities=24%  Similarity=0.337  Sum_probs=36.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|+|+++++|.++++.+.+.|++++++.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999988888887765543

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.75  E-value=0.13  Score=49.11  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=36.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      ..|.+++|.|+++++|.++++.+...|++|+.+.++.++.+.
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  178 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE  178 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence            357899999999999999999999999999999988876543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.72  E-value=0.21  Score=48.06  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=37.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .+.+++|.|+++.+|.++++.+...|++|+.++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999988876554

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.71  E-value=0.19  Score=48.22  Aligned_cols=42  Identities=21%  Similarity=0.287  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +|.+++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            578999999999999999999889999999999887765433

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.67  E-value=0.5  Score=45.98  Aligned_cols=41  Identities=17%  Similarity=0.159  Sum_probs=36.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   90 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l   90 (388)
                      ..++|+++.|.|. |.||+++|+.|...|++|+..+|+++..
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~  182 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKD  182 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHh
Confidence            4689999999996 6799999999999999999999987643

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.63  E-value=0.3  Score=46.92  Aligned_cols=41  Identities=24%  Similarity=0.325  Sum_probs=34.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMT   93 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~   93 (388)
                      |.+++|+|+++++|.++++..... |++|+.+.+++++.+.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            889999999999999998776666 99999998887765443

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.63  E-value=0.18  Score=49.26  Aligned_cols=41  Identities=17%  Similarity=0.324  Sum_probs=34.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~~   93 (388)
                      .|++++|.|+ +++|..+++.+...|++ |+.+++++++++.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5889999985 89999999988889985 88899988876544

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.61  E-value=0.22  Score=49.05  Aligned_cols=40  Identities=18%  Similarity=0.321  Sum_probs=34.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      .|++|+|+|+ +++|..+++.+...|+ +|+++++++++++.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~  231 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLAL  231 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHH
Confidence            5789999985 8999999988888999 69999998887653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.61  E-value=0.16  Score=49.03  Aligned_cols=42  Identities=26%  Similarity=0.293  Sum_probs=37.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+.+++++.+.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  206 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA  206 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999998766533

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.58  E-value=0.28  Score=46.18  Aligned_cols=39  Identities=28%  Similarity=0.326  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVR   91 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~   91 (388)
                      .|++++|.|+ +++|..+++.+...|++ |+++++++++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            7899999987 89999999988889986 888888877664

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.58  E-value=0.081  Score=47.70  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=34.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      ++++||.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5789999999997 7899999999999999999998764

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.58  E-value=0.31  Score=44.98  Aligned_cols=32  Identities=25%  Similarity=0.445  Sum_probs=27.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH
Q 016493           56 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSE   88 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~   88 (388)
                      |+|.| .||+|.++++.|+..|. ++.++|.+.-
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~V   34 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTI   34 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEE
Confidence            67888 58999999999999996 7888887543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK07411 hypothetical protein; Validated

Probab=94.52  E-value=0.2  Score=49.98  Aligned_cols=39  Identities=21%  Similarity=0.290  Sum_probs=33.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      .+.+++..+|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        32 ~q~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         32 GQKRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HHHHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            356778899999997 7899999999999996 78888774

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.51  E-value=0.14  Score=49.24  Aligned_cols=41  Identities=29%  Similarity=0.394  Sum_probs=33.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +++++++||++++|..+++.....|++|+.+++++++.+.+
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~  184 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL  184 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            35555569999999999988888899999999988776543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.51  E-value=0.15  Score=49.60  Aligned_cols=40  Identities=13%  Similarity=0.250  Sum_probs=34.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      .|++++|+|+ +++|..+++.+...|+ +|+++++++++.+.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~  212 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARREL  212 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            5899999985 8999999999999999 78888888877653

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.43  E-value=0.11  Score=40.34  Aligned_cols=40  Identities=38%  Similarity=0.527  Sum_probs=32.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC---CeEEEE-eCChHHHHHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG---DRVVVA-SRSSESVRMTVTE   96 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G---~~Vil~-~R~~~~l~~~~~~   96 (388)
                      +.|. |+|.+|.++++.|++.|   .+|.+. +|++++.+++.++
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~   45 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKE   45 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHH
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHh
Confidence            3444 56899999999999999   899966 9999988776654

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK07877 hypothetical protein; Provisional

Probab=94.42  E-value=0.19  Score=53.83  Aligned_cols=39  Identities=23%  Similarity=0.345  Sum_probs=33.8

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCC
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRS   86 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~   86 (388)
                      +.+.++++++|+|.|+  |+|..+|..|+..|.  ++++++.+
T Consensus       100 ~~Q~~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D  140 (722)
T PRK07877        100 EEQERLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFD  140 (722)
T ss_pred             HHHHHHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCC
Confidence            4567889999999999  399999999999994  89998874

>PRK14030 glutamate dehydrogenase; Provisional

Probab=94.41  E-value=1.2  Score=44.84  Aligned_cols=35  Identities=20%  Similarity=0.178  Sum_probs=31.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA   83 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~   83 (388)
                      ..+++|++|+|.| .|..|..+|+.|.+.|++|+.+
T Consensus       223 g~~l~g~~vaIQG-fGnVG~~aA~~L~e~GakvVav  257 (445)
T PRK14030        223 GIDIKGKTVAISG-FGNVAWGAATKATELGAKVVTI  257 (445)
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEE
Confidence            4579999999999 6899999999999999999983

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.41  E-value=0.039  Score=44.04  Aligned_cols=38  Identities=24%  Similarity=0.294  Sum_probs=32.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      ++++||.++|.|+ |.+|..=++.|++.|++|.+++.+.
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            5789999999997 8899999999999999999999986

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=94.37  E-value=0.32  Score=45.71  Aligned_cols=92  Identities=18%  Similarity=0.281  Sum_probs=58.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEe--C-----ChHHH----HHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFL-LSGDRVVVAS--R-----SSESV----RMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La-~~G~~Vil~~--R-----~~~~l----~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      +.-..|.|||.|+|+|-|++.--..+ .-|++-+.+.  |     ++-..    ....++..+   +             
T Consensus        37 ~~ngPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~---~-------------  100 (398)
T COG3007          37 IKNGPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAK---Q-------------  100 (398)
T ss_pred             ccCCCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHH---h-------------
Confidence            44467999999999999987433322 1456655442  2     11110    111111111   1             


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      .+--..-+..|.-+.+--+..++.+.+.+|++|.+|+.-.
T Consensus       101 kGlyAksingDaFS~e~k~kvIe~Ik~~~g~vDlvvYSlA  140 (398)
T COG3007         101 KGLYAKSINGDAFSDEMKQKVIEAIKQDFGKVDLVVYSLA  140 (398)
T ss_pred             cCceeeecccchhhHHHHHHHHHHHHHhhccccEEEEecc
Confidence            2344566778988888888899999999999999988654

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.35  E-value=0.26  Score=49.18  Aligned_cols=40  Identities=15%  Similarity=0.200  Sum_probs=33.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   87 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~   87 (388)
                      .+..++..+|+|.|+ ||+|..+|+.|+..|. ++.++|.+.
T Consensus        36 ~q~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~   76 (392)
T PRK07878         36 GQKRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDV   76 (392)
T ss_pred             HHHHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            345678899999997 7999999999999996 788887653

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.34  E-value=0.15  Score=48.26  Aligned_cols=44  Identities=20%  Similarity=0.222  Sum_probs=37.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE   96 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~   96 (388)
                      .+|+++|.|+ ||-+++++..|++.|. +|.+++|+.++.+++.++
T Consensus       121 ~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        121 PDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            3578999996 8999999999999997 699999999888766543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.32  E-value=0.092  Score=50.13  Aligned_cols=44  Identities=20%  Similarity=0.252  Sum_probs=39.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ..+++||+++|.|.|+-+|+-+|..|.++|++|.++.|+...++
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            46899999999999999999999999999999999977665443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.32  E-value=0.11  Score=51.86  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=39.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +..+.|++|+|.|+ |.||+.+++.+...|++|+++++++.+++.+
T Consensus       197 ~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         197 DVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            34678999999997 5899999999999999999999998876543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=94.31  E-value=1.2  Score=42.53  Aligned_cols=114  Identities=15%  Similarity=0.246  Sum_probs=66.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +.|.|+ |.+|..+|..|+.+|. +|++.+++++.++...-++.+....             ...... +.. -+|.+++
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~-------------~~~~~~-I~~-t~d~~~l   64 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPI-------------LGSDTK-VTG-TNDYEDI   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhh-------------cCCCeE-EEE-cCCHHHh
Confidence            468898 8899999999998876 9999999987654333333321100             011111 111 0122211


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                                 ..-|++|.++|...  .+  ..+..   ..+.-|    +.+.+.+.+.|.+....+.++++|
T Consensus        65 -----------~dADiVIit~g~p~--~~--~~~r~---e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          65 -----------AGSDVVVITAGIPR--KP--GMSRD---DLLGTN----AKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             -----------CCCCEEEEecCCCC--Cc--CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence                       36799999999743  21  22222   222233    456677777777765566667765

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PLN02827 Alcohol dehydrogenase-like

Probab=94.31  E-value=0.32  Score=48.10  Aligned_cols=40  Identities=23%  Similarity=0.268  Sum_probs=33.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~   92 (388)
                      .|++++|.|+ +++|..+++.+...|++ |+++++++++.+.
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~  233 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEK  233 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            5899999986 89999999988889985 7777888776543

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.30  E-value=0.32  Score=47.00  Aligned_cols=35  Identities=20%  Similarity=0.330  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~   86 (388)
                      .|.+++|+|+++++|.++++.....|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            48999999999999999999999999999888765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.29  E-value=0.3  Score=48.35  Aligned_cols=42  Identities=26%  Similarity=0.287  Sum_probs=36.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|+|+++++|.++++.+...|++++++++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            578999999999999999998889999999899888776543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK14852 hypothetical protein; Provisional

Probab=94.24  E-value=0.24  Score=54.27  Aligned_cols=42  Identities=17%  Similarity=0.117  Sum_probs=35.0

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      ..+.+.+++..+|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus       323 g~e~Q~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D  365 (989)
T PRK14852        323 DYAGQRRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFD  365 (989)
T ss_pred             CHHHHHHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            344567888999999996 7999999999999996 78887764

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.19  E-value=0.1  Score=43.37  Aligned_cols=95  Identities=18%  Similarity=0.196  Sum_probs=55.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      -++-|.|+ |-.|.++++.|.+.|++|..+ +|+.+..+++...+......        ...+ .-.+...+-+-+.| +
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~--------~~~~-~~~~aDlv~iavpD-d   79 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAIL--------DLEE-ILRDADLVFIAVPD-D   79 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-------------TTG-GGCC-SEEEE-S-C-C
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccc--------cccc-ccccCCEEEEEech-H
Confidence            46888887 679999999999999998765 67776666655544221100        0000 11234445555666 4


Q ss_pred             HHHHHHHHHHhh--cCCccEEEEccccCC
Q 016493          133 DVQKLSNFAVNE--FGSIDIWINNAGTNK  159 (388)
Q Consensus       133 ~v~~~~~~i~~~--~g~iD~li~nAG~~~  159 (388)
                      .+..+++++.+.  ..+=.+++|+.|-..
T Consensus        80 aI~~va~~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   80 AIAEVAEQLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence            788888888765  333469999999754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.18  E-value=0.35  Score=48.11  Aligned_cols=41  Identities=27%  Similarity=0.289  Sum_probs=35.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .|.+++|+|+++++|.++++.+...|+++++++++.++.+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~  229 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEY  229 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            57899999999999999999988999999888887766543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.15  E-value=0.82  Score=43.52  Aligned_cols=47  Identities=21%  Similarity=0.308  Sum_probs=40.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL  101 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~  101 (388)
                      ++|.|.|+ |-+|..+|..|+..|++|++.+++++.+++..+++.+..
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~   52 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSL   52 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHH
Confidence            46778887 789999999999999999999999999988777766544

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.10  E-value=0.27  Score=47.77  Aligned_cols=40  Identities=23%  Similarity=0.326  Sum_probs=33.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~   92 (388)
                      .|++++|+|+ +++|..+++.+...|++ |+.+++++++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            5889999975 99999999998899997 6788888877653

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.02  E-value=0.098  Score=45.29  Aligned_cols=44  Identities=23%  Similarity=0.366  Sum_probs=34.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ..+++||+++|.|.|.-+|+-++..|.++|+.|.++..+.+.++
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~   74 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ   74 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc
Confidence            35799999999999999999999999999999999877655444

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.01  E-value=0.36  Score=47.38  Aligned_cols=41  Identities=12%  Similarity=0.194  Sum_probs=34.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|.|+ +++|..+++.....|+ +|+.+++++++.+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            5899999975 8999999998888998 799999988776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=94.00  E-value=0.36  Score=47.61  Aligned_cols=41  Identities=12%  Similarity=0.221  Sum_probs=35.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|.| .+++|.++++.+...|+ +|+.+++++++++.+
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            478999996 58999999999999998 799999988876544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PLN02928 oxidoreductase family protein

Probab=93.98  E-value=0.19  Score=49.27  Aligned_cols=39  Identities=23%  Similarity=0.241  Sum_probs=35.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ..+.||++.|.|- |.||+++|+.|...|++|+..+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            4689999999996 88999999999999999999998743

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=93.98  E-value=0.43  Score=45.49  Aligned_cols=31  Identities=29%  Similarity=0.518  Sum_probs=26.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      +|+|.|+ ||+|-++++.|+..|. ++.++|.+
T Consensus         1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D   32 (291)
T cd01488           1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMD   32 (291)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            3788885 7999999999999996 78888764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=93.96  E-value=0.26  Score=47.54  Aligned_cols=41  Identities=27%  Similarity=0.306  Sum_probs=35.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .+++++|.| ++++|.++++.+...|++|+.+++++++.+.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            578999999 79999999999999999999999988775543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.95  E-value=0.14  Score=48.66  Aligned_cols=42  Identities=19%  Similarity=0.338  Sum_probs=36.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      ..+++||+|+|.|+|+=.|+.++..|+++|++|.++.|....
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~  195 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQN  195 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchh
Confidence            468899999999987779999999999999999999885443

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.94  E-value=0.26  Score=46.58  Aligned_cols=42  Identities=26%  Similarity=0.340  Sum_probs=37.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|+|+++++|.++++.+.+.|++|+.+++++++.+.+
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  173 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL  173 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999988766543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.91  E-value=0.2  Score=53.02  Aligned_cols=74  Identities=16%  Similarity=0.211  Sum_probs=55.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .++++|.|. |-+|+.+++.|.++|.++++++.|+++.++..+                       ....++..|.++++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-----------------------~g~~v~~GDat~~~  455 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-----------------------FGMKVFYGDATRMD  455 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-----------------------cCCeEEEEeCCCHH
Confidence            467889987 569999999999999999999999987765422                       12456889999988


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccc
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      -.+++      ...+.|.+|.+..
T Consensus       456 ~L~~a------gi~~A~~vvv~~~  473 (621)
T PRK03562        456 LLESA------GAAKAEVLINAID  473 (621)
T ss_pred             HHHhc------CCCcCCEEEEEeC
Confidence            66542      1235777776653

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.79  E-value=0.46  Score=38.88  Aligned_cols=66  Identities=21%  Similarity=0.291  Sum_probs=44.6

Q ss_pred             hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHh
Q 016493           64 GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVN  143 (388)
Q Consensus        64 GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~  143 (388)
                      |||...++-+...|++|+++++++++++.+. ++                    +..   ...|.++.+    +.+++.+
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~--------------------Ga~---~~~~~~~~~----~~~~i~~   52 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL--------------------GAD---HVIDYSDDD----FVEQIRE   52 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT--------------------TES---EEEETTTSS----HHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh--------------------ccc---ccccccccc----ccccccc
Confidence            6899999999999999999999998865432 21                    211   224555444    3333333


Q ss_pred             hc--CCccEEEEcccc
Q 016493          144 EF--GSIDIWINNAGT  157 (388)
Q Consensus       144 ~~--g~iD~li~nAG~  157 (388)
                      ..  .++|++|.++|.
T Consensus        53 ~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen   53 LTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HTTTSSEEEEEESSSS
T ss_pred             ccccccceEEEEecCc
Confidence            33  369999999984

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=93.79  E-value=0.75  Score=44.11  Aligned_cols=112  Identities=16%  Similarity=0.179  Sum_probs=71.3

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           58 ITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        58 ITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |.|+ |.+|..+|..|+.+|.  ++++.++++++++..+.++.....-             ....+... .  .++++  
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~i~-~--~~~~~--   61 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASF-------------LPTPKKIR-S--GDYSD--   61 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcc-------------cCCCeEEe-c--CCHHH--
Confidence            3464 8899999999998883  6999999998888887777663211             11122222 1  23322  


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                               +...|++|..||...  .+  .++.   ...++.|.    .+++.+.+.+.+....+.++++|-
T Consensus        62 ---------~~daDivVitag~~r--k~--g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        62 ---------CKDADLVVITAGAPQ--KP--GETR---LELVGRNV----RIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             ---------HCCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEeCC
Confidence                     236899999999843  22  2332   23445443    455666666666656778888763

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>smart00829 PKS_ER Enoylreductase

Probab=93.78  E-value=0.28  Score=45.32  Aligned_cols=42  Identities=21%  Similarity=0.249  Sum_probs=37.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|.|+++++|..+++.....|++|+.+++++++.+.+
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  145 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL  145 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999988888999999999988876543

Enoylreductase in Polyketide synthases.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	388
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		5e-15
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-14
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-14
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-13
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		9e-13
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-12
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-12
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		4e-12
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-12
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-12
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-11
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-11
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-11
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-11
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-11
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-11
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-11
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		3e-11
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-11
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		8e-11
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		9e-11
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-10
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-10
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-10
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-10
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-10
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-10
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		3e-10
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		3e-10
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-10
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		4e-10
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-10
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		6e-10
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		7e-10
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		7e-10
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		9e-10
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-10
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-09
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-09
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-09
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		2e-09
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-09
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-09
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-09
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-09
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-09
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-09
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		6e-09
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		7e-09
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		7e-09
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		9e-09
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-08
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		1e-08
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-08
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-08
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-08
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-08
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		3e-08
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		5e-08
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		5e-08
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		6e-08
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		8e-08
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		8e-08
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		9e-08
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-07
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-07
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-07
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-07
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-07
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-07
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-07
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-07
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-07
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-07
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		3e-07
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		4e-07
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		4e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-07
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		4e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-07
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		5e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		6e-07
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-07
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		7e-07
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-07
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		7e-07
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		7e-07
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		8e-07
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		8e-07
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-06
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-06
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-06
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-06
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-06
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-06
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		4e-06
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		4e-06
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-06
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		5e-06
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		5e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-06
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		6e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-06
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		8e-06
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-05
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-05
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-05
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-05
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-05
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		4e-05
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		4e-05
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		5e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		5e-05
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		5e-05
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		6e-05
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		6e-05
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		6e-05
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		6e-05
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		7e-05
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-05
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		9e-05
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		9e-05
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		9e-05
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-04
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-04
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-04
3l6e_A	235	Crystal Structure Of Putative Short Chain Dehydroge		2e-04
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-04
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-04
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-04
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		4e-04

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 183
           +  DV +P  V+ L    V +FG +D+  NNAGT     P    T  + +Q+V TNL G 
Sbjct: 79  VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGP 138
Query: 184 ILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            LCT+EA RV + Q P+GG I N +G+ S  S  P +A Y +TK  +  L  S
Sbjct: 139 FLCTQEAFRVXKAQEPRGGRIIN-NGSISATSPRPYSAPYTATKHAITGLTKS 190

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGS+RGLGKA+A +    G+              ++    E  K    AAG    
Sbjct: 6   KTAIVTGSSRGLGKAIAWKL---GNMGANIVLNGSPASTSLDATAEEFK----AAG---- 54
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
            N+V AK      DV  P DV+ +   A++ FG IDI +NNAG  +    +L+ + ++ +
Sbjct: 55  INVVVAK-----GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRD-TLMLKMSEKDWD 108
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 232
            +++TNL  + LCT+   ++M  Q K G I N+   AG  G++    A Y ++K GL   
Sbjct: 109 DVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINITSIAGIIGNAG--QANYAASKAGLIGF 165
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             S+ KE     +  +  +PG++ TD+
Sbjct: 166 TKSIAKEFAAKGIYCNAVAPGIIKTDM 192

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 110 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 169
           G    N+V A    + CDV +P  V  L      EF  +D+ +NNAG+N    PL + T 
Sbjct: 78  GGRTGNIVRA----VVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTF 133
Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
           E+   IV+ NL G+ LCT+ A R  + Q P+GG I N +G+ S  +  P +A Y +TK  
Sbjct: 134 EQWNGIVAANLTGAFLCTQHAFRXXKAQTPRGGRIIN-NGSISAQTPRPNSAPYTATKHA 192
Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
           +  L  S   + +   +       G   TD     ST
Sbjct: 193 ITGLTKSTALDGRXHDIACGQIDIGNAATDXTARXST 229

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG  RG+G A+AR F  +GD             + +T       EG +A      
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGD------------KVAITYRSGEPPEGFLA------ 63
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     + CD+ +   V++         G +++ I NAG  K  + L++ + E+  
Sbjct: 64  ----------VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKD-QLLMRMSEEDFT 112
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            +V TNL G+    + A R M    KG  +      G  GS+    A Y ++K GL    
Sbjct: 113 SVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG--QANYAASKAGLVGFA 170
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            SL +E     +  +  +PG V TD+      + ++Q  NI+ ++P
Sbjct: 171 RSLARELGSRNITFNVVAPGFVDTDMT---KVLTDEQRANIVSQVP 213

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G+A+A +    G                V +  + L    +A         
Sbjct: 8   LVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA--------- 58
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                  +  DV    DV  +    V+ FG +DI +NNAG  K    L++   EE + ++
Sbjct: 59  -------VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWDTVI 110
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           +TNL G  LCT+   R M  Q + G I N+  +  G +  P  A Y + K G+  L  + 
Sbjct: 111 NTNLKGVFLCTKAVSRFMMRQ-RHGRIVNI-ASVVGVTGNPGQANYVAAKAGVIGLTKTS 168
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
            KE     + V+  +PG + TD+
Sbjct: 169 AKELASRNITVNAIAPGFIATDM 191

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG +RGLG  +A+    +G               +V     NL+E   AA   ++
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAG--------------CSVVVASRNLEEASEAAQKLTE 67
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           K  V        CDV    +V+KL      +FG +D  +N AG N+   P  +F  +E  
Sbjct: 68  KYGVE--TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR-HPAEEFPLDEFR 124
Query: 174 QIVSTNLVGSILCTREAMRVMR--DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
           Q++  NL G+    REA  ++R  D P    I N+        + P  + Y ++K G+  
Sbjct: 125 QVIEVNLFGTYYVCREAFSLLRESDNP---SIINIGSLTVEEVTMPNISAYAASKGGVAS 181
Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L  +L KE  R  + V+  +PG   T +
Sbjct: 182 LTKALAKEWGRYGIRVNVIAPGWYRTKM 209

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           ++ITG+ +G+G+A+A EF  +                T  +LE+   E   A G  +   
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE-CRAEGALTDT- 62
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   I  D+ + ADV++L+   V  +G ID  +NNAG  + F  L   T E+ +  
Sbjct: 63  --------ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYT 113
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++TNL G+   T+    +M  Q   GHIF +    +  +    +++Y  +K G R L  +
Sbjct: 114 MNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAFRH-SSIYCMSKFGQRGLVET 171
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           +   +++  V +    PG V T +
Sbjct: 172 MRLYARKCNVRITDVQPGAVYTPM 195

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGS RGLG A A     +G               +V  L             + K
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL-------------TRK 56
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
               H    G+A DV +   ++   +    E   +DI INNAG     KP+++   E  +
Sbjct: 57  GYDAH----GVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR-KPMVELELENWQ 111
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++ TNL  + L +R A + M  +  GG I N+ G+ +  ++ P  A Y + K G++ L 
Sbjct: 112 KVIDTNLTSAFLVSRSAAKRMIARNSGGKIINI-GSLTSQAARPTVAPYTAAKGGIKMLT 170
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 271
            S+  E  +  +  +   PG +LTD  ++ + I++KQ 
Sbjct: 171 CSMAAEWAQFNIQTNAIGPGYILTD--MNTALIEDKQF 206

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G+A+A      G              +  T   EN        G  +  + 
Sbjct: 9   LVTGASRGIGRAIAETLAARG------------AKVIGTATSEN--------GAQAISDY 48
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
           + A   G+  +V +PA ++ +      EFG +DI +NNAG  +    L++  +EE   I+
Sbjct: 49  LGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDII 107
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGLRQL 232
            TNL      ++  MR M  + + G I  +       G+GG +      Y + K GL   
Sbjct: 108 ETNLSSVFRLSKAVMRAMM-KKRHGRIITIGSVVGTMGNGGQAN-----YAAAKAGLIGF 161
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
             SL +E     + V+  +PG + TD+  +   + + Q   I+ ++P
Sbjct: 162 SKSLAREVASRGITVNVVAPGFIETDMTRA---LSDDQRAGILAQVP 205

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G A+A      G                     E +   + AAGG      
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAA-------EEVAGKIEAAGG------ 77
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              K      DV +PA V++L   A   FG +D+ +NNAG       + +  +   ++++
Sbjct: 78  ---KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXP-LTTIAETGDAVFDRVI 133
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + NL G+    REA + +R    GG I N       G   P   +Y + K G+      L
Sbjct: 134 AVNLKGTFNTLREAAQRLR---VGGRIINXS-TSQVGLLHPSYGIYAAAKAGVEAXTHVL 189
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL 278
            KE +   + V+  +PG   TDL L G + + +  F  +  L
Sbjct: 190 SKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPL 231

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           ++ITG++ G+G+ +ARE  ++G                 TE+ +        AGG++   
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD--------AGGTALAQ 58
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
           ++         DV +   V   +  AV+ +G ID+ +NNAG      PL     +E E++
Sbjct: 59  VL---------DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERM 108
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  N+ G +      + +M  Q + G I N+   G+  S  P  AVY +TK  +R +   
Sbjct: 109 IDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGA-LSVVPTAAVYCATKFAVRAISDG 166
Query: 236 LFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQNKQMFNIICELPETVARTL 286
           L +ES  + + V   +PG+V ++L   +    T+     +  I   P  +AR +
Sbjct: 167 LRQES--TNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAV 218

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G+A+A      G              +  T   EN        G  +  + 
Sbjct: 9   LVTGASRGIGRAIAETLAARG------------AKVIGTATSEN--------GAQAISDY 48
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
           + A   G+  +V +PA ++ +      EFG +DI +NNAG  +    L++  +EE   I+
Sbjct: 49  LGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDII 107
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGLRQL 232
            TNL      ++  MR M  + + G I  +       G+GG +      + + K GL   
Sbjct: 108 ETNLSSVFRLSKAVMRAMM-KKRHGRIITIGSVVGTMGNGGQAN-----FAAAKAGLIGF 161
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
             SL +E     + V+  +PG + TD+  +   + + Q   I+ ++P
Sbjct: 162 SKSLAREVASRGITVNVVAPGFIETDMTRA---LSDDQRAGILAQVP 205

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 54  RNVVITGSTRGLGKALAREFLLS--GDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGS 111
           + V+ITG++ G+GKA A E+L +  GD               + +LEE LK+ +      
Sbjct: 34  KTVLITGASAGIGKATALEYLEASNGDMKLILAARR------LEKLEE-LKKTI------ 80
Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
             +   +AKV     D+ +   ++        EF  IDI +NNAG   G   + Q   E+
Sbjct: 81  -DQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED 139
Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
           I+ +  TN+   I  T+  + + + +   G I N+ G+ +G  + P  ++Y ++K  +  
Sbjct: 140 IQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNL-GSIAGRDAYPTGSIYCASKFAVGA 197
Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLL---SGSTIQNKQMF 272
              SL KE   +K+ V   +PG+V T+  L    G+  Q K ++
Sbjct: 198 FTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVY 241

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 22/202 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +  +ITGS RG+G+A A  ++  G               T  E                 
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE----------------- 48
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              +      IA DV + A + +     ++ +GSIDI +NNA       P+++ T E  +
Sbjct: 49  ---IGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYD 104
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G++   +   R M    +GG I NM  + +G     L  VY +TK  +  L 
Sbjct: 105 RLFAINVSGTLFMMQAVARAMIAGGRGGKIINM-ASQAGRRGEALVGVYCATKAAVISLT 163
Query: 234 ASLFKESKRSKVGVHTASPGMV 255
            S      R  + V+  +PG+V
Sbjct: 164 QSAGLNLIRHGINVNAIAPGVV 185

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VVITG + GLG+A+A  F                    V     N +E +      +KK 
Sbjct: 18  VVITGGSTGLGRAMAVRF-------------GQEEAKVVINYYNNEEEAL-----DAKKE 59
Query: 116 LVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           +  A    I    DV +  DV  L   A+ EFG++D+ INNAG      P  + + +   
Sbjct: 60  VEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV-PSHELSLDNWN 118
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ + 
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMT 177
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L  E     + V+   PG + T +
Sbjct: 178 ETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VVITG + GLG+A+A  F                    V     N +E +      +KK 
Sbjct: 18  VVITGGSTGLGRAMAVRF-------------GQEEAKVVINYYNNEEEAL-----DAKKE 59
Query: 116 LVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           +  A    I    DV +  DV  L   A+ EFG++D+ INNAG      P  + + +   
Sbjct: 60  VEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV-PSHELSLDNWN 118
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ + 
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMT 177
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L  E     + V+   PG + T +
Sbjct: 178 ETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VVITG + GLG+A+A  F                    V     N +E +      +KK 
Sbjct: 18  VVITGGSTGLGRAMAVRF-------------GQEEAKVVINYYNNEEEAL-----DAKKE 59
Query: 116 LVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           +  A    I    DV +  DV  L   A+ EFG++D+ INNAG      P  + + +   
Sbjct: 60  VEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV-PSHELSLDNWN 118
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ + 
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMT 177
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L  E     + V+   PG + T +
Sbjct: 178 ETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VV+TG++RG+GKA+A     +G                V++  E      +  GG     
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG----- 58
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      DV + ADV+ +   A++ +G+ID+ +NNAG  +    L++    + +++
Sbjct: 59  -----------DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD-TLLIRMKKSQWDEV 106
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL G  LCT+ A ++M  + K G I N+     G       A Y + K G+     +
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKKRK-GRIINIASV-VGLIGNIGQANYAAAKAGVIGFSKT 164
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
             +E     + V+   PG + +D+
Sbjct: 165 AAREGASRNINVNVVCPGFIASDM 188

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           ++ ++TG++RG+G+++A +    G                  E  E + E + A G  S 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS-------KEKAEAVVEEIKAKGVDS- 62
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     I  +V +  +V+ +    V++FGS+D+ +NNAG  +    L++   +E +
Sbjct: 63  --------FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWD 113
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++ TNL G   C ++A   M  Q + G I N+     G    P  A Y +TK G+  L 
Sbjct: 114 DVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSV-VGAVGNPGQANYVATKAGVIGLT 171
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 275
            S  +E     + V+  +PG +++D+  + S    +QM   I
Sbjct: 172 KSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQI 213

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +  VITGST G+G A+AR    +G               TVT+           AG SS 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD---------EVAGLSSG 76
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
             L H        D  +P+++        + FG  DI +NNAG  +  + +  F  E+ +
Sbjct: 77  TVLHHP------ADXTKPSEIADXXAXVADRFGGADILVNNAGV-QFVEKIEDFPVEQWD 129
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +I++ NL  S    R A+   +   KG G I N+  A  G  ++P  + Y + K G+  L
Sbjct: 130 RIIAVNLSSSFHTIRGAIPPXKK--KGWGRIINIASA-HGLVASPFKSAYVAAKHGIXGL 186
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             ++  E   S V V++  PG VLT L+
Sbjct: 187 TKTVALEVAESGVTVNSICPGYVLTPLV 214

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 52  GPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGS 111
           G R  ++TGS+RGLG+A+A    ++G               TV E               
Sbjct: 25  GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEF-------------- 70
Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFA-VNEFG-SIDIWINNAGTNKGFKPLLQFTN 169
             +N+ H   A +A DV   +++  +  FA ++E G  +DI +NNAG  +  KP+++   
Sbjct: 71  --RNVGHDAEA-VAFDVTSESEI--IEAFARLDEQGIDVDILVNNAGI-QFRKPMIELET 124
Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
            + ++++ TNL  + +  REA + M   P+G G I N+ G+ +   +    A Y   K G
Sbjct: 125 ADWQRVIDTNLTSAFMIGREAAKRM--IPRGYGKIVNI-GSLTSELARATVAPYTVAKGG 181
Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           ++ L  ++  E  +  +  +   PG +LTD+
Sbjct: 182 IKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+T G G+ + R F+  G                + EL++ L + +  A       
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDNLYIA------- 51
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      DV   A ++++      E+ +IDI +NNAG   G +P  + + E+ E +
Sbjct: 52  ---------QLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM 102
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLRQLQ 233
           + TN  G +  TR  +  M ++   GHI N+   GS   S P     VYG+TK  +RQ  
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVER-NHGHIINI---GSTAGSWPYAGGNVYGATKAFVRQFS 158
Query: 234 ASLFKESKRSKVGVHTASPGMV----LTDLLLSGSTIQNKQMF-NIICELPETVARTL 286
            +L  +   + V V    PG+V     +++   G   + ++ + N +   PE V+  +
Sbjct: 159 LNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAV 216

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 185
            DV + ++V+ L    +  +G +D+ +NNAG  +    LL+   ++ + ++  NL G  L
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD-TLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 186 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV 245
           C+R A ++M  Q + G I N+     G    P  A Y + K G+  L  ++ KE     +
Sbjct: 144 CSRAAAKIMLKQ-RSGRIINIASV-VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 246 GVHTASPGMVLTDLLLSGSTIQNKQMFNII 275
            V+  +PG + TD+    S +  +++  +I
Sbjct: 202 TVNAVAPGFIATDMT---SELAAEKLLEVI 228

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG++ G+GK +A  +  +G              +   E+          AG    
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI----------AG---- 78
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              V  K   I CDV +P  V+ + +    E G IDI + NAG     + +L    EE +
Sbjct: 79  ---VGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVS-VQAMLDMPLEEFQ 134
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAVYGSTKCGLRQL 232
           +I  TN+ G  L  + A R M DQ  GG I           + P   + Y ++K  +  L
Sbjct: 135 RIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHL 194
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             ++  E    ++ V++ SPG + T+L+
Sbjct: 195 TKAMAVELAPHQIRVNSVSPGYIRTELV 222

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKV 112
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTKT 171
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G+A+A      G              +  T   EN        G  +  + 
Sbjct: 9   LVTGASRGIGRAIAETLAARG------------AKVIGTATSEN--------GAQAISDY 48
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
           + A   G+  +V +PA ++ +      EFG +DI +NNAG  +    L++  +EE   I+
Sbjct: 49  LGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDII 107
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL      ++  MR M  + + G I  + G           A Y + K GL     SL
Sbjct: 108 ETNLSSVFRLSKAVMRAMM-KKRHGRIITIGG----------QANYAAAKAGLIGFSKSL 156
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            +E     + V+  +PG + T          + Q   I+ ++P
Sbjct: 157 AREVASRGITVNVVAPGFIET---------SDDQRAGILAQVP 190

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKV 112
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTET 171
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                 G+A +V  P  ++ +     +EFG +DI +NNAG  +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIM 114
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKV 112
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTET 171
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                 G+A +V  P  ++ +     +EFG +DI +NNAG  +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIM 114
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGAIETDMT---KALNDEQRTATLAQVP 212

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSS-HEMSLSDWNKV 112
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTET 171
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TGS  G+G+A A      G                  E  E + + ++A GG++    
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVVVADIN--------AEAAEAVAKQIVADGGTAIS-- 62
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQ 174
                  +A DV +P   + +++  + EFG ID  +NNA    G K   LL    E  ++
Sbjct: 63  -------VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKK 115
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            +S NL G++ CTR   + M  +  GG I N     S  ++   +  YG  K G+  L  
Sbjct: 116 FMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQ----SSTAAWLYSNYYGLAKVGINGLTQ 170
Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LP 279
            L +E     + ++  +PG + T+   +  T   K+M + I + LP
Sbjct: 171 QLSRELGGRNIRINAIAPGPIDTE---ANRTTTPKEMVDDIVKGLP 213

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+  G+G+A+A++F L+               + V  LE+ L + +    G  K+ 
Sbjct: 10  VIVTGAGSGIGRAIAKKFALN-----------DSIVVAVELLEDRLNQIVQELRGMGKE- 57
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                V G+  DV +  DV++        +  ID+  NNAG   G  P+ + ++E  E++
Sbjct: 58  -----VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV 112
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++ NL  +   +R  + +M  Q KG  +     AG  G      A Y   K GL  L  S
Sbjct: 113 LAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA--GAPYTVAKHGLIGLTRS 170
Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGS 264
           +        +      PG V T++ L  S
Sbjct: 171 IAAHYGDQGIRAVAVLPGTVKTNIGLGSS 199

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 185
            DV    D Q++  +A  EFGS+D  +NNAG + G   L   + E   ++V  NL G  +
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF-LETESVERFRKVVEINLTGVFI 116
Query: 186 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV 245
             +  +  M+D   GG I N+  A +G     LT+ YG++K G+R L      E    ++
Sbjct: 117 GMKTVIPAMKDA-GGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 246 GVHTASPGMVLTDL 259
            V++  PGM  T +
Sbjct: 175 RVNSVHPGMTYTPM 188

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 185
            DV    D Q++  +A  EFGS+D  +NNAG + G   L   + E   ++V  NL G  +
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF-LETESVERFRKVVEINLTGVFI 116
Query: 186 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV 245
             +  +  M+D   GG I N+  A +G     LT+ YG++K G+R L      E    ++
Sbjct: 117 GMKTVIPAMKDA-GGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 246 GVHTASPGMVLTDL 259
            V++  PGM  T +
Sbjct: 175 RVNSVHPGMTYTPM 188

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNLVGSI 184
            DV + A +Q + + A+ EFG IDI ++N G +N+G   ++  T+++   I+ TNL+G+ 
Sbjct: 114 ADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG--EVVSLTDQQWSDILQTNLIGAW 171
Query: 185 LCTREAMRVMRDQPKGGH-IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 243
              R  +  M ++ +GG  IF     G  G+  P  + Y ++K G++ L  SL  E  R 
Sbjct: 172 HACRAVLPSMIERGQGGSVIFVSSTVGLRGA--PGQSHYAASKHGVQGLMLSLANEVGRH 229
Query: 244 KVGVHTASPGMVLTDLLLS 262
            + V++ +PG V T++ L+
Sbjct: 230 NIRVNSVNPGAVNTEMALN 248

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                 G+A +V  P  ++ +     +EFG +DI +NNAG  +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIM 114
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL      ++  +R M  + + G I N+ G+  G       A + + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANFAAAKAGVIGFTKSM 172
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TGSTRG+G+A+A +   +G                  E+                 N 
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI----------------ANK 54
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              K  G+  ++     + K      N    IDI +NNAG  +  K  L+ +  + E+++
Sbjct: 55  YGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRD-KLFLRMSLLDWEEVL 113
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQLQAS 235
             NL G+ L T+ ++R M  Q + G I N+    G  G+   +   Y +TK GL     S
Sbjct: 114 KVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVGFTGNVGQVN--YSTTKAGLIGFTKS 170
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L KE     V V+  +PG + TD+
Sbjct: 171 LAKELAPRNVLVNAVAPGFIETDM 194

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                 G+A +V  P  ++ +     +EFG +DI +NNA   +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRD-NLLMRMKEEEWSDIM 114
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 33/207 (15%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG  RG+G A+A+     G              + VT       +G+        
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHK------------VAVTHRGSGAPKGLF------- 56
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                    G+ CDV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 57  ---------GVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 105
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           E++++ NL G+    + A R M+    G  IF    +GS G      A Y ++K G+  +
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGN--QANYAASKAGVIGM 163
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             S+ +E  ++ V  +  +PG + TD+
Sbjct: 164 ARSIARELSKANVTANVVAPGYIDTDM 190

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R V+ITG   GLG+A A      G              +++ ++     EG+ A+  +  
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEG------------AKLSLVDVS---SEGLEASKAAVL 58
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           +    A+V     DV + A V+         FG ID + NNAG      P   FT  E +
Sbjct: 59  ETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFD 118
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++VS NL G  L   + +++MR+Q   G + N    G G       + Y + K G+  L 
Sbjct: 119 KVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVG-GIRGIGNQSGYAAAKHGVVGLT 176
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +   E  R  + ++  +PG + T ++
Sbjct: 177 RNSAVEYGRYGIRINAIAPGAIWTPMV 203

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                 G+A +V  P  ++ +     +EFG +DI +NNA   +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNADITRD-NLLMRMKEEEWSDIM 114
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R+VV+TG T+G+G+ +A  F  +G                V +L++              
Sbjct: 11  RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ-------------- 56
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
             L   KV G+  DV + A    L+  AV EFG ID+   NAG      PL   T E++ 
Sbjct: 57  --LGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD-APLATMTPEQLN 113
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----YGSTKCG 228
            I + N+ G+    +  +  +     G  +      G      P+T       YG+TK  
Sbjct: 114 GIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITG------PITGYPGWSHYGATKAA 167
Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 261
                 +   E    K+ V+   PG ++T+ LL
Sbjct: 168 QLGFMRTAAIELAPHKITVNAIMPGNIMTEGLL 200

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTV-TELEENLKEGMMAAGGSSKKN 115
           ++TG++RG+G+A+A E    G              M + T   E   EG+   G + K+ 
Sbjct: 32  IVTGASRGIGRAIALELARRG-------------AMVIGTATTEAGAEGI---GAAFKQA 75
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
            +  +  G   +V +   V  L    + EFG++++ +NNAG  +  +  ++  ++E + +
Sbjct: 76  GLEGR--GAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQD-QLAMRMKDDEWDAV 132
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + TNL      +R  +R M  + +GG I N+     G +  P    Y + K G+  +  +
Sbjct: 133 IDTNLKAVFRLSRAVLRPMM-KARGGRIVNITSV-VGSAGNPGQVNYAAAKAGVAGMTRA 190
Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L +E     + V+  +PG + TD+
Sbjct: 191 LAREIGSRGITVNCVAPGFIDTDM 214

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 120 KVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 178
           KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+   I+S 
Sbjct: 59  KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSI 117
Query: 179 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 238
           N   +   +  A   ++   +G  +F    + SG  + P  AVYG+TK  + QL   L  
Sbjct: 118 NFEAAYHLSVLAHPFLKASERGNVVF--ISSVSGALAVPYEAVYGATKGAMDQLTRCLAF 175
Query: 239 ESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 270
           E  +  + V+   PG++ T L+    TIQ+ +
Sbjct: 176 EWAKDNIRVNGVGPGVIATSLV--EMTIQDPE 205

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEE--NLKEGMMAAGGSSKK 114
           V+TG++RG+G A+AR+    G              +T  ++E+   ++  ++AAGG ++ 
Sbjct: 33  VVTGASRGIGAAIARKLGSLG----------ARVVLTARDVEKLRAVEREIVAAGGEAES 82
Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
           +         ACD+     +   +   +   G  D+ +NNAG      PL      E + 
Sbjct: 83  H---------ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDA 133
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           +++ NL    L  R     M    K GHI N+    +G +     A Y ++K GL  L  
Sbjct: 134 LIAVNLKAPYLLLRAFAPAMI-AAKRGHIINISSL-AGKNPVADGAAYTASKWGLNGLMT 191
Query: 235 SLFKESKRSKVGVHTASPGMVLTDL 259
           S  +E ++ +V V   +PG V T+ 
Sbjct: 192 SAAEELRQHQVRVSLVAPGSVRTEF 216

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 120 KVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 178
           KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+   I+S 
Sbjct: 58  KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSI 116
Query: 179 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 238
           N   +   +  A   ++   +G  +F    + SG  + P  AVYG+TK  + QL   L  
Sbjct: 117 NFEAAYHLSVLAHPFLKASERGNVVF--ISSVSGALAVPYEAVYGATKGAMDQLTRCLAF 174
Query: 239 ESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 270
           E  +  + V+   PG++ T L+    TIQ+ +
Sbjct: 175 EWAKDNIRVNGVGPGVIATSLV--EMTIQDPE 204

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 183
           I  D+ +  ++ KL + AV  FG +DI ++N+G    F  L   T EE +++ S N  G 
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQ 131
Query: 184 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 243
               REA R + +   GG I       S   S P  ++Y  +K  +        K+    
Sbjct: 132 FFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK 188
Query: 244 KVGVHTASPGMVLTDLL 260
           K+ V+  +PG  +TD+ 
Sbjct: 189 KITVNAVAPGGTVTDMF 205

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 114/303 (37%), Gaps = 34/303 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG   G+GKA+ +E L  G                  EL+ NL               
Sbjct: 22  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK----------- 70
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
             A+V  I C++    +V  L    ++ FG I+  +NN G  +   P    +++    ++
Sbjct: 71  -QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-GQFLSPAEHISSKGWHAVL 128
Query: 177 STNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            TNL G+  +C       M++   GG I N+      G   PL    G+ + G+  L  S
Sbjct: 129 ETNLTGTFYMCKAVYSSWMKEH--GGSIVNIIVPTKAG--FPLAVHSGAARAGVYNLTKS 184
Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKG 295
           L  E   S + ++  +PG++ +   +       +  F        +  +    RI V + 
Sbjct: 185 LALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE------GSFQKIPAKRIGVPEE 238
Query: 296 SGKAINYLTPPRILLALVTAWLRRGRWFD-DQGRALY--AAEADRIRNWAENRARFSFTD 352
               + +L  P        A    G+  D D GR+LY  + E     NW +     S   
Sbjct: 239 VSSVVCFLLSP-------AASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVK 291
Query: 353 AME 355
            M+
Sbjct: 292 KMK 294

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 19/203 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++T ST G+G A+AR     G               TV  L+    EG+           
Sbjct: 18  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ---GEGL----------- 63
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
               V G  C V +  D ++L   AVN  G +DI ++NA  N  F  ++  T E  ++I+
Sbjct: 64  ---SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+  ++L T+  +  M ++  GG +  +   G+     P    Y  +K  L  L  +L
Sbjct: 121 HVNVKATVLMTKAVVPEM-EKRGGGSVLIVSSVGA-YHPFPNLGPYNVSKTALLGLTKNL 178
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
             E     + V+  +PG++ T+ 
Sbjct: 179 AVELAPRNIRVNCLAPGLIKTNF 201

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 18/210 (8%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG +RG+G A+ R     G                  E  + +   +  +GG     
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQG-------WRVGVNYAANREAADAVVAAITESGG----- 76
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   I  DV   AD+    +    +FG +D  +NNAG     + + + + E IE+ 
Sbjct: 77  ----EAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERX 132
Query: 176 VSTNLVGSILCTREAMRVMRD--QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +  N+ GSILC  EA+R        +GG I N+    +   S      Y ++K  +    
Sbjct: 133 LRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFT 192
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
             L +E     + V+   PG++ TDL  SG
Sbjct: 193 IGLAREVAAEGIRVNAVRPGIIETDLHASG 222

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           ++ ++TG++RG+G+++A +    G                  E  E + E + A G  S 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEG-------YNVAVNYAGSKEKAEAVVEEIKAKGVDS- 56
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     I  +V +  +V+      V++FGS+D+ +NNAG  +    L +   +E +
Sbjct: 57  --------FAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRD-NLLXRXKEQEWD 107
Query: 174 QIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            ++ TNL G   C ++A  + +R   + G I N+     G    P  A Y +TK G+  L
Sbjct: 108 DVIDTNLKGVFNCIQKATPQXLR--QRSGAIINLSSV-VGAVGNPGQANYVATKAGVIGL 164
Query: 233 QASLFKESKRSKVGVHTASPGMVLTD 258
             S  +E     + V+  +PG +++D
Sbjct: 165 TKSAARELASRGITVNAVAPGFIVSD 190

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R+ +IT  T+GLGK +  + L  G               T+ E  ++++E          
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE---------- 57
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEI 172
                 ++  +  DV +  D+ K+   A++ FG ID  INNAG      K L+ +  +E 
Sbjct: 58  ------RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEW 111
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP---LTAVYGSTKCGL 229
            +++  NL       +  + VMR Q   G I N      G  S P     + + + K GL
Sbjct: 112 NEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINY--GFQGADSAPGWIYRSAFAAAKVGL 168
Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN 268
             L  ++  E     +  +   PG ++ +  +  +TIQ 
Sbjct: 169 VSLTKTVAYEEAEYGITANMVCPGDIIGE--MKEATIQE 205

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 40/231 (17%)
Query: 32  GIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXX 91
           G+ +GT    N+  +   +   + VVITG+++G+G  L R +                  
Sbjct: 10  GVDLGT---ENLYFQSXXRNQQKVVVITGASQGIGAGLVRAYR----------------- 49
Query: 92  MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW 151
                 + N +   + A   S K      +  +A D+ +P    ++    +  FG ID  
Sbjct: 50  ------DRNYR---VVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSL 100
Query: 152 INNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM----- 206
           +NNAG     KP ++ T E+ +  +  N+ G    T+ A      Q   GHI ++     
Sbjct: 101 VNNAGVFLA-KPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQ-GSGHIVSITTSLV 158
Query: 207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 257
           D    G  S    A+   TK GL  +  SL  E  RS V V+  SPG++ T
Sbjct: 159 DQPXVGXPS----ALASLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKT 205

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 183
           I  D+ +  ++ KL + AV  FG +DI ++N+G    F  L   T EE +++ S N  G 
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQ 131
Query: 184 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 243
               REA R + +   GG I       S   S P  +++  +K  +        K+    
Sbjct: 132 FFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDK 188
Query: 244 KVGVHTASPGMVLTDLL 260
           K+ V+  +PG  +TD+ 
Sbjct: 189 KITVNAVAPGGTVTDMF 205

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           + V++TG T+G+G A+  EF   G               T    E  L E +      SK
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFG-----------AVIHTCARNEYELNECL------SK 57
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 172
                 +V G  CD     + +KL     + F G +DI INN G  +  KP L +T E+ 
Sbjct: 58  WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDF 116
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
              +STNL  +   ++ A  +++    G  IF    AG    S  + ++Y +TK  L QL
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV--VSASVGSIYSATKGALNQL 174
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L  E     +  +  +P ++ T L
Sbjct: 175 ARNLACEWASDGIRANAVAPAVIATPL 201

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  V+TG   G+G A A EF   G              + ++++++   E   A  G   
Sbjct: 32  RAAVVTGGASGIGLATATEFARRG------------ARLVLSDVDQPALE--QAVNGLRG 77
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           +        G+ CDV    ++ +L++ A    G +D+  +NAG      PL Q  +++  
Sbjct: 78  QGF---DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWR 133
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHI-FNMDGAG---SGGSSTPLTAVYGSTKCGL 229
            ++  +L GSI      +  + +Q  GGHI F    AG   + G  T     YG  K G+
Sbjct: 134 WVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGT-----YGVAKYGV 188
Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
             L  +L +E K + +GV    P +V T L+ +   I+
Sbjct: 189 VGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR 226

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           VITG+T G+G A A+ F+  G              + +T   +++ +  +A         
Sbjct: 33  VITGATSGIGLAAAKRFVAEG------------ARVFITGRRKDVLDAAIAE-------- 72
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
           +     GI  D    A++ +L      E G ID+   NAG      PL + T E+ +   
Sbjct: 73  IGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXL-PLGEVTEEQYDDTF 131
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+ G +   ++A+ ++    +G  +  + G+ +G + TP  +VY ++K  LR    + 
Sbjct: 132 DRNVKGVLFTVQKALPLL---ARGSSVV-LTGSTAGSTGTPAFSVYAASKAALRSFARNW 187
Query: 237 FKESKRSKVGVHTASPGMVLTDLL--LSG-STIQNKQMFNIIC 276
             + K   + ++T SPG   T  L  L+G   +Q + + N + 
Sbjct: 188 ILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALA 230

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 26/223 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 13  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 58
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                 G A +V  P  ++ +     +EFG +DI +NNAG  +    L +   EE   I 
Sbjct: 59  ------GXALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLXRXKEEEWSDIX 111
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL  SI    +A+     + + G I N+ G+  G       A Y + K G+     S 
Sbjct: 112 ETNLT-SIFRLSKAVLRGXXKKRQGRIINV-GSVVGTXGNAGQANYAAAKAGVIGFTKSX 169
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            +E     V V+T +PG + TD       + ++Q    + ++P
Sbjct: 170 AREVASRGVTVNTVAPGFIETDXT---KALNDEQRTATLAQVP 209

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TGS+RG+GKA A     +G              +   E  E L               
Sbjct: 8   LVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--------------- 52
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              KV  +  +V +PA ++++       FG +D+++NNA +    +P+++      +  +
Sbjct: 53  -GVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTM 110
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + N    + C +EA ++M ++  GGHI ++   GS       T V G +K  L  L   L
Sbjct: 111 NINAKALLFCAQEAAKLM-EKNGGGHIVSISSLGSIRYLENYTTV-GVSKAALEALTRYL 168
Query: 237 FKESKRSKVGVHTASPGMVLTDLL 260
             E    ++ V+  S G + TD L
Sbjct: 169 AVELSPKQIIVNAVSGGAIDTDAL 192

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 19/203 (9%)
Query: 58  ITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLV 117
           +TGS+ G+G A+A  +  +G                  E  E+L+          K   V
Sbjct: 39  VTGSSGGIGWAVAEAYAQAG-----ADVAIWYNSHPADEKAEHLQ----------KTYGV 83
Query: 118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIV 176
           H+K     C++ +P  V++  +    +FG+ID+++ NAG      P +   N +   +I+
Sbjct: 84  HSKA--YKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKII 141
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           S +L G   C+    ++ +   KG  I     +G   +   L A Y + K     L  SL
Sbjct: 142 SVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSL 201
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
             E       V+T SPG + TD+
Sbjct: 202 AIEWAPF-ARVNTISPGYIDTDI 223

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG  RG+G A+A+     G              + VT       +G+        
Sbjct: 36  RSVLVTGGNRGIGLAIAQRLAADGH------------KVAVTHRGSGAPKGLF------- 76
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                    G+  DV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 77  ---------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 125
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           E++++ NL G+    + A R M+    G  IF    +G  G      A Y ++K G+  +
Sbjct: 126 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLWGIGN--QANYAASKAGVIGM 183
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             S+ +E  ++ V  +  +PG + TD+
Sbjct: 184 ARSIARELSKANVTANVVAPGYIDTDM 210

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG  RG+G A+A+     G              + VT       +G+        
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGH------------KVAVTHRGSGAPKGLF------- 56
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                    G+  DV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 57  ---------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 105
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           E++++ NL G+    + A R M+    G  IF   G+ SG       A Y ++K G+  +
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRNKFGRMIF--IGSVSGLWGIGNQANYAASKAGVIGM 163
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             S+ +E  ++ V  +  +PG + TD+
Sbjct: 164 ARSIARELSKANVTANVVAPGYIDTDM 190

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           ++ +ITGS RG+G+A A  ++  G               TV   + +++    AA     
Sbjct: 9   KSALITGSARGIGRAFAEAYVREG--------------ATVAIADIDIERARQAAA---- 50
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              +      +  DV     +       V   G +DI +NNA       P+++ T E  E
Sbjct: 51  --EIGPAAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYE 107
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G++   + A R    Q +GG I N   + +G     L A+Y +TK  +  L 
Sbjct: 108 KLFAINVAGTLFTLQAAARQXIAQGRGGKIINX-ASQAGRRGEALVAIYCATKAAVISLT 166
Query: 234 ASLFKESKRSKVGVHTASPGMV 255
            S   +  + ++ V+  +PG+V
Sbjct: 167 QSAGLDLIKHRINVNAIAPGVV 188

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 121 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 179
           V G  CD+    +  KL     + F G ++I +NNAG     K    FT ++   I+ TN
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTN 130
Query: 180 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 239
              +   ++ A  +++    G  IF    AG   S+ P  ++Y ++K  + Q+  SL  E
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF--SALPSVSLYSASKGAINQMTKSLACE 188
Query: 240 SKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFNIICELP 279
             +  + V++ +PG++LT L+   +  +  Q +++ N I + P
Sbjct: 189 WAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP 231

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 185
            D+ + A ++ L   A  EFG +DI +NNAG      P+ QF  E  ++I++ NL     
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFH 116
Query: 186 CTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSK 244
            TR A+  MR +   G I N+    G  GS+    A Y + K G+  L   +  E+  S 
Sbjct: 117 GTRLALPGMRAR-NWGRIINIASVHGLVGSTG--KAAYVAAKHGVVGLTKVVGLETATSN 173
Query: 245 VGVHTASPGMVLTDLL 260
           V  +   PG VLT L+
Sbjct: 174 VTCNAICPGWVLTPLV 189

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 18/210 (8%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG +RG+G A A   LL+                   E+   ++E    AGG     
Sbjct: 28  VLITGGSRGIGAASA---LLAARQGYAVAVNYASNSAAADEVVRQIRE----AGG----- 75
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV +  +V         + G +   +NNAG       +   T E +++ 
Sbjct: 76  ----QALAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRX 131
Query: 176 VSTNLVGSILCTREAMR--VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
              N+ GS LC REA++    R    GG I N+  A +   S      Y + K  +    
Sbjct: 132 FEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFT 191
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
             L KE     + V+   PG++ TD+  SG
Sbjct: 192 LGLAKEVATEGIRVNAVRPGIIETDIHASG 221

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ +G+GKA+A      G              + V+++     +   A+ G   
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADG------------ATVIVSDINAEGAKAAAASIGK-- 52
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   IA D+ +P  V+ L        G IDI +NNA       P + + + +++
Sbjct: 53  ------KARAIAADISDPGSVKALFAEIQALTGGIDILVNNA----SIVPFVAWDDVDLD 102
Query: 174 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
              +I+  NL G+ + TR     MR   K G + ++  + +  + TP  A Y + K G+ 
Sbjct: 103 HWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISI-ASNTFFAGTPNMAAYVAAKGGVI 161
Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTD 258
               +L  E  +  +  +  +PG++ +D
Sbjct: 162 GFTRALATELGKYNITANAVTPGLIESD 189

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R   +TG   G+G  L R+ L  G                +  LE         A GS  
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLE---------AEGSG- 58
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V G+  DV      +  ++     FG + I  NNAG N  F+P+ + + ++ +
Sbjct: 59  -----PEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWD 112
Query: 174 QIVSTNLVGSI-----LCTREAMRVMRDQPKGGHIFNMD------GAGSGGSSTPLTAVY 222
            ++  NL G +        R   RV   + KGGH+ N         AGS G       +Y
Sbjct: 113 WLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG-------IY 165
Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +TK  +R L  SL     + ++GV    PG+V + +  S
Sbjct: 166 NTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYAS 205

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 120 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 179
           +V  + CDV     V  L    V + G +D+ +NNAG   G  P++  T+EE +++++  
Sbjct: 74  RVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVT 132
Query: 180 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 239
           L   +  TR A+R  R    GG I N + +  G  +    + Y + K G+  L      E
Sbjct: 133 LTSVMRATRAALRYFRGVDHGGVIVN-NASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191
Query: 240 SKRSKVGVHTASPGMVLTDLL 260
           +    V ++  SP +     L
Sbjct: 192 AVEFGVRINAVSPSIARHKFL 212

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG+T GLG+A+AR     G                    EE LKE     G    
Sbjct: 11  RKALVTGATGGLGEAIARALHAQGAIVGLHGTR-----------EEKLKELAAELG---- 55
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                 ++     ++ +   V+ L   A  E G +DI +NNAG T  G    ++ ++E+ 
Sbjct: 56  -----ERIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGL--FVRMSDEDW 108
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + +++ NL      TRE    M  + + G I N+     G +  P  A Y ++K GL   
Sbjct: 109 DAVLTVNLTSVFNLTRELTHPMMRR-RNGRIINITSI-VGVTGNPGQANYCASKAGLIGF 166
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
             SL +E     V V+  +PG + + +      +  KQ   I+  +P
Sbjct: 167 SKSLAQEIASRNVTVNCIAPGFIESAMT---GKLNEKQKDAIMGNIP 210

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 28/204 (13%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG++RG+G+A AR     G                  ELE  L              
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALP------------- 54
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  DV E  D  +        FG +   +NNAG     KP+ + T EE   +
Sbjct: 55  --------LPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLV 105
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQ 233
           + TNL G+ L  R A+  +  +  GG I N+   GS     P    A Y ++K GL  L 
Sbjct: 106 LDTNLTGAFLGIRHAVPALLRR-GGGTIVNV---GSLAGKNPFKGGAAYNASKFGLLGLA 161
Query: 234 ASLFKESKRSKVGVHTASPGMVLT 257
            +   + + + V V    PG V T
Sbjct: 162 GAAMLDLREANVRVVNVLPGSVDT 185

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG+T GLG+A+AR     G                    EE LKE     G    
Sbjct: 8   RKALVTGATGGLGEAIARALHAQGAIVGLHGTR-----------EEKLKELAAELG---- 52
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                 ++     ++ +   V+ L   A  E G +DI +NNAG T  G    ++ ++E+ 
Sbjct: 53  -----ERIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGL--FVRMSDEDW 105
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + +++ NL      TRE    M  + + G I N+     G +  P  A Y ++K GL   
Sbjct: 106 DAVLTVNLTSVFNLTRELTHPMM-RRRNGRIINITSI-VGVTGNPGQANYCASKAGLIGF 163
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
             SL +E     V V+  +PG + + +      +  KQ   I+  +P
Sbjct: 164 SKSLAQEIASRNVTVNCIAPGFIESAMT---GKLNEKQKDAIMGNIP 207

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 102 KEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF 161
           +E +  A  S ++  V A+     CDV     V    +  V +FG ID   NNAG    F
Sbjct: 41  REALEKAEASVREKGVEAR--SYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF 98
Query: 162 KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV 221
            P+  + +++  ++++ N+ G+    +   R M  Q  G  +     AG  G   P  A 
Sbjct: 99  APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--PNMAA 156
Query: 222 YGSTKCGLRQLQASLFKESKRSKVGVHTASPG 253
           YG++K  +  L  +   +     + V+  SPG
Sbjct: 157 YGTSKGAIIALTETAALDLAPYNIRVNAISPG 188

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 26/243 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG++ G+G A+AR  +  G               TV  +EE   E         K
Sbjct: 33  RLALVTGASGGIGAAVARALVQQG-------LKVVGCARTVGNIEELAAE--------CK 77
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +    CD+    D+  + +   ++   +DI INNAG  +    LL  +    +
Sbjct: 78  SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWK 136
Query: 174 QIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLR 230
            + + N++   +CTREA + M+++    GHI N++   SG    PL  T  Y +TK  + 
Sbjct: 137 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSM-SGHRVLPLSVTHFYSATKYAVT 195
Query: 231 QLQASLFKESKRSKVGVHTA--SPGMVLTDLLLSGSTIQNKQMF----NIICELPETVAR 284
            L   L +E + ++  +     SPG+V T           ++       + C  PE VA 
Sbjct: 196 ALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAE 255
Query: 285 TLV 287
            ++
Sbjct: 256 AVI 258

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 57  VITGSTRGLGKALAR-------EFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAG 109
           +ITG++ G+G A+AR       + ++SG                    EE LK    + G
Sbjct: 18  LITGASSGIGSAIARLLHKLGSKVIISGSN------------------EEKLK----SLG 55
Query: 110 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 169
            + K N           +VC  A+ ++ SN  +++  ++DI + NAG        ++  +
Sbjct: 56  NALKDNYT--------IEVCNLANKEECSNL-ISKTSNLDILVCNAGITSDTLA-IRMKD 105
Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
           ++ ++++  NL  + +  REA++ M  Q + G I N+     G +  P  A Y ++K GL
Sbjct: 106 QDFDKVIDINLKANFILNREAIKKMI-QKRYGRIINISSI-VGIAGNPGQANYCASKAGL 163
Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
             +  SL  E     + V+  +PG + +D+      +  KQ   I+ ++P
Sbjct: 164 IGMTKSLSYEVATRGITVNAVAPGFIKSDMT---DKLNEKQREAIVQKIP 210

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 20/208 (9%)
Query: 53  PRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSS 112
           P+   +TG + G+G A+AR     G                V        +G+ AAG   
Sbjct: 24  PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV--------DGLRAAG--- 72
Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                   V G +CDV    +V      AV  FG I I +N+AG N G +      +   
Sbjct: 73  ------HDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE-TADLDDALW 125
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
             ++ TNL G    TRE +R    +  G G I N+   G G       A Y ++K G+  
Sbjct: 126 ADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTG-GKQGVMYAAPYTASKHGVVG 184
Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
              S+  E  ++ + V+   PG V T +
Sbjct: 185 FTKSVGFELAKTGITVNAVCPGYVETPM 212

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG++ G G A+A  FL  GD             ++   LEE  +    A      
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALD-------LSAETLEETARTHWHAYAD--- 52
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTN-EE 171
                 KV  +  DV +  DV       + +FG+ID+ +NNAG T      +L  T  E+
Sbjct: 53  ------KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQ 106
Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            +++++ N+ G  L  R  +  M  Q   G I N+    S   + P  + Y ++K  + Q
Sbjct: 107 FDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASVAS-LVAFPGRSAYTTSKGAVLQ 164
Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L  S+  +   S +  +   PGM+ T +
Sbjct: 165 LTKSVAVDYAGSGIRCNAVCPGMIETPM 192

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 10  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 50
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 51  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 109
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 110 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 168
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +L  E  R+ + V+   PG V T +  S
Sbjct: 169 KALGLELARTGITVNAVCPGFVETPMAAS 197

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 26  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 66
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 67  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 125
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 126 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 184
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +L  E  R+ + V+   PG V T +  S
Sbjct: 185 KALGLELARTGITVNAVCPGFVETPMAAS 213

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 125 AC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 182
           AC  DV +   +  + +  V  FG +D  + NAG       L+  T E+ +++++ NL G
Sbjct: 79  ACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRG 137
Query: 183 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 242
           + LCT+ A   M ++  GG I N+    +G  +   T  YG +K G+ QL      E + 
Sbjct: 138 AWLCTKHAAPRMIER-GGGAIVNLSSL-AGQVAVGGTGAYGMSKAGIIQLSRITAAELRS 195
Query: 243 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 291
           S +  +T  P  V T +       Q   M      L    AR+++ R++
Sbjct: 196 SGIRSNTLLPAFVDTPM-------QQTAMAMFDGALGAGGARSMIARLQ 237

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           VITGS+ G+G A+A  F   G              + V    + L E        S K  
Sbjct: 11  VITGSSSGIGLAIAEGFAKEG-----------AHIVLVARQVDRLHEA-----ARSLKEK 54
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              +V  +A DV  P  V  +     + FG  DI +NNAGT    + +++  +E+ +   
Sbjct: 55  FGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQFYW 113
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQA 234
             +++ ++   R  +  MR +  G  I N     S  +  PL    +Y  TK  L     
Sbjct: 114 ELHVMAAVRLARGLVPGMRARGGGAIIHN----ASICAVQPLWYEPIYNVTKAALMMFSK 169
Query: 235 SLFKESKRSKVGVHTASPGMVLT 257
           +L  E  +  + V+  +PG++LT
Sbjct: 170 TLATEVIKDNIRVNCINPGLILT 192

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK---EGMMAAGG 110
           R V++TG+  GLG+A A  F   G              + V +L  + K   +G +AA  
Sbjct: 31  RVVLVTGAGAGLGRAYALAFAERG------------ALVVVNDLGGDFKGVGKGSLAADK 78
Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
             ++       A    D  E    +K+   A++ FG ID+ +NNAG  +  +   + ++E
Sbjct: 79  VVEEIRRRGGKAVANYDSVEEG--EKVVKTALDAFGRIDVVVNNAGILRD-RSFARISDE 135
Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
           + + I   +L GS   TR A   M+ Q  G  I  M  + SG       A Y + K GL 
Sbjct: 136 DWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRII--MTSSASGIYGNFGQANYSAAKLGLL 193
Query: 231 QLQASLFKESKRSKVGVHTASP 252
            L  SL  E ++S +  +T +P
Sbjct: 194 GLANSLAIEGRKSNIHCNTIAP 215

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAV-YGSTKCGLRQL 232
           +V TNL G    T++ ++      +G G I N+  A +GG    + A  Y ++K G+   
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNI--ASTGGKQGLVHAAPYSASKHGVVGF 187
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLS 262
             +L  E  R+ + V+   PG V T +  S
Sbjct: 188 TKALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGWVETPMAAS 217

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 19/203 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+ +G+GKA+A   +  G                 +E+ +        AGG      
Sbjct: 6   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ--------AGG------ 51
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
            HA    +  DV +   V      A    G  D+ +NNAG      P+   T E ++++ 
Sbjct: 52  -HA--VAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS-TPIESITPEIVDKVY 107
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + N+ G I   + A+   + +  GG I N   + +G    P  AVY S+K  +R L  + 
Sbjct: 108 NINVKGVIWGIQAAVEAFKKEGHGGKIINA-CSQAGHVGNPELAVYSSSKFAVRGLTQTA 166
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
            ++     + V+   PG+V T +
Sbjct: 167 ARDLAPLGITVNGYCPGIVKTPM 189

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 43/262 (16%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+ +G+G+A A   LL G                V  ++ NL+ G+       ++  
Sbjct: 11  LVTGAAQGIGRAFAEALLLKG--------------AKVALVDWNLEAGVQCKAALHEQ-F 55
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              K   I CDV +   ++      V+ FG +DI +NNAG N           +  E+ +
Sbjct: 56  EPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTL 106
Query: 177 STNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-- 232
             NLV  I  T   +  M  Q   +GG I NM    +G        VY ++K G+     
Sbjct: 107 QINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL-AGLMPVAQQPVYCASKHGIVGFTR 165
Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 292
            A+L      S V ++   PG V T +L    +I+ ++      E  + +   +      
Sbjct: 166 SAALAANLMNSGVRLNAICPGFVNTAIL---ESIEKEENMGQYIEYKDHIKDMI------ 216
Query: 293 VKGSGKAINYLTPPRILLALVT 314
                K    L PP I   L+T
Sbjct: 217 -----KYYGILDPPLIANGLIT 233

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLD 129
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ +G+GKA+A      G              + V+++     +   A+ G   
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADG------------ATVIVSDINAEGAKAAAASIGK-- 52
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   IA D+ +P  V+ L        G IDI +NNA       P + + + +++
Sbjct: 53  ------KARAIAADISDPGSVKALFAEIQALTGGIDILVNNA----SIVPFVAWDDVDLD 102
Query: 174 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
              +I+  NL G+ + TR      R   K G + ++  + +  + TP  A Y + K G+ 
Sbjct: 103 HWRKIIDVNLTGTFIVTRAGTDQXRAAGKAGRVISI-ASNTFFAGTPNXAAYVAAKGGVI 161
Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTD 258
               +L  E  +  +  +  +PG++ +D
Sbjct: 162 GFTRALATELGKYNITANAVTPGLIESD 189

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVT----ELEENLKEGMMAAGGSS 112
           +ITGS+ G+G+A A  F   G              +T+T    E  E  ++ ++AAG S 
Sbjct: 10  IITGSSNGIGRATAVLFAREG------------AKVTITGRHAERLEETRQQILAAGVSE 57
Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
           +       V  +  DV   A   ++ +  + +FG +DI +NNAG           T + I
Sbjct: 58  QN------VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSI 111
Query: 173 EQIVST---NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
           E   +T   NL   I  T++A+  +      G I N+    SG  +TP    Y   K  +
Sbjct: 112 ESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPYYSIAKAAI 169
Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLT 257
            Q   +   +  +  + V++ SPG+V T
Sbjct: 170 DQYTRNTAIDLIQHGIRVNSISPGLVAT 197

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 26  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 66
Query: 117 VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 67  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLD 125
Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 126 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 184
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +L  E  R+ + V+   PG V T +  S
Sbjct: 185 KALGLELARTGITVNAVCPGFVETPMAAS 213

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+ RG+G+ +A+    S                 V E++        + G  S    
Sbjct: 48  LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK--------SFGYES---- 95
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                +G A DV +  ++ ++ N  + E  ++DI +NNAG  +     L+  N+E E ++
Sbjct: 96  -----SGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD-NLFLRMKNDEWEDVL 149
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
            TNL      T+   + M +  + G I N+     G +     A Y S+K G+     SL
Sbjct: 150 RTNLNSLFYITQPISKRMINN-RYGRIINISSI-VGLTGNVGQANYSSSKAGVIGFTKSL 207
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 279
            KE     + V+  +PG + +D+      I  +   NII  +P
Sbjct: 208 AKELASRNITVNAIAPGFISSDMT---DKISEQIKKNIISNIP 247

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 104 GMMAAGGSSKKN------LVHAKVAG-----IACDVCEPADVQKLSNFAVNEFGSIDIWI 152
           GM  A   S++N      L+H + AG      A DV +    ++ +   + +FG +D+ I
Sbjct: 49  GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLI 108
Query: 153 NNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 212
           NNAG  +     ++ T  + + ++ T+L      T++ +  M ++ + G I N+ G+ +G
Sbjct: 109 NNAGITRD-ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNI-GSVNG 165
Query: 213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
                  A Y S K G+     +L  E+ +  + V+T SPG + T ++
Sbjct: 166 SRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV 213

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++T ST G+G A+AR     G                V  L+    EG+           
Sbjct: 19  LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQ---GEGL----------- 64
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
               V G  C V +  D ++L   AV   G IDI ++NA  N  F  ++  T E  ++ +
Sbjct: 65  ---SVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 121
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+    L T+  +  M  + +GG    +  + +  S +P  + Y  +K  L  L  +L
Sbjct: 122 DINVKAPALMTKAVVPEM--EKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTL 179
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
             E     + V+  +PG++ T  
Sbjct: 180 AIELAPRNIRVNCLAPGLIKTSF 202

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           VITGS+ G+G A+A  F   G              + V    + L E        S K  
Sbjct: 11  VITGSSSGIGLAIAEGFAKEG-----------AHIVLVARQVDRLHEA-----ARSLKEK 54
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              +V  +A DV  P  V  +     + FG  DI +NNAGT    + +++  +E+ +   
Sbjct: 55  FGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQFYW 113
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQA 234
              ++ ++   R  +  MR +  G  I N     S  +  PL    +Y  TK  L     
Sbjct: 114 ELLVMAAVRLARGLVPGMRARGGGAIIHN----ASICAVQPLWYEPIYNVTKAALMMFSK 169
Query: 235 SLFKESKRSKVGVHTASPGMVLT 257
           +L  E  +  + V+  +PG++LT
Sbjct: 170 TLATEVIKDNIRVNCINPGLILT 192

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 19/206 (9%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           + ITG+T G G+A AR F  +G              + +T   E   + +  AG  S K 
Sbjct: 24  LFITGATSGFGEACARRFAEAG------------WSLVLTGRREERLQAL--AGELSAKT 69
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +V  +  DV + A      +    EF ++   INNAG   G  P      ++ +  
Sbjct: 70  ----RVLPLTLDVRDRAAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTX 125
Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           V TN+ G +  TR  +  +     G  I N+ G+ +G    P + VYG TK  + Q   +
Sbjct: 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNL-GSVAGKWPYPGSHVYGGTKAFVEQFSLN 184
Query: 236 LFKESKRSKVGVHTASPGMVLTDLLL 261
           L  + + + V V    PG+  ++  L
Sbjct: 185 LRCDLQGTGVRVTNLEPGLCESEFSL 210

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++ G+G A+A  +  +G              +   ++ + L +  MAA  ++  N 
Sbjct: 38  LVTGASYGIGFAIASAYAKAG------------ATIVFNDINQELVDRGMAAYKAAGIN- 84
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                 G  CDV +   +Q +     +E G IDI +NNAG  +   P+++ T  +  Q++
Sbjct: 85  ----AHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV-PMIEMTAAQFRQVI 139
Query: 177 STNLVGSILCTREAMRVMRDQPKGGH--IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
             +L    + ++  +  M    K GH  I N+    S      ++A Y + K GL+ L  
Sbjct: 140 DIDLNAPFIVSKAVIPSMI---KKGHGKIINICSMMSELGRETVSA-YAAAKGGLKMLTK 195
Query: 235 SLFKESKRSKVGVHTASPGMVLT 257
           ++  E   + +  +   PG + T
Sbjct: 196 NIASEYGEANIQCNGIGPGYIAT 218

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  +ITG++RG+G+A+A      G                V E        ++A  G+  
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGA-- 59
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
            NL+ A+ A              L + A    G +D  +NNAG  +    L++  +E+ E
Sbjct: 60  -NLLEAEAA------------TALVHQAAEVLGGLDTLVNNAGITRD-TLLVRMKDEDWE 105
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++  NL      TREA+++M  + + G I N+     G    P  A Y ++K GL    
Sbjct: 106 AVLEANLSAVFRTTREAVKLMM-KARFGRIVNITSV-VGILGNPGQANYVASKAGLIGFT 163
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            ++ KE  +  + V+  +PG + T++
Sbjct: 164 RAVAKEYAQRGITVNAVAPGFIETEM 189

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+ RG+G+ +A E    G              +      E+ +E + A     KKN 
Sbjct: 33  LVTGAGRGIGREMAMELGRRG----------CKVIVNYANSTESAEEVVAAI----KKN- 77
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
             +  A +  +V    D+ ++   AV  FG +DI  +N+G    F  +   T EE +++ 
Sbjct: 78  -GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVF 135
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + N  G     REA + +     GG +  M        + P  AVY  +K  +      +
Sbjct: 136 TINTRGQFFVAREAYKHLE---IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
             +    K+ V+  +PG + TD+
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDM 215

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG+ RG+G+ +A E    G                V     N  E       + KKN 
Sbjct: 33  LVTGAGRGIGREMAMELGRRG--------------CKVIVNYANSTESAEEVVAAIKKNG 78
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
             A        V E  D+ ++   AV  FG +DI  +N+G    F  +   T EE +++ 
Sbjct: 79  SDAACVKANVGVVE--DIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVF 135
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           + N  G     REA + +     GG +  M        + P  AVY  +K  +      +
Sbjct: 136 TINTRGQFFVAREAYKHLE---IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
             +    K+ V+  +PG + TD+
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDM 215

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNLVG 182
           +  DV +PA  +   + AV  FG + + +NNAG  N G   +  +   E ++I+  NL G
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTG 115
Query: 183 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 242
             L  R  ++ M++  + G I N+     G + T     Y +TK  +R L  S   E   
Sbjct: 116 VFLGIRAVVKPMKEAGR-GSIINISSI-EGLAGTVACHGYTATKFAVRGLTKSTALELGP 173
Query: 243 SKVGVHTASPGMVLTDL 259
           S + V++  PG+V T +
Sbjct: 174 SGIRVNSIHPGLVKTPM 190

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG  +G+G+ ++ +    G                + + EE   E +     + +K +
Sbjct: 6   MVTGGAQGIGRGISEKLAADG---------FDIAVADLPQQEEQAAETIKLIEAADQKAV 56
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                  +  DV + A+     + A  + G  D+ +NNAG  +  KPLL+ T E+++QI 
Sbjct: 57  F------VGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIY 109
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           S N+       + A R   +    G I N     +     P+ + Y +TK  +R L  + 
Sbjct: 110 SVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAI-QGFPILSAYSTTKFAVRGLTQAA 168
Query: 237 FKESKRSKVGVHTASPGMVLT 257
            +E       V+  +PG+V T
Sbjct: 169 AQELAPKGHTVNAYAPGIVGT 189

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 183
           I CDV +  DV+ L +  +  FG +D  +NNAG +   +   + + +   Q++  NL+G+
Sbjct: 59  ILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 118
Query: 184 ILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 240
              T+ A+  +R     G++ N+    GA     + P    Y +TK  +  +  +L  + 
Sbjct: 119 YTLTKLALPYLRK--SQGNVINISSLVGAIGQAQAVP----YVATKGAVTAMTKALALDE 172
Query: 241 KRSKVGVHTASPGMVLTDL 259
               V V+  SPG + T L
Sbjct: 173 SPYGVRVNCISPGNIWTPL 191

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R V++TG   G+GK +  +FL +GD                     ++ E   A     +
Sbjct: 3   RGVIVTGGGHGIGKQICLDFLEAGDKVCFI----------------DIDEKRSADFAKER 46
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEI 172
            NL +        DV +P  ++K   +A+ +   ID+ +NNA   +G K +L     EE 
Sbjct: 47  PNLFY-----FHGDVADPLTLKKFVEYAMEKLQRIDVLVNNAC--RGSKGILSSLLYEEF 99
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQ--PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
           + I+S  L        E  R+ RD+     G I N+  +     S P +  Y S K G+ 
Sbjct: 100 DYILSVGLKAPY----ELSRLCRDELIKNKGRIINI-ASTRAFQSEPDSEAYASAKGGIV 154
Query: 231 QLQASLFKESKRSKVGVHTASPGMV 255
            L  +L   S    V V+  +PG +
Sbjct: 155 ALTHAL-AMSLGPDVLVNCIAPGWI 178

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 19/223 (8%)
Query: 43  MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK 102
           M L ++     + +VI G  + LG   A+ F L                 T  +L++ L+
Sbjct: 1   MSLTKYHDLKNKVIVIAGGIKNLGALTAKTFALES-VNLVLHYHQAKDSDTANKLKDELE 59
Query: 103 EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 162
           +               AKVA    D+    +V KL +FA  EFG +DI IN  G     K
Sbjct: 60  DQG-------------AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLK-K 105
Query: 163 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 222
           P+++ +  E + + + N   +    ++A + M      GHI  +       + T   + Y
Sbjct: 106 PIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PNGHIITI-ATSLLAAYTGFYSTY 161
Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
              K  +     +  KE  + ++ V+  +PG + T       T
Sbjct: 162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET 204

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           VITG   G+G+A+A  F + G              +   E E  ++              
Sbjct: 11  VITGGANGIGRAIAERFAVEG------ADIAIADLVPAPEAEAAIRN------------- 51
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
           +  +V  + CDV +P DV+      ++ FG  DI +NNAG      P  + T E+ ++  
Sbjct: 52  LGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTF 110
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
             N+    L  +  +  M+ +   G I N+            T  Y STK        +L
Sbjct: 111 EINVDSGFLMAKAFVPGMK-RNGWGRIINLTSTTYWLKIEAYTH-YISTKAANIGFTRAL 168
Query: 237 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 288
             +  +  + V+  +P +V T    + +      MF+++  + + + R  VP
Sbjct: 169 ASDLGKDGITVNAIAPSLVRTATTEASAL---SAMFDVLPNMLQAIPRLQVP 217

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 34/230 (14%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG+T G+G+A+AR F   G                    E+ LKE    A    K
Sbjct: 28  RKALVTGATGGIGEAIARCFHAQGAIVGLHGTR-----------EDKLKE---IAADLGK 73
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
              V       + ++ +   +++L+  A  E   IDI +NNAG T  G    ++  +++ 
Sbjct: 74  DVFV------FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGL--FVRMQDQDW 125
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + +++ NL  +   TRE +  M  + + G I N+     G    P    Y + K GL   
Sbjct: 126 DDVLAVNLTAASTLTRELIHSMM-RRRYGRIINITSI-VGVVGNPGQTNYCAAKAGLIGF 183
Query: 233 QASLFKESKRSKVGVHTASPGMV---LTDLLLSGSTIQNKQMFNIICELP 279
             +L +E     + V+  +PG +   +TD L        KQ   I+  +P
Sbjct: 184 SKALAQEIASRNITVNCIAPGFIKSAMTDKL------NEKQKEAIMAMIP 227

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 30/247 (12%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R V++TG+  G+G+A A  F   G              + V ++   L +G  A+GGS+ 
Sbjct: 28  RVVIVTGAGGGIGRAHALAFAAEG------------ARVVVNDIGVGL-DGSPASGGSAA 74
Query: 114 KNLVHAKVAGIACDVCEPADVQK------LSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 167
           +++V    A     V + ++V        L   AV  FG +D+ +NNAG  +  + +   
Sbjct: 75  QSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANT 133
Query: 168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVY 222
           + EE + +++ +L G     R A    R   K      G I N   +G+G   +     Y
Sbjct: 134 SEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS-SGAGLQGSVGQGNY 192
Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGM--VLTDLLLSGSTIQNKQMFNIICELPE 280
            + K G+  L      E  R  V V+  +P     +T+ + +       Q F+ +   PE
Sbjct: 193 SAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAMA--PE 250
Query: 281 TVARTLV 287
            V+  +V
Sbjct: 251 NVSPLVV 257

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 16/231 (6%)
Query: 54  RNVVITGSTRGLGKALAREFLLSG-DXXXXXXXXXXXXXMTVTELE-ENLKEGMMAAGGS 111
           R   ITG+ RG G++ A      G D             +T      E+L E        
Sbjct: 16  RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ 75
Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
            +K L          DV + A +++L    + +FG +D+ + NAG    +  + + T+E+
Sbjct: 76  GRKALTRV------LDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQ 128
Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            + ++  NL G+    R  +  M +   GG I  +  + +G  +TP    Y ++K GL  
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVS-SSAGLKATPGNGHYSASKHGLTA 187
Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 282
           L  +L  E     + V++  P  V T +      I+ + M  I    P  V
Sbjct: 188 LTNTLAIELGEYGIRVNSIHPYSVETPM------IEPEAMMEIFARHPSFV 232

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG T+G+G+ +A  F  +G                  EL E      + AG    
Sbjct: 42  RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE------LGAG---- 91
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V G+  DV +P      +   V+ FG++D+   NAG     + L   T E++ 
Sbjct: 92  ------NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEAR-LDTMTPEQLS 144
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----YGSTKCG 228
           +++  N+ G++   +  +  +    +G  I      G      P+T       YG++K  
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITG------PVTGYPGWSHYGASKAA 198
Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 261
                 +   E     V V+   PG +LT+ L+
Sbjct: 199 QLGFMRTAAIELAPRGVTVNAILPGNILTEGLV 231

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 43  MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK 102
           MV +    AG + V++TG + G+G A+A +F   G                     E + 
Sbjct: 2   MVFQHDIYAG-QQVLVTGGSSGIGAAIAMQFAELG--------------------AEVVA 40
Query: 103 EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 162
            G+ A G  + +   H ++     D+ +   +Q+L          +D+ +NNAG ++  +
Sbjct: 41  LGLDADGVHAPR---HPRIRREELDITDSQRLQRL----FEALPRLDVLVNNAGISRDRE 93
Query: 163 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTA 220
              ++     E+++  NL  ++L ++ A  ++    +GG I N+    S  G +  P   
Sbjct: 94  ---EYDLATFERVLRLNLSAAMLASQLARPLLAQ--RGGSILNIASMYSTFGSADRP--- 145
Query: 221 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
            Y ++K  + QL  SL  E    ++ V+  +PG + T L
Sbjct: 146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPL 184

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R V++TG+  GLG+A A  F   G              + V +L  + K   +  G S+ 
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERG------------ALVVVNDLGGDFK--GVGKGSSAA 55
Query: 114 KNLVHA--KVAGIACDVCEPADV-QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
             +V    +  G A    +  +  +KL   A++ FG ID+ +NNAG  +  +   + ++E
Sbjct: 56  DKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDE 114
Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
           + + I   +L GS   TR A    + Q  G  I     +G  G+     A Y + K GL 
Sbjct: 115 DWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFG--QANYSAAKLGLL 172
Query: 231 QLQASLFKESKRSKVGVHTASP 252
            L  +L  E +++ +  +T +P
Sbjct: 173 GLANTLVIEGRKNNIHCNTIAP 194

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNLVG 182
           +  DV +PA  +   + AV  FG + + +NNAG  N G   +  +   E ++I+  NL G
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTG 115
Query: 183 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 242
             L  R  ++  ++  + G I N+     G + T     Y +TK  +R L  S   E   
Sbjct: 116 VFLGIRAVVKPXKEAGR-GSIINISSI-EGLAGTVACHGYTATKFAVRGLTKSTALELGP 173
Query: 243 SKVGVHTASPGMVLT 257
           S + V++  PG+V T
Sbjct: 174 SGIRVNSIHPGLVKT 188

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           +NV+ITG+++G+G  +A+     G               +  E+ + LK  +   G    
Sbjct: 30  KNVLITGASKGIGAEIAKTLASMG-------LKVWINYRSNAEVADALKNELEEKG---- 78
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K A I  D    +D  +     V   G +   +NNAG  +  K  ++   E+  
Sbjct: 79  -----YKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRD-KLAIKMKTEDFH 132
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGL 229
            ++  NL  + +  REA++VM  + + G + N+       G+ G +      Y ++K G+
Sbjct: 133 HVIDNNLTSAFIGCREALKVM-SKSRFGSVVNVASIIGERGNMGQTN-----YSASKGGM 186
Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
             +  S   E     +  ++ +PG + TD+
Sbjct: 187 IAMSKSFAYEGALRNIRFNSVTPGFIETDM 216

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           +ITG T G+G A+A +F+  G              + +T+   ++ E    + G+     
Sbjct: 10  IITGGTLGIGLAIATKFVEEG------------AKVMITDRHSDVGEKAAKSVGTPD--- 54
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
              ++     D  +     KL +     FG +   +NNAG     K + + T  E  +++
Sbjct: 55  ---QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLL 110
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL--QA 234
           + NL G    TR  ++ M+++  G  I NM     G    P    Y ++K  +R +   A
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI-EGFVGDPSLGAYNASKGAVRIMSKSA 169
Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
           +L    K   V V+T  PG + T L+
Sbjct: 170 ALDCALKDYDVRVNTVHPGYIKTPLV 195

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 144 EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 203
           E G ID+ +NNAG  +      + T E+ + ++ TNL      T++ +  M ++  G  I
Sbjct: 88  EVGEIDVLVNNAGITRDV-VFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG-RI 145
Query: 204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
            N+    +G         Y + K G+     SL +E     V V+T SPG + TD++   
Sbjct: 146 INISSV-NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV--- 201
Query: 264 STIQNKQMFNIICELP 279
             I+   +  I+  +P
Sbjct: 202 KAIRPDVLEKIVATIP 217

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 83/218 (38%), Gaps = 23/218 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSG-DXXXXXXXXXXXXXMTVTEL-EENLKEGMMAAGGS 111
           R  ++TG   G+G+A A  +   G D               V  L EE  ++ ++  G  
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG-- 107
Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                          D+ + +  + L + A    G +DI    AG       +   T+E+
Sbjct: 108 ---------------DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQ 152
Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            +Q  + N+      T+EA+ ++   PKG  I            +P    Y +TK  +  
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLL---PKGASIITTSSI-QAYQPSPHLLDYAATKAAILN 208
Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 269
               L K+     + V+  +PG + T L +SG   Q+K
Sbjct: 209 YSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDK 246

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK--EGMMAAGGSSK 113
           V+ITG+  GLGK  A+ F   G              + V + ++  K  + + AAGG + 
Sbjct: 325 VLITGAGAGLGKEYAKWFAKYG------------AKVVVNDFKDATKTVDEIKAAGGEAW 372
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
            +           DV +  D + +    ++++G+IDI +NNAG  +  +   + + +E +
Sbjct: 373 PD---------QHDVAK--DSEAIIKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWD 420
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            +   +L+G+   +R A     ++ + G I N+    SG       A Y S+K G+  L 
Sbjct: 421 SVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITST-SGIYGNFGQANYSSSKAGILGLS 478
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 273
            ++  E  ++ + V+  +P    T + LS    Q+K +++
Sbjct: 479 KTMAIEGAKNNIKVNIVAP-HAETAMTLSIMREQDKNLYH 517

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 22/204 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG ++G+G A+AR    +G                V  LE          GG + 
Sbjct: 13  RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---------GGFA- 62
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV + A V      A++  G  D+   NAG +   +P +  T+EE +
Sbjct: 63  ----------VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWD 111
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
                N  G  L  + A R        G I N   + +     PL A Y ++K  +    
Sbjct: 112 FNFDVNARGVFLANQIACRHFLASNTKGVIVNT-ASLAAKVGAPLLAHYSASKFAVFGWT 170
Query: 234 ASLFKESKRSKVGVHTASPGMVLT 257
            +L +E     + V+   PG V T
Sbjct: 171 QALAREMAPKNIRVNCVCPGFVKT 194

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 20/140 (14%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGM--MAAGGS 111
           + V+ITGS++G+G A AR F  +G              +   +   N+ E +  M A G 
Sbjct: 8   KRVLITGSSQGIGLATARLFARAG----------AKVGLHGRKAPANIDETIASMRADGG 57
Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                        AC        Q+L +  V +FG ID+ INNAG   G KPL +  +  
Sbjct: 58  DAAFFAADLATSEAC--------QQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTF 109
Query: 172 IEQIVSTNLVGSILCTREAM 191
            + ++  N+   ++ T+ A+
Sbjct: 110 YDAVMDANIRSVVMTTKFAL 129

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           ++TG++RG+G+A+A E    G                   L+ N  EG            
Sbjct: 31  LVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEG------------ 78
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 176
                AG+  DV     V           G   I +NNAG  +    L++  ++E   +V
Sbjct: 79  -----AGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRD-NLLVRMKDDEWFDVV 132
Query: 177 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 236
           +TNL      ++  +R M  + + G I N+ G+  G         Y + K GL     +L
Sbjct: 133 NTNLNSLYRLSKAVLRGM-TKARWGRIINI-GSVVGAMGNAGQTNYAAAKAGLEGFTRAL 190
Query: 237 FKESKRSKVGVHTASPGMVLTDL 259
            +E     + V+  +PG + TD+
Sbjct: 191 AREVGSRAITVNAVAPGFIDTDM 213

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVT----ELEENLKEGMMAAG 109
           + V+ITGS+ G+G+  A  F   G              +T+T    E  E  ++ ++ +G
Sbjct: 7   KTVIITGSSNGIGRTTAILFAQEG------------ANVTITGRSSERLEETRQIILKSG 54
Query: 110 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 169
            S K+      V  +  DV       ++ N  + +FG ID+ +NNAG           T+
Sbjct: 55  VSEKQ------VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTD 108
Query: 170 EEIE---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTK 226
           + I+   + +  NL   I  T++    +      G I N+    +G  + P    Y   K
Sbjct: 109 QGIDIYHKTLKLNLQAVIEMTKKVKPHLV--ASKGEIVNVSSIVAGPQAQPDFLYYAIAK 166
Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLT 257
             L Q   S   +  +  + V++ SPGMV T
Sbjct: 167 AALDQYTRSTAIDLAKFGIRVNSVSPGMVET 197

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEIEQIVS 177
           A+V  +  D+ + +  Q   +  V EFG ID  +NNAG     +   L    E  + IV 
Sbjct: 79  ARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138
Query: 178 TNLVGSILCTREAMR--VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            NL G++  T+  ++  +  D      I N+    S   ++P    Y  +K GL      
Sbjct: 139 VNLRGTVFFTQAVLKAXLASDARASRSIINITSV-SAVXTSPERLDYCXSKAGLAAFSQG 197
Query: 236 LFKESKRSKVGVHTASPGMVLTD 258
           L      + + V    PG++ +D
Sbjct: 198 LALRLAETGIAVFEVRPGIIRSD 220

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 178
           A+   I  D+ +P++V  L + AV+ FG +D  ++N+G    +   L+ T E  +++ + 
Sbjct: 71  AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNL 129
Query: 179 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 238
           N  G     ++ ++  R   +GG I       +  +  P  A+Y  +K  +     +   
Sbjct: 130 NTRGQFFVAQQGLKHCR---RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAV 186
Query: 239 ESKRSKVGVHTASPGMVLTDLL 260
           +     V V+  +PG V TD+ 
Sbjct: 187 DCGAKGVTVNCIAPGGVKTDMF 208

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 178
           AKV  +  DV +   V       V   G +DI +NNAG      P+      +  +++ T
Sbjct: 56  AKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDT 114
Query: 179 NLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 237
           NL+G +  TR A+  ++R +   G +  M    +G  +    AVY +TK G+     +L 
Sbjct: 115 NLLGLMYMTRAALPHLLRSK---GTVVQMSSI-AGRVNVRNAAVYQATKFGVNAFSETLR 170
Query: 238 KESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 273
           +E     V V    PG   T+L    +    K+M+ 
Sbjct: 171 QEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE 206

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 29/139 (20%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG++ G+G+A+A  F+  G                V +L              S  +
Sbjct: 18  VIVTGASMGIGRAIAERFVDEGS--------------KVIDL--------------SIHD 49
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
              AK   I CDV  P  V+   +    E+GSI + +NNAG  + +  +   +  E  +I
Sbjct: 50  PGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRI 108
Query: 176 VSTNLVGSILCTREAMRVM 194
           +  NL G    ++ A+  M
Sbjct: 109 IDVNLFGYYYASKFAIPYM 127

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 29/139 (20%)
Query: 56  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG++ G+G+A+A  F+  G                V +L              S  +
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGS--------------KVIDL--------------SIHD 42
Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
              AK   I CDV  P  V+   +    E+GSI + +NNAG  + +  +   +  E  +I
Sbjct: 43  PGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRI 101
Query: 176 VSTNLVGSILCTREAMRVM 194
           +  NL G    ++ A+  M
Sbjct: 102 IDVNLFGYYYASKFAIPYM 120

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 36/209 (17%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEEN-LKEGMMAAGGSS 112
           + V+ITG+  G+G+A    F   G              +   ++EE  L+E   A G   
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEG------------ARLVACDIEEGPLREAAEAVGAHP 53
Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFK---PLLQFT 168
                      +  DV +PA V++    A+   G +D  ++ AG T   F    PL    
Sbjct: 54  -----------VVXDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPL---- 98
Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
            E+ E ++  NL GS L  + A    R++  G  +        G       A Y ++  G
Sbjct: 99  -EDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRVYLGNLG---QANYAASXAG 154
Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLT 257
           +  L  +L  E  R  + V+T +PG + T
Sbjct: 155 VVGLTRTLALELGRWGIRVNTLAPGFIET 183

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVT-----ELEENLKEGMMAA 108
           ++V+ITGS+ G+G++ A  F   G              +T+T      LEE  K+ ++ A
Sbjct: 27  KSVIITGSSNGIGRSAAVIFAKEG------------AQVTITGRNEDRLEET-KQQILKA 73
Query: 109 GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 168
           G  ++K      +  +  DV E +    + N  + +FG IDI +NNAG N         T
Sbjct: 74  GVPAEK------INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGAN--LADGTANT 125
Query: 169 NEEIEQIVST---NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 225
           ++ +E    T   N    I  T++    +      G I N+    +G  +      Y   
Sbjct: 126 DQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYPYYACA 183
Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
           K  L Q       +  +  V V++ SPG V T  +
Sbjct: 184 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM 218

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG   G+G+A A  F  +G              + V ++ E+    +        
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNG------------AYVVVADVNEDAAVRVA------- 68
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
            N + +K  G+  DV    D +        ++G +D+ +NNAG       ++    E  +
Sbjct: 69  -NEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWD 126
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +I S N+ G  LC++  + V R +  GG I N     +  +    TA Y ++K  +  L 
Sbjct: 127 RIXSVNVKGIFLCSKYVIPVXR-RNGGGSIINTTSYTATSAIADRTA-YVASKGAISSLT 184
Query: 234 ASLFKESKRSKVGVHTASPGMV 255
            +   +  +  + V+  +PG +
Sbjct: 185 RAXAXDHAKEGIRVNAVAPGTI 206

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMT-VTELEENLKEGMMAAGGSS 112
           +   +TG +RG+G A+A+   L G                 V+E+E+        AGG  
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ--------AGG-- 81
Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +   I  D  +   +++     V   G +DI +N+AG      PL + T  + 
Sbjct: 82  -------RAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHS-APLEETTVADF 133
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +++ + N     +  R A R + D   GG I  +    +     P  ++Y ++K  L  L
Sbjct: 134 DEVXAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLYSASKAALAGL 190
Query: 233 QASLFKESKRSKVGVHTASPGMVLTD 258
              L ++     + V+   PG   TD
Sbjct: 191 TKGLARDLGPRGITVNIVHPGSTDTD 216

>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain DehydrogenaseREDUCTASE Family Oxidoreductase From Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 Length = 235

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 180
           V GI  D+    DV      AV   G  ++ ++ AGT + F P+  +T E+I ++  +NL
Sbjct: 51  VIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVXESNL 109
Query: 181 VGSILCTREAMRVMRDQPKGGHIFN-MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 239
           V +IL  ++ +R++ +  +GG + N +  A   G +    ++Y ++K G R    SL  E
Sbjct: 110 VSTILVAQQTVRLIGE--RGGVLANVLSSAAQVGKAN--ESLYCASKWGXRGFLESLRAE 165
Query: 240 SKRSKV 245
            K S +
Sbjct: 166 LKDSPL 171

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 120 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 179
           K  G+ C+V +    + +   A+++FG I + +NNAG   G KP       + E     N
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG-GGGPKP-FDMPMSDFEWAFKLN 119
Query: 180 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 239
           L      ++ A   M+ +  GG I N+    +G ++    A YGS+K  +  L  ++  +
Sbjct: 120 LFSLFRLSQLAAPHMQ-KAGGGAILNISSM-AGENTNVRMASYGSSKAAVNHLTRNIAFD 177
Query: 240 SKRSKVGVHTASPGMVLTDLL 260
                + V+  +PG + TD L
Sbjct: 178 VGPMGIRVNAIAPGAIKTDAL 198

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 57  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 116
           +ITG+  G+G   +R    +G              + + +L E    G   A  S  +  
Sbjct: 15  IITGACGGIGLETSRVLARAG------------ARVVLADLPETDLAG---AAASVGRGA 59
Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEIEQI 175
           VH  V     D+     V+ L +F ++ FG +DI  NNA  +     L+ Q T +  +  
Sbjct: 60  VHHVV-----DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDT 114
Query: 176 VSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
            + N  G++L  + A+ R++     GG I N+  A +  ++  ++  Y  TK  +  L  
Sbjct: 115 FTVNARGTMLMCKYAIPRLI--SAGGGAIVNISSA-TAHAAYDMSTAYACTKAAIETLTR 171
Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSG 263
            +  +  R  V  +  +PG+V T  L  G
Sbjct: 172 YVATQYGRHGVRCNAIAPGLVRTPRLEVG 200

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 26/209 (12%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           + V++TG  RG+G+A+A+ F   G              + + +L    KE   A GG   
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREG------------ALVALCDLRPEGKEVAEAIGG--- 51
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   A    D+ +  +  +    A    G +D+ +NNA         L     E  
Sbjct: 52  --------AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAI-AAPGSALTVRLPEWR 102
Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL   +  +  A R MR +  GG I N+     G  +    A Y ++K GL  L 
Sbjct: 103 RVLEVNLTAPMHLSALAAREMR-KVGGGAIVNVASV-QGLFAEQENAAYNASKGGLVNLT 160
Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            SL  +    ++ V+  +PG + T+ +L 
Sbjct: 161 RSLALDLAPLRIRVNAVAPGAIATEAVLE 189

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 34/214 (15%)
Query: 48  HCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMA 107
           H     +NV +TG+ +G+G A A  F+ +G                VT  ++   +    
Sbjct: 2   HMDFSGKNVWVTGAGKGIGYATALAFVEAG--------------AKVTGFDQAFTQ---- 43
Query: 108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 167
                         A    DV + A V ++    + E   +D  +N AG  +      Q 
Sbjct: 44  ---------EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQL 93
Query: 168 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGST 225
           + E+ +Q  + N+ G+    ++ M   R Q +GG I  +    S  + TP    + YG++
Sbjct: 94  SKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTV---ASDAAHTPRIGMSAYGAS 149
Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           K  L+ L  S+  E   S V  +  SPG   TD+
Sbjct: 150 KAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 24/204 (11%)
Query: 54  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG +RG+G+ +A+  L +G               T T L                
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS--------------- 74
Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEI 172
               +     I  D+   A  ++L+  A+ E  + +DI +NNAGT+ G   L  +     
Sbjct: 75  ---AYGDCQAIPADLSSEAGARRLAQ-ALGELSARLDILVNNAGTSWGAA-LESYPVSGW 129
Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKG---GHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
           E+++  N+     C ++ + ++R          + N+       +       YG +K  L
Sbjct: 130 EKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAAL 189
Query: 230 RQLQASLFKESKRSKVGVHTASPG 253
            QL   L KE     + V+  +PG
Sbjct: 190 HQLSRMLAKELVGEHINVNVIAPG 213

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 141 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 200
           A+   G +D+ +NNA      +P L+ T E  ++  S NL      ++   R M ++   
Sbjct: 70  ALGGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP 128
Query: 201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           G I N+        + P    Y STK  +  L  ++  E    K+ V++ +P +VLTD+
Sbjct: 129 GSIVNVSSM-VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 120 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 179
           +   I+ DV +   +  ++   +  +G +D+ +NNAG  +      + T  E+  +   +
Sbjct: 52  RAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQ-VGAFEETTERELRDLFELH 110
Query: 180 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 239
           + G    TR  +   R++   G + N+   G   S    +A Y +TK  L QL   L  E
Sbjct: 111 VFGPARLTRALLPQXRER-GSGSVVNISSFGGQLSFAGFSA-YSATKAALEQLSEGLADE 168
Query: 240 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 270
                + V    PG   T+L   G+   +++
Sbjct: 169 VAPFGIKVLIVEPGAFRTNLFGKGAAYFSEE 199

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	388
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-45
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-40
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-40
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-40
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-39
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-39
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-39
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-38
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-38
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-37
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-37
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-37
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-37
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	8e-37
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-36
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-36
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-36
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-36
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-36
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-36
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-36
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-36
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-36
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-36
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	7e-36
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-35
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-35
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-35
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-35
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-35
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	8e-35
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-34
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-34
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-34
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-34
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-34
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-34
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-34
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-34
1xq1_A	266	Putative tropinone reducatse; structural genomics,	5e-34
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-34
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	7e-34
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-34
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	8e-34
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-33
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-33
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-33
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-33
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-33
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-33
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-33
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-33
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	6e-33
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	6e-33
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-32
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-32
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-32
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-32
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-32
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-32
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-32
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-32
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-32
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-32
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	4e-32
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	4e-32
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	4e-32
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-32
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	5e-32
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-32
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-32
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	7e-32
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-32
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-31
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-31
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-31
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-31
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-31
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-31
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-31
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-31
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-31
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-31
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-31
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-31
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	5e-31
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	5e-31
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	6e-31
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-31
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	7e-31
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	7e-31
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	9e-31
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-30
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-30
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-30
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-30
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-30
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-30
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-30
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-30
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-30
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-30
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	5e-30
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-30
4e4y_A	244	Short chain dehydrogenase family protein; structur	8e-30
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	9e-30
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-29
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-29
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	3e-29
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-29
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-29
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-29
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	5e-29
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-28
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-28
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-28
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-28
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-28
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-28
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	5e-28
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	7e-28
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-27
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-27
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	8e-27
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	8e-27
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-26
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-26
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-26
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-26
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-25
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-25
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-25
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	5e-25
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	5e-25
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	8e-25
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-24
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-24
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-24
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-24
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-24
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-23
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-23
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-23
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-23
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-23
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-23
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-23
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-23
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	4e-23
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	8e-23
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	9e-23
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-22
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-22
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-22
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-22
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-22
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-22
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-22
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-22
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-22
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	8e-22
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-22
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-21
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-21
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-21
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-21
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	7e-21
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-20
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-20
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-18
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-20
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-20
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-20
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	5e-20
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-19
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-19
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-19
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-19
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-18
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-16
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-16
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-16
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	6e-15
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-07
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-06
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	8e-04

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  154 bits (392), Expect = 4e-45
 Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 29/234 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
            ++++TG+  GLG+AL    +  G +V +  R  + ++     L           G    
Sbjct: 4   GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----------GN--- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V GI  D+    DV      AV   G  ++ ++ AGT + F P+  +T E+I 
Sbjct: 50  ------AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIR 102

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++ +NLV +IL  ++ +R++ ++  GG + N+  + +        ++Y ++K G+R   
Sbjct: 103 RVMESNLVSTILVAQQTVRLIGER--GGVLANV-LSSAAQVGKANESLYCASKWGMRGFL 159

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
            SL  E K S + +    P  + ++   +   +            PE  A  ++
Sbjct: 160 ESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMT-----PEDAAAYML 208

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  143 bits (362), Expect = 1e-40
 Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG+++G+G  +A      G RVV+ +RS +++     E+  + K             
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHV----------- 58

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  D+ +             ++G++DI +N A         L    +   +I
Sbjct: 59  ---QEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAM--FMDGSLSEPVDNFRKI 113

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQ 233
           +  N++      +    +M+ Q K G+IFN+    S           +YGSTK  L  L 
Sbjct: 114 MEINVIAQYGILKTVTEIMKVQ-KNGYIFNV---ASRAAKYGFADGGIYGSTKFALLGLA 169

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQMFNIICELPETVARTLV 287
            SL++E     + V T  PG V TD+   +G+  ++++M       P+ +  T+ 
Sbjct: 170 ESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQ-----PDDLLNTIR 219

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  142 bits (360), Expect = 3e-40
 Identities = 51/234 (21%), Positives = 85/234 (36%), Gaps = 25/234 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V + G+   +G  +A++F   G  V    R+ E +   V E+E        AAGG     
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE--------AAGG----- 56

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               ++   + D     +V    N A +    +++ I N G N    P+L+ T+    ++
Sbjct: 57  ----RIVARSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANV-NFPILETTDRVFRKV 110

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
                    +  RE+ R+M      G IF   GA +        A + S K GLR +  S
Sbjct: 111 WEMACWAGFVSGRESARLMLAH-GQGKIFFT-GATASLRGGSGFAAFASAKFGLRAVAQS 168

Query: 236 LFKESKRSKVGV-HTASPGMVLTDLLLSGSTIQNKQMFNIICE---LPETVART 285
           + +E     + V H      V T  +         +      +    P  VA  
Sbjct: 169 MARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGA 222

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  142 bits (361), Expect = 4e-40
 Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 18/208 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG   G+G+ +A+     G  VV+  R  + +     E+            G   
Sbjct: 34  RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIG--------GRTG--- 82

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V  + CDV +P  V  L      EF  +D+ +NNAG+N    PL + T E+  
Sbjct: 83  -----NIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWN 137

Query: 174 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            IV+ NL G+ LCT+ A R+M+ Q P+GG I N  G+ S  +  P +A Y +TK  +  L
Sbjct: 138 GIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINN-GSISAQTPRPNSAPYTATKHAITGL 196

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             S   + +   +       G   TD+ 
Sbjct: 197 TKSTALDGRMHDIACGQIDIGNAATDMT 224

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  141 bits (357), Expect = 1e-39
 Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 22/208 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+  G+G+A+A     +G  V +A R  ++++ T  E+                
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---------------- 72

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV +P  V+ L    V +FG +D+  NNAGT     P+   T  + +
Sbjct: 73  ----GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWK 128

Query: 174 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           Q+V TNL G  LCT+EA RVM+ Q P+GG I N  G+ S  S  P +A Y +TK  +  L
Sbjct: 129 QVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINN-GSISATSPRPYSAPYTATKHAITGL 187

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             S   + +   +       G   T + 
Sbjct: 188 TKSTSLDGRVHDIACGQIDIGNADTPMA 215

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  140 bits (355), Expect = 2e-39
 Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++T ST G+G A+AR     G  VVV+SR  E+V  TV  L+          G    
Sbjct: 15  KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ--------GEGL--- 63

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V G  C V +  D ++L   AVN  G +DI ++NA  N  F  ++  T E  +
Sbjct: 64  ------SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWD 117

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 232
           +I+  N+  ++L T+  +  M  +  GG +  +           P    Y  +K  L  L
Sbjct: 118 KILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPF--PNLGPYNVSKTALLGL 174

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L  E     + V+  +PG++ T+ 
Sbjct: 175 TKNLAVELAPRNIRVNCLAPGLIKTNF 201

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  139 bits (353), Expect = 4e-39
 Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 21/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TG++RG+G A+AR+    G RVV+ +R  E +R    E+         AAGG   
Sbjct: 30  QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV--------AAGG--- 78

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +    ACD+     +   +   +   G  D+ +NNAG      PL      E +
Sbjct: 79  ------EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWD 132

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 232
            +++ NL    L  R     M    K GHI N+   AG         A Y ++K GL  L
Sbjct: 133 ALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKNPV--ADGAAYTASKWGLNGL 189

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             S  +E ++ +V V   +PG V T+ 
Sbjct: 190 MTSAAEELRQHQVRVSLVAPGSVRTEF 216

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  138 bits (351), Expect = 1e-38
 Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 16/207 (7%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG   G+GK +A   + +G  V++  R+ + +   V ELE     G         
Sbjct: 12  RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANG--------- 62

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +     D+    +  +  +      G +   ++ AG ++   P+ Q  +E   
Sbjct: 63  -----GAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWR 117

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           + V  N+ G++   + A R M     GG    +  + +  ++      YG TK  +  L 
Sbjct: 118 RTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGI-SSIAASNTHRWFGAYGVTKSAVDHLM 175

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
                E   S V V++  PG++ TDL+
Sbjct: 176 QLAADELGASWVRVNSIRPGLIRTDLV 202

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  137 bits (348), Expect = 5e-38
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 16/205 (7%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG   G+GKA+ +E L  G  VV+ASR  E ++    EL+ NL            
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP---TKQA--- 72

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  I C++    +V  L    ++ FG I+  +NN G      P    +++   
Sbjct: 73  ------RVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL-SPAEHISSKGWH 125

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++ TNL G+    +        +  GG I N+      G   PL    G+ + G+  L 
Sbjct: 126 AVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVPTKAGF--PLAVHSGAARAGVYNLT 182

Query: 234 ASLFKESKRSKVGVHTASPGMVLTD 258
            SL  E   S + ++  +PG++ + 
Sbjct: 183 KSLALEWACSGIRINCVAPGVIYSQ 207

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  134 bits (341), Expect = 2e-37
 Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 20/205 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VVI+G    LG  LAR     G  +V+A+R+ E +     ++           G      
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT--------DTGR----- 60

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  D+ + A V  L +  +  +G +D+ INNA      KP    T E +   
Sbjct: 61  ----RALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDA 116

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +   + G++   +     +      G + N+  +     S      Y   K  L  +  +
Sbjct: 117 IELTVFGALRLIQGFTPALE--ESKGAVVNV-NSMVVRHSQAKYGAYKMAKSALLAMSQT 173

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           L  E     + V++  PG +    L
Sbjct: 174 LATELGEKGIRVNSVLPGYIWGGTL 198

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  134 bits (339), Expect = 3e-37
 Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 34/240 (14%)

Query: 56  VVITGSTRGLGKALAREF-------LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAA 108
           ++ITG+ +G+G+A+A EF             +V++SR++  +     E          A 
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR--------AE 56

Query: 109 GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 168
           G              I  D+ + ADV++L+   V  +G ID  +NNAG  + F  L   T
Sbjct: 57  GA---------LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLT 106

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKC 227
            E+ +  ++TNL G+   T+    +M  Q   GHIF +   A +       +++Y  +K 
Sbjct: 107 EEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAF--RHSSIYCMSKF 163

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
           G R L  ++   +++  V +    PG V T +      + ++    ++  +PE +A  +V
Sbjct: 164 GQRGLVETMRLYARKCNVRITDVQPGAVYTPMW---GKVDDEMQALMM--MPEDIAAPVV 218

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  134 bits (339), Expect = 4e-37
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           ++ +ITGS RG+G+A A  ++  G  V +A    E  R    E+           G    
Sbjct: 9   KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----------GP--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV     +       V   G +DI +NNA       P+++ T E  E
Sbjct: 55  ------AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYE 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G++   + A R M  Q +GG I NM  + +G     L A+Y +TK  +  L 
Sbjct: 108 KLFAINVAGTLFTLQAAARQMIAQGRGGKIINM-ASQAGRRGEALVAIYCATKAAVISLT 166

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            S   +  + ++ V+  +PG+V  + 
Sbjct: 167 QSAGLDLIKHRINVNAIAPGVVDGEH 192

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  133 bits (337), Expect = 6e-37
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 23/204 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           +++TG +RG+GK++           VV   +           E  LK+     G      
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---------EAPLKKLKEKYGD----- 50

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  D+ E + +++L N AV   G ID  + NAG  +  + + +      +++
Sbjct: 51  ----RFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKL 106

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
              N    +     A+  ++     G++  +  + +          YGS+K  L     +
Sbjct: 107 YDINFFSIVSLVGIALPELKKT--NGNVVFV-SSDACNMYFSSWGAYGSSKAALNHFAMT 163

Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           L  E +  +V     +PG+V TD+
Sbjct: 164 LANEER--QVKAIAVAPGIVDTDM 185

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  133 bits (337), Expect = 8e-37
 Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 19/206 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ +G+GKA+A   +  G  V +A  +  + +   +E+          AGG   
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN--------QAGG--- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV +   V      A    G  D+ +NNAG      P+   T E ++
Sbjct: 52  ------HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVD 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G I   + A+   + +  GG I N   + +G    P  AVY S+K  +R L 
Sbjct: 105 KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA-CSQAGHVGNPELAVYSSSKFAVRGLT 163

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +  ++     + V+   PG+V T +
Sbjct: 164 QTAARDLAPLGITVNGYCPGIVKTPM 189

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  133 bits (336), Expect = 1e-36
 Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG + G+GK +A  F   G RVV+  R+ E +     E+E           G   
Sbjct: 7   KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIE--------QFPG--- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 ++  +  DV    D+QK+      +FG IDI INNA  N    P    +     
Sbjct: 56  ------QILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWN 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            +++  L G+  C++   +   ++   G+I NM  A     + P      + K G+  + 
Sbjct: 109 SVINIVLNGTFYCSQAIGKYWIEKGIKGNIINM-VATYAWDAGPGVIHSAAAKAGVLAMT 167

Query: 234 ASLFKE 239
            +L  E
Sbjct: 168 KTLAVE 173

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  133 bits (337), Expect = 1e-36
 Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 24/242 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG++ G+G A+AR  +  G +VV  +R+          +EE L     +AG    
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVG-------NIEE-LAAECKSAGYP-- 82

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +    CD+    D+  + +   ++   +DI INNAG  +    LL  +    +
Sbjct: 83  -----GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWK 136

Query: 174 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQ 231
            + + N++   +CTREA + M+++    GHI N++  +G       +T  Y +TK  +  
Sbjct: 137 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 196

Query: 232 LQASLFKESKRSKVGVHTA--SPGMVLTDLLLS---GSTIQNKQMFNIICEL-PETVART 285
           L   L +E + ++  +     SPG+V T            +    +  +  L PE VA  
Sbjct: 197 LTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEA 256

Query: 286 LV 287
           ++
Sbjct: 257 VI 258

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  133 bits (336), Expect = 1e-36
 Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 19/235 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  VITGS+ G+G A+A  F   G  +V+ +R  + +      L+E          G   
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE--------KFG--- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  +A DV  P  V  +     + FG  DI +NNAGT    + +++  +E+ +
Sbjct: 57  -----VRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQ 110

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
                 ++ ++   R  +  MR +  GG I +   +           +Y  TK  L    
Sbjct: 111 FYWELLVMAAVRLARGLVPGMRAR-GGGAIIHN-ASICAVQPLWYEPIYNVTKAALMMFS 168

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 288
            +L  E  +  + V+  +PG++LT   +  +    K          ++VA    P
Sbjct: 169 KTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP 223

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  133 bits (336), Expect = 1e-36
 Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 20/221 (9%)

Query: 40  GANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 99
           G++M +E+      R  ++TG  + +G A       +G RV++A          V +L  
Sbjct: 1   GSHMYMEKLRLDN-RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR- 58

Query: 100 NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 159
                    G           V+ +  DV     VQ        + G +DI +  AG   
Sbjct: 59  -------MEGH---------DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICI 102

Query: 160 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPL 218
                   T+ +  + V  NL G     +   R+M +Q K G I  +   +G   +    
Sbjct: 103 SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-KQGVIVAIGSMSGLIVNRPQQ 161

Query: 219 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
            A Y ++K G+ Q   SL  E     +  +  +P  + T L
Sbjct: 162 QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL 202

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  133 bits (337), Expect = 1e-36
 Identities = 46/234 (19%), Positives = 92/234 (39%), Gaps = 26/234 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+++G+G+ +A      G  VVV +RS E        L++ +    +  G      
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKE-------TLQK-VVSHCLELGA----- 77

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
              A    IA  + +    ++    A    G +D+ I N  TN     L       + + 
Sbjct: 78  ---ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKS 133

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  N +  ++ T  A+ +++     G I  +  + +G  + P+ A Y ++K  L    +S
Sbjct: 134 MEVNFLSYVVLTVAALPMLKQ--SNGSIVVV-SSLAGKVAYPMVAAYSASKFALDGFFSS 190

Query: 236 LFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
           + KE    R  V +     G++ T+  +   +              E  A  ++
Sbjct: 191 IRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQA----APKEECALEII 240

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  133 bits (336), Expect = 1e-36
 Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 18/206 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG+T+G+G  +AR F  +G R+V++ R    +      L E         G    
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE-------QFGT--- 70

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V  +A D+ EP    +L+  A   FG +D+ +NNAG +   +P++    +  +
Sbjct: 71  ------DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFD 123

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
             ++ NL    L      + M    +GG I  +  + +  +  P    Y ++K GL    
Sbjct: 124 ATIAVNLRAPALLASAVGKAMVAAGEGGAIITV-ASAAALAPLPDHYAYCTSKAGLVMAT 182

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
             L +E     +  ++  P +VLT++
Sbjct: 183 KVLARELGPHGIRANSVCPTVVLTEM 208

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  131 bits (333), Expect = 2e-36
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 22/209 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  VITG++RG+G+A+AR     G  + + +RS +        LE+ +   +M   G   
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVD-------RLEK-IAHELMQEQG--- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V     DV +   V++ S   +  FG +D+ + NAG    FK L + + EE  
Sbjct: 52  -----VEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFH 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL+G     +  +  ++    G  +             P    Y STK   R L 
Sbjct: 106 EMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDV--SARLIPYGGGYVSTKWAARALV 162

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            +   E+   +       PG V T    S
Sbjct: 163 RTFQIENPDVRFF--ELRPGAVDTYFGGS 189

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  132 bits (334), Expect = 3e-36
 Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG ++G+G A+  E    G RV   SR+ + +   +              G    
Sbjct: 22  TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR--------EKGL--- 70

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  V G  CD+    +  KL     + F G ++I +NNAG     K    FT ++ 
Sbjct: 71  ------NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDY 123

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
             I+ TN   +   ++ A  +++   + G++  +  + +G S+ P  ++Y ++K  + Q+
Sbjct: 124 NIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFL-SSIAGFSALPSVSLYSASKGAINQM 181

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             SL  E  +  + V++ +PG++LT L
Sbjct: 182 TKSLACEWAKDNIRVNSVAPGVILTPL 208

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  131 bits (333), Expect = 3e-36
 Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 22/237 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+   +G A A      G  + +   + E++      +           G      
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR--------EKGV----- 56

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +     CDV     V    +  V +FG ID   NNAG    F P+  + +++  ++
Sbjct: 57  ----EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV 112

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           ++ N+ G+    +   R M  Q   G I N    AG  G   P  A YG++K  +  L  
Sbjct: 113 LTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTE 169

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPETVARTLVPRI 290
           +   +     + V+  SPG +    +         ++ +      P+ VA+ ++  +
Sbjct: 170 TAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 226

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  131 bits (333), Expect = 3e-36
 Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 25/222 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV---ASRSSESVRMTVTELEENLKEGMMAAGG 110
           + +VI G  + LG   A+ F L    +V+    ++ S++      ELE          G 
Sbjct: 12  KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE--------DQGA 63

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
                    KVA    D+    +V KL +FA  EFG +DI IN  G     KP+++ +  
Sbjct: 64  ---------KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-KKPIVETSEA 113

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
           E + + + N   +    ++A + M      GHI  +       + T   + Y   K  + 
Sbjct: 114 EFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITI-ATSLLAAYTGFYSTYAGNKAPVE 169

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 272
               +  KE  + ++ V+  +PG + T       T ++    
Sbjct: 170 HYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFH 211

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  131 bits (331), Expect = 7e-36
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG +RG+G  +  E    G  V   SR+ + +   +T+          + G    
Sbjct: 10  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR--------SKGF--- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 172
                 KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+ 
Sbjct: 59  ------KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDY 111

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 230
             I+S N   +   +  A   ++   + G++  +    S  G  + P  AVYG+TK  + 
Sbjct: 112 SLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFI---SSVSGALAVPYEAVYGATKGAMD 167

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
           QL   L  E  +  + V+   PG++ T L
Sbjct: 168 QLTRCLAFEWAKDNIRVNGVGPGVIATSL 196

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  130 bits (330), Expect = 1e-35
 Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 23/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG++ G+GK +A  +  +G +V VA+R S+++++   E+           GG   
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA--------GVGG--- 81

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   I CDV +P  V+ + +    E G IDI + NAG     + +L    EE +
Sbjct: 82  ------KALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV-QAMLDMPLEEFQ 134

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFN---MDGAGSGGSSTPLTAVYGSTKCGLR 230
           +I  TN+ G  L  + A R M DQ  GG I     M  +G   +     + Y ++K  + 
Sbjct: 135 RIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM--SGHIINIPQQVSHYCTSKAAVV 192

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
            L  ++  E    ++ V++ SPG + T+L
Sbjct: 193 HLTKAMAVELAPHQIRVNSVSPGYIRTEL 221

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  131 bits (331), Expect = 2e-35
 Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 18/206 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +   ITG   GLGK +       G + V+ASR  + ++ T  ++         +  G   
Sbjct: 27  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS--------SQTG--- 75

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV  I CDV +P  VQ   +  +   G  +I INNA  N    P  + +    +
Sbjct: 76  -----NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWK 129

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            I    L G+   T E  + +    KG    ++       + +       S K G+  + 
Sbjct: 130 TITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSI-TTIYAETGSGFVVPSASAKAGVEAMS 188

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            SL  E  +  +  +   PG + T  
Sbjct: 189 KSLAAEWGKYGMRFNVIQPGPIKTKG 214

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  129 bits (328), Expect = 2e-35
 Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 112
           +  ++TGS+RG+GKA A     +G  +V+  +RS ++   T  E+E          G   
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE--------KLGV-- 54

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  KV  +  +V +PA ++++       FG +D+++NNA +    +P+++      
Sbjct: 55  -------KVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHW 106

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +  ++ N    + C +EA ++M     GGHI ++  +             G +K  L  L
Sbjct: 107 DWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSI-SSLGSIRYLENYTTVGVSKAALEAL 164

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
              L  E    ++ V+  S G + TD 
Sbjct: 165 TRYLAVELSPKQIIVNAVSGGAIDTDA 191

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  129 bits (327), Expect = 2e-35
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSS 112
           + VVITGS+ GLGK++A  F     +VVV  RS  +     + E++          GG  
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK--------KVGG-- 57

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  + 
Sbjct: 58  -------EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDW 109

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            +++ TNL G+ L +REA++   +    G + NM  +       PL   Y ++K G++ +
Sbjct: 110 NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINM-SSVHEKIPWPLFVHYAASKGGMKLM 168

Query: 233 QASLFKESKRSKVGVHTASPGMVLTD 258
             +L  E     + V+   PG + T 
Sbjct: 169 TETLALEYAPKGIRVNNIGPGAINTP 194

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  130 bits (329), Expect = 2e-35
 Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 19/207 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  V+TG   G+G A A EF   G R+V++     ++   V  L           G    
Sbjct: 32  RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR--------GQGF--- 80

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                    G+ CDV    ++ +L++ A    G +D+  +NAG      PL Q  +++  
Sbjct: 81  ------DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWR 133

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++  +L GSI      +  + +Q  GGHI        G         YG  K G+  L 
Sbjct: 134 WVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFA-GLVPNAGLGTYGVAKYGVVGLA 192

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L +E K + +GV    P +V T L+
Sbjct: 193 ETLAREVKPNGIGVSVLCPMVVETKLV 219

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  128 bits (325), Expect = 4e-35
 Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 29/239 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + ++ITG++ G+G+ +ARE  ++G ++++ +R           +E  +   +  AGG   
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQA-------RIEA-IATEIRDAGG--- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                        DV +   V   +  AV+ +G ID+ +NNAG      PL     +E E
Sbjct: 54  ------TALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV-MPLSPLAAVKVDEWE 106

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
           +++  N+ G +      + +M  Q + G I N+   GS    S  P  AVY +TK  +R 
Sbjct: 107 RMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINI---GSIGALSVVPTAAVYCATKFAVRA 162

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLS---GSTIQNKQMFNIICELPETVARTLV 287
           +   L +ES   +V     +PG+V ++L  +     T+     +  I   P  +AR + 
Sbjct: 163 ISDGLRQESTNIRVT--CVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVR 219

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  128 bits (324), Expect = 8e-35
 Identities = 51/239 (21%), Positives = 84/239 (35%), Gaps = 29/239 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG+  G+G+  A EF     ++V+   +   +  T  + +                 
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--------------- 78

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
              AKV     D     D+   +     E G + I +NNAG       L    + +IE+ 
Sbjct: 79  --GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT-SDLFATQDPQIEKT 135

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
              N++     T+  +  M      GHI  +  + +G  S P    Y S+K        +
Sbjct: 136 FEVNVLAHFWTTKAFLPAMTKN-NHGHIVTV-ASAAGHVSVPFLLAYCSSKFAAVGFHKT 193

Query: 236 LFKE---SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 291
           L  E    + + V      P  V T  + + ST     +       PE V   L+  I 
Sbjct: 194 LTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL------EPEEVVNRLMHGIL 246

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  128 bits (323), Expect = 1e-34
 Identities = 39/235 (16%), Positives = 77/235 (32%), Gaps = 18/235 (7%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              V+TG + G+G A     L +G  V   +R  E +R   + L +         G    
Sbjct: 9   AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR------FPGA--- 59

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 ++    CDV +   V+  +       G   I +NNAG  +      + T+E   
Sbjct: 60  ------RLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWS 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           + +       I   R  +  +  +     I  +  +       P      + + G++ L 
Sbjct: 113 EELQLKFFSVIHPVRAFLPQLESR-ADAAIVCV-NSLLASQPEPHMVATSAARAGVKNLV 170

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 288
            S+  E     V V+    G+V +         + ++  +      +      +P
Sbjct: 171 RSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP 225

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  128 bits (324), Expect = 1e-34
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 19/208 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITGS+ G+G+A A  F   G +V +  R +E +  T  ++         AAG S +  
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL--------AAGVSEQN- 59

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEI 172
                V  +  DV   A   ++ +  + +FG +DI +NNAG        K     + E  
Sbjct: 60  -----VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESY 114

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +  ++ NL   I  T++A+  +      G I N+    SG  +TP    Y   K  + Q 
Sbjct: 115 DATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPYYSIAKAAIDQY 172

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             +   +  +  + V++ SPG+V T   
Sbjct: 173 TRNTAIDLIQHGIRVNSISPGLVATGFG 200

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  127 bits (322), Expect = 1e-34
 Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG+  G+GK +A  F  +G  VVV+  ++++    V E++          GG   
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ--------QLGG--- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +     CD+    ++  L++FA+++ G +DI +NNAG              +  
Sbjct: 61  ------QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFR 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +    N+      ++     M     GG I  +  + +  +       Y S+K     L 
Sbjct: 113 RAYELNVFSFFHLSQLVAPEMEKN-GGGVILTI-TSMAAENKNINMTSYASSKAAASHLV 170

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 272
            ++  +     + V+  +PG +LTD L S  T + +Q  
Sbjct: 171 RNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM 209

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  128 bits (323), Expect = 1e-34
 Identities = 50/205 (24%), Positives = 76/205 (37%), Gaps = 19/205 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +   ITG   G+G  +A  F+  G   V+ASRS   V     +L         A G    
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG-------ATGR--- 77

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   ++ DV  P  V    + A+ EFG IDI IN A  N    P    +    +
Sbjct: 78  ------RCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFK 130

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++  +  G+   +R           GG I N+  A  G     L    GS K  +  + 
Sbjct: 131 TVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNI-TATLGNRGQALQVHAGSAKAAVDAMT 188

Query: 234 ASLFKESKRSKVGVHTASPGMVLTD 258
             L  E     + V++ +PG +   
Sbjct: 189 RHLAVEWGPQNIRVNSLAPGPISGT 213

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  127 bits (321), Expect = 1e-34
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVA--SRSSESVRMTVTELEENLKEGMMAAGGS 111
           +  ++TG  +G+G+ ++ +    G  + VA   +  E    T+  +E        AA   
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE--------AADQ- 53

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                   K   +  DV + A+     + A  + G  D+ +NNAG  +  KPLL+ T E+
Sbjct: 54  --------KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEED 104

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
           ++QI S N+       + A R   +    G I N   + +     P+ + Y +TK  +R 
Sbjct: 105 LKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINA-ASIAAIQGFPILSAYSTTKFAVRG 163

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L  +  +E       V+  +PG+V T +
Sbjct: 164 LTQAAAQELAPKGHTVNAYAPGIVGTGM 191

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  126 bits (319), Expect = 3e-34
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+  G+G+A+A++F L+   VV      + +   V EL           G      
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR--------GMGK----- 56

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +V G+  DV +  DV++        +  ID+  NNAG   G  P+ + ++E  E++
Sbjct: 57  ----EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV 112

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++ NL  +   +R  + +M  Q   G I N   + +G       A Y   K GL  L  S
Sbjct: 113 LAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNT-ASIAGIRGGFAGAPYTVAKHGLIGLTRS 170

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           +        +      PG V T++ 
Sbjct: 171 IAAHYGDQGIRAVAVLPGTVKTNIG 195

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  126 bits (319), Expect = 4e-34
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 24/207 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG ++G+G A+AR    +G  V +A     + +  V  LE               
Sbjct: 13  RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--------------- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV + A V      A++  G  D+   NAG +   +P +  T+EE +
Sbjct: 58  -----NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWD 111

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 232
                N  G  L  + A R        G I N    A   G+  PL A Y ++K  +   
Sbjct: 112 FNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA--PLLAHYSASKFAVFGW 169

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L +E     + V+   PG V T +
Sbjct: 170 TQALAREMAPKNIRVNCVCPGFVKTAM 196

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  126 bits (319), Expect = 4e-34
 Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 25/205 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            VITG+T G+G A A+ F+  G RV +  R  + +   + E+           GG     
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----------GG----- 75

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                  GI  D    A++ +L      E G ID+   NAG      PL + T E+ +  
Sbjct: 76  ----GAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDT 130

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
              N+ G +   ++A+ ++     G  +    G+ +G + TP  +VY ++K  LR    +
Sbjct: 131 FDRNVKGVLFTVQKALPLLAR---GSSVVLT-GSTAGSTGTPAFSVYAASKAALRSFARN 186

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
              + K   + ++T SPG   T  L
Sbjct: 187 WILDLKDRGIRINTLSPGPTETTGL 211

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  126 bits (318), Expect = 5e-34
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++TG T+G+G A+  EF   G  +   +R+   +   +++ +          G    
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ--------KKGF--- 63

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEI 172
                 +V G  CD     + +KL     + FG  +DI INN G  +  KP L +T E+ 
Sbjct: 64  ------QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDF 116

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 230
              +STNL  +   ++ A  +++     G+I  M    S  G  S  + ++Y +TK  L 
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFM---SSIAGVVSASVGSIYSATKGALN 172

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
           QL  +L  E     +  +  +P ++ T L
Sbjct: 173 QLARNLACEWASDGIRANAVAPAVIATPL 201

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  126 bits (319), Expect = 5e-34
 Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 19/206 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG+  G+G+A A      G  V    R+   V     E+          AGG     
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV--------GAGG----- 77

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV +   ++      V +FG +DI + NAG N  + P+      E ++ 
Sbjct: 78  ----QAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET 133

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           ++ NL G+ L     +  ++ +  GG I  +    G+   +TP    Y +TK     +  
Sbjct: 134 IAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQ 192

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
            L  E  +  + V+   PG + T++ 
Sbjct: 193 QLALELGKHHIRVNAVCPGAIETNIS 218

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  125 bits (317), Expect = 7e-34
 Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 23/210 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             + ITG+T G G+A AR F  +G  +V+  R  E ++    EL                
Sbjct: 22  STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK------------- 68

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  +  DV + A +    +    EF ++   INNAG   G  P      ++ +
Sbjct: 69  -----TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWD 123

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
            +V TN+ G +  TR  +  +     G  I N+   GS  G    P + VYG TK  + Q
Sbjct: 124 TMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNL---GSVAGKWPYPGSHVYGGTKAFVEQ 180

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLL 261
              +L  + + + V V    PG+  ++  L
Sbjct: 181 FSLNLRCDLQGTGVRVTNLEPGLCESEFSL 210

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  125 bits (316), Expect = 7e-34
 Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 28/210 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG T G+G A+A +F+  G +V++  R S+        +                  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---------GTPD----- 54

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               ++     D  +     KL +     FG +   +NNAG     K + + T  E  ++
Sbjct: 55  ----QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKL 109

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++ NL G    TR  ++ M+++  G  I NM  +  G    P    Y ++K  +R +  S
Sbjct: 110 LAVNLDGVFFGTRLGIQRMKNKGLGASIINM-SSIEGFVGDPSLGAYNASKGAVRIMSKS 168

Query: 236 LFKESKRSKVG-----VHTASPGMVLTDLL 260
              +            VH   PG + T L+
Sbjct: 169 AALDCALKDYDVRVNTVH---PGYIKTPLV 195

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  125 bits (315), Expect = 8e-34
 Identities = 46/245 (18%), Positives = 88/245 (35%), Gaps = 39/245 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +NV+   +  G+G   +RE +    +  V     E+          N K           
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK----------- 54

Query: 114 KNLVHAKVAGIACDVCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +     DV  P A+ +KL     ++  ++DI IN AG            + +I
Sbjct: 55  -----VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQI 100

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGS--GGSSTPLTAVYGSTKCG 228
           E+ ++ N  G +  T   +     +    GG I N+    S  G ++     VY ++K  
Sbjct: 101 ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANI---CSVTGFNAIHQVPVYSASKAA 157

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLL--LSGSTIQNKQMFNIICEL----PETV 282
           +     SL K +  + V  ++ +PG+  T L+   +       ++  ++        E  
Sbjct: 158 VVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQC 217

Query: 283 ARTLV 287
            +  V
Sbjct: 218 GQNFV 222

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  126 bits (318), Expect = 1e-33
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 17/206 (8%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITGS+ G+G++ A  F   G +V +  R+ + +  T  ++          AG  ++K 
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL--------KAGVPAEKI 80

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 174
                   +  DV E +    + N  + +FG IDI +NNAG              E  ++
Sbjct: 81  NA------VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK 134

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
               N    I  T++    +      G I N+    +G  +      Y   K  L Q   
Sbjct: 135 TFKLNFQAVIEMTQKTKEHLIKT--KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR 192

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
               +  +  V V++ SPG V T  +
Sbjct: 193 CTAIDLIQHGVRVNSVSPGAVATGFM 218

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  124 bits (314), Expect = 1e-33
 Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 28/208 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             V+ITG++RG+G+A AR     G RV + +R  + ++    ELE               
Sbjct: 6   GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-------------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV E  D  +        FG +   +NNAG     KP+ + T EE  
Sbjct: 52  -------ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWR 103

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
            ++ TNL G+ L  R A+  +  +  GG I N+   GS  G +     A Y ++K GL  
Sbjct: 104 LVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNV---GSLAGKNPFKGGAAYNASKFGLLG 159

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L  +   + + + V V    PG V T  
Sbjct: 160 LAGAAMLDLREANVRVVNVLPGSVDTGF 187

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  125 bits (317), Expect = 1e-33
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 18/205 (8%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++ G+G+A A  F   G +VVV +R+  ++     E+           GG     
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIA--------GGGG----- 57

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               + A +A DV + A  + L   AV  FG +D   NNAG       +   + E   + 
Sbjct: 58  ----EAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRET 113

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           + TNL  + L  +  +  +     GG +          +     A Y ++K GL  L  +
Sbjct: 114 LDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQA 172

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           L  E     + V+   PG   T   
Sbjct: 173 LAVELGARGIRVNALLPGGTDTPAN 197

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  124 bits (315), Expect = 1e-33
 Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 25/207 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++ G T G+G A  R  +  G  V++  R+  ++     E            G    
Sbjct: 9   KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----------GP--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  +  D+ +  ++  L   A    G+ID+   NAG ++  +P  Q +    +
Sbjct: 55  ------RVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSE-LEPFDQVSEASYD 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +  + N  G+    +    ++R+   GG I     + +     P  +VY ++K  L    
Sbjct: 108 RQFAVNTKGAFFTVQRLTPLIRE---GGSIVFT-SSVADEGGHPGMSVYSASKAALVSFA 163

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
           + L  E     + V++ SPG + T   
Sbjct: 164 SVLAAELLPRGIRVNSVSPGFIDTPTK 190

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  123 bits (312), Expect = 2e-33
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 27/206 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG+ +G+G+   +    SG +VV  +R++        +L    KE          
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS-------DLVSLAKEC--------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +  +  D+ +    +K    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 52  -----PGIEPVCVDLGDWDATEK----ALGGIGPVDLLVNNAALVI-MQPFLEVTKEAFD 101

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +  S NL      ++   R M ++   G I N+  +     + P    Y STK  +  L 
Sbjct: 102 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNV-SSMVAHVTFPNLITYSSTKGAMTMLT 160

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            ++  E    K+ V++ +P +VLTD+
Sbjct: 161 KAMAMELGPHKIRVNSVNPTVVLTDM 186

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  123 bits (311), Expect = 3e-33
 Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 31/208 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V++TG+ +G+G+   +    +G RVV  SR+         +L+  ++E          
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA-------DLDSLVREC--------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +  +  D+ +    ++    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 52  -----PGIEPVCVDLGDWEATER----ALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFD 101

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
           +    NL   I  ++   R +  +   G I N+    S     +    +VY STK  L  
Sbjct: 102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNV---SSQCSQRAVTNHSVYCSTKGALDM 158

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDL 259
           L   +  E    K+ V+  +P +V+T +
Sbjct: 159 LTKVMALELGPHKIRVNAVNPTVVMTSM 186

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  123 bits (312), Expect = 4e-33
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 19/206 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG   GLG+A A      G ++ +   SSE +  +   + E        A       
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE-------TAPD----- 63

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
              A+V     DV + A V+         FG ID + NNAG      P   FT  E +++
Sbjct: 64  ---AEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV 120

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           VS NL G  L   + +++MR+Q   G + N     G  G      + Y + K G+  L  
Sbjct: 121 VSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGI--GNQSGYAAAKHGVVGLTR 177

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
           +   E  R  + ++  +PG + T ++
Sbjct: 178 NSAVEYGRYGIRINAIAPGAIWTPMV 203

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  123 bits (312), Expect = 4e-33
 Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 20/207 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  VITGST G+G A+AR    +G  +V+    +     TVT+           + G   
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAG------LSSG--- 76

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V     D+ +P+++  +     + FG  DI +NNAG     + +  F  E+ +
Sbjct: 77  ------TVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWD 129

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 232
           +I++ NL  S    R A+  M+ +   G I N+    G   S  P  + Y + K G+  L
Sbjct: 130 RIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGLVAS--PFKSAYVAAKHGIMGL 186

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             ++  E   S V V++  PG VLT L
Sbjct: 187 TKTVALEVAESGVTVNSICPGYVLTPL 213

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  123 bits (310), Expect = 6e-33
 Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 21/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG+  G+G+A+A  F  +G  VVV    SE        +          AGG   
Sbjct: 13  AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR--------QAGG--- 61

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K  G+ C+V +    + +   A+++FG I + +NNAG              + E
Sbjct: 62  ------KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGP--KPFDMPMSDFE 113

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
                NL      ++ A   M+    GG I N+  + +G ++    A YGS+K  +  L 
Sbjct: 114 WAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNI-SSMAGENTNVRMASYGSSKAAVNHLT 171

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            ++  +     + V+  +PG + TD L
Sbjct: 172 RNIAFDVGPMGIRVNAIAPGAIKTDAL 198

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  123 bits (311), Expect = 6e-33
 Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 20/213 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
           V++TG +RG+G A+ R     G RV V  + + E+    V  +          +GG    
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT--------ESGG---- 76

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                +   I  DV   AD+  + +    +FG +D  +NNAG     + + + + E IE+
Sbjct: 77  -----EAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIER 131

Query: 175 IVSTNLVGSILCTREAMRVMRDQ--PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++  N+ GSILC  EA+R M      +GG I N+    +   S      Y ++K  +   
Sbjct: 132 MLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTF 191

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
              L +E     + V+   PG++ TDL  SG  
Sbjct: 192 TIGLAREVAAEGIRVNAVRPGIIETDLHASGGL 224

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  123 bits (310), Expect = 1e-32
 Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGG 110
           + V+ITG++ G+GKA A E+L + +   ++++A+R  E +      +++           
Sbjct: 34  KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA------ 87

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
                    KV     D+ +   ++        EF  IDI +NNAG   G   + Q   E
Sbjct: 88  ---------KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATE 138

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCG 228
           +I+ +  TN+   I  T+  + + + +   G I N+   GS  G  + P  ++Y ++K  
Sbjct: 139 DIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNL---GSIAGRDAYPTGSIYCASKFA 194

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 261
           +     SL KE   +K+ V   +PG+V T+  L
Sbjct: 195 VGAFTDSLRKELINTKIRVILIAPGLVETEFSL 227

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  122 bits (308), Expect = 1e-32
 Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 20/207 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TGST G+G  +A      G  +V+                E ++ G+ A  G   
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHG--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV     D+ +   V+ L + AV + G IDI +NNAG       +  F  E+ +
Sbjct: 55  -----VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWD 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQL 232
            I++ NL      T  A+  M+ Q   G I N+  A G   S     + Y + K G+   
Sbjct: 109 AILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVAS--ANKSAYVAAKHGVVGF 165

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
                 E+    +  +   PG V T L
Sbjct: 166 TKVTALETAGQGITANAICPGWVRTPL 192

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  123 bits (311), Expect = 1e-32
 Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 22/215 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R   +TG   G+G  L R+ L  G +V +A    +S+   +  LE           G   
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA-------EGSG--- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V G+  DV      +  ++     FG + I  NNAG N   +P+ + + ++ +
Sbjct: 59  -----PEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLF-QPIEESSYDDWD 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
            ++  NL G +      +  M ++      KGGH+ N         +     +Y +TK  
Sbjct: 113 WLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA-AFLAAGSPGIYNTTKFA 171

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 263
           +R L  SL     + ++GV    PG+V + +  S 
Sbjct: 172 VRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  121 bits (307), Expect = 1e-32
 Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 17/207 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R +++TG+ RG+G A AR +   G  VV+  R+  S+     +++        +AG    
Sbjct: 15  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIK--------SAGQPQ- 65

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +  +  +       ++L+    +EFG +D  ++NA       PL Q  +E+  
Sbjct: 66  -----PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFM 120

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           Q++  N+  + + TR  + +++        F     G  G        YG +K     L 
Sbjct: 121 QVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR--ANWGAYGVSKFATEGLM 178

Query: 234 ASLFKE-SKRSKVGVHTASPGMVLTDL 259
            +L  E    + V  ++ +PG   T +
Sbjct: 179 QTLADELEGVTAVRANSINPGATRTGM 205

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  122 bits (308), Expect = 2e-32
 Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)

Query: 54  RNVVITG-STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           + V++T  +  G+G   AR  LL G  VV++      +  T  +L           G   
Sbjct: 23  KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA--------DLGL-- 72

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +V  + CDV     V  L    V + G +D+ +NNAG      P++  T+EE 
Sbjct: 73  ------GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEW 125

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +++++  L   +  TR A+R  R    GG I N   +  G  +    + Y + K G+  L
Sbjct: 126 DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNN-ASVLGWRAQHSQSHYAAAKAGVMAL 184

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
                 E+    V ++  SP +     L
Sbjct: 185 TRCSAIEAVEFGVRINAVSPSIARHKFL 212

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  121 bits (307), Expect = 2e-32
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 32/224 (14%)

Query: 40  GANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 99
             +M  E       +  ++TGS  G+G+A A      G  VVVA  ++E+      ++  
Sbjct: 2   PGSMRFEN------KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV- 54

Query: 100 NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 159
                  A GG             +A DV +P   + +++  + EFG ID  +NNA    
Sbjct: 55  -------ADGG---------TAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFG 98

Query: 160 GFK--PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSST 216
           G K   LL    E  ++ +S NL G++ CTR   + M  +  GG I N    A    S  
Sbjct: 99  GMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLYS-- 155

Query: 217 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
                YG  K G+  L   L +E     + ++  +PG + T+  
Sbjct: 156 ---NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN 196

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  124 bits (312), Expect = 2e-32
 Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 14/205 (6%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             V ITG++RG+GKA+A +    G  +V+A+++++     +  +    +E + A GG   
Sbjct: 46  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE-IEAVGG--- 101

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K      DV +   +      A+ +FG IDI +NNA         L    + ++
Sbjct: 102 ------KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLD 154

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 232
            +++ N  G+ L ++  +  ++   K  HI N+                Y   K G+   
Sbjct: 155 LMMNVNTRGTYLASKACIPYLKKS-KVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMY 213

Query: 233 QASLFKESKRSKVGVHTASPGMVLT 257
              + +E K  ++ V+   P   + 
Sbjct: 214 VLGMAEEFK-GEIAVNALWPKTAIH 237

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  121 bits (307), Expect = 2e-32
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG+  G G+ +A+ F   G +VV+  R          E+           G      
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----------GD----- 55

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +A D+ + ADV      A+++FG +DI +NNAG     +       EE ++I
Sbjct: 56  ----AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRI 111

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGH---IFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           V  N+ G  L T + +   ++    G    I N+  +   G   P  A Y +TK  +  +
Sbjct: 112 VGVNVRGVYLMTSKLIPHFKENGAKGQECVILNV-ASTGAGRPRPNLAWYNATKGWVVSV 170

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             +L  E   +K+ V   +P    T LL
Sbjct: 171 TKALAIELAPAKIRVVALNPVAGETPLL 198

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  121 bits (307), Expect = 2e-32
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGS RGLG A A     +G RV++    +  +  +V  L           G    
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT--------RKGY--- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                    G+A DV +   ++   +    E   +DI INNAG     KP+++   E  +
Sbjct: 59  ------DAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR-KPMVELELENWQ 111

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-----GGSSTPLTAVYGSTKCG 228
           +++ TNL  + L +R A + M  +  GG I N+   GS          P  A Y + K G
Sbjct: 112 KVIDTNLTSAFLVSRSAAKRMIARNSGGKIINI---GSLTSQAAR---PTVAPYTAAKGG 165

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           ++ L  S+  E  +  +  +   PG +LTD+
Sbjct: 166 IKMLTCSMAAEWAQFNIQTNAIGPGYILTDM 196

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  121 bits (306), Expect = 3e-32
 Identities = 48/212 (22%), Positives = 75/212 (35%), Gaps = 23/212 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + +++TG  RG+G A  R    +G  V V  RS+        ++ +         G    
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK-------EFGV--- 64

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K     CDV     V K       + G I   I NAG +   KP  + T+E+  
Sbjct: 65  ------KTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV-KPATELTHEDFA 117

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM------DGAGSGGSSTPLTAVYGSTKC 227
            +   N+ G     R   ++   + + G I             S  + +     Y S+K 
Sbjct: 118 FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKA 177

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
               L   L  E   + + V+  SPG V TD 
Sbjct: 178 ACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  120 bits (304), Expect = 4e-32
 Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 22/220 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 112
           R +V+ G+ R +G+A A  F   G  VV+  + ++E     V E+E          G   
Sbjct: 9   RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE--------KLGR-- 58

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                      I  D+   A+V+   + A ++FG I   ++ AG     K + +      
Sbjct: 59  -------SALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFW 111

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            Q++  NL    L  + A+  M    KGG I             P    Y ++K  +   
Sbjct: 112 HQVLDVNLTSLFLTAKTALPKMA---KGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTF 168

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 272
              L KE    K+ V+   PGM+ T    + +  + ++  
Sbjct: 169 TRGLAKEVG-PKIRVNAVCPGMISTTFHDTFTKPEVRERV 207

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  120 bits (304), Expect = 4e-32
 Identities = 25/209 (11%), Positives = 58/209 (27%), Gaps = 35/209 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +N+++ G +  LG  + + F       +                                
Sbjct: 23  KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP------------------------ 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                              +++ +     ++   +D ++  AG   G         + ++
Sbjct: 59  -----NADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVK 113

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++  NL  +        +++    +GG      GA +  + T     YG+TK     + 
Sbjct: 114 GMIDMNLYSAFASAHIGAKLLN---QGGLFVLT-GASAALNRTSGMIAYGATKAATHHII 169

Query: 234 ASLFKESKRSKVG--VHTASPGMVLTDLL 260
             L  E+     G       P  + T   
Sbjct: 170 KDLASENGGLPAGSTSLGILPVTLDTPTN 198

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  120 bits (303), Expect = 4e-32
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG++ G+G+A AR     G  V +A+R  E       +L   L + + AAG    
Sbjct: 8   KVALITGASSGIGEATARALAAEGAAVAIAARRVE-------KLRA-LGDELTAAGA--- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV  +  DV +   V       V   G +DI +NNAG      P+      +  
Sbjct: 57  ------KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGI-MLLGPVEDADTTDWT 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
           +++ TNL+G +  TR A+  +      G +  M    S  G  +    AVY +TK G+  
Sbjct: 110 RMIDTNLLGLMYMTRAALPHLLRS--KGTVVQM---SSIAGRVNVRNAAVYQATKFGVNA 164

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLL 260
              +L +E     V V    PG   T+L 
Sbjct: 165 FSETLRQEVTERGVRVVVIEPGTTDTELR 193

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  120 bits (304), Expect = 5e-32
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 112
           +  ++TG++RG+G A+A      G  VV+  +  + +      ++E        AAGG  
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE--------AAGG-- 77

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  K      DV +PA V++L   A   FG +D+ +NNAG       + +  +   
Sbjct: 78  -------KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP-LTTIAETGDAVF 129

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +++++ NL G+    REA + +R    GG I NM      G   P   +Y + K G+  +
Sbjct: 130 DRVIAVNLKGTFNTLREAAQRLRV---GGRIINM-STSQVGLLHPSYGIYAAAKAGVEAM 185

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 272
              L KE +   + V+  +PG   TDL L G + + +  F
Sbjct: 186 THVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRF 225

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  120 bits (304), Expect = 5e-32
 Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 31/210 (14%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+ +G+G+A A   LL G +V +   + E+       L E  +             
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ----------- 58

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               K   I CDV +   ++      V+ FG +DI +NNAG N           +  E+ 
Sbjct: 59  ----KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKT 105

Query: 176 VSTNLVGSILCTREAMRVMRDQPKG--GHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 232
           +  NLV  I  T   +  M  Q  G  G I NM   AG          VY ++K G+   
Sbjct: 106 LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--AQQPVYCASKHGIVGF 163

Query: 233 --QASLFKESKRSKVGVHTASPGMVLTDLL 260
              A+L      S V ++   PG V T +L
Sbjct: 164 TRSAALAANLMNSGVRLNAICPGFVNTAIL 193

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  120 bits (303), Expect = 5e-32
 Identities = 44/232 (18%), Positives = 83/232 (35%), Gaps = 28/232 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TG+T G+G  + ++ L     V    R+ E        L   L E          
Sbjct: 6   KIAVVTGATGGMGIEIVKD-LSRDHIVYALGRNPE-------HLAA-LAEI--------- 47

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V  I  D+ +    +   +  +     +D  ++ A   +    +   +  E  
Sbjct: 48  -----EGVEPIESDIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARD-TTIEAGSVAEWH 100

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
             +  N++     +R+ +  +R     G +  +  +G+G    P   +Y ++K  LR L 
Sbjct: 101 AHLDLNVIVPAELSRQLLPALRA--ASGCVIYI-NSGAGNGPHPGNTIYAASKHALRGLA 157

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 285
            +  KE   + + V T SPG   T +L      Q       I   P+ +A  
Sbjct: 158 DAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANA 209

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  121 bits (305), Expect = 5e-32
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 23/205 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+  G+G A+AR     G  V+ A    ++     T++           G      
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----------GC----- 75

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                 A    DV +   +  + +  V  FG +D  + NAG       L+  T E+ +++
Sbjct: 76  ----GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRV 130

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++ NL G+ LCT+ A   M ++  GG I N+  + +G  +   T  YG +K G+ QL   
Sbjct: 131 IAINLRGAWLCTKHAAPRMIER-GGGAIVNL-SSLAGQVAVGGTGAYGMSKAGIIQLSRI 188

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
              E + S +  +T  P  V T + 
Sbjct: 189 TAAELRSSGIRSNTLLPAFVDTPMQ 213

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  120 bits (303), Expect = 7e-32
 Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGST G+GKA+A   +  G  V++  R  E+V  T+ E+         A      
Sbjct: 11  KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIR--------AQYPD-- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A +  +  D+      Q +    + ++  +DI INN G  +         +E+  
Sbjct: 61  -----AILQPVVADLGTEQGCQDV----IEKYPKVDILINNLGIFEP-VEYFDIPDEDWF 110

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++   N++  +  TR  ++ M ++ K G +  +  + +    +   A Y +TK     L 
Sbjct: 111 KLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFI-ASEAAIMPSQEMAHYSATKTMQLSLS 168

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            SL + +  + V V+T  PG  LT+ 
Sbjct: 169 RSLAELTTGTNVTVNTIMPGSTLTEG 194

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  120 bits (303), Expect = 7e-32
 Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 38/251 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TG++RG+G+ +A +   +G  V +  R  +++R+   E +        + GG   
Sbjct: 6   QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ--------SLGG--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNE-FGSIDIWINNAG------TNKGFKPLLQ 166
                 +   + CD  + ++V+ L      E  G +D+ +NNA        N   K   +
Sbjct: 55  ------QCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWE 108

Query: 167 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGST 225
                 + I +  L G   C+    R+M      G I  +                YG  
Sbjct: 109 TPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQY---MFNVPYGVG 164

Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL---------LSGSTIQNKQMFNIIC 276
           K    +L A    E +R  V   +  PG+V T+LL         L    ++  +      
Sbjct: 165 KAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSA 224

Query: 277 ELPETVARTLV 287
           E  E   + +V
Sbjct: 225 ETTELSGKCVV 235

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  118 bits (298), Expect = 1e-31
 Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 41/236 (17%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG+T GLG A AR   L G  ++++ R + ++     E+                  
Sbjct: 3   VLITGATGGLGGAFARA--LKGHDLLLSGRRAGALAELAREV------------------ 42

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  D+ +  + + L    + E G +D+ ++  G   G   + +   + +E++
Sbjct: 43  ----GARALPADLADELEAKAL----LEEAGPLDLLVHAVGKA-GRASVREAGRDLVEEM 93

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           ++ +L+         ++  R Q KG       GA       P  A Y + K  L     +
Sbjct: 94  LAAHLLT----AAFVLKHARFQ-KGARAVFF-GAYPRYVQVPGFAAYAAAKGALEAYLEA 147

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 291
             KE  R  V +       V T L    + +       +    PE  AR ++  + 
Sbjct: 148 ARKELLREGVHLVLVRLPAVATGLW---APLGGPPKGAL---SPEEAARKVLEGLF 197

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  119 bits (301), Expect = 1e-31
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 20/207 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++ G G A+A  FL  GDRV     S+E++  T             A        
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH-------AYAD----- 52

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--TNKGFKPLLQFTNEEIE 173
               KV  +  DV +  DV       + +FG+ID+ +NNAG   N     L     E+ +
Sbjct: 53  ----KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFD 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++++ N+ G  L  R  +  M  Q   G I N+  + +   + P  + Y ++K  + QL 
Sbjct: 109 KVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNI-ASVASLVAFPGRSAYTTSKGAVLQLT 166

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            S+  +   S +  +   PGM+ T + 
Sbjct: 167 KSVAVDYAGSGIRCNAVCPGMIETPMT 193

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  120 bits (303), Expect = 1e-31
 Identities = 44/210 (20%), Positives = 82/210 (39%), Gaps = 25/210 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +   +TGS+ G+G A+A  +  +G  V +   S  +        +          G    
Sbjct: 35  KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK--------TYGV--- 83

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEI 172
                       C++ +P  V++  +    +FG+ID+++ NAG      P +     +  
Sbjct: 84  ------HSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSW 137

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN---MDGAGSGGSSTPLTAVYGSTKCGL 229
            +I+S +L G   C+    ++ +     G +     +  +G   +   L A Y + K   
Sbjct: 138 NKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSI--SGKIVNIPQLQAPYNTAKAAC 194

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
             L  SL  E       V+T SPG + TD+
Sbjct: 195 THLAKSLAIEW-APFARVNTISPGYIDTDI 223

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  119 bits (301), Expect = 1e-31
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + VVITG+++G+G  L R +     RVV  SRS +                  +A     
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP-----------------SADP--- 68

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +  +A D+ +P    ++    +  FG ID  +NNAG     KP ++ T E+ +
Sbjct: 69  ------DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYD 121

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 232
             +  N+ G    T+ A   M  Q   GHI ++             +A+   TK GL  +
Sbjct: 122 HNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAV 180

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             SL  E  RS V V+  SPG++ T +
Sbjct: 181 TRSLAMEFSRSGVRVNAVSPGVIKTPM 207

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  119 bits (302), Expect = 1e-31
 Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 21/233 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITGS+ G+G+  A  F   G  V +  RSSE +  T   + +        +G S K+ 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK--------SGVSEKQ- 59

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEI 172
                V  +  DV       ++ N  + +FG ID+ +NNAG    +           +  
Sbjct: 60  -----VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY 114

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            + +  NL   I  T++    +      G I N+    +G  + P    Y   K  L Q 
Sbjct: 115 HKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQY 172

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL--LSGSTIQNKQMFNIICELPETVA 283
             S   +  +  + V++ SPGMV T     +      +++ +N +    E + 
Sbjct: 173 TRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP 225

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  120 bits (302), Expect = 1e-31
 Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 24/235 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           + TG+ RG+G+ +A E    G  VVV    SS++    V EL+          G      
Sbjct: 25  LTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK--------KLGA----- 71

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   I  D+ +P++V  L + AV+ FG +D  ++N+G    +   L+ T E  +++
Sbjct: 72  ----QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKV 126

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            + N  G     ++ ++  R    GG I       +  +  P  A+Y  +K  +     +
Sbjct: 127 FNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRA 183

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 290
              +     V V+  +PG V TD+    S       +  +    E +   L    
Sbjct: 184 FAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM--PQEKIDEGLANMN 236

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  118 bits (299), Expect = 2e-31
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 26/207 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG+T G G+ + R F+  G +V+   R  E ++    EL                  
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------------- 45

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                +     DV   A ++++      E+ +IDI +NNAG   G +P  + + E+ E +
Sbjct: 46  ---DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM 102

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQ 233
           + TN  G +  TR  +  M ++   GHI N+   GS  G        VYG+TK  +RQ  
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVER-NHGHIINI---GSTAGSWPYAGGNVYGATKAFVRQFS 158

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L  +   + V V    PG+V     
Sbjct: 159 LNLRTDLHGTAVRVTDIEPGLVGGTEF 185

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  119 bits (301), Expect = 2e-31
 Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 12/205 (5%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + + I+G +RG+G A+A+     G  V + ++S+E        +    KE +  AGG   
Sbjct: 10  KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKE-IEEAGG--- 65

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   I  D+ +   V       V +FG IDI +NNA        + +   +  +
Sbjct: 66  ------QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFD 118

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            +    + G+   ++  +  M+ +    HI  +               Y   K G+    
Sbjct: 119 LMNGIQVRGTYAVSQSCIPHMKGR-DNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCA 177

Query: 234 ASLFKESKRSKVGVHTASPGMVLTD 258
             + +E + + +  +T  P   +  
Sbjct: 178 LGIAEELRDAGIASNTLWPRTTVAT 202

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  118 bits (298), Expect = 4e-31
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 24/205 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VV+TG  RG+G  + R F+ SG RVV+  +     R    EL                  
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---------------- 55

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   I CDV +  DV+ L +  +  FG +D  +NNAG +   +   + + +   Q+
Sbjct: 56  -----AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQL 110

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL+G+   T+ A+  +R     G++ N+  +  G         Y +TK  +  +  +
Sbjct: 111 LELNLLGTYTLTKLALPYLRKS--QGNVINI-SSLVGAIGQAQAVPYVATKGAVTAMTKA 167

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           L  +     V V+  SPG + T L 
Sbjct: 168 LALDESPYGVRVNCISPGNIWTPLW 192

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  118 bits (298), Expect = 4e-31
 Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 13/205 (6%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + + ITG++RG+G A+A      G  V +A++S+ +       +       + AAGG   
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAA-VNAAGG--- 62

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   + CD+ E   V+      V+ FG IDI +NNA      +  L    +  +
Sbjct: 63  ------QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFD 115

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 232
            +   N  GS +C +  +  +       HI  +        +       Y   K G+  +
Sbjct: 116 LMQQVNARGSFVCAQACLPHLLQA-PNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLV 174

Query: 233 QASLFKESKRSKVGVHTASPGMVLT 257
              L  E     V ++   P  V+ 
Sbjct: 175 TLGLAAEFGPQGVAINALWPRTVIA 199

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  118 bits (298), Expect = 4e-31
 Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG +RGLG  +A+    +G  VVVASR+ E       +L E         G    
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE-------KYGV--- 71

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +     CDV    +V+KL      +FG +D  +N AG N+   P  +F  +E  
Sbjct: 72  ------ETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR-HPAEEFPLDEFR 124

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           Q++  NL G+    REA  ++R+      I N+        + P  + Y ++K G+  L 
Sbjct: 125 QVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEEVTMPNISAYAASKGGVASLT 183

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L KE  R  + V+  +PG   T +
Sbjct: 184 KALAKEWGRYGIRVNVIAPGWYRTKM 209

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  118 bits (298), Expect = 4e-31
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 22/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 112
           +   +TG +RG+G A+A+   L G  V +    ++E  +  V+E+E         AGG  
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE--------QAGG-- 81

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +   I  D  +   +++     V   G +DI +N+AG      PL + T  + 
Sbjct: 82  -------RAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH-SAPLEETTVADF 133

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           +++++ N     +  R A R + D   GG I  +    +     P  ++Y ++K  L  L
Sbjct: 134 DEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLYSASKAALAGL 190

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
              L ++     + V+   PG   TD+
Sbjct: 191 TKGLARDLGPRGITVNIVHPGSTDTDM 217

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  118 bits (297), Expect = 5e-31
 Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 25/206 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +++G  RG+G +  R  +  G +VV      E  +    EL                  
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----------AD----- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  DV +PA  +   + AV  FG + + +NNAG       +  +   E ++I
Sbjct: 54  ----AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRI 108

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           +  NL G  L  R  ++ M++    G I N+    G  G+       Y +TK  +R L  
Sbjct: 109 LDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGT--VACHGYTATKFAVRGLTK 165

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
           S   E   S + V++  PG+V T + 
Sbjct: 166 STALELGPSGIRVNSIHPGLVKTPMT 191

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  118 bits (298), Expect = 5e-31
 Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 25/220 (11%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            +  ++TG++ G G+A+A   + +GD V+  +R +E++   V    +  +          
Sbjct: 5   AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAE---------- 54

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEE 171
                      I+ DV +   +  ++   +  +G +D+ +NNAG T  G     + T  E
Sbjct: 55  ----------AISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERE 102

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
           +  +   ++ G    TR  +  MR++   G + N+  +  G  S    + Y +TK  L Q
Sbjct: 103 LRDLFELHVFGPARLTRALLPQMRER-GSGSVVNI-SSFGGQLSFAGFSAYSATKAALEQ 160

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 271
           L   L  E     + V    PG   T+L   G+   +++ 
Sbjct: 161 LSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEEN 200

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  118 bits (297), Expect = 6e-31
 Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 22/233 (9%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           ++TGS RG+G A+A      G +VVV  + S++     V+E++        A G      
Sbjct: 22  LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK--------ALGS----- 68

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   I  D+ +  ++ KL + AV  FG +DI ++N+G    F  L   T EE +++
Sbjct: 69  ----DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRV 123

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            S N  G     REA R + +   GG I       S   S P  ++Y  +K  +      
Sbjct: 124 FSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRI 180

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 288
             K+    K+ V+  +PG  +TD+    S        +   E  + +A    P
Sbjct: 181 FSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP 233

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  119 bits (299), Expect = 6e-31
 Identities = 60/314 (19%), Positives = 107/314 (34%), Gaps = 36/314 (11%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            + ++ITG++ G G+  A     +G RV  + R       +  E                
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD-------- 56

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                   +  +  DV     V +  +  + E G ID+ I+NAG    F P   FT E+ 
Sbjct: 57  ----NDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQF 111

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
            ++   N++ +    R A+  MR Q K G +  +  + S G + P  A Y + K  +  +
Sbjct: 112 AELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAI 170

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 292
                +E  R  +      PG   +          +     +  +          P   +
Sbjct: 171 AVQYARELSRWGIETSIIVPGAFTSG-------TNHFAHSGVPDDHARQAEYEAGPNAGL 223

Query: 293 VKGSGKAINYLTPP--------RILLALVTAW-----LRRGRWFDDQGRALYAAEADRIR 339
            +   KA   + PP          ++ +V         R      + G  +  +  DR+R
Sbjct: 224 GEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGFSVLDRLR 283

Query: 340 NWAENRARFSFTDA 353
             AE   R   +D 
Sbjct: 284 --AEMLHRVGLSDL 295

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  117 bits (296), Expect = 7e-31
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 34/217 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSS 112
           + V+ITGS++G+G A AR F  +G +V +  R + + +  T+  +         A GG  
Sbjct: 8   KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMR--------ADGG-- 57

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                    A  A D+      Q+L +  V +FG ID+ INNAG   G KPL +  +   
Sbjct: 58  -------DAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFY 110

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNM------DGAGSGGSSTPLTAVY 222
           + ++  N+   ++ T+ A+  +        +   + +        G G G        +Y
Sbjct: 111 DAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA------GLY 164

Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           G+ K  L  +  +      +  V  +  SPG V T  
Sbjct: 165 GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  117 bits (295), Expect = 7e-31
 Identities = 63/206 (30%), Positives = 91/206 (44%), Gaps = 25/206 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG  RGLG   AR+ + +G RVV+A    E    T  EL           G      
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----------GD----- 51

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      DV    D Q++  +A  EFGS+D  +NNAG +     L   + E   ++
Sbjct: 52  ----AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS-TGMFLETESVERFRKV 106

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           V  NL G  +  +  +  M+D   GG I N+   AG  G    LT+ YG++K G+R L  
Sbjct: 107 VEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGL--ALTSSYGASKWGVRGLSK 163

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
               E    ++ V++  PGM  T + 
Sbjct: 164 LAAVELGTDRIRVNSVHPGMTYTPMT 189

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  117 bits (295), Expect = 9e-31
 Identities = 54/253 (21%), Positives = 88/253 (34%), Gaps = 41/253 (16%)

Query: 56  VVITGSTRGLGKALAREF---LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
            V+TG++RG G+ALA +    L  G  ++V++RS   +R    EL     +         
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL-------- 60

Query: 113 KKNLVHAKVAGIACDVCEPADVQKL----SNFAVNEFGSIDIWINNAGT--NKGFKPLLQ 166
                  KV   A D+   A VQ+L          E     + INNA T  +     L  
Sbjct: 61  -------KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNV 113

Query: 167 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGSGGSSTPLT--AVYG 223
               E+    + NL   +  T   +   +D P     + N+    S  +  P     +Y 
Sbjct: 114 NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNI---SSLCALQPYKGWGLYC 170

Query: 224 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD----LLLSGSTIQNKQMFNIICEL- 278
           + K     L   L  E     V V + +PG +  D       +    + +     +    
Sbjct: 171 AGKAARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG 228

Query: 279 ----PETVARTLV 287
                 T A+ L+
Sbjct: 229 ALVDCGTSAQKLL 241

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  116 bits (294), Expect = 1e-30
 Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 19/205 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+T  + GLG A A E   +G R+++ SR+ E +    + +        + +G    
Sbjct: 8   KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIAS------LVSGA--- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  +A D+ EP D+ +L      + G  DI + + G  +     ++   E+ +
Sbjct: 59  ------QVDIVAGDIREPGDIDRLFE-KARDLGGADILVYSTGGPRP-GRFMELGVEDWD 110

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +        ++   R A   M ++   G +  + G+ +        A+    +  +  + 
Sbjct: 111 ESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYI-GSVTLLRPWQDLALSNIMRLPVIGVV 168

Query: 234 ASLFKESKRSKVGVHTASPGMVLTD 258
            +L  E     V V+   P ++LTD
Sbjct: 169 RTLALELAPHGVTVNAVLPSLILTD 193

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  116 bits (292), Expect = 1e-30
 Identities = 46/235 (19%), Positives = 86/235 (36%), Gaps = 37/235 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           +VITG++ GLG  LA+ +   G    +  RS   +      L  N               
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNN--------------- 48

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                V   A D+    +V++L              +++AG +  F  L +   E+I+ +
Sbjct: 49  -----VGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAG-SGYFGLLQEQDPEQIQTL 99

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQ 233
           +  NL  +I   RE ++  +DQ    ++  +    S          + Y + K  ++ L 
Sbjct: 100 IENNLSSAINVLRELVKRYKDQ--PVNVVMI---MSTAAQQPKAQESTYCAVKWAVKGLI 154

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQMFNIICELPETVARTLV 287
            S+  E K   + +    PG + T+    SG ++      +      E  A  + 
Sbjct: 155 ESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMS-----AEDAALMIH 204

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  117 bits (295), Expect = 1e-30
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 22/204 (10%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           ++TG+ RG+G+ +A E    G +V+V  + S+ES    V  ++          G      
Sbjct: 33  LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK--------KNGS----- 79

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                 A +  +V    D+ ++   AV  FG +DI  +N+G    F  +   T EE +++
Sbjct: 80  ----DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRV 134

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            + N  G     REA + +     GG +  M        + P  AVY  +K  +      
Sbjct: 135 FTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARC 191

Query: 236 LFKESKRSKVGVHTASPGMVLTDL 259
           +  +    K+ V+  +PG + TD+
Sbjct: 192 MAIDMADKKITVNVVAPGGIKTDM 215

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  116 bits (292), Expect = 2e-30
 Identities = 30/206 (14%), Positives = 58/206 (28%), Gaps = 27/206 (13%)

Query: 57  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 116
           ++T +    G A        G  VV    S         +  E  +      G       
Sbjct: 5   LVTHARHFAGPAAVEALTQDGYTVVCHDASFA-------DAAERQRFESENPGT------ 51

Query: 117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQ 174
                             ++L +  +    +ID  ++N    +     PL   +  +I Q
Sbjct: 52  ----------IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQ 101

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           +     +  IL  + A+  +R    G  +  +  +  G        +YG  +     L  
Sbjct: 102 MFEALSIFPILLLQSAIAPLRAA-GGASVIFI-TSSVGKKPLAYNPLYGPARAATVALVE 159

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
           S  K   R  + ++   P        
Sbjct: 160 SAAKTLSRDGILLYAIGPNFFNNPTY 185

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  116 bits (293), Expect = 2e-30
 Identities = 52/209 (24%), Positives = 78/209 (37%), Gaps = 21/209 (10%)

Query: 54  RNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 111
           + VV+TG+   +G+G   AR     G  V +   S           EEN+KE     G  
Sbjct: 21  KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ------GAEENVKELEKTYGI- 73

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                   K     C V      +KL    V +FG ID +I NAG       +L  + E 
Sbjct: 74  --------KAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD-SGILDGSVEA 124

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLR 230
              +V  +L G+  C +      +++   G +      +G   +       Y   K G  
Sbjct: 125 WNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMSGHIANFPQEQTSYNVAKAGCI 183

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDL 259
            +  SL  E  R    V++ SPG + T L
Sbjct: 184 HMARSLANEW-RDFARVNSISPGYIDTGL 211

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  116 bits (292), Expect = 2e-30
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 23/207 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
               +TG+  G+G  + R F  SG R+++  R + ++     EL                
Sbjct: 12  ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA-------------- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A  A I  DV +   +   +         + I +N+AG  +     L+  +    
Sbjct: 58  -----AVAARIVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARL-HDALETDDATWR 110

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 232
           Q+++ N+ G    +R   R M  +   G I N+   +G+  +     + Y ++K  + QL
Sbjct: 111 QVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQL 169

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L  E     V V+  +PG V T++
Sbjct: 170 TRALAAEWAGRGVRVNALAPGYVATEM 196

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  115 bits (291), Expect = 3e-30
 Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 24/207 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGST G+G  +A+    +G  +V+      +    + E+           G    
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAP--ALAEIA--------RHGV--- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K      D+ + A ++ L   A  EFG +DI +NNAG      P+ QF  E  +
Sbjct: 52  ------KAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHV-APVEQFPLESWD 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 232
           +I++ NL      TR A+  MR +   G I N+    G  GS     A Y + K G+  L
Sbjct: 105 KIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASVHGLVGS--TGKAAYVAAKHGVVGL 161

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
              +  E+  S V  +   PG VLT L
Sbjct: 162 TKVVGLETATSNVTCNAICPGWVLTPL 188

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  116 bits (293), Expect = 3e-30
 Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 28/209 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG   GLG+AL   F+  G RV V  +S+E +R                 GG     
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----------GG----- 51

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--- 172
                  G+  DV    D ++ +   +  FG ID  I NAG       L     ++I   
Sbjct: 52  ----NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAA 107

Query: 173 -EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            + I   N+ G I   +  +  +      G +     + +G        +Y +TK  +  
Sbjct: 108 FDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFT-ISNAGFYPNGGGPLYTATKHAVVG 164

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLL 260
           L   +  E     V V+  +PG + TDL 
Sbjct: 165 LVRQMAFELAP-HVRVNGVAPGGMNTDLR 192

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  116 bits (292), Expect = 3e-30
 Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 20/235 (8%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG   G+G+  A+ F+  G +VV+A  + +  +     +                  
Sbjct: 19  AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--------------- 63

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 174
                ++ + CDV +  DV+ L +  + + G +DI   N G  +     +L+  NE+ ++
Sbjct: 64  ---DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR 120

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           ++  N+ G+ L  + A RVM    K G I       S  +   ++ VY +TK  +  L  
Sbjct: 121 VMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTT 179

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 289
           SL  E     + V+  SP +V + LL     + + ++  +  +        L   
Sbjct: 180 SLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE 234

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  116 bits (292), Expect = 3e-30
 Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 23/206 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +ITG+  G+G   +R    +G RVV+A      +      +           G      
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----------GR----- 57

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 174
                      D+     V+ L +F ++ FG +DI  NNA  ++     + Q T +  + 
Sbjct: 58  ----GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDD 113

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 234
             + N  G++L  + A+  +     GG I N+  + +  ++  ++  Y  TK  +  L  
Sbjct: 114 TFTVNARGTMLMCKYAIPRLISA-GGGAIVNI-SSATAHAAYDMSTAYACTKAAIETLTR 171

Query: 235 SLFKESKRSKVGVHTASPGMVLTDLL 260
            +  +  R  V  +  +PG+V T  L
Sbjct: 172 YVATQYGRHGVRCNAIAPGLVRTPRL 197

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  115 bits (290), Expect = 5e-30
 Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 30/209 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + VVITG++ G+G+A+AR F   G  +++ +R  E        L+  L            
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE-------RLKA-LNLP--------- 59

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                        DV +          A   +G  D  +NNAG       +      E +
Sbjct: 60  ------NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQ 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
           ++   N++G +   +  +  M+ +   G I N+    S  G  + P  A Y  TK  +  
Sbjct: 113 RMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINI---SSIAGKKTFPDHAAYCGTKFAVHA 168

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLL 260
           +  ++ +E   S V V T +P  V T+LL
Sbjct: 169 ISENVREEVAASNVRVMTIAPSAVKTELL 197

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  114 bits (289), Expect = 6e-30
 Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 28/236 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  VITG   G+G+A+A  F + G  + +A             +           G    
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIR--------NLGR--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  + CDV +P DV+      ++ FG  DI +NNAG      P  + T E+ +
Sbjct: 55  ------RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWK 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +    N+    L  +  +  M+     G I N+  + +          Y STK       
Sbjct: 108 KTFEINVDSGFLMAKAFVPGMKRN-GWGRIINL-TSTTYWLKIEAYTHYISTKAANIGFT 165

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE------LPETVA 283
            +L  +  +  + V+  +P +V T    + +      +   + +      +P  + 
Sbjct: 166 RALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLT 221

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  114 bits (287), Expect = 8e-30
 Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 33/207 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
            N ++TG ++G+GKA+    L + +  V+     +                  +      
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ------------------SFSA--- 43

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +  I  D+ +  D+  +    + +  S D    NAG       +     E I+
Sbjct: 44  -----ENLKFIKADLTKQQDITNV--LDIIKNVSFDGIFLNAGILI-KGSIFDIDIESIK 95

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  N+  SI   +     ++    G  I    G+     + P +  Y  +K  + Q+ 
Sbjct: 96  KVLDLNVWSSIYFIKGLENNLK---VGASIVFN-GSDQCFIAKPNSFAYTLSKGAIAQMT 151

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            SL  +  + ++ V+T  PG V TDL 
Sbjct: 152 KSLALDLAKYQIRVNTVCPGTVDTDLY 178

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  114 bits (288), Expect = 9e-30
 Identities = 37/220 (16%), Positives = 78/220 (35%), Gaps = 33/220 (15%)

Query: 42  NMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL 101
           N+  + H       ++ITG+++ +G   A   L  G RV+++ R+  +   +VTEL +  
Sbjct: 16  NLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA---SVTELRQ-- 70

Query: 102 KEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF 161
                            A    +  D      +    +    +  S+   ++NA      
Sbjct: 71  -----------------AGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEW--L 111

Query: 162 KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTA 220
                   +   ++ S +++   L       ++    +   I ++ D     G  +    
Sbjct: 112 AETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADIVHISDDVTRKG--SSKHI 168

Query: 221 VYGSTKCGLRQLQASLFKE-SKRSKV-GVHTASPGMVLTD 258
            Y +TK GL  L  S     +   KV G+   +P +++  
Sbjct: 169 AYCATKAGLESLTLSFAARFAPLVKVNGI---APALLMFQ 205

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  114 bits (288), Expect = 1e-29
 Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 23/205 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG   G+G+A A  F  +G  VVVA  + ++      E+           G      
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----------GS----- 73

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               K  G+  DV    D + +      ++G +D+ +NNAG       ++    E  ++I
Sbjct: 74  ----KAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEETWDRI 128

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +S N+ G  LC++  + VMR    GG I N   + +  S+      Y ++K  +  L  +
Sbjct: 129 MSVNVKGIFLCSKYVIPVMRRN-GGGSIINT-TSYTATSAIADRTAYVASKGAISSLTRA 186

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           +  +  +  + V+  +PG + +   
Sbjct: 187 MAMDHAKEGIRVNAVAPGTIDSPYF 211

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  113 bits (285), Expect = 2e-29
 Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 17/206 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R +++TG++ G+G+  A  +   G  V++  R+ E +R   + +            G   
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN--------EETGRQ- 63

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +    C   + Q+L+      +  +D  ++NAG      P+ +   +  +
Sbjct: 64  -----PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQ 118

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++  N+  + + T+  + ++     G  +F     G  G        Y ++K     + 
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR--ANWGAYAASKFATEGMM 176

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
             L  E +  ++ V+  +PG   T +
Sbjct: 177 QVLADEYQ-QRLRVNCINPGGTRTAM 201

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  112 bits (284), Expect = 3e-29
 Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 27/235 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ +G+GKA+A      G  V+V+  ++E  +     +           G    
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----------GK--- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   IA D+ +P  V+ L        G IDI +NNA     F        +   
Sbjct: 53  ------KARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWR 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +I+  NL G+ + TR     MR   K G + ++  + +  + TP  A Y + K G+    
Sbjct: 106 KIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISI-ASNTFFAGTPNMAAYVAAKGGVIGFT 164

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-----PETVA 283
            +L  E  +  +  +  +PG++ +D + +    +      ++  +     PE +A
Sbjct: 165 RALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIA 219

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  113 bits (284), Expect = 3e-29
 Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 39/237 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+  G+G A+      +G RV VA R+   +                       
Sbjct: 29  KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI----------------------- 65

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A    +  D+ E A    L        G +DI +NNAG       + + T+ +  
Sbjct: 66  -----AADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWS 119

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
             +  N+       R A+ +M     GG I N+  +  G    P  A+Y  TK  L  L 
Sbjct: 120 LSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNV-ASCWGLRPGPGHALYCLTKAALASLT 177

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 290
             +  +     + ++   P  V T +L        +  F      P+     L   +
Sbjct: 178 QCMGMDHAPQGIRINAVCPNEVNTPML--------RTGFAKRGFDPDRAVAELGRTV 226

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  113 bits (284), Expect = 3e-29
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 32/205 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG++ G+G+A+A  F+  G +V+  S                        G      
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP--------------------GE----- 45

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
              AK   I CDV  P  V+   +    E+GSI + +NNAG    +  +   +  E  +I
Sbjct: 46  ---AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRI 101

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL G    ++ A+  M    +   I N+  +      T   + Y ++K  +  L  S
Sbjct: 102 IDVNLFGYYYASKFAIPYMIRS-RDPSIVNI-SSVQASIITKNASAYVTSKHAVIGLTKS 159

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           +  +     +  +   P  + T L+
Sbjct: 160 IALDYAP-LLRCNAVCPATIDTPLV 183

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  112 bits (283), Expect = 5e-29
 Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 26/207 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++TG  RG+G+A+A+ F   G  V +     E   +              A      
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV--------------AEAI--- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   A    D+ +  +  +    A    G +D+ +NNA         L     E  
Sbjct: 50  ------GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWR 102

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL   +  +  A R MR    GG I N+  +  G  +    A Y ++K GL  L 
Sbjct: 103 RVLEVNLTAPMHLSALAAREMRKV-GGGAIVNV-ASVQGLFAEQENAAYNASKGGLVNLT 160

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            SL  +    ++ V+  +PG + T+ +
Sbjct: 161 RSLALDLAPLRIRVNAVAPGAIATEAV 187

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  112 bits (282), Expect = 1e-28
 Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 22/209 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSS 112
              ++TG  RG+G  +AR    SG  + +     +E V   + EL           G   
Sbjct: 30  PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS--------GLGA-- 79

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEE 171
                  +V  +  D+ + +  Q   +  V EFG ID  +NNAG  +      L    E 
Sbjct: 80  -------RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPEN 132

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
            + IV  NL G++  T+  ++ M          I N+  + S   ++P    Y  +K GL
Sbjct: 133 FDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINI-TSVSAVMTSPERLDYCMSKAGL 191

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTD 258
                 L      + + V    PG++ +D
Sbjct: 192 AAFSQGLALRLAETGIAVFEVRPGIIRSD 220

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  110 bits (278), Expect = 2e-28
 Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 32/229 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+VV+TG T+G+G+ +A  F  +G  V VA RS+  +   V +L++          G   
Sbjct: 11  RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ-------LGSG--- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV G+  DV + A    L+  AV EFG ID+   NAG      PL   T E++ 
Sbjct: 61  ------KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD-APLATMTPEQLN 113

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--PLT-----AVYGSTK 226
            I + N+ G+    +  +  +      G +          SS   P+T     + YG+TK
Sbjct: 114 GIFAVNVNGTFYAVQACLDALIAS-GSGRVVLT-------SSITGPITGYPGWSHYGATK 165

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 275
                   +   E    K+ V+   PG ++T+ LL         M   I
Sbjct: 166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSI 214

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  111 bits (279), Expect = 2e-28
 Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 32/211 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  V+TG+  G+G+A+A  +  +G  V+   R ++ V+    E+           GG   
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-TDGVKEVADEIA--------DGGG--- 79

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  D+ +      ++   +     +D+ +NNAG      P  + +     
Sbjct: 80  ------SAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIAR-APAEEVSLGRWR 131

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-----GGSSTPLTAVYGSTKCG 228
           ++++ NL  + + +R     M      G I  +    S     GG      A Y ++K  
Sbjct: 132 EVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVTI---ASMLSFQGG---RNVAAYAASKHA 184

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
           +  L  +L  E     VGV+  +PG V+T  
Sbjct: 185 VVGLTRALASEWAGRGVGVNALAPGYVVTAN 215

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  110 bits (277), Expect = 3e-28
 Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 34/211 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG   G+G  + +  L  G +V  +  +  + +    EL           G      
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----------GE----- 52

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +   +  DV   AD   +        G++++ +NNAG       +     E+  ++
Sbjct: 53  ----RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRL 107

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 234
           +  N     +  ++ +  M++   GG I NM   +          A Y ++K  +  L  
Sbjct: 108 LKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPI--EQYAGYSASKAAVSALTR 163

Query: 235 SLFKESKRSKVG-----VHTASPGMVLTDLL 260
           +     ++         +H   P  + T ++
Sbjct: 164 AAALSCRKQGYAIRVNSIH---PDGIYTPMM 191

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  110 bits (277), Expect = 4e-28
 Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 31/205 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG + G+G A+    +  G +VV  S   +S                          
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDH------------------- 57

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                      DV    +V++       ++G IDI +NNAG    + PL     E   +I
Sbjct: 58  --------FKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTEIWRRI 108

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  N+ GS L  +  + VM      G I N+  +    ++T   A Y ++K  L  L  S
Sbjct: 109 IDVNVNGSYLMAKYTIPVMLAI-GHGSIINI-ASVQSYAATKNAAAYVTSKHALLGLTRS 166

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           +  +    K+  +   PG ++T ++
Sbjct: 167 VAIDYAP-KIRCNAVCPGTIMTPMV 190

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  109 bits (275), Expect = 5e-28
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 29/207 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++T      G   A     +G  V     S +       ELE               
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK----QKDELEA-------------- 43

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                              +  +L     + +G +D+ ++N      F+P+ ++  E+  
Sbjct: 44  -----FAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYR 98

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
             V    +            M+ + K GHI  +    S          + Y S + G   
Sbjct: 99  GAVEALQIRPFALVNAVASQMKKR-KSGHIIFI---TSATPFGPWKELSTYTSARAGACT 154

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTD 258
           L  +L KE     + V    P  + ++
Sbjct: 155 LANALSKELGEYNIPVFAIGPNYLHSE 181

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  110 bits (276), Expect = 7e-28
 Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 22/209 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +   +TG + G+G A+AR     G  V   +R +++V   V  L         AAG    
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR--------AAGH--- 73

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V G +CDV    +V      AV  FG I I +N+AG N G        +    
Sbjct: 74  ------DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG-GETADLDDALWA 126

Query: 174 QIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            ++ TNL G    TRE +R   MR+    G I N+  +  G       A Y ++K G+  
Sbjct: 127 DVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVNI-ASTGGKQGVMYAAPYTASKHGVVG 184

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLL 260
              S+  E  ++ + V+   PG V T + 
Sbjct: 185 FTKSVGFELAKTGITVNAVCPGYVETPMA 213

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  108 bits (271), Expect = 2e-27
 Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 32/208 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + +++TG+  G+G+A    F   G  +V   R    +   V  LE               
Sbjct: 7   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--------------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A+   +  DV +P  V+ +   A+ EFG +    + AG             E  E
Sbjct: 52  -----AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWE 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGLR 230
           +++  NL GS L  R+A  V+    +GG +       G G+ G      A Y + K G+ 
Sbjct: 106 KVLRVNLTGSFLVARKAGEVLE---EGGSLVLTGSVAGLGAFGL-----AHYAAGKLGVV 157

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTD 258
            L  +L  E  R  V V+   PG++ T 
Sbjct: 158 GLARTLALELARKGVRVNVLLPGLIQTP 185

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  108 bits (271), Expect = 3e-27
 Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 28/212 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG +RG+G+ +A+  L +G RV + +R +E+   T T L          A G   
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS---------AYG--- 77

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     I  D+   A  ++L+         +DI +NNAGT+ G   L  +     E
Sbjct: 78  ------DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG-AALESYPVSGWE 130

Query: 174 QIVSTNLVGSILCTREAMRVMRDQP---KGGHIFN---MDGAGSGGSSTPLTAVYGSTKC 227
           +++  N+     C ++ + ++R          + N   + G  + G        YG +K 
Sbjct: 131 KVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAY---AYGPSKA 187

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
            L QL   L KE     + V+  +PG   + +
Sbjct: 188 ALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  106 bits (268), Expect = 8e-27
 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 34/213 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG+T G+G  +AR     G RV V +R  E +R T+ EL          AG    
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR--------EAGV--- 71

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +  G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E   
Sbjct: 72  ------EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWL 124

Query: 174 QIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSST------PLTAVYGST 225
            +V TNL G    T++ ++   M ++   G I N+       +ST         A Y ++
Sbjct: 125 DVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNI-------ASTGGKQGVVHAAPYSAS 176

Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 258
           K G+     +L  E  R+ + V+   PG V T 
Sbjct: 177 KHGVVGFTKALGLELARTGITVNAVCPGFVETP 209

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  106 bits (267), Expect = 8e-27
 Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 29/219 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 112
           +  ++TG++RG+G+A+A+     G  V +      E    TV E++        + GG  
Sbjct: 8   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ--------SNGG-- 57

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQ 166
                      I  ++     V+ L +   NE          DI INNAG       + +
Sbjct: 58  -------SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEE 109

Query: 167 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTK 226
            T +  +++VS N        ++A+  +RD      I N+  + +   S P    Y  TK
Sbjct: 110 TTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINI-SSAATRISLPDFIAYSMTK 165

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
             +  +  +L K+     + V+   PG V TD+     +
Sbjct: 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS 204

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  106 bits (268), Expect = 1e-26
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 32/229 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG T+G+G+ +A  F  +G  V VA+RS   +     EL E          G   
Sbjct: 42  RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE-------LGAG--- 91

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V G+  DV +P      +   V+ FG++D+   NAG       L   T E++ 
Sbjct: 92  ------NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLS 144

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--PLT-----AVYGSTK 226
           +++  N+ G++   +  +  +      G +          SS   P+T     + YG++K
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTAS-GRGRVILT-------SSITGPVTGYPGWSHYGASK 196

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 275
                   +   E     V V+   PG +LT+ L+         M   I
Sbjct: 197 AAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSI 245

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  104 bits (263), Expect = 2e-26
 Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 29/207 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG +RG+G+A+A   +  G RV +ASR+ E       E  ++L            
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE-------EAAQSL------------ 43

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  D+ E  D + L   A+   G + + ++ A  N   KP L+ + EE  
Sbjct: 44  ------GAVPLPTDL-EKDDPKGLVKRALEALGGLHVLVHAAAVNV-RKPALELSYEEWR 95

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 232
           +++  +L  + L  + A   M +    G +  +                Y + K  L  L
Sbjct: 96  RVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGL 154

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDL 259
             +L KE  R  + V+   PG V T+ 
Sbjct: 155 TRALAKEWARLGIRVNLLCPGYVETEF 181

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  104 bits (262), Expect = 4e-26
 Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 30/207 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +NV +TG+ +G+G A A  F+ +G +V    ++                           
Sbjct: 8   KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT------------------QEQY--- 46

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   A    DV + A V ++    + E   +D  +N AG  +      Q + E+ +
Sbjct: 47  ------PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQ 99

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           Q  + N+ G+    ++ M   R Q +GG I  +  + +  +     + YG++K  L+ L 
Sbjct: 100 QTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTV-ASDAAHTPRIGMSAYGASKAALKSLA 157

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            S+  E   S V  +  SPG   TD+ 
Sbjct: 158 LSVGLELAGSGVRCNVVSPGSTDTDMQ 184

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  104 bits (262), Expect = 5e-26
 Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 38/234 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 112
              VITG  R +G ++A      G RVVV    S  + +  V EL         A  G  
Sbjct: 12  PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA-------ARAG-- 62

Query: 113 KKNLVHAKVAGIACDVCEPADV----QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF- 167
                         D+   + +    + + + +   FG  D+ +NNA       PLL   
Sbjct: 63  -------SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGD 114

Query: 168 ----------TNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMDGAGSGG 213
                      + ++ ++  +N V  +   R   R   +      +   + N+       
Sbjct: 115 DTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL-CDAMTD 173

Query: 214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
              P   VY   K  L  L  +   E     + V+  +PG+ L    +   T +
Sbjct: 174 LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 227

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  102 bits (257), Expect = 3e-25
 Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 32/248 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA-------------SRSSESVRMTVTELEENLK 102
             ITG+ RG G+A A      G  ++                 S + +  TV  +E    
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE---- 69

Query: 103 EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 162
               AA           ++     D  +   ++K+ +  V   G +DI + NAG     +
Sbjct: 70  ----AANR---------RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA-APQ 115

Query: 163 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 222
                T E+   ++  N+ G+          + +  +GG I  +  + +G    P    Y
Sbjct: 116 AWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILI-SSAAGMKMQPFMIHY 174

Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 282
            ++K  +  L  +   E  +  + V++  PG V T +          Q      +L   +
Sbjct: 175 TASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVL 234

Query: 283 ARTLVPRI 290
              L   +
Sbjct: 235 TPFLPDWV 242

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  102 bits (256), Expect = 4e-25
 Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 23/209 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+ +IT  T+GLGK +  + L  G  V V   S            E +KE          
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT-------TAMETMKETYKDVEE--- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNE 170
                 ++  +  DV +  D+ K+   A++ FG ID  INNAG     +    L+ +  +
Sbjct: 58  ------RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKK--LVDYEED 109

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS-TPLTAVYGSTKCGL 229
           E  +++  NL       +  + VMR Q   G I N    G+  +      + + + K GL
Sbjct: 110 EWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAPGWIYRSAFAAAKVGL 168

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTD 258
             L  ++  E     +  +   PG ++ +
Sbjct: 169 VSLTKTVAYEEAEYGITANMVCPGDIIGE 197

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  101 bits (254), Expect = 4e-25
 Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 28/207 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + +++T + +G+G+A A  F   G +V+    +   ++                      
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---------------- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +     DV +   + +      NE   +D+  N AG       +L    ++ +
Sbjct: 51  ------GIQTRVLDVTKKKQIDQ----FANEVERLDVLFNVAGFVH-HGTVLDCEEKDWD 99

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
             ++ N+    L  +  +  M  Q K G+I NM    S         VY +TK  +  L 
Sbjct: 100 FSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLT 158

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            S+  +  +  +  +   PG V T  L
Sbjct: 159 KSVAADFIQQGIRCNCVCPGTVDTPSL 185

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  102 bits (257), Expect = 5e-25
 Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 35/219 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV--RMTVTELEENLKEGMMAAGGS 111
           R  ++TG   G+G+A A  +   G  V +    +E    +     +E          G  
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE--------ECGR- 100

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                   K   +  D+ + +  + L + A    G +DI    AG       +   T+E+
Sbjct: 101 --------KAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQ 152

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS------TPLTAVYGST 225
            +Q  + N+      T+EA+ ++   PKG  I          SS      +P    Y +T
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLL---PKGASIITT-------SSIQAYQPSPHLLDYAAT 202

Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS 264
           K  +      L K+     + V+  +PG + T L +SG 
Sbjct: 203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG 241

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  102 bits (256), Expect = 5e-25
 Identities = 54/255 (21%), Positives = 95/255 (37%), Gaps = 41/255 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA-------------SRSSESVRMTVTELEENLK 102
             ITG+ RG G++ A      G  ++                 S E +  T   +E    
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE---- 73

Query: 103 EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 162
                 G          K      DV + A +++L    + +FG +D+ + NAG    + 
Sbjct: 74  ----DQGR---------KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WG 119

Query: 163 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 222
            + + T+E+ + ++  NL G+    R  +  M +   GG I  +  + +G  +TP    Y
Sbjct: 120 RVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVV-SSSAGLKATPGNGHY 178

Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 282
            ++K GL  L  +L  E     + V++  P  V T +      I+ + M  I    P  V
Sbjct: 179 SASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM------IEPEAMMEIFARHPSFV 232

Query: 283 ---ARTLVPRIRVVK 294
                  V     + 
Sbjct: 233 HSFPPMPVQPNGFMT 247

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  100 bits (252), Expect = 8e-25
 Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 34/209 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG+  G+G+A    F   G R+V        +R     +                
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---------------- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                     +  DV +PA V++    A+   G +D  ++ AG T   F    +   E+ 
Sbjct: 50  ------GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNF--HWKMPLEDW 101

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGL 229
           E ++  NL GS L  + A   MR++   G I         G+ G      A Y ++  G+
Sbjct: 102 ELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRVYLGNLGQ-----ANYAASMAGV 155

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTD 258
             L  +L  E  R  + V+T +PG + T 
Sbjct: 156 VGLTRTLALELGRWGIRVNTLAPGFIETR 184

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  101 bits (253), Expect = 1e-24
 Identities = 42/228 (18%), Positives = 83/228 (36%), Gaps = 34/228 (14%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA----------------SRSSESVRMTVTELEE 99
             +TG+ RG G++ A      G  ++                  + + E +  T   ++ 
Sbjct: 14  AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK- 72

Query: 100 NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 159
                               ++     DV +   ++   +  V + G +DI + NAG   
Sbjct: 73  -------GHNR---------RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN 116

Query: 160 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT 219
           G   L + + E+  +++  NL G     +  +  M    +GG I     +  G  + P T
Sbjct: 117 GGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT-SSVGGLKAYPHT 175

Query: 220 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
             Y + K G+  L  +   E  +  + V++  P  V T +L +  T +
Sbjct: 176 GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFK 223

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  100 bits (251), Expect = 2e-24
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 14/155 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG+  G+G+A++      G  V        + + TV  L     +     G    
Sbjct: 8   ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG---- 63

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSI-DIWINNAG-TNKGFKPLLQFTNEE 171
                   A    DV E    + L       F     + ++ AG T   F  LL  + ++
Sbjct: 64  ------NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDD 115

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
            +++++ NL G+ L T+ A + +      G I N+
Sbjct: 116 WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINI 150

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  100 bits (251), Expect = 2e-24
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 21/154 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ RG+G+ +A+    S   V+  SR+ +S    V E++        + G    
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK--------SFGY--- 93

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                 + +G A DV +  ++ ++ N  + E  ++DI +NNAG T       L+  N+E 
Sbjct: 94  ------ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNL--FLRMKNDEW 145

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           E ++ TNL      T+   + M +  + G I N+
Sbjct: 146 EDVLRTNLNSLFYITQPISKRMINN-RYGRIINI 178

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 98.6 bits (246), Expect = 4e-24
 Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 31/208 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V++ G    LG    + F      V               E                 
Sbjct: 8   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------EEAS-------------- 46

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                + +  +     E AD        +     +D  +  AG   G     +   +  +
Sbjct: 47  ----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCD 102

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            +   ++  S + +  A + ++   +GG +    GA +    TP    YG  K  + QL 
Sbjct: 103 LMWKQSIWTSTISSHLATKHLK---EGGLLTLA-GAKAALDGTPGMIGYGMAKGAVHQLC 158

Query: 234 ASLFKESKRSKVG--VHTASPGMVLTDL 259
            SL  ++     G       P  + T +
Sbjct: 159 QSLAGKNSGMPSGAAAIAVLPVTLDTPM 186

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 99.6 bits (249), Expect = 5e-24
 Identities = 41/229 (17%), Positives = 77/229 (33%), Gaps = 38/229 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSS 112
              V+TG+ + +G+A+A +   +G RVV+   +S E+      EL +             
Sbjct: 24  PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK-------ERSN-- 74

Query: 113 KKNLVHAKVAGIACDVCE----PADVQKLSNFAVNEFGSIDIWINNAGTNKGF------- 161
                         D+      PA  +++ N     FG  D+ +NNA             
Sbjct: 75  -------TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDH 127

Query: 162 --KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGSGG 213
                 +    ++ +++ TN +   L T    +  +            I N+ D      
Sbjct: 128 EDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187

Query: 214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 262
                 ++Y   K  L  L  S   E     + V+  +PG+ L  + + 
Sbjct: 188 --CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 234

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 97.0 bits (242), Expect = 1e-23
 Identities = 32/210 (15%), Positives = 61/210 (29%), Gaps = 35/210 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             V++ G    LG A+   F  +G  V+    S+                          
Sbjct: 4   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND------------------------ 39

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNE--FGSIDIWINNAGTNKGFKPLLQFTNEE 171
                     +  +       Q +     +      +D     AG   G     +   + 
Sbjct: 40  ---QADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKN 96

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            + ++  ++  S +  + A   ++    GG +    GA +    TP    YG  K  +  
Sbjct: 97  ADLMIKQSVWSSAIAAKLATTHLK---PGGLLQLT-GAAAAMGPTPSMIGYGMAKAAVHH 152

Query: 232 LQASLFKESKRSKVG--VHTASPGMVLTDL 259
           L +SL  +         V T  P  + T +
Sbjct: 153 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 96.2 bits (240), Expect = 1e-23
 Identities = 34/206 (16%), Positives = 62/206 (30%), Gaps = 45/206 (21%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             +++ G++  LG A+    L     V+ A R S  V                       
Sbjct: 4   MKILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVT---------------------- 40

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                        D+     ++K+      + G +D  ++  G+   F PL + T E+  
Sbjct: 41  ------------VDITNIDSIKKM----YEQVGKVDAIVSATGSAT-FSPLTELTPEKNA 83

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
             +S+ L G I      +  + D    G      G           A        +    
Sbjct: 84  VTISSKLGGQINLVLLGIDSLND---KGSFTLTTGI-MMEDPIVQGASAAMANGAVTAFA 139

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            S   E  R  + ++T SP ++    
Sbjct: 140 KSAAIEMPR-GIRINTVSPNVLEESW 164

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 96.8 bits (242), Expect = 2e-23
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 18/151 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VV+TG++RG+GKA+A     +G +V+V    S        +  E + + + A GG     
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSA-------KAAEEVSKQIEAYGG----- 51

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +      DV + ADV+ +   A++ +G+ID+ +NNAG  +    L++    + +++
Sbjct: 52  ----QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD-TLLIRMKKSQWDEV 106

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           +  NL G  LCT+ A ++M  + + G I N+
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKK-RKGRIINI 136

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 96.8 bits (242), Expect = 2e-23
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 20/154 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGS+RGLGKA+A +    G  +V+    +           +   E   AAG    
Sbjct: 6   KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAS-------TSLDATAEEFKAAGI--- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                  V     DV  P DV+ +   A++ FG IDI +NNAG T      +L+ + ++ 
Sbjct: 56  ------NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDW 107

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           + +++TNL  + LCT+   ++M  Q K G I N+
Sbjct: 108 DDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINI 140

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 97.2 bits (243), Expect = 2e-23
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 21/154 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G+A+A E    G  V+  + +           +         AG    
Sbjct: 29  QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK--------QAGL--- 77

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                 +  G   +V +   V  L    + EFG++++ +NNAG T       ++  ++E 
Sbjct: 78  ------EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQL--AMRMKDDEW 129

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           + ++ TNL      +R  +R M    +GG I N+
Sbjct: 130 DAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNI 162

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 97.7 bits (244), Expect = 2e-23
 Identities = 45/224 (20%), Positives = 82/224 (36%), Gaps = 30/224 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKE 103
             ITG+ RG G++ A      G  ++                + + +  TV ++E     
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE----- 85

Query: 104 GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 163
              A G          ++     DV +   +Q   +  V + G +DI + NA        
Sbjct: 86  ---ALGR---------RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTR 133

Query: 164 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYG 223
           L +   +    ++  NL G+ +  R A+  +    +GG I     +  G         Y 
Sbjct: 134 LNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFT-SSIGGLRGAENIGNYI 192

Query: 224 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
           ++K GL  L  ++  E     + V+   P  V T +LL+  T +
Sbjct: 193 ASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYR 236

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 97.2 bits (243), Expect = 3e-23
 Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 18/153 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG++RG+G+A+A E   +G +V V   SS           + +   + AAGG   
Sbjct: 29  RIALVTGASRGIGRAIALELAAAGAKVAVNYASSA-------GAADEVVAAIAAAGG--- 78

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +  DV + ++V+ L    +  +G +D+ +NNAG  +    LL+   ++ +
Sbjct: 79  ------EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD-TLLLRMKRDDWQ 131

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
            ++  NL G  LC+R A ++M  Q + G I N+
Sbjct: 132 SVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINI 163

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 96.6 bits (241), Expect = 3e-23
 Identities = 45/272 (16%), Positives = 89/272 (32%), Gaps = 53/272 (19%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVV--ASRSSESVRMTVTELEENLKEGMMAAGG 110
           P +VV+TG+ RG+G  L ++ +   +   +   +R  E      TEL+            
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----ATELKS----------- 47

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFT 168
                +  ++V  +   V     +    +      G   + + INNAG    +    +  
Sbjct: 48  -----IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPN 102

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMR----------DQPKGGHIFNMD-GAGS-----G 212
              I + +  N    +L T++ + +++                 +  +  G GS      
Sbjct: 103 RAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS 162

Query: 213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 272
           GS+      Y  +K  +     +L  + K   V V    PG V T+L    + +      
Sbjct: 163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALT----- 217

Query: 273 NIICELPETVARTLVPRIRVVKG--SGKAINY 302
                  E     L+     +    +G+    
Sbjct: 218 ------VEQSTAELISSFNKLDNSHNGRFFMR 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 96.0 bits (240), Expect = 4e-23
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TGSTRG+G+A+A +   +G  V++   S E         +   +E     G    
Sbjct: 8   KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGE-------RAKAVAEEIANKYGV--- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                 K  G+  ++     + K      N    IDI +NNAG T       L+ +  + 
Sbjct: 58  ------KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL--FLRMSLLDW 109

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           E+++  NL G+ L T+ ++R M  Q + G I N+
Sbjct: 110 EEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNI 142

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 95.5 bits (238), Expect = 8e-23
 Identities = 45/223 (20%), Positives = 76/223 (34%), Gaps = 35/223 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 110
            +++ITG  RGLG  L +  L        +    R+ E       ELE+  K        
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA----KELEDLAKN------- 70

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFT 168
                  H+ +  +  D+       KL            +++  NNAG       +    
Sbjct: 71  -------HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVR 123

Query: 169 NEEIEQIVSTNLVGSILCTR----------EAMRVMRDQPKGGHIFNMD-GAGS-GGSST 216
           ++E+   + TN V  I+  +          +A            I NM    GS  G++ 
Sbjct: 124 SQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD 183

Query: 217 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
                Y ++K  L     SL  +    ++   +  PG V TD+
Sbjct: 184 GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 226

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 94.8 bits (237), Expect = 9e-23
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G+A+A +    G  VVV    +E       +    + + +   G    
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE-------QKANEVVDEIKKLGS--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV    DV  +    V+ FG +DI +NNAG  K    L++   EE +
Sbjct: 55  ------DAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWD 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
            +++TNL G  LCT+   R M  Q + G I N+
Sbjct: 108 TVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNI 139

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 21/154 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G  +A      G  VV  + S  S       ++          G    
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK--------EKGF--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                 K  G+  ++ +   +Q        E  +IDI +NNAG T      +++ + +E 
Sbjct: 55  ------KARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNL--MMRMSEDEW 106

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           + +++TNL      ++E +R M  + + G I ++
Sbjct: 107 QSVINTNLSSIFRMSKECVRGMMKK-RWGRIISI 139

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 94.5 bits (236), Expect = 1e-22
 Identities = 47/207 (22%), Positives = 77/207 (37%), Gaps = 23/207 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R   +TG   G+G ++ +     G RVV     +               E   A G    
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS-------PRRVKWLEDQKALGF--- 63

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                        +V +    ++  +    E G ID+ +NNAG  +      + T E+ +
Sbjct: 64  ------DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRD-VVFRKMTREDWQ 116

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 231
            ++ TNL      T++ +  M ++   G I N+    S  G         Y + K G+  
Sbjct: 117 AVIDTNLTSLFNVTKQVIDGMVER-GWGRIINI---SSVNGQKGQFGQTNYSTAKAGIHG 172

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTD 258
              SL +E     V V+T SPG + TD
Sbjct: 173 FTMSLAQEVATKGVTVNTVSPGYIGTD 199

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 95.5 bits (238), Expect = 2e-22
 Identities = 37/236 (15%), Positives = 70/236 (29%), Gaps = 25/236 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGS- 111
              ++TG+ + LG+++A      G  V +   RS+         L        +      
Sbjct: 10  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 69

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
           S         A  +  V       +L       +G  D+ +NNA +     PLL+   + 
Sbjct: 70  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDG 128

Query: 172 --------------IEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGS 211
                            +  +N +      +     +   P         I NM D   +
Sbjct: 129 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 188

Query: 212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
                    +Y   K  L  L  S   E    ++ V+   PG+ +    +  +  +
Sbjct: 189 QP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWE 242

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 94.5 bits (236), Expect = 2e-22
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 20/154 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           ++ ++TG++RG+G+++A +    G  V V    S+       E  E + E + A G    
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK-------EKAEAVVEEIKAKGV--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                     I  +V +  +V+ +    V++FGS+D+ +NNAG T      L++   +E 
Sbjct: 55  ------DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEW 106

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           + ++ TNL G   C ++A   M  Q + G I N+
Sbjct: 107 DDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINL 139

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 94.1 bits (235), Expect = 2e-22
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 19/154 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  +ITG++RG+G+A+A      G  + +    +        E  E + E     G    
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNR-------EKAEEVAEEARRRGSPL- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                  VA +  ++ E      L + A    G +D  +NNAG T      L++  +E+ 
Sbjct: 54  -------VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTL--LVRMKDEDW 104

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           E ++  NL      TREA+++M    + G I N+
Sbjct: 105 EAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNI 137

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 95.6 bits (238), Expect = 3e-22
 Identities = 37/226 (16%), Positives = 67/226 (29%), Gaps = 25/226 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGS- 111
              ++TG+ + LG+++A      G  V +   RS+         L        +      
Sbjct: 47  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 106

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
           S         A  +  V       +L       +G  D+ +NNA +     PLL+   + 
Sbjct: 107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDG 165

Query: 172 --------------IEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGS 211
                            +  +N +      +     +   P         I NM D   +
Sbjct: 166 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 225

Query: 212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 257
                    +Y   K  L  L  S   E    ++ V+   PG+ + 
Sbjct: 226 QP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 94.8 bits (236), Expect = 5e-22
 Identities = 45/213 (21%), Positives = 73/213 (34%), Gaps = 28/213 (13%)

Query: 52  GPRNVVITGSTRGLGKALAREFL---LSGDRVVVASRSSESVRMTVTELEENLKEGMMAA 108
               V+ITG + G+G  LA           +V    R  +    T   L E  +      
Sbjct: 1   ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK----TQGRLWEAARALACPP 56

Query: 109 GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNE--FGSIDIWINNAGTNKG-FKPLL 165
           G           +  +  DV +   V      A      G +D+ + NAG   G   PL 
Sbjct: 57  GS----------LETLQLDVRDSKSVAA----ARERVTEGRVDVLVCNAGL--GLLGPLE 100

Query: 166 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 225
               + +  ++  N+VG++   +  +  M+ +   G +    G+  G    P   VY ++
Sbjct: 101 ALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVT-GSVGGLMGLPFNDVYCAS 158

Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 258
           K  L  L  SL        V +     G V T 
Sbjct: 159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 93.4 bits (233), Expect = 5e-22
 Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 25/208 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R   +TG   GLG A++R    +G  V V+            +           AG    
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN-------DHVSTWLMHERDAGR--- 75

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                      A DV +    ++ +   + +FG +D+ INNAG T       ++ T  + 
Sbjct: 76  ------DFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDAT--FMKMTKGDW 127

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 230
           + ++ T+L      T++ +  M ++ + G I N+   GS  G       A Y S K G+ 
Sbjct: 128 DAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNI---GSVNGSRGAFGQANYASAKAGIH 183

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTD 258
               +L  E+ +  + V+T SPG + T 
Sbjct: 184 GFTKTLALETAKRGITVNTVSPGYLATA 211

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 92.9 bits (232), Expect = 5e-22
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 24/154 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+GKA+A      G +V+  + S    +     L +              
Sbjct: 10  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-------------- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                    G+A +V  P  ++ +     +EFG +DI +NNAG T      L++   EE 
Sbjct: 56  ------NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEW 107

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
             I+ TNL      ++  +R M  + + G I N+
Sbjct: 108 SDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINV 140

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 93.0 bits (232), Expect = 5e-22
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 39/207 (18%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++  ++RG+G+A+A      G  V + +R+           EE LK           
Sbjct: 20  KGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----------EELLKR---------- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                +    + CD+ +  D+         +   +DI + NAG  K      + TNE+ +
Sbjct: 59  -----SGHRYVVCDLRKDLDL------LFEKVKEVDILVLNAGGPKA-GFFDELTNEDFK 106

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 231
           + + +  +  I   R  +  M+++   G I  +    S    +P+       S +  L  
Sbjct: 107 EAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAI---TSFSVISPIENLYTSNSARMALTG 162

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTD 258
              +L  E     + V+  +PG   T+
Sbjct: 163 FLKTLSFEVAPYGITVNCVAPGWTETE 189

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 92.6 bits (231), Expect = 8e-22
 Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 37/208 (17%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG  RG+G A+A+     G +V V  R S +                        
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                  + G+  DV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 53  -----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 105

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 230
           E++++ NL G+    + A R M+   K G +  +   GS  G       A Y ++K G+ 
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRN-KFGRMIFI---GSVSGLWGIGNQANYAASKAGVI 161

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTD 258
            +  S+ +E  ++ V  +  +PG + TD
Sbjct: 162 GMARSIARELSKANVTANVVAPGYIDTD 189

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 92.6 bits (231), Expect = 8e-22
 Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 37/208 (17%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG  RG+G A+AR F  +GD+V +  RS E                         
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------------- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                     + CD+ +   V++         G +++ I NAG T      L++ + E+ 
Sbjct: 59  -----EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDF 111

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 230
             +V TNL G+    + A R M    K G +  +    S  G   +   A Y ++K GL 
Sbjct: 112 TSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLI---SSVVGLLGSAGQANYAASKAGLV 167

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTD 258
               SL +E     +  +  +PG V TD
Sbjct: 168 GFARSLARELGSRNITFNVVAPGFVDTD 195

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 92.3 bits (230), Expect = 1e-21
 Identities = 43/220 (19%), Positives = 76/220 (34%), Gaps = 37/220 (16%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKE 103
             ITG+ RG G+A A      G  ++                + E +  TV  +E     
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE----- 70

Query: 104 GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 163
                G          ++     DV +   +       ++E G +DI + NAG       
Sbjct: 71  ---DIGS---------RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP---- 114

Query: 164 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM---DGAGSGGSSTPLTA 220
            +   ++    ++  NL G     + A+  +  Q  GG I  +    G    GS+ P + 
Sbjct: 115 -MSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSV 173

Query: 221 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
            Y + K G+  L            + V++  P  V T ++
Sbjct: 174 GYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 91.4 bits (228), Expect = 3e-21
 Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 24/154 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG+T G+G+A+AR F   G  V +     + ++    +L +              
Sbjct: 28  RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGK-------------- 73

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 172
                  V   + ++ +   +++L+  A  E   IDI +NNAG T  G    ++  +++ 
Sbjct: 74  ------DVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGL--FVRMQDQDW 125

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           + +++ NL  +   TRE +  M  + + G I N+
Sbjct: 126 DDVLAVNLTAASTLTRELIHSMMRR-RYGRIINI 158

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 90.4 bits (225), Expect = 6e-21
 Identities = 53/244 (21%), Positives = 81/244 (33%), Gaps = 51/244 (20%)

Query: 36  GTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT 95
           G M  A   ++          VITG   GLG A A   +  G   V+    +        
Sbjct: 1   GHMAAACRSVKG------LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK 54

Query: 96  ELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 155
           +L           G                 DV    DVQ     A  +FG +D+ +N A
Sbjct: 55  KL-----------GN---------NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 94

Query: 156 GTNKGFKPLLQ-----FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFN 205
           G     K          T E+ ++++  NL+G+    R     M           G I N
Sbjct: 95  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 154

Query: 206 M------DG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 258
                  +G  G         A Y ++K G+  +   + ++     + V T +PG+  T 
Sbjct: 155 TASVAAFEGQVGQ--------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 206

Query: 259 LLLS 262
           LL S
Sbjct: 207 LLTS 210

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 91.2 bits (227), Expect = 6e-21
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 43/230 (18%)

Query: 56  VVITGSTRGLGKA----LARE--------FLLSGDRVVVASRSSESVRMTVTELEENLKE 103
             ITG+ RG G+     LA++               +  A  S E ++ TV  +E     
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE----- 103

Query: 104 GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 163
                G          ++     DV + A +Q + + A+ EFG IDI ++N G +     
Sbjct: 104 ---EQGR---------RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN-QGE 150

Query: 164 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------P 217
           ++  T+++   I+ TNL+G+    R  +  M ++ +GG +  +       SST      P
Sbjct: 151 VVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFV-------SSTVGLRGAP 203

Query: 218 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
             + Y ++K G++ L  SL  E  R  + V++ +PG V T++ L+   ++
Sbjct: 204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLK 253

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 90.4 bits (225), Expect = 7e-21
 Identities = 33/218 (15%), Positives = 66/218 (30%), Gaps = 38/218 (17%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            +++G   GLG+A  R     G  VV+A  ++E  +    EL           G      
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----------GN----- 76

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEE 171
               +   ++ +V     V      A          + + G     + +           
Sbjct: 77  ----RAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGG 132

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPK-----GGHIFNMDG----AGSGGSSTPLTAVY 222
             + +   L G+    R     +           G +          G  G        Y
Sbjct: 133 FTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ-----TAY 187

Query: 223 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
            + K G+  L  +  ++   + + V+T +PG + T ++
Sbjct: 188 AAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIM 225

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 92.9 bits (231), Expect = 1e-20
 Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 32/209 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEG 104
           R  V+TG+  GLG+  A  F   G +VVV            S  +  + V E+       
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR------ 73

Query: 105 MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL 164
              AGG         +       V    D  K+   A+  FG +DI +NNAG  +  + L
Sbjct: 74  --KAGG---------EAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRD-RSL 118

Query: 165 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGS 224
           ++ + ++   +   +L GS  CT+ A   M+ Q  G  I     +G  G+       Y +
Sbjct: 119 VKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN--FGQVNYTA 176

Query: 225 TKCGLRQLQASLFKESKRSKVGVHTASPG 253
            K GL  L  ++  E  R+ V  +   P 
Sbjct: 177 AKMGLIGLANTVAIEGARNNVLCNVIVPT 205

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 92.1 bits (229), Expect = 2e-20
 Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 34/210 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEG 104
           + V+ITG+  GLGK  + EF   G +VVV            +S++  + V E+       
Sbjct: 9   KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV------ 62

Query: 105 MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL 164
               GG +  +           +V    D  K+   AV  FG++ + INNAG  +    +
Sbjct: 63  --KNGGVAVAD---------YNNV---LDGDKIVETAVKNFGTVHVIINNAGILRD-ASM 107

Query: 165 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYG 223
            + T ++ + ++  +L G+   T+ A    + Q K G I N    AG  G+     A Y 
Sbjct: 108 KKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSSPAGLYGN--FGQANYA 164

Query: 224 STKCGLRQLQASLFKESKRSKVGVHTASPG 253
           S K  L     +L KE  +  +  +  +P 
Sbjct: 165 SAKSALLGFAETLAKEGAKYNIKANAIAPL 194

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 84.8 bits (210), Expect = 5e-18
 Identities = 52/237 (21%), Positives = 100/237 (42%), Gaps = 24/237 (10%)

Query: 17  GDSQMNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLS 76
             +Q   ++            +   +           + V+ITG+  GLGK  A+ F   
Sbjct: 286 LKNQYPFMLNDYATLTNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKY 345

Query: 77  GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK 136
           G +VVV      +   TV E++        AAGG         +      DV +  D + 
Sbjct: 346 GAKVVVNDFKDATK--TVDEIK--------AAGG---------EAWPDQHDVAK--DSEA 384

Query: 137 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD 196
           +    ++++G+IDI +NNAG  +  +   + + +E + +   +L+G+   +R A     +
Sbjct: 385 IIKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVE 443

Query: 197 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG 253
           + + G I N+  + SG       A Y S+K G+  L  ++  E  ++ + V+  +P 
Sbjct: 444 K-QFGRIINI-TSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 89.1 bits (222), Expect = 2e-20
 Identities = 46/226 (20%), Positives = 84/226 (37%), Gaps = 34/226 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSS 112
           +NV+ITG   G+G+A++  F   G  + +A    E     T   +E          G   
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE--------KEGV-- 97

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  K   +  D+ +    + +    V + GS++I +NN       + L   T E++
Sbjct: 98  -------KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL 150

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS------TPLTAVYGSTK 226
           E+    N+      T+ A+  +    +G  I N        +S            Y +TK
Sbjct: 151 EKTFRINIFSYFHVTKAALSHL---KQGDVIINT-------ASIVAYEGNETLIDYSATK 200

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 272
             +     SL +   +  + V+  +PG + T L+ S    +    F
Sbjct: 201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF 246

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 89.3 bits (222), Expect = 3e-20
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 32/209 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEG 104
           R V++TG+  GLG+A A  F   G  VVV           + S +    V E+       
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR------ 63

Query: 105 MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL 164
               GG +  N            V      +KL   A++ FG ID+ +NNAG  +  +  
Sbjct: 64  --RRGGKAVAN---------YDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRD-RSF 108

Query: 165 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGS 224
            + ++E+ + I   +L GS   TR A   M+ Q  G  I     +G  G+     A Y +
Sbjct: 109 SRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN--FGQANYSA 166

Query: 225 TKCGLRQLQASLFKESKRSKVGVHTASPG 253
            K GL  L  +L  E +++ +  +T +P 
Sbjct: 167 AKLGLLGLANTLVIEGRKNNIHCNTIAPN 195

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 87.7 bits (218), Expect = 5e-20
 Identities = 55/222 (24%), Positives = 80/222 (36%), Gaps = 43/222 (19%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG++ GLG A+ R     G  V+       +      EL           G      
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----------GA----- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNEEI 172
                V     DV   AD      FA  EFG +   +N AGT  G K L +      +  
Sbjct: 54  ----AVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSF 109

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM------DG-AGSGGSSTPLTA 220
            + V+ NL+G+    R A  VM         + G I N       DG  G         A
Sbjct: 110 ARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ--------A 161

Query: 221 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            Y ++K G+  L     +E  R  + V T +PG+  T ++  
Sbjct: 162 AYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG 203

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 89.0 bits (221), Expect = 5e-20
 Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 40/248 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVV----------ASRSSESVRMTVTELEENLKE 103
           R V++TG+  G+G+A A  F   G RVVV           +    + +  V E+      
Sbjct: 28  RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT----- 82

Query: 104 GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 163
              AAGG         +      +V +      L   AV  FG +D+ +NNAG  +  + 
Sbjct: 83  ---AAGG---------EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD-RM 129

Query: 164 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIFNMD-GAGSGGSSTP 217
           +   + EE + +++ +L G     R A    R          G I N   GAG  GS   
Sbjct: 130 IANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS--V 187

Query: 218 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV--LTDLLLSGSTIQNKQMFNII 275
               Y + K G+  L      E  R  V V+  +P     +T+ + +       Q F+ +
Sbjct: 188 GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAM 247

Query: 276 CELPETVA 283
              PE V+
Sbjct: 248 --APENVS 253

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 86.4 bits (215), Expect = 1e-19
 Identities = 28/153 (18%), Positives = 68/153 (44%), Gaps = 26/153 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG++ G+G A+AR     G +V+++  + E ++     L++              
Sbjct: 15  KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD-------------- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                       C++    +   L    +++  ++DI + NAG        ++  +++ +
Sbjct: 61  ------NYTIEVCNLANKEECSNL----ISKTSNLDILVCNAGITSD-TLAIRMKDQDFD 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           +++  NL  + +  REA++ M  + + G I N+
Sbjct: 110 KVIDINLKANFILNREAIKKMIQK-RYGRIINI 141

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 86.9 bits (216), Expect = 1e-19
 Identities = 46/232 (19%), Positives = 72/232 (31%), Gaps = 45/232 (19%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKE 103
           V++TG  RG G++ A +    G  +++               +S  +     E+E     
Sbjct: 13  VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE----- 67

Query: 104 GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 163
                G          K      DV + A V +    AV EFG +D+ + NAG       
Sbjct: 68  ---KTGR---------KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI---CPL 112

Query: 164 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM----------DGAGSGG 213
                 +        + VG I     A+  +     G  I                G+GG
Sbjct: 113 GAHLPVQAFADAFDVDFVGVINTVHAALPYLT---SGASIITTGSVAGLIAAAQPPGAGG 169

Query: 214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
              P  A Y   K  +      L  +     +  +   P  V TD+L S   
Sbjct: 170 PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM 221

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 86.7 bits (215), Expect = 1e-19
 Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 60/251 (23%)

Query: 51  AGPRNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 109
           +G    ++TG  +G+G A+ R+   L    VV+ +R     +  V +L+           
Sbjct: 2   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--------- 52

Query: 110 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 169
                            D+ +   ++ L +F   E+G +D+ +NNAG            +
Sbjct: 53  --------GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFH 103

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQP----------KGGHIFNMDGAGSGGSSTPLT 219
            + E  + TN  G+     E + +++ Q                           S  +T
Sbjct: 104 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 163

Query: 220 ---------------------------AVYGSTKCGL----RQLQASLFKESKRSKVGVH 248
                                      + YG TK G+    R     L ++ K  K+ ++
Sbjct: 164 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLN 223

Query: 249 TASPGMVLTDL 259
              PG V TD+
Sbjct: 224 ACCPGWVRTDM 234

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 30/211 (14%), Positives = 57/211 (27%), Gaps = 29/211 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           + ITGS  G+G AL      +G  V+   R    +   ++                    
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPG----------------- 46

Query: 116 LVHAKVAGIACDVCEPADVQ-KLSNFA----VNEFGSIDIWINNAGTNKGFKPLL-QFTN 169
               +   +A  +     V   L   A          + + +N  G +     L    + 
Sbjct: 47  ---GRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSR 103

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
            +    V    + +       + ++      G                    Y  +K  +
Sbjct: 104 GQQPAAVIVGSIAATQPGAAELPMVEAM-LAGDEARA--IELAEQQGQTHLAYAGSKYAV 160

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
             L      +     V ++  +PG V T LL
Sbjct: 161 TCLARRNVVDWAGRGVRLNVVAPGAVETPLL 191

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 83.7 bits (208), Expect = 2e-18
 Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 22/219 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM-----TVTELEENLKEGMMAA 108
           +  +ITG  RG+G++ A     +G  + +  R   S  +     T  +L E +   +   
Sbjct: 11  KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL-VEKT 69

Query: 109 GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 168
           G          +      DV + A ++     A +  G IDI I NAG +     L +  
Sbjct: 70  GR---------RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVE 119

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTK 226
           + + ++++ TNL G+          M  +   G I  +    S  G S+    A Y S+K
Sbjct: 120 SAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTV---SSMLGHSANFAQASYVSSK 175

Query: 227 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 265
            G+  L      +     + V+  +PG + T +  +   
Sbjct: 176 WGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFV 214

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 23/154 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TG+ RG+G  +A  F   G  VV                 E+LK      GG+  
Sbjct: 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA---------AEDLKRVADKVGGT-- 262

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEI 172
                     +  DV     V K++       G  +DI +NNAG  +  K L     +  
Sbjct: 263 ---------ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRD-KLLANMDEKRW 312

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
           + +++ NL+     T   +       +GG +  +
Sbjct: 313 DAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGL 345

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 76.5 bits (189), Expect = 3e-16
 Identities = 51/222 (22%), Positives = 77/222 (34%), Gaps = 53/222 (23%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+ ++TG   GLG+A A      G RVVV     E                         
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------------------ 38

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNE 170
                  +  +  DV    DV++    A  E   +   ++ AG     K L +      E
Sbjct: 39  -----EDLIYVEGDVTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLE 92

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNM------DG-AGSGGSSTPL 218
              +++  NL+G+    R A   MR+ P       G I N       +G  G        
Sbjct: 93  SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ------- 145

Query: 219 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
            A Y ++K G+  L     +E     + V T +PG+  T LL
Sbjct: 146 -AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL 186

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 76.9 bits (190), Expect = 3e-16
 Identities = 56/224 (25%), Positives = 84/224 (37%), Gaps = 49/224 (21%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            V+TG   GLG A  +  L +G +VVV     E V   V +L +                
Sbjct: 12  AVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADLGDR--------------- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNEEI 172
                    A DV + A V    +      G++ I +N AGT    + L +   F+    
Sbjct: 54  -----ARFAAADVTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAF 107

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQP-------KGGHIFNM------DG-AGSGGSSTPL 218
            +IV  NLVGS    R A   +           + G I N       DG  G        
Sbjct: 108 RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQ------- 160

Query: 219 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            A Y ++K G+  +   + ++    ++ V T +PG+  T LL S
Sbjct: 161 -AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS 203

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 73.8 bits (181), Expect = 6e-15
 Identities = 50/281 (17%), Positives = 84/281 (29%), Gaps = 97/281 (34%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  V+TG  +G+G  + ++   +G  VV+  R        V +L+ +             
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS------------- 59

Query: 114 KNLVHAKVAGIACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAG---------------- 156
               H  V     DV +P   +  L++F    FG +DI +NNAG                
Sbjct: 60  ---NHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMIS 116

Query: 157 -------------TNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG--- 200
                             + L+  T E  E+ +  N  G    T   + +++        
Sbjct: 117 DIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIV 176

Query: 201 ---------GHIFNMDGAGSGGSSTPLT-----------------------------AVY 222
                     ++ N       G    LT                             A Y
Sbjct: 177 NVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAY 236

Query: 223 GSTKCGL----RQLQASLFKESKRSKVGVHTASPGMVLTDL 259
            ++K  L    R L   +       K  V+   PG+V T++
Sbjct: 237 TTSKACLNAYTRVLANKI------PKFQVNCVCPGLVKTEM 271

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 68.5 bits (168), Expect = 2e-13
 Identities = 30/232 (12%), Positives = 57/232 (24%), Gaps = 69/232 (29%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           +VI+G   G+G A  +    +G ++V                                  
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRD---------------------------- 35

Query: 116 LVHAKVAGIACDVCEPADVQK-LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 174
                 A +  D+      ++ +++        +D  +  AG     K L          
Sbjct: 36  ------AEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL--------GN 81

Query: 175 IVSTNLVGSILCTREAMRVMRDQPKG--------------------------GHIFNMDG 208
           +VS N  G+       +  ++   +                           G       
Sbjct: 82  VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA 141

Query: 209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
                        Y  +K  L             + V ++T +PG   T LL
Sbjct: 142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL 193

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.8 bits (162), Expect = 5e-12
 Identities = 65/398 (16%), Positives = 106/398 (26%), Gaps = 146/398 (36%)

Query: 27  YSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS 86
           Y +L           + +  E  +       +    R           L  D  V A  +
Sbjct: 91  YKFL----------MSPIKTE-QRQPSMMTRMYIEQRDR---------LYNDNQVFAKYN 130

Query: 87  SESVRMTVTELEENLKE----------GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK 136
              ++    +L + L E          G+    GS K  +        A DVC    VQ 
Sbjct: 131 VSRLQP-YLKLRQALLELRPAKNVLIDGV---LGSGKTWV--------ALDVCLSYKVQC 178

Query: 137 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD 196
             +F +  F     W+N    N             +E +         L  +       D
Sbjct: 179 KMDFKI--F-----WLNLKNCNS--------PETVLEMLQK-------LLYQ------ID 210

Query: 197 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 256
                   N        S+  L     S +  LR+L  S  K  +   +         VL
Sbjct: 211 P-------NWTSRSDHSSNIKLR--IHSIQAELRRLLKS--KPYENCLL---------VL 250

Query: 257 TDLLLSGSTIQNKQ---MFNIICE-LPET----VARTLVPRIRVVKGSGKAINYLTPPRI 308
            +       +QN +    FN+ C+ L  T    V   L                LTP   
Sbjct: 251 LN-------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE- 302

Query: 309 LLALVTAWLRRGRWFDD------QGR----ALYAAE----ADRIRNW------------- 341
           + +L+  +L       D             ++ A           NW             
Sbjct: 303 VKSLLLKYL--DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360

Query: 342 --------AENRARFSFTDAMEMYTENTWVSVFSLSVV 371
                   AE R  F   D + ++  +  +    LS++
Sbjct: 361 SSLNVLEPAEYRKMF---DRLSVFPPSAHIPTILLSLI 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 8e-07
 Identities = 41/289 (14%), Positives = 82/289 (28%), Gaps = 76/289 (26%)

Query: 167 FTNEEIEQIV-------STNLVGSILCTREAMRVMR-----DQPKGGHIFNMDGAGSGGS 214
            + EEI+ I+        T  +   L +++   V +      +     + +         
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 215 STPLTAVYGSTKCGL-------------R-----QLQASLFKESKRSKVGVHTASPGM-- 254
           S   T +Y   +  L             R     +L+ +L +      V +     G+  
Sbjct: 106 SMM-TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID----GVLG 160

Query: 255 ----VLTDLLLSGSTIQNKQMFNII------CELPETVARTLVPRIRVVKGSGKA-INYL 303
                +   +     +Q K  F I       C  PETV   L   +  +  +  +  ++ 
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 304 TPPRILLALVTAWLRR---GR------------W-------FDDQGRAL----YAAEADR 337
           +  ++ +  + A LRR    +                    F+   + L    +    D 
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF 280

Query: 338 IRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFP 386
           +   A      S        T +   S+    + C    L      T P
Sbjct: 281 LS--AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 31/125 (24%), Positives = 45/125 (36%), Gaps = 35/125 (28%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R VVITG+  GLG   ARE    G  V++A R +         +                
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA--------------- 61

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--------TNKGFKPLL 165
                 +V     D+ + + V++      +     D+ INNAG        T  GF+   
Sbjct: 62  -----GQVEVRELDLQDLSSVRR----FADGVSGADVLINNAGIMAVPYALTVDGFE--S 110

Query: 166 QF-TN 169
           Q  TN
Sbjct: 111 QIGTN 115

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 12/103 (11%), Positives = 23/103 (22%), Gaps = 25/103 (24%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+   T  +G   A      G  VV+  R  +  +     + +              
Sbjct: 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK-------------- 165

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 156
                 KV   A +  + A   +                    
Sbjct: 166 ----RFKVNVTAAETADDASRAEA-------VKGAHFVFTAGA 197

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 22/87 (25%)

Query: 56  VVITGSTRGLGKALAREFLLS-GDR-VVVASRS---SESVRMTVTELEENLKEGMMAAGG 110
           V++TG T  LG  +AR  ++  G R +V+ SR    +      V +L         A G 
Sbjct: 533 VLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT--------AYG- 583

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKL 137
                   A+V+  ACDV +   + K+
Sbjct: 584 --------AEVSLQACDVADRETLAKV 602

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 50  KAGPRNVVITGSTRGL-GKALAREFLLSGDRVVVASRSSESVR 91
              P  V ITGS  GL G+AL  +    G  V+   R      
Sbjct: 144 DGSPLTVAITGSR-GLVGRALTAQLQTGGHEVIQLVRKEPKPG 185

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	388
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.98
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.88
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.86
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.86
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.86
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.85
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.84
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.84
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.84
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.83
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.83
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.83
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.83
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.82
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.82
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.82
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.82
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.82
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.81
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.81
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.81
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.81
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.8
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.8
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.8
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.79
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.79
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.79
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.79
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.79
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.78
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.78
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.78
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.78
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.78
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.78
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.77
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.77
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.77
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.77
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.77
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.76
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.76
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.76
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.76
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.76
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.75
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.74
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.74
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.73
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.73
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.73
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.73
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.73
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.73
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.73
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.71
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.69
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.68
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.68
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.67
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.67
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.67
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.66
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.65
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.64
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.64
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.63
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.61
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.6
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.59
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.59
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.59
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.59
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.58
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.57
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.55
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.54
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.51
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.5
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.45
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.45
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.44
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.41
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.38
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.38
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.36
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.33
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.02
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.91
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.9
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.74
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.71
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.69
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.68
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.6
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.56
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.55
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.54
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.48
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.39
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.32
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.32
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.32
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.3
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.29
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.25
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.22
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.22
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.22
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.19
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.19
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.12
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.07
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.03
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.96
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.96
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.92
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.91
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.91
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.83
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.77
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.75
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.74
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.73
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.72
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.72
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.69
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.68
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.67
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.65
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.65
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.63
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.6
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.6
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.59
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.55
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.53
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.51
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.49
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.49
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.48
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.46
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.46
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.42
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.4
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.38
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.37
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.34
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.32
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.3
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.28
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.27
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.17
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.17
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.17
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.16
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.12
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.11
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.08
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.05
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.04
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.03
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.99
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.97
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.97
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.97
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.96
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.95
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.93
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.9
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.88
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.86
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.84
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.84
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.83
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.83
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.82
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.82
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.81
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.8
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.8
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.75
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.75
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.74
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.74
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.7
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.69
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.67
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.65
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.62
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.6
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.6
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.59
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.57
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.56
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.55
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.54
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.53
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.5
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.48
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.47
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.46
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.46
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.44
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.37
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.37
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.27
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.26
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.26
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.23
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.23
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.22
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.17
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.15
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.14
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.13
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	96.13
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.12
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.11
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.06
1lnq_A	336	MTHK channels, potassium channel related protein;	95.99
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.99
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.85
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.8
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.8
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.79
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.77
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.75
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.73
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	95.73
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.69
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.68
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.67
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.66
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.62
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.61
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.59
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.56
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.55
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.53
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.49
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.49
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.46
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.43
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.39
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.37
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.33
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.3
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.3
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.28
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.24
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.2
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.16
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.08
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.07
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.03
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	94.98
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.94
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.94
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	94.93
4g65_A	461	TRK system potassium uptake protein TRKA; structur	94.93
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	94.87
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	94.87
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	94.82
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	94.78
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.78

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=5.9e-54  Score=398.98  Aligned_cols=251  Identities=24%  Similarity=0.320  Sum_probs=223.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++|
T Consensus         2 y~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~-----------------~g~~~~~~~~D   64 (254)
T 4fn4_A            2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-----------------MGKEVLGVKAD   64 (254)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEcc
Confidence            4689999999999999999999999999999999999999999999998876                 35679999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.++||+||+||||||+..+..++.+.++++|++++++|+.|+|+++|+++|+|+++ +.|+|||+|
T Consensus        65 vt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnis  143 (254)
T 4fn4_A           65 VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNTA  143 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEe
Confidence            9999999999999999999999999999987656789999999999999999999999999999999988 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+..............      ..-...++
T Consensus       144 S~-~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~------~~~~~~~~  216 (254)
T 4fn4_A          144 SI-AGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRT------LTKLMSLS  216 (254)
T ss_dssp             CG-GGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHH------HHHHHTTC
T ss_pred             ch-hhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHH------HHhcCCCC
Confidence            98 788899999999999999999999999999999999999999999999875543221111100      01112356


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +|+..|+|++..+.||+|+...+++|+.+.+||+|.
T Consensus       217 ~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          217 SRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence            889999999999999999999999999999999984

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=9.3e-54  Score=397.84  Aligned_cols=251  Identities=24%  Similarity=0.304  Sum_probs=226.0

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+                 .+.++.++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~-----------------~g~~~~~~~~   65 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-----------------KGYDAHGVAF   65 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----------------TTCCEEECCC
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEe
Confidence            34689999999999999999999999999999999999999999999888876                 3467899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.++||+||+||||||+.. ..++.+.++++|++++++|+.|+|+++|+++|+|++++++|+|||+
T Consensus        66 Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVni  144 (255)
T 4g81_D           66 DVTDELAIEAAFSKLDAEGIHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINI  144 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             eCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence            999999999999999999999999999999987 7899999999999999999999999999999999876568999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.|+...|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.......  +..      ......+.+
T Consensus       145 sS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~------~~~~~~~~P  215 (255)
T 4g81_D          145 GSL-TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQF------DSWVKSSTP  215 (255)
T ss_dssp             CCG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHH------HHHHHHHST
T ss_pred             eeh-hhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHH------HHHHHhCCC
Confidence            998 78889999999999999999999999999999999999999999999986432211  000      112234567


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ++|+..|+|++..+.||+|+...+++|+.+.+||+|..
T Consensus       216 l~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          216 SQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGWLA  253 (255)
T ss_dssp             TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCeEe
Confidence            89999999999999999999999999999999999853

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.4e-52  Score=382.88  Aligned_cols=246  Identities=18%  Similarity=0.242  Sum_probs=212.4

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      |++.++++||++|||||++|||+++|+.|+++|++|++++|+.+  ++..+++++                 .+.++..+
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~-----------------~g~~~~~~   61 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAK-----------------DGGNASAL   61 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHH-----------------TTCCEEEE
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHH-----------------hCCcEEEE
Confidence            34568999999999999999999999999999999999999864  344455544                 35678999


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|++|+++++++++     +|++|+||||||+.. ..++.+.++++|++++++|+.|+|+++|+++|+|+++++.|+||
T Consensus        62 ~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IV  135 (247)
T 4hp8_A           62 LIDFADPLAAKDSFT-----DAGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVV  135 (247)
T ss_dssp             ECCTTSTTTTTTSST-----TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             EccCCCHHHHHHHHH-----hCCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEE
Confidence            999999999887663     589999999999987 68999999999999999999999999999999998876689999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      |+||. ++..+.++..+|++||+|+.+|+|+||.|++++|||||+|+||+|+||+.........  .      ......+
T Consensus       136 nisS~-~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~--~------~~~~~~~  206 (247)
T 4hp8_A          136 NIASL-LSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAA--R------NKAILER  206 (247)
T ss_dssp             EECCG-GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHH--H------HHHHHTT
T ss_pred             EEech-hhCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHH--H------HHHHHhC
Confidence            99998 7888999999999999999999999999999999999999999999998643221100  0      0122334


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      .+++|++.|+|++..+.||+|+...+++|+.+.+||+|..
T Consensus       207 ~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          207 IPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             CTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECccccc
Confidence            6788999999999999999999999999999999999853

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=5e-51  Score=382.86  Aligned_cols=246  Identities=23%  Similarity=0.357  Sum_probs=212.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++                    +.++..+++|++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~--------------------g~~~~~~~~Dv~   85 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI--------------------GGGAVGIQADSA   85 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTCEEEECCTT
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------------------CCCeEEEEecCC
Confidence            589999999999999999999999999999999999999988776654                    246788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.++||+||+||||||+.. ..++.+.++++|++++++|+.|+++++|+++|+|++   .|+|||+||.
T Consensus        86 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~  161 (273)
T 4fgs_A           86 NLAELDRLYEKVKAEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGST  161 (273)
T ss_dssp             CHHHHHHHHHHHHHHHSCEEEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeeh
Confidence            999999999999999999999999999977 789999999999999999999999999999999974   4899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.|+..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+..+............   ..+...+.+++|
T Consensus       162 -~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~---~~~~~~~~PlgR  237 (273)
T 4fgs_A          162 -AGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGL---LNALAAQVPMGR  237 (273)
T ss_dssp             -GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHH---HHHHHHHSTTSS
T ss_pred             -hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHH---HHHHHhcCCCCC
Confidence             7788999999999999999999999999999999999999999999998765432211111000   122345567899


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++.|+|++..+.||+|+...+++|+.+.+||++.
T Consensus       238 ~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          238 VGRAEEVAAAALFLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCCeEeECcChh
Confidence            9999999999999999999999999999999873

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=4.1e-50  Score=374.53  Aligned_cols=249  Identities=17%  Similarity=0.210  Sum_probs=209.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++.+. .+++.+                 .+.++.++++|
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~~-----------------~~~~~~~~~~D   63 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALAQ-----------------RQPRATYLPVE   63 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHHH-----------------HCTTCEEEECC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHHh-----------------cCCCEEEEEee
Confidence            368999999999999999999999999999999999999877543 344443                 24578899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.++||+||+||||||+..  ....+.+.++|++++++|+.++++++|+++|+|+++  +|+|||+|
T Consensus        64 v~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnis  139 (258)
T 4gkb_A           64 LQDDAQCRDAVAQTIATFGRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNIS  139 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEe
Confidence            99999999999999999999999999999865  344588999999999999999999999999999865  59999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+............    ....+...+.++
T Consensus       140 S~-~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~----~~~~~~~~~~pl  214 (258)
T 4gkb_A          140 SK-TAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPE----AKLAEIAAKVPL  214 (258)
T ss_dssp             CT-HHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---------------CHHHHHHTTCTT
T ss_pred             eh-hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChH----HHHHHHHhcCCC
Confidence            98 6788899999999999999999999999999999999999999999999765322111000    000122233455


Q ss_pred             -hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 -PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                       +|+..|+|++..+.||+|+...+++|+.+.+||+|.
T Consensus       215 g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          215 GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence             588999999999999999999999999999999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=6.6e-50  Score=368.17  Aligned_cols=232  Identities=21%  Similarity=0.321  Sum_probs=200.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++.                       .+.++..+++|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-----------------------~~~~~~~~~~Dv~~   65 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-----------------------RHPRIRREELDITD   65 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-----------------------CCTTEEEEECCTTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-----------------------hcCCeEEEEecCCC
Confidence            5899999999999999999999999999999999998765321                       23578899999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++    ++|++|+||||||+.   .++.+.+.++|++++++|+.|+++++|+++|+|+++  +|+|||+||. 
T Consensus        66 ~~~v~~~~~----~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~-  135 (242)
T 4b79_A           66 SQRLQRLFE----ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASM-  135 (242)
T ss_dssp             HHHHHHHHH----HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCG-
T ss_pred             HHHHHHHHH----hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeec-
Confidence            999887764    579999999999984   467889999999999999999999999999999865  5999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhh
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  290 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~  290 (388)
                      ++..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+......... .       ..+...+.+++|+
T Consensus       136 ~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~-~-------~~~~~~~~PlgR~  207 (242)
T 4b79_A          136 YSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVE-A-------TRRIMQRTPLARW  207 (242)
T ss_dssp             GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHH-H-------HHHHHHTCTTCSC
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHH-H-------HHHHHhcCCCCCC
Confidence            7888999999999999999999999999999999999999999999998754332110 0       1123345678999


Q ss_pred             hhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          291 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       291 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..|+|++..+.||+||+..+++|+.+.+||+|.
T Consensus       208 g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          208 GEAPEVASAAAFLCGPGASFVTGAVLAVDGGYL  240 (242)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhCchhcCccCceEEECccHh
Confidence            999999999999999999999999999999985

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.9e-48  Score=360.39  Aligned_cols=231  Identities=22%  Similarity=0.276  Sum_probs=205.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+||||||++|||+++|++|+++|++|++++|++++++++.++                     ..++.++++|++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------------------~~~~~~~~~Dv~~~~   60 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------------------RPNLFYFHGDVADPL   60 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------------------CTTEEEEECCTTSHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------------------cCCEEEEEecCCCHH
Confidence            39999999999999999999999999999999998877654322                     246888999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++  +|+|||+||. ++
T Consensus        61 ~v~~~v~~~~~~~g~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~-~~  136 (247)
T 3ged_A           61 TLKKFVEYAMEKLQRIDVLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIAST-RA  136 (247)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCG-GG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeec-cc
Confidence            999999999999999999999999987 6899999999999999999999999999999999976  4999999998 78


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      ..+.|+..+|++||+|+.+|+|+||.|+++ |||||+|+||+|+|++..+.              ..+...+.+++|+..
T Consensus       137 ~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~--------------~~~~~~~~Pl~R~g~  201 (247)
T 3ged_A          137 FQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEF--------------TQEDCAAIPAGKVGT  201 (247)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---C--------------CHHHHHTSTTSSCBC
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH--------------HHHHHhcCCCCCCcC
Confidence            889999999999999999999999999997 99999999999999975322              234455667899999


Q ss_pred             ccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          293 VKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      |+|++..+.||+++  .+++|+.+.+||++...
T Consensus       202 pediA~~v~fL~s~--~~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          202 PKDISNMVLFLCQQ--DFITGETIIVDGGMSKR  232 (247)
T ss_dssp             HHHHHHHHHHHHHC--SSCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHHhC--CCCCCCeEEECcCHHHh
Confidence            99999999999975  47899999999998653

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=6.9e-49  Score=367.15  Aligned_cols=244  Identities=17%  Similarity=0.193  Sum_probs=207.2

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.++.                           ..+...+++
T Consensus         5 dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------------------------~~~~~~~~~   57 (261)
T 4h15_A            5 EFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---------------------------LPEELFVEA   57 (261)
T ss_dssp             CCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------------------SCTTTEEEC
T ss_pred             hccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------------------------CCcEEEEEc
Confidence            44789999999999999999999999999999999999975421                           122346899


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      |++|+++++++++++.+++|++|+||||||+..+ .+++.+.++++|++++++|+.++++++|+++|+|+++ +.|+|||
T Consensus        58 Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Iv~  136 (261)
T 4h15_A           58 DLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVVVH  136 (261)
T ss_dssp             CTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceEEE
Confidence            9999999999999999999999999999998542 3578999999999999999999999999999999988 5799999


Q ss_pred             ecCCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH---
Q 016493          206 MDGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET---  281 (388)
Q Consensus       206 isS~~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~---  281 (388)
                      +||. ++..+.| +...|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.........+    ....+++.   
T Consensus       137 isS~-~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~----~~~~~~~~~~~  211 (261)
T 4h15_A          137 VTSI-QRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAK----QAGTDLEGGKK  211 (261)
T ss_dssp             ECCG-GGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHH----HTTCCHHHHHH
T ss_pred             EEeh-hhccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHH----hhccchhhHHH
Confidence            9998 5666665 5789999999999999999999999999999999999999986542211111    11111221   


Q ss_pred             -----HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          282 -----VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       282 -----vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                           .++.+++|+..|+|++..+.||+|+...+++|+.+.+||+|.
T Consensus       212 ~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          212 IIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence                 223467889999999999999999999999999999999985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=9.3e-48  Score=359.10  Aligned_cols=248  Identities=17%  Similarity=0.090  Sum_probs=216.5

Q ss_pred             ccCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           48 HCKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        48 ~~~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +++++||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++++.                .+.++.+++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~   64 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL----------------NQPEAHLYQ   64 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG----------------TCSSCEEEE
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------CCCcEEEEE
Confidence            3689999999999875  9999999999999999999999999988887766542                235788999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      +|++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|+..+++|+.+++.+++.+.|.|+   ++|+
T Consensus        65 ~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~  141 (256)
T 4fs3_A           65 IDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP---EGGS  141 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT---TCEE
T ss_pred             ccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCE
Confidence            99999999999999999999999999999998642   34567889999999999999999999999988775   3599


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      |||+||. ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+||+........  ..      ..+..
T Consensus       142 IVnisS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~------~~~~~  212 (256)
T 4fs3_A          142 IVATTYL-GGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFN--TI------LKEIK  212 (256)
T ss_dssp             EEEEECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH--HH------HHHHH
T ss_pred             EEEEecc-ccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCH--HH------HHHHH
Confidence            9999998 788899999999999999999999999999999999999999999999875433211  11      12334


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+.+++|+..|+|++..+.||+||...+++|+.+.+||+|.
T Consensus       213 ~~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          213 ERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             HHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence            55678999999999999999999999999999999999985

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=8.9e-45  Score=340.32  Aligned_cols=257  Identities=18%  Similarity=0.250  Sum_probs=218.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D   67 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF---------------PGARLFASVCD   67 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---------------TTCCEEEEECC
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---------------CCceEEEEeCC
Confidence            367899999999999999999999999999999999999999998888886632               12458999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++|
T Consensus        68 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~is  145 (265)
T 3lf2_A           68 VLDALQVRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVN  145 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHHCSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEEC
Confidence            99999999999999999999999999999976 6889999999999999999999999999999999987 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH---
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR---  284 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~---  284 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+.............. .....+...+   
T Consensus       146 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  223 (265)
T 3lf2_A          146 SL-LASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELD-WAQWTAQLARNKQ  223 (265)
T ss_dssp             EG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------C-HHHHHHHHHHHTT
T ss_pred             Cc-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccC-HHHHHHHHhhccC
Confidence            98 678888999999999999999999999999999999999999999999864322110000000 0000111222   


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+++++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       224 ~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          224 IPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            466778899999999999999999889999998888874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.4e-45  Score=342.09  Aligned_cols=256  Identities=22%  Similarity=0.319  Sum_probs=219.8

Q ss_pred             hhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           42 NMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        42 ~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      .......++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++
T Consensus         9 ~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~   72 (266)
T 4egf_A            9 DDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ----------------FGTDV   72 (266)
T ss_dssp             -CCBCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCE
T ss_pred             chhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcE
Confidence            33444567899999999999999999999999999999999999999999888887653                23578


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      .++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++++..|
T Consensus        73 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g  151 (266)
T 4egf_A           73 HTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGG  151 (266)
T ss_dssp             EEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCE
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCe
Confidence            99999999999999999999999999999999999987 57889999999999999999999999999999999875578


Q ss_pred             EEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          202 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       202 ~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                      +||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......... .       ....
T Consensus       152 ~iv~isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~-------~~~~  222 (266)
T 4egf_A          152 AIITVASA-AALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEA-K-------SAPM  222 (266)
T ss_dssp             EEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHH-H-------HHHH
T ss_pred             EEEEEcch-hhccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChH-H-------HHHH
Confidence            99999998 6788889999999999999999999999999999999999999999998643211000 0       0111


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..+.+++++..|+|++..+.||+++...+.+|+.+..||++.
T Consensus       223 ~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          223 IARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCcc
Confidence            223456677788889999999999988888888888888874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.6e-44  Score=337.02  Aligned_cols=250  Identities=23%  Similarity=0.345  Sum_probs=214.4

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      .....++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.+
T Consensus         3 ~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~   65 (256)
T 3gaf_A            3 SYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-----------------AGGKAIG   65 (256)
T ss_dssp             ---CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH-----------------TTCCEEE
T ss_pred             CCcCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEE
Confidence            34456789999999999999999999999999999999999999999888888765                 3467899


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      +++|++|+++++++++++.+++|++|+||||||+.. ..++ +.+.++|++++++|+.++++++++++|.|+++ +.|+|
T Consensus        66 ~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~i  142 (256)
T 3gaf_A           66 LECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAI  142 (256)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEE
T ss_pred             EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            999999999999999999999999999999999976 4666 89999999999999999999999999999987 57999


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........   ..      .....
T Consensus       143 v~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~------~~~~~  212 (256)
T 3gaf_A          143 LNISSM-AGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPE---IE------RAMLK  212 (256)
T ss_dssp             EEECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHH---HH------HHHHT
T ss_pred             EEEcCH-HHcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHH---HH------HHHHh
Confidence            999998 678888999999999999999999999999999999999999999999864321110   00      01112


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..+++++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       213 ~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          213 HTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcc
Confidence            2345677788888888899999988888888888888764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.9e-44  Score=339.38  Aligned_cols=256  Identities=20%  Similarity=0.277  Sum_probs=210.3

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      .+..+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++
T Consensus        20 ~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~   82 (283)
T 3v8b_A           20 FQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-----------------AGGQAIAL   82 (283)
T ss_dssp             -------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT-----------------TTCCEEEE
T ss_pred             hhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEE
Confidence            3445678999999999999999999999999999999999999998888777643                 34678999


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||
T Consensus        83 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv  161 (283)
T 3v8b_A           83 EADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIV  161 (283)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             EccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEE
Confidence            9999999999999999999999999999999986545788999999999999999999999999999999987 579999


Q ss_pred             EecCCCCCCC--CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          205 NMDGAGSGGS--STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       205 ~isS~~~~~~--~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ++||. ++..  +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++............ ......  ..
T Consensus       162 ~isS~-~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~--~~  237 (283)
T 3v8b_A          162 VVSSI-NGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEET-AIPVEW--PK  237 (283)
T ss_dssp             EECCS-BTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHH-SCCCBC--TT
T ss_pred             EEcCh-hhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhh-hhhhhh--hh
Confidence            99998 5555  678889999999999999999999999999999999999999998754321111100 000000  00


Q ss_pred             HHHHh--hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 ARTLV--PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 A~~~l--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...++  +++..|+|++..+.||+++...+++|..+..||++
T Consensus       238 ~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          238 GQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             CSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             hcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            11233  66778888888889999999888888888888876

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.5e-44  Score=335.57  Aligned_cols=243  Identities=24%  Similarity=0.375  Sum_probs=210.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.                    .+...+++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~   62 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--------------------DNGKGMAL   62 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------------------GGEEEEEC
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------ccceEEEE
Confidence            3567899999999999999999999999999999999999988877666542                    34678999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++
T Consensus        63 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~i  140 (248)
T 3op4_A           63 NVTNPESIEAVLKAITDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINV  140 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            999999999999999999999999999999987 5788999999999999999999999999999999887 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          .......+
T Consensus       141 sS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----------~~~~~~~p  209 (248)
T 3op4_A          141 GSV-VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQR----------TATLAQVP  209 (248)
T ss_dssp             CCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHH----------HHHHHTCT
T ss_pred             cch-hhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHH----------HHHHhcCC
Confidence            997 6777888999999999999999999999999999999999999999998754321110          11122334


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.||+++...+.+|..+..||++
T Consensus       210 ~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          210 AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            566778888888888999998878888888888876

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=3.4e-44  Score=337.68  Aligned_cols=249  Identities=22%  Similarity=0.296  Sum_probs=218.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++++
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   82 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN-----------------VGHDAEAVAF   82 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----------------TTCCEEECCC
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEc
Confidence            34689999999999999999999999999999999999999999988888765                 3467899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++
T Consensus        83 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~i  160 (271)
T 4ibo_A           83 DVTSESEIIEAFARLDEQGIDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNI  160 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999999999999999977 6888999999999999999999999999999999987 46999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ........+
T Consensus       161 sS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~------~~~~~~~~p  231 (271)
T 4ibo_A          161 GSL-TSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEF------DAWVKARTP  231 (271)
T ss_dssp             CCG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHH------HHHHHHHST
T ss_pred             ccH-HhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHH------HHHHHhcCC
Confidence            998 67888899999999999999999999999999999999999999999986432110  000      011233456


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       232 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          232 AKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCee
Confidence            7788899999999999999998888888888888764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6e-44  Score=334.24  Aligned_cols=249  Identities=24%  Similarity=0.314  Sum_probs=214.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                ...++.++++|
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D   68 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----------------GSGKVIGVQTD   68 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------SSSCEEEEECC
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------CCCcEEEEEcC
Confidence            46789999999999999999999999999999999999999998888877542                12578999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++|
T Consensus        69 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~is  146 (262)
T 3pk0_A           69 VSDRAQCDALAGRAVEEFGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-GSGRVVLTS  146 (262)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-SSCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            99999999999999999999999999999977 6888999999999999999999999999999999987 479999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |..+...+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          .......++
T Consensus       147 S~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----------~~~~~~~p~  216 (262)
T 3pk0_A          147 SITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYI----------ASMARSIPA  216 (262)
T ss_dssp             CSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHH----------HHHHTTSTT
T ss_pred             chhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHH----------HHHHhcCCC
Confidence            9843347788999999999999999999999999999999999999999997643221110          011122345


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +++..|++++..+.||+++...+.+|..+..||++..
T Consensus       217 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          217 GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            6677888888888999999988888888888888754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.1e-43  Score=331.81  Aligned_cols=247  Identities=22%  Similarity=0.339  Sum_probs=215.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++|++|||||++|||+++|++|+++|++|++. +|+.+++++..+++.+                 .+.++.++++|++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   64 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-----------------LGVKVLVVKANVG   64 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            368999999999999999999999999999987 8999888888777754                 3467999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~  142 (258)
T 3oid_A           65 QPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSL  142 (258)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECch
Confidence            999999999999999999999999999876 6888999999999999999999999999999999987 57999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........  ..      ........++++
T Consensus       143 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~------~~~~~~~~p~~r  213 (258)
T 3oid_A          143 -GSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRE--DL------LEDARQNTPAGR  213 (258)
T ss_dssp             -GGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHH--HH------HHHHHHHCTTSS
T ss_pred             -hhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCH--HH------HHHHHhcCCCCC
Confidence             678888999999999999999999999999999999999999999999875432110  00      012233445677


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      +..|+|++..+.||+++...+.+|..+..||++...
T Consensus       214 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~  249 (258)
T 3oid_A          214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLL  249 (258)
T ss_dssp             CBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGB
T ss_pred             CcCHHHHHHHHHHHhCcccCCccCCEEEECCCccCC
Confidence            888999999999999998888889999999888543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.5e-43  Score=334.24  Aligned_cols=251  Identities=25%  Similarity=0.363  Sum_probs=216.6

Q ss_pred             hhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEE
Q 016493           43 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  122 (388)
Q Consensus        43 ~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  122 (388)
                      +.....++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.
T Consensus        22 m~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~   84 (276)
T 3r1i_A           22 MSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG-----------------VGGKAL   84 (276)
T ss_dssp             -CGGGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-----------------TTCCCE
T ss_pred             cccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEE
Confidence            334456789999999999999999999999999999999999999999888888765                 345788


Q ss_pred             EEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          123 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       123 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      ++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++++.+|+
T Consensus        85 ~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~  163 (276)
T 3r1i_A           85 PIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGT  163 (276)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Confidence            9999999999999999999999999999999999987 678889999999999999999999999999999998755699


Q ss_pred             EEEecCCCCCCCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH
Q 016493          203 IFNMDGAGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  280 (388)
Q Consensus       203 Iv~isS~~~~~~~~--~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  280 (388)
                      ||++||. ++..+.  ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......           ...
T Consensus       164 iv~isS~-~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----------~~~  231 (276)
T 3r1i_A          164 IITTASM-SGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY-----------HAL  231 (276)
T ss_dssp             EEEECCG-GGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG-----------HHH
T ss_pred             EEEECch-HhcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH-----------HHH
Confidence            9999997 444332  36788999999999999999999999999999999999999987542110           011


Q ss_pred             HHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          281 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       281 ~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .....+++++..|+|++..+.||+++...+.+|+.+..||++.
T Consensus       232 ~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          232 WEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence            1223456788899999999999999998888999898888874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=6.3e-44  Score=336.56  Aligned_cols=256  Identities=20%  Similarity=0.200  Sum_probs=219.2

Q ss_pred             hhhhhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccC
Q 016493           39 VGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH  118 (388)
Q Consensus        39 ~~~~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~  118 (388)
                      +...+.+...++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+
T Consensus        19 ~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~   81 (275)
T 4imr_A           19 YFQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA-----------------SG   81 (275)
T ss_dssp             CSCTTSHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH-----------------TT
T ss_pred             ccccccccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cC
Confidence            3445556666789999999999999999999999999999999999999999888887765                 34


Q ss_pred             ceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 016493          119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  198 (388)
Q Consensus       119 ~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  198 (388)
                      .++.++++|++|.++++++++++.+. +++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ 
T Consensus        82 ~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-  158 (275)
T 4imr_A           82 GTAQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-  158 (275)
T ss_dssp             CCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             CeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence            67899999999999999999999887 99999999999977 5788999999999999999999999999999999887 


Q ss_pred             CCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccC
Q 016493          199 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  278 (388)
Q Consensus       199 ~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  278 (388)
                      +.|+||++||. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++...........       .
T Consensus       159 ~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-------~  230 (275)
T 4imr_A          159 KWGRVVSIGSI-NQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEG-------W  230 (275)
T ss_dssp             TCEEEEEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHH-------H
T ss_pred             CCcEEEEECCH-HhCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHH-------H
Confidence            57999999998 566777888889999999999999999999999999999999999999864321100000       0


Q ss_pred             HHHHHHH-HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          279 PETVART-LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       279 pe~vA~~-~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+..... +++++..|+|++..+.||+++...+.+|..+..||+|
T Consensus       231 ~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          231 DEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence            1222233 5778889999999999999999888888888888775

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3.4e-43  Score=332.92  Aligned_cols=255  Identities=18%  Similarity=0.227  Sum_probs=212.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------------hHHHHHHHHHHHHHHhhhhhhcCCCC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS----------------SESVRMTVTELEENLKEGMMAAGGSS  112 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~----------------~~~l~~~~~~l~~~~~~~~~~~~~~~  112 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+                .+++++..+++.+             
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   73 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-------------   73 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-------------
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-------------
Confidence            46789999999999999999999999999999999987                6666666555543             


Q ss_pred             cccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHH
Q 016493          113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR  192 (388)
Q Consensus       113 ~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  192 (388)
                          .+.++.++++|++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|
T Consensus        74 ----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  149 (286)
T 3uve_A           74 ----HNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVP  149 (286)
T ss_dssp             ----TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ----cCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence                3467999999999999999999999999999999999999976434588999999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhh
Q 016493          193 VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF  272 (388)
Q Consensus       193 ~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  272 (388)
                      .|+++++.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ..+.
T Consensus       150 ~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~  226 (286)
T 3uve_A          150 HMIAGGRGGSIILTSSV-GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF--KMFR  226 (286)
T ss_dssp             HHHHHTSCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHH--HHHC
T ss_pred             HHHhCCCCcEEEEECch-hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchh--hhcc
Confidence            99887557999999998 67888899999999999999999999999999999999999999999987532110  0000


Q ss_pred             -hhhccCHHHHHHHH--h----hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          273 -NIICELPETVARTL--V----PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       273 -~~~~~~pe~vA~~~--l----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                       ......+++.....  .    .++..|+|++..+.||+++...+++|+.+..||++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          227 PDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             TTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence             00111233332211  0    456688899999999999998888898888888874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=7e-44  Score=330.91  Aligned_cols=242  Identities=20%  Similarity=0.296  Sum_probs=210.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~   62 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--------------------GKKARAIAADIS   62 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEECCCCTT
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEcCCC
Confidence            578999999999999999999999999999999999998887766554                    246888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++++.|+||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (247)
T 3rwb_A           63 DPGSVKALFAEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASN  141 (247)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECch
Confidence            999999999999999999999999999986 6888999999999999999999999999999999987557999999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH-HHhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR-TLVP  288 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~-~~l~  288 (388)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          ...... .+++
T Consensus       142 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----------~~~~~~~~~~~  210 (247)
T 3rwb_A          142 -TFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEA----------FGFVEMLQAMK  210 (247)
T ss_dssp             -HHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGG----------HHHHHHHSSSC
T ss_pred             -hhccCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHH----------HHHHhcccccC
Confidence             6777888999999999999999999999999999999999999999998654322111          111111 3456


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +...|++++..+.||+++...+.+|..+..||++.
T Consensus       211 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          211 GKGQPEHIADVVSFLASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            67778888888899999998888888888888874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-43  Score=334.25  Aligned_cols=251  Identities=22%  Similarity=0.246  Sum_probs=213.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++.+|++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   67 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-----------------GGGEAAALAGDVG   67 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT-----------------TTCCEEECCCCTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEECCCC
Confidence            57899999999999999999999999999999999999998888777643                 3467899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||.
T Consensus        68 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~  146 (280)
T 3tox_A           68 DEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSF  146 (280)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCS
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCh
Confidence            99999999999999999999999999987546788999999999999999999999999999999987 57999999998


Q ss_pred             CCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          210 GSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       210 ~~~~-~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                       .+. .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+.............      .......+++
T Consensus       147 -~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~------~~~~~~~p~~  219 (280)
T 3tox_A          147 -VGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETR------GFVEGLHALK  219 (280)
T ss_dssp             -BTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHH------HHHHTTSTTS
T ss_pred             -hhCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHH------HHHhccCccC
Confidence             454 67888999999999999999999999999999999999999999986542111000000      0011123456


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      ++..|++++..+.||+++...+.+|..+..||++...
T Consensus       220 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  256 (280)
T 3tox_A          220 RIARPEEIAEAALYLASDGASFVTGAALLADGGASVT  256 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence            6778888888889999998888899999999887543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1e-43  Score=335.11  Aligned_cols=253  Identities=18%  Similarity=0.240  Sum_probs=208.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------ChHHHHHHHHHHHHHHhhhhhhcCCCCccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-------------SSESVRMTVTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-------------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|             +.+++++..+++.+                
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   70 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA----------------   70 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH----------------
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----------------
Confidence            3688999999999999999999999999999999998             66777776666654                


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  195 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  195 (388)
                       .+.++.++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+
T Consensus        71 -~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~  148 (277)
T 3tsc_A           71 -ANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRII  148 (277)
T ss_dssp             -TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             -cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence             3467899999999999999999999999999999999999987 57888999999999999999999999999999999


Q ss_pred             cCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhh
Q 016493          196 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  275 (388)
Q Consensus       196 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  275 (388)
                      ++++.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........   ...
T Consensus       149 ~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---~~~  224 (277)
T 3tsc_A          149 EGGRGGSIILISSA-AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVG---QAM  224 (277)
T ss_dssp             HHTSCEEEEEECCG-GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHH---HHH
T ss_pred             hcCCCCEEEEEccH-hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhh---hcc
Confidence            87557999999998 67888899999999999999999999999999999999999999999986431100000   000


Q ss_pred             ccCHH---HHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          276 CELPE---TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       276 ~~~pe---~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ...++   ......-.++..|+|++..+.||+++...+++|..+..||++.
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            00000   0000001145677777888889999988888888888888763

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-43  Score=334.89  Aligned_cols=252  Identities=20%  Similarity=0.260  Sum_probs=207.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------ChHHHHHHHHHHHHHHhhhhhhcCCCCcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-------------SSESVRMTVTELEENLKEGMMAAGGSSKK  114 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-------------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~  114 (388)
                      ..+++||++|||||++|||+++|++|+++|++|++++|             +.++++++.+++.+               
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------   74 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED---------------   74 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT---------------
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh---------------
Confidence            35789999999999999999999999999999999998             67777777666543               


Q ss_pred             cccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHH
Q 016493          115 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM  194 (388)
Q Consensus       115 ~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m  194 (388)
                        .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|
T Consensus        75 --~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~  151 (280)
T 3pgx_A           75 --QGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAM  151 (280)
T ss_dssp             --TTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             --cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence              3467899999999999999999999999999999999999987 6788999999999999999999999999999999


Q ss_pred             HcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch----hhh
Q 016493          195 RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ----NKQ  270 (388)
Q Consensus       195 ~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~  270 (388)
                      ++++..|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+........    ...
T Consensus       152 ~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~  230 (280)
T 3pgx_A          152 IEAGNGGSIVVVSSS-AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPS  230 (280)
T ss_dssp             HHHCSCEEEEEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGG
T ss_pred             HhcCCCCEEEEEcch-hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCch
Confidence            987557999999998 678888999999999999999999999999999999999999999999864311000    000


Q ss_pred             hhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          271 MFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       271 ~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .......    ....+. ++..|+|++..+.||+++...+.+|+.+..||++.
T Consensus       231 ~~~~~~~----~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          231 FVHSFPP----MPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             GGGGSCC----BTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             hhhhhhh----cccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            0000000    000111 34567777777788988888778888888887763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.7e-43  Score=330.15  Aligned_cols=249  Identities=22%  Similarity=0.287  Sum_probs=210.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   65 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-----------------FPGQILTVQMDVR   65 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----------------STTCEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            56899999999999999999999999999999999999998887776643                 3457899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|.++++.|+||++||.
T Consensus        66 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  144 (257)
T 3imf_A           66 NTDDIQKMIEQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVAT  144 (257)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECch
Confidence            999999999999999999999999999876 6788999999999999999999999999999999655467999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                       ++..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++......... .      .........+++
T Consensus       145 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~-~------~~~~~~~~~p~~  216 (257)
T 3imf_A          145 -YAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISE-E------MAKRTIQSVPLG  216 (257)
T ss_dssp             -GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------C------CSHHHHTTSTTC
T ss_pred             -hhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCH-H------HHHHHHhcCCCC
Confidence             6778888999999999999999999999997 779999999999999997543211000 0      011122233456


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ++..|++++..+.||+++...+.+|..+..||++..
T Consensus       217 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  252 (257)
T 3imf_A          217 RLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHL  252 (257)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTS
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECCCccc
Confidence            777888888888899999887888888888887743

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=5.7e-43  Score=333.84  Aligned_cols=255  Identities=19%  Similarity=0.215  Sum_probs=211.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+                 
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   86 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-----------------   86 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-----------------
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh-----------------
Confidence            46889999999999999999999999999999999987            6777777766654                 


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      .+.++.++++|++|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|+++++++++|.|++
T Consensus        87 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~  166 (299)
T 3t7c_A           87 LGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMA  166 (299)
T ss_dssp             TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence            34679999999999999999999999999999999999999764345889999999999999999999999999999988


Q ss_pred             CCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhh-h
Q 016493          197 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-I  275 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~  275 (388)
                      +++.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ..+... .
T Consensus       167 ~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~  243 (299)
T 3t7c_A          167 GKRGGSIVFTSSI-GGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTY--RMFRPDLE  243 (299)
T ss_dssp             TTSCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH--HHHCTTSS
T ss_pred             cCCCcEEEEECCh-hhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchh--hhhhhhhc
Confidence            7567999999998 67888899999999999999999999999999999999999999999987532110  000000 0


Q ss_pred             ccCHHHHH--HHHh----hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          276 CELPETVA--RTLV----PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       276 ~~~pe~vA--~~~l----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ....++..  ....    .++..|+|++..+.||+++...+++|..+..||++.
T Consensus       244 ~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          244 NPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             SCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            00111110  0011    345678888999999999998888888888888764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-43  Score=330.69  Aligned_cols=249  Identities=19%  Similarity=0.228  Sum_probs=213.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   70 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-----------------TGRRALSVGTDIT   70 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            47899999999999999999999999999999999999999988888765                 3467899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||......++.+.+.++|++++++|+.++++++++++|.|+++  +|+||++||.
T Consensus        71 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~  148 (264)
T 3ucx_A           71 DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSM  148 (264)
T ss_dssp             CHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcc
Confidence            99999999999999999999999999986446889999999999999999999999999999999876  3899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH-----H
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----R  284 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA-----~  284 (388)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+.........    ......+++..     .
T Consensus       149 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  223 (264)
T 3ucx_A          149 -VVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQA----GKYGTSVEDIYNAAAAG  223 (264)
T ss_dssp             -GGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHH----HHTTCCHHHHHHHHHTT
T ss_pred             -hhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhh----hhcCCCHHHHHHHHhcc
Confidence             6778888999999999999999999999999999999999999999998643221100    00111222222     2


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++++..|+|++..+.||+++...+.+|+.+..||++
T Consensus       224 ~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          224 SDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGE  261 (264)
T ss_dssp             SSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            34567788999999999999998888888888888776

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.8e-43  Score=331.59  Aligned_cols=250  Identities=22%  Similarity=0.338  Sum_probs=211.4

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~   80 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--------------------GSKAFGVRV   80 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--------------------CTTEEEEEC
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEe
Confidence            447889999999999999999999999999999999999998887766553                    246888999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++
T Consensus        81 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~i  158 (277)
T 4dqx_A           81 DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIINT  158 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence            999999999999999999999999999999977 6788999999999999999999999999999999987 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......... ...   .........+
T Consensus       159 sS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~-~~~---~~~~~~~~~~  233 (277)
T 4dqx_A          159 TSY-TATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKD-PAK---LRSDFNARAV  233 (277)
T ss_dssp             CCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSC-HHH---HHHHHHTTST
T ss_pred             Cch-hhCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccc-hhH---HHHHHHhcCc
Confidence            998 67888899999999999999999999999999999999999999999984321100000 000   0011222344


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++++..|++++..+.||+++...+.+|..+..||++.
T Consensus       234 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (277)
T 4dqx_A          234 MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSS  270 (277)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchh
Confidence            5677788888888899999988888888888888774

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3e-43  Score=334.87  Aligned_cols=251  Identities=21%  Similarity=0.268  Sum_probs=215.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                ...++.++++
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~   98 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----------------GAGNVIGVRL   98 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----------------SSSCEEEEEC
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----------------CCCcEEEEEE
Confidence            356789999999999999999999999999999999999999988887776441                1257899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++
T Consensus        99 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~i  176 (293)
T 3rih_A           99 DVSDPGSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILT  176 (293)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEE
T ss_pred             eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            999999999999999999999999999999987 6788999999999999999999999999999999987 47999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||..+...+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          .......+
T Consensus       177 sS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~----------~~~~~~~p  246 (293)
T 3rih_A          177 SSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYI----------SGMARSIP  246 (293)
T ss_dssp             CCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHH----------HHHHTTST
T ss_pred             eChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHH----------HHHHhcCC
Confidence            99833347888999999999999999999999999999999999999999997643221100          11112234


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      ++++..|++++..+.||+++...+.+|..+..||++..+
T Consensus       247 ~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          247 MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCB
T ss_pred             CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCC
Confidence            567778888888889999999888888888888887543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.5e-43  Score=330.79  Aligned_cols=254  Identities=19%  Similarity=0.259  Sum_probs=215.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++++...              ...++.++++|
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~D   71 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA--------------NGGAIRYEPTD   71 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC--------------SSCEEEEEECC
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC--------------CCceEEEEeCC
Confidence            3578999999999999999999999999999999999999999888887764211              12378999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        72 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~is  150 (281)
T 3svt_A           72 ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGIS  150 (281)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            9999999999999999999999999999984446788999999999999999999999999999999987 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........  ..      ........++
T Consensus       151 S~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--~~------~~~~~~~~p~  221 (281)
T 3svt_A          151 SI-AASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESA--EL------SSDYAMCTPL  221 (281)
T ss_dssp             CH-HHHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCH--HH------HHHHHHHCSS
T ss_pred             CH-HHcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCH--HH------HHHHHhcCCC
Confidence            98 677788889999999999999999999999999999999999999999864321100  00      0112233456


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      +++..|+|++..+.||+++...+.++..+..||++...
T Consensus       222 ~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          222 PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            67778888898889999998878888888888887543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.2e-43  Score=332.03  Aligned_cols=245  Identities=21%  Similarity=0.362  Sum_probs=211.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                 +.++.++.+|+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~Dv   86 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-----------------GLEGRGAVLNV   86 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----------------TCCCEEEECCT
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----------------CCcEEEEEEeC
Confidence            4678999999999999999999999999999999999999998888877652                 35688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||
T Consensus        87 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  164 (270)
T 3ftp_A           87 NDATAVDALVESTLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITS  164 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECc
Confidence            9999999999999999999999999999977 5788899999999999999999999999999999887 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........          ......+++
T Consensus       165 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~----------~~~~~~p~~  233 (270)
T 3ftp_A          165 V-VGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQT----------ALKTQIPLG  233 (270)
T ss_dssp             H-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHH----------HHHTTCTTC
T ss_pred             h-hhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHH----------HHHhcCCCC
Confidence            7 67778889999999999999999999999999999999999999999986432211100          011122345


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++..|++++..+.||+++...+.+|..+..||++.
T Consensus       234 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          234 RLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcc
Confidence            66677888888889998888778888888887763

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.2e-42  Score=324.70  Aligned_cols=251  Identities=22%  Similarity=0.315  Sum_probs=212.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~   63 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--------------------GPAAYAVQMDV   63 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCT
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCCceEEEeeC
Confidence            3578999999999999999999999999999999999999887776654                    24578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++++.|+||++||
T Consensus        64 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  142 (259)
T 4e6p_A           64 TRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMAS  142 (259)
T ss_dssp             TCHHHHHHHHHHHHHHSSSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence            9999999999999999999999999999976 678899999999999999999999999999999988755799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc-C-HHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-L-PETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~-pe~vA~~~  286 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+.......... ....... . .......+
T Consensus       143 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p  220 (259)
T 4e6p_A          143 Q-AGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFAR-YENRPRGEKKRLVGEAVP  220 (259)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHH-HHTCCTTHHHHHHHHHST
T ss_pred             h-hhccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhh-hccCChHHHHHHHhccCC
Confidence            8 67888899999999999999999999999999999999999999999986432110000 0000000 0 11123345


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|+|++..+.||+++...+.+|..+..||++
T Consensus       221 ~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          221 FGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             TSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             CCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcCh
Confidence            678889999999999999998888888888887775

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1e-42  Score=328.61  Aligned_cols=249  Identities=22%  Similarity=0.329  Sum_probs=212.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   84 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--------------------GCGAAACRVDV   84 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--------------------CSSCEEEECCT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCcceEEEecC
Confidence            4688999999999999999999999999999999999998887766554                    24678899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        85 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS  162 (277)
T 3gvc_A           85 SDEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSS  162 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            9999999999999999999999999999986 6788999999999999999999999999999999987 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+...........   ......+.....+++
T Consensus       163 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  238 (277)
T 3gvc_A          163 L-AGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGA---LGAGGARSMIARLQG  238 (277)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHS
T ss_pred             h-hhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhh---HHHHhhhhhhhcccc
Confidence            8 678888999999999999999999999999999999999999999999864321100000   001112233356677


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++..|+|++..+.||+++...+.+|+.+..||++.
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  273 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTI  273 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECCcch
Confidence            88899999999999999998888888888888874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=4.3e-43  Score=329.26  Aligned_cols=242  Identities=21%  Similarity=0.322  Sum_probs=201.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++||++|||||++|||+++|++|+++|++|++.+|+.++++++.+++                    +.++.++++|
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D   81 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL--------------------GKDVFVFSAN   81 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CSSEEEEECC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEee
Confidence            46789999999999999999999999999999999999998887765443                    3568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++|
T Consensus        82 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~is  159 (266)
T 3grp_A           82 LSDRKSIKQLAEVAEREMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINIT  159 (266)
T ss_dssp             TTSHHHHHHHHHHHHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEEC
Confidence            99999999999999999999999999999976 5788899999999999999999999999999999887 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........          ......++
T Consensus       160 S~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~----------~~~~~~p~  228 (266)
T 3grp_A          160 SI-VGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKE----------AIMAMIPM  228 (266)
T ss_dssp             CC--------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHH----------HHHTTCTT
T ss_pred             CH-HHcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHH----------HHHhcCCC
Confidence            98 67788889999999999999999999999999999999999999999986543211110          11122345


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++..|+|++..+.||+++...+.+|..+..||++
T Consensus       229 ~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          229 KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            67778888888889999998888888888888876

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=3.2e-43  Score=331.94  Aligned_cols=249  Identities=22%  Similarity=0.275  Sum_probs=214.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++++|+
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv   86 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA----------------TGRRCLPLSMDV   86 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEECCT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcEEEEEcCC
Confidence            4588999999999999999999999999999999999999988888877653                246789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS  164 (277)
T 4fc7_A           87 RAPPAVMAAVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNITA  164 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECc
Confidence            9999999999999999999999999999876 6788999999999999999999999999999999876 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...........       ........+++
T Consensus       165 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-------~~~~~~~~p~~  236 (277)
T 4fc7_A          165 T-LGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQAS-------LSTKVTASPLQ  236 (277)
T ss_dssp             S-HHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHH-------HHHHHHTSTTS
T ss_pred             h-hhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHH-------HHHHhccCCCC
Confidence            8 677788889999999999999999999999999999999999999998642211100000       01222334567


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       237 r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~  271 (277)
T 4fc7_A          237 RLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAW  271 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHH
T ss_pred             CCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcc
Confidence            88889999999999999988888888888888763

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=6.5e-43  Score=324.04  Aligned_cols=242  Identities=23%  Similarity=0.383  Sum_probs=207.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.+|++|||||++|||+++|++|+++|++|++++| +.++++++.+++++                 .+.++.++++|++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   64 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA-----------------KGVDSFAIQANVA   64 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTSCEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            56899999999999999999999999999999877 56777777777655                 3467889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||.
T Consensus        65 d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  142 (246)
T 3osu_A           65 DADEVKAMIKEVVSQFGSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSV  142 (246)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcch
Confidence            999999999999999999999999999977 5788999999999999999999999999999999887 57999999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........          ......++++
T Consensus       143 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~----------~~~~~~p~~r  211 (246)
T 3osu_A          143 -VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKE----------QMLTQIPLAR  211 (246)
T ss_dssp             -HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHH----------HHHTTCTTCS
T ss_pred             -hhcCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHH----------HHHhcCCCCC
Confidence             66778888999999999999999999999999999999999999999986543211111          1111234566


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +..|+|++..+.||+++...+.+|..+..||++
T Consensus       212 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          212 FGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            777888888888999988877777777777775

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=8e-43  Score=329.98  Aligned_cols=252  Identities=25%  Similarity=0.355  Sum_probs=206.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++.+|++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+.                .+.++.++++|
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   84 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL----------------SSGTVLHHPAD   84 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT----------------CSSCEEEECCC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc----------------cCCcEEEEeCC
Confidence            4678999999999999999999999999999999999 666777766666432                24678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        85 v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~is  162 (281)
T 3v2h_A           85 MTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIA  162 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHTSSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            99999999999999999999999999999977 6788999999999999999999999999999999987 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH------
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET------  281 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~------  281 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+...........    ....+++      
T Consensus       163 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~----~~~~~~~~~~~~~  237 (281)
T 3v2h_A          163 SA-HGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQART----RGITEEQVINEVM  237 (281)
T ss_dssp             CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------------------------
T ss_pred             Cc-ccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhh----cCCCHHHHHHHHH
Confidence            98 678888999999999999999999999999999999999999999999875432211100    0001111      


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ....+++++..|+|++..+.||+++...+.+|..+..||+|.
T Consensus       238 ~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          238 LKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             --CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             HhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCcc
Confidence            122345677888999999999999988888888888888874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.7e-43  Score=332.80  Aligned_cols=251  Identities=24%  Similarity=0.302  Sum_probs=210.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++++|+
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv   82 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-----------------AGHDVDGSSCDV   82 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTCCEEEEECCT
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEECCC
Confidence            456899999999999999999999999999999999999999888887754                 346789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHH--HHHcCCCCcEEEEe
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR--VMRDQPKGGHIFNM  206 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp--~m~~~~~~g~Iv~i  206 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|  .|+++ +.|+||++
T Consensus        83 ~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-~~g~iV~i  160 (279)
T 3sju_A           83 TSTDEVHAAVAAAVERFGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVNI  160 (279)
T ss_dssp             TCHHHHHHHHHHHHHHHCSCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-TCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-CCcEEEEE
Confidence            9999999999999999999999999999977 68889999999999999999999999999999  57766 46999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH---
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA---  283 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA---  283 (388)
                      ||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........    ......+++..   
T Consensus       161 sS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~~~~~  235 (279)
T 3sju_A          161 AST-GGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYA----RHWGVTEQEVHERF  235 (279)
T ss_dssp             CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCC----SSSCCCHHHHHHHH
T ss_pred             CCh-hhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhh----hcccCChHHHHHHH
Confidence            998 6788889999999999999999999999999999999999999999998643211000    00000112221   


Q ss_pred             --HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          284 --RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       284 --~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                        ..+++++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       236 ~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          236 NAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence              2345677888999999999999998888888888888763

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-42  Score=326.26  Aligned_cols=248  Identities=19%  Similarity=0.256  Sum_probs=209.9

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ...++++||++|||||++|||+++|++|+++|++|++++|+ +++++..+++.+                 .+.++.+++
T Consensus        24 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~-----------------~~~~~~~~~   85 (273)
T 3uf0_A           24 TGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD-----------------GGGSAEAVV   85 (273)
T ss_dssp             -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHT-----------------TTCEEEEEE
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHh-----------------cCCcEEEEE
Confidence            34578999999999999999999999999999999999976 445555555543                 346789999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|.++++++.+ ..++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||+
T Consensus        86 ~Dv~d~~~v~~~~~-~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~  162 (273)
T 3uf0_A           86 ADLADLEGAANVAE-ELAATRRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVT  162 (273)
T ss_dssp             CCTTCHHHHHHHHH-HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             ecCCCHHHHHHHHH-HHHhcCCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence            99999999999955 4566799999999999987 6888999999999999999999999999999999987 4799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ..+.....
T Consensus       163 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~------~~~~~~~~  233 (273)
T 3uf0_A          163 IASM-LSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD--DER------AAEITARI  233 (273)
T ss_dssp             ECCG-GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--HHH------HHHHHHHS
T ss_pred             Ecch-HhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC--HHH------HHHHHhcC
Confidence            9998 67888899999999999999999999999999999999999999999985432110  000      11223345


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +++++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       234 p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          234 PAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            66788899999999999999988888888888888864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-42  Score=328.22  Aligned_cols=254  Identities=19%  Similarity=0.218  Sum_probs=208.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+                 
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   68 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK-----------------   68 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-----------------
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHh-----------------
Confidence            46899999999999999999999999999999999997            5556655555543                 


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++
T Consensus        69 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~  147 (281)
T 3s55_A           69 TGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIK  147 (281)
T ss_dssp             TTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999987 678899999999999999999999999999999988


Q ss_pred             CCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhc
Q 016493          197 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC  276 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  276 (388)
                      + +.|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+....... .........
T Consensus       148 ~-~~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~  224 (281)
T 3s55_A          148 R-NYGRIVTVSSM-LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVF-GTMRPDLEK  224 (281)
T ss_dssp             H-TCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHH-HC-------
T ss_pred             c-CCCEEEEECCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhh-ccccccccc
Confidence            7 47999999998 67788889999999999999999999999999999999999999999986531100 000000000


Q ss_pred             cCHHHHHH------HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          277 ELPETVAR------TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       277 ~~pe~vA~------~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ...+....      ....++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~  277 (281)
T 3s55_A          225 PTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT  277 (281)
T ss_dssp             CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            01111111      011455678888888899999988788888888888764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.7e-42  Score=325.76  Aligned_cols=250  Identities=24%  Similarity=0.316  Sum_probs=210.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++++                 .+.++.++++|
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   76 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-----------------LGSDAIAIKAD   76 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECC
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcC
Confidence            4689999999999999999999999999999999775 45667777776654                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++   .|+||++|
T Consensus        77 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~is  152 (270)
T 3is3_A           77 IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTS  152 (270)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEe
Confidence            99999999999999999999999999999986 688899999999999999999999999999999975   58999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH-----H
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-----V  282 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-----v  282 (388)
                      |..+...+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...........   .....+++     .
T Consensus       153 S~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~~~~~~~  229 (270)
T 3is3_A          153 SNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN---GTSYTAEQRQQMAA  229 (270)
T ss_dssp             CTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTT---GGGSCHHHHHHHHH
T ss_pred             CchhccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhcccc---ccccchHHHHHHHH
Confidence            985466788899999999999999999999999999999999999999999865321110000   00011222     2


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...+++++..|+|++..+.||+++...+.+|..+..||++
T Consensus       230 ~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          230 HASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            2345677888999999999999999888888888888775

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.9e-43  Score=329.72  Aligned_cols=244  Identities=24%  Similarity=0.388  Sum_probs=198.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .|+++||++|||||++|||+++|++|+++|++|++. .|+.+.++++.+++.+                 .+.++.++++
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~   84 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-----------------AGGKALTAQA   84 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEEc
Confidence            467789999999999999999999999999999987 5667777777776654                 3467899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|++   .|+||++
T Consensus        85 Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~i  160 (267)
T 3u5t_A           85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINM  160 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEE
Confidence            999999999999999999999999999999986 688899999999999999999999999999999974   4899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........         .......+
T Consensus       161 sS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---------~~~~~~~p  230 (267)
T 3u5t_A          161 STS-QVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVR---------DRFAKLAP  230 (267)
T ss_dssp             CCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CH---------HHHHTSST
T ss_pred             eCh-hhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHH---------HHHHhcCC
Confidence            987 56677888999999999999999999999999999999999999999986542211100         01111234


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.||+++...+.+|+.+..||++
T Consensus       231 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          231 LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            566777888888888999988878888888888776

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-42  Score=327.43  Aligned_cols=246  Identities=22%  Similarity=0.306  Sum_probs=196.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+                 .+.++.++++|+
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv   88 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-----------------LGARVIFLRADL   88 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEecC
Confidence            578999999999999999999999999999999995 77778777777754                 346799999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCC-CCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFN  205 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~  205 (388)
                      +|+++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.|+++++++++|.|++++  ..|+||+
T Consensus        89 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~  168 (280)
T 4da9_A           89 ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIIN  168 (280)
T ss_dssp             TSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            9999999999999999999999999999831 257888999999999999999999999999999998753  2689999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH-H
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-R  284 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA-~  284 (388)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          ..... .
T Consensus       169 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----------~~~~~~~  237 (280)
T 4da9_A          169 ITSV-SAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYD----------GLIESGL  237 (280)
T ss_dssp             ECCC--------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------
T ss_pred             Ecch-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHH----------HHHhhcC
Confidence            9998 6778888999999999999999999999999999999999999999998654321110          01111 3


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+++++..|+|++..+.||+++...+.+|+.+..||++.
T Consensus       238 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          238 VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             ----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            466778888999999999999998888998898888874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=4.2e-42  Score=319.82  Aligned_cols=238  Identities=15%  Similarity=0.208  Sum_probs=207.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..                +.++.++.+|+
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~D~   71 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET----------------GRQPQWFILDL   71 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----------------SCCCEEEECCT
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----------------CCCceEEEEec
Confidence            46899999999999999999999999999999999999999998888876642                23678899999


Q ss_pred             --CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          129 --CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       129 --s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                        +|.++++++++++.+++|++|+||||||+..+..++.+.++++|++++++|+.++++++++++|.|+++ +.|+||++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~i  150 (252)
T 3f1l_A           72 LTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFT  150 (252)
T ss_dssp             TTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEE
T ss_pred             ccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEE
Confidence              999999999999999999999999999986545788999999999999999999999999999999987 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++........          .        
T Consensus       151 sS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~----------~--------  210 (252)
T 3f1l_A          151 SSS-VGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTE----------D--------  210 (252)
T ss_dssp             CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTC----------C--------
T ss_pred             CCh-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCcc----------c--------
Confidence            998 678888999999999999999999999999987 99999999999999853211100          1        


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..++..|++++..+.||+++...+.+|..+..||++.
T Consensus       211 ~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~  247 (252)
T 3f1l_A          211 PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRK  247 (252)
T ss_dssp             GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC--
T ss_pred             hhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcC
Confidence            1245678888888899999988888888888888763

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.3e-42  Score=324.08  Aligned_cols=243  Identities=20%  Similarity=0.312  Sum_probs=207.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .++++||++|||||++|||+++|++|+++|++|++++|+ .++++++.+++++                 .+.++.++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~   88 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-----------------AGGRAVAIRA   88 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEC
Confidence            357899999999999999999999999999999998665 5667777666654                 3467899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   .|+||++
T Consensus        89 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~i  164 (271)
T 3v2g_A           89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITI  164 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEE
Confidence            999999999999999999999999999999977 688899999999999999999999999999999964   5899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||..+...+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........           .....+.+
T Consensus       165 sS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~-----------~~~~~~~~  233 (271)
T 3v2g_A          165 GSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA-----------EAQRERIA  233 (271)
T ss_dssp             CCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH-----------HHHHHTCT
T ss_pred             eChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH-----------HHHHhcCC
Confidence            9874555557889999999999999999999999999999999999999999865422110           11122334


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.||+++...+.+|..+..||++
T Consensus       234 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          234 TGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            566778888888888999998888888888888876

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=6.4e-43  Score=328.59  Aligned_cols=241  Identities=23%  Similarity=0.385  Sum_probs=205.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ++++||++|||||++|||+++|++|+++|++|++++| +.+.++++.+++.+                 .+.++.++++|
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   86 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-----------------AGGEAFAVKAD   86 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECC
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------cCCcEEEEECC
Confidence            5789999999999999999999999999999999988 66777777666654                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        87 ~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~is  164 (269)
T 4dmm_A           87 VSQESEVEALFAAVIERWGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIA  164 (269)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEC
Confidence            99999999999999999999999999999987 5788899999999999999999999999999999887 479999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......   .          ......++
T Consensus       165 S~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~----------~~~~~~p~  230 (269)
T 4dmm_A          165 SV-VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA---E----------KLLEVIPL  230 (269)
T ss_dssp             CH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH---H----------HHGGGCTT
T ss_pred             ch-hhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH---H----------HHHhcCCC
Confidence            97 6677888899999999999999999999999999999999999999998643211   0          01112234


Q ss_pred             hhhhhccccccceeeccCH-HHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~  322 (388)
                      +++..|+|++..+.||+++ ...+++|..+..||++
T Consensus       231 ~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          231 GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTS
T ss_pred             CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCe
Confidence            5566677777777788776 6666777777777775

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-42  Score=324.30  Aligned_cols=244  Identities=20%  Similarity=0.286  Sum_probs=208.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++.+|+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   66 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--------------------GRGAVHHVVDL   66 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--------------------CTTCEEEECCT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCCeEEEECCC
Confidence            4688999999999999999999999999999999999999887766554                    24578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +|+++++++++++.+++|++|+||||||+..+ ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++|
T Consensus        67 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~is  145 (271)
T 3tzq_B           67 TNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNIS  145 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEC
Confidence            99999999999999999999999999998732 4567889999999999999999999999999999987 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+........   ..      .......++
T Consensus       146 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~------~~~~~~~~~  215 (271)
T 3tzq_B          146 SA-TAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP---IV------DIFATHHLA  215 (271)
T ss_dssp             CG-GGTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH---HH------HHHHTTSTT
T ss_pred             CH-HHcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH---HH------HHHHhcCCC
Confidence            98 678888999999999999999999999999999999999999999999865321110   00      011112345


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       216 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  251 (271)
T 3tzq_B          216 GRIGEPHEIAELVCFLASDRAAFITGQVIAADSGLL  251 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCcc
Confidence            667788888888899999998888888888888854

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.1e-42  Score=327.90  Aligned_cols=254  Identities=17%  Similarity=0.248  Sum_probs=200.3

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHHhhhhhhcCCCCc
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSK  113 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~  113 (388)
                      ....+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+              
T Consensus         6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------------   71 (278)
T 3sx2_A            6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED--------------   71 (278)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH--------------
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh--------------
Confidence            34567899999999999999999999999999999999987            6667766666544              


Q ss_pred             ccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHH
Q 016493          114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV  193 (388)
Q Consensus       114 ~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~  193 (388)
                         .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..+    +.++|++++++|+.++++++++++|.
T Consensus        72 ---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~  143 (278)
T 3sx2_A           72 ---IGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-MSA----GDDGWHDVIDVNLTGVYHTIKVAIPT  143 (278)
T ss_dssp             ---HTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CSS----THHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ---cCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCC----CHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence               2467999999999999999999999999999999999999865 222    58999999999999999999999999


Q ss_pred             HHcCCCCcEEEEecCCCCCCCCC----CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh
Q 016493          194 MRDQPKGGHIFNMDGAGSGGSST----PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK  269 (388)
Q Consensus       194 m~~~~~~g~Iv~isS~~~~~~~~----~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  269 (388)
                      |++++..|+||++||. ++..+.    ++...|++||+|+++|+++++.|++++||+||+|+||+|+||+..........
T Consensus       144 ~~~~~~~g~iv~isS~-~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~  222 (278)
T 3sx2_A          144 LVKQGTGGSIVLISSS-AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWL  222 (278)
T ss_dssp             HHHHCSCEEEEEECCG-GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHH
T ss_pred             HHhCCCCcEEEEEccH-HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHH
Confidence            9887557999999997 555555    67788999999999999999999999999999999999999987532110000


Q ss_pred             hhhhhhccCHHHH-HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          270 QMFNIICELPETV-ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       270 ~~~~~~~~~pe~v-A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .........+... ...+ .++..|+|++..+.||+++...+.+|..+..||+|.
T Consensus       223 ~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          223 AKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             hhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            0000000000000 0011 345567777888889999888888888888888874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.9e-42  Score=329.04  Aligned_cols=254  Identities=24%  Similarity=0.329  Sum_probs=211.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+                 
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  104 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE-----------------  104 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH-----------------
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh-----------------
Confidence            46889999999999999999999999999999999886            6666666665544                 


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++
T Consensus       105 ~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  183 (317)
T 3oec_A          105 QGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIE  183 (317)
T ss_dssp             TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999987 578899999999999999999999999999999998


Q ss_pred             CCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhh-h
Q 016493          197 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-I  275 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~  275 (388)
                      ++..|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++......  ...+... .
T Consensus       184 ~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~  260 (317)
T 3oec_A          184 RGQGGSVIFVSST-VGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKL--LKMFLPHLE  260 (317)
T ss_dssp             TCSCEEEEEECCG-GGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHH--HHHHCTTCS
T ss_pred             cCCCCEEEEECcH-HhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhh--hhhhhhhcc
Confidence            7567999999998 6788889999999999999999999999999999999999999999998642110  0000000 0


Q ss_pred             ccCHHHHHHHHh------hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          276 CELPETVARTLV------PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       276 ~~~pe~vA~~~l------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ....++..+...      .++..|+|++..+.||+++...+++|..+..||++.
T Consensus       261 ~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          261 NPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             SCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            111222222110      344578888888899999998888888888888874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.5e-42  Score=323.52  Aligned_cols=245  Identities=18%  Similarity=0.280  Sum_probs=207.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++++|++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~   64 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF--------------------GPRVHALRSDIA   64 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCcceEEEccCC
Confidence            578999999999999999999999999999999999998887766554                    246889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   .|+||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~  140 (255)
T 4eso_A           65 DLNEIAVLGAAAGQTLGAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSV  140 (255)
T ss_dssp             CHHHHHHHHHHHHHHHSSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECCh
Confidence            999999999999999999999999999977 688999999999999999999999999999999975   4899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+......... .....   ........++++
T Consensus       141 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~---~~~~~~~~p~~r  215 (255)
T 4eso_A          141 -ADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEA-ERAEF---KTLGDNITPMKR  215 (255)
T ss_dssp             -GGSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHH-HHHHH---HHHHHHHSTTSS
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChh-hHHHH---HHHHhccCCCCC
Confidence             6788889999999999999999999999999999999999999999998643211110 00000   011122345667


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +..|+|++..+.||+++ ..+.+|..+..||++..
T Consensus       216 ~~~pedvA~~v~~L~s~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          216 NGTADEVARAVLFLAFE-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             CBCHHHHHHHHHHHHHT-CTTCCSCEEEESTTTTT
T ss_pred             CcCHHHHHHHHHHHcCc-CcCccCCEEEECCCccc
Confidence            77888888888899887 66788888888888743

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=6e-42  Score=321.45  Aligned_cols=249  Identities=21%  Similarity=0.290  Sum_probs=210.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+               +..+..+.+|+
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---------------~~~~~~~~~D~   70 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP---------------DAILQPVVADL   70 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT---------------TCEEEEEECCT
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC---------------CceEEEEecCC
Confidence            578999999999999999999999999999999999999999998888876422               35788999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|++++++++    ++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        71 ~~~~~~~~~~----~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS  144 (267)
T 3t4x_A           71 GTEQGCQDVI----EKYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIAS  144 (267)
T ss_dssp             TSHHHHHHHH----HHCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECC
T ss_pred             CCHHHHHHHH----HhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcc
Confidence            9999987765    45789999999999987 5788899999999999999999999999999999987 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH---
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART---  285 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~---  285 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||.++|++.......    .......++++..+.   
T Consensus       145 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~  219 (267)
T 3t4x_A          145 E-AAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNS----LYPNEQLTIEEAEKRFMK  219 (267)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHH----SSTTSCCCHHHHHHHHHH
T ss_pred             h-hhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhh----cCcccCCCHHHHHHHHhh
Confidence            8 67888899999999999999999999999999999999999999999975431110    000001122222222   


Q ss_pred             ------HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          286 ------LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       286 ------~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                            +++++..|+|++..+.||+++...+.+|+.+..||++.
T Consensus       220 ~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          220 ENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             HHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             ccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence                  24677889999999999999998888999999888874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=3.4e-43  Score=329.20  Aligned_cols=249  Identities=22%  Similarity=0.310  Sum_probs=203.0

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCce
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK  120 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  120 (388)
                      .+.+.++++||++|||||++|||+++|++|+++|++|++++|+   .++++++.+++.+                 .+.+
T Consensus         2 ~~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------~~~~   64 (262)
T 3ksu_A            2 SLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED-----------------QGAK   64 (262)
T ss_dssp             --CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT-----------------TTCE
T ss_pred             CCccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh-----------------cCCc
Confidence            3455678999999999999999999999999999999998765   4455555555543                 3468


Q ss_pred             EEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 016493          121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  200 (388)
Q Consensus       121 i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  200 (388)
                      +.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+   +.
T Consensus        65 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~  140 (262)
T 3ksu_A           65 VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PN  140 (262)
T ss_dssp             EEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE---EE
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc---CC
Confidence            999999999999999999999999999999999999987 57889999999999999999999999999999994   35


Q ss_pred             cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH
Q 016493          201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  280 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  280 (388)
                      |+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.........         ...
T Consensus       141 g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---------~~~  210 (262)
T 3ksu_A          141 GHIITIATS-LLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---------TAF  210 (262)
T ss_dssp             EEEEEECCC-HHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------
T ss_pred             CEEEEEech-hhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---------HHH
Confidence            899999987 5666778888999999999999999999999999999999999999998654221110         111


Q ss_pred             HHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          281 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       281 ~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      .....+++++..|++++..+.||+++ ..+.+|..+..||++..
T Consensus       211 ~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          211 HKSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT  253 (262)
T ss_dssp             -----CCCCSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCCC
T ss_pred             HHhcCcccCCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCccC
Confidence            22344567788999999999999998 77888888988888754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-42  Score=321.15  Aligned_cols=251  Identities=22%  Similarity=0.344  Sum_probs=206.1

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+                 .+.++.++++
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~   77 (273)
T 1ae1_A           15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-----------------KGLNVEGSVC   77 (273)
T ss_dssp             -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEC
Confidence            34678999999999999999999999999999999999999988887777654                 2356889999


Q ss_pred             cCCCHHHHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          127 DVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      |++|+++++++++++.+.+ +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||+
T Consensus        78 D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~  155 (273)
T 1ae1_A           78 DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIF  155 (273)
T ss_dssp             CTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            9999999999999999999 99999999999976 5788899999999999999999999999999999876 4699999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch--hhhhhhhhccCHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--NKQMFNIICELPETVA  283 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~pe~vA  283 (388)
                      +||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+||+........  ....      ......
T Consensus       156 isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~------~~~~~~  228 (273)
T 1ae1_A          156 LSSI-AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEE------IDNFIV  228 (273)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHH------HHHHHH
T ss_pred             EcCH-hhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHH------HHHHHh
Confidence            9998 677788889999999999999999999999999999999999999999864321100  0000      011122


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..+++++..|++++..+.||+++...+.++..+..||++.
T Consensus       229 ~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          229 KTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence            2345667788888888889998887777777777777763

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=6.7e-42  Score=323.59  Aligned_cols=252  Identities=22%  Similarity=0.213  Sum_probs=204.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.++++++.++                    .+.++.++++|+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dv   60 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA--------------------HGGNAVGVVGDV   60 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------------------TBTTEEEEECCT
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH--------------------cCCcEEEEEcCC
Confidence            467899999999999999999999999999999999999887665443                    235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcC----CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL----QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~----~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|+++++++++++.+++|++|+||||||+..+..++.    +.+.++|++++++|+.++++++++++|.|+++  +|+||
T Consensus        61 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv  138 (281)
T 3zv4_A           61 RSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVV  138 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEE
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEE
Confidence            9999999999999999999999999999865323332    44567899999999999999999999999875  48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|++.........................
T Consensus       139 ~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (281)
T 3zv4_A          139 FTISN-AGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV  216 (281)
T ss_dssp             EECCG-GGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT
T ss_pred             EEecc-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc
Confidence            99998 678888899999999999999999999999987 9999999999999986542211111000000000111223


Q ss_pred             HHhhhhhhccccccceeeccC-HHHHHHHHHhHhhcCcccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTP-PRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~g~~~~  324 (388)
                      .+++|+..|+|++..+.||++ +...+++|..+..||++..
T Consensus       217 ~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          217 LPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             CTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             CCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            466788999999999999999 7777889999999998854

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.4e-41  Score=315.80  Aligned_cols=241  Identities=26%  Similarity=0.358  Sum_probs=186.6

Q ss_pred             HhhhhhhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           37 TMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        37 ~~~~~~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      .+++..++.....+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               
T Consensus        17 ~l~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------   81 (281)
T 4dry_A           17 NLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT---------------   81 (281)
T ss_dssp             -----------------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------------
T ss_pred             eEEEeccccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------------
Confidence            33444444445567899999999999999999999999999999999999999988888876531               


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                       +..+.++++|++|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|+++++++++|.|++
T Consensus        82 -~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~  160 (281)
T 4dry_A           82 -GNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKA  160 (281)
T ss_dssp             -SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             -CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence             2346889999999999999999999999999999999998764578899999999999999999999999999999998


Q ss_pred             CC-CCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh---hh
Q 016493          197 QP-KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ---MF  272 (388)
Q Consensus       197 ~~-~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~~  272 (388)
                      ++ +.|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...........   ..
T Consensus       161 ~~~~~g~IV~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  239 (281)
T 4dry_A          161 QTPRGGRIINNGSI-SAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVA  239 (281)
T ss_dssp             SSSCCEEEEEECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEE
T ss_pred             cCCCCcEEEEECCH-HhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhccc
Confidence            74 36899999998 678888999999999999999999999999999999999999999999876432211110   00


Q ss_pred             hhhccCHHHHHHHHhhhhhhcc
Q 016493          273 NIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       273 ~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                      .....+||++|+.++..+..+.
T Consensus       240 ~~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          240 AEPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             ECCCBCHHHHHHHHHHHHHSCT
T ss_pred             ccCCCCHHHHHHHHHHHhCCCc
Confidence            1112367888887776554443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=6.1e-42  Score=326.31  Aligned_cols=252  Identities=16%  Similarity=0.123  Sum_probs=210.8

Q ss_pred             hcccCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           46 EEHCKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ...++++||++|||||+|  |||+++|++|+++|++|++++|+.+..+.+.+...+ .                 ..+.+
T Consensus        23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~-----------------~~~~~   84 (296)
T 3k31_A           23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-L-----------------GVKLT   84 (296)
T ss_dssp             CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-H-----------------TCCEE
T ss_pred             cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-c-----------------CCeEE
Confidence            345678999999999996  999999999999999999999997655444333222 1                 24678


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  200 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  200 (388)
                      ++||++|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++.+++|+.++++++++++|.|++   .
T Consensus        85 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~  161 (296)
T 3k31_A           85 VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---G  161 (296)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---C
T ss_pred             EEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C
Confidence            9999999999999999999999999999999998652   267889999999999999999999999999999975   5


Q ss_pred             cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH
Q 016493          201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  280 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  280 (388)
                      |+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ...
T Consensus       162 g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~--~~~------~~~  232 (296)
T 3k31_A          162 GSILTLSYY-GAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF--HYI------LTW  232 (296)
T ss_dssp             EEEEEEECG-GGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH--HHH------HHH
T ss_pred             CEEEEEEeh-hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch--HHH------HHH
Confidence            899999998 67788889999999999999999999999999999999999999999986543211  000      011


Q ss_pred             HHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccccc
Q 016493          281 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQG  327 (388)
Q Consensus       281 ~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~  327 (388)
                      .....+++++..|++++..+.||+++...+.+|..+..||++.....
T Consensus       233 ~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~  279 (296)
T 3k31_A          233 NKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVGM  279 (296)
T ss_dssp             HHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccccCC
Confidence            22334567788889999999999999988899999999999865433

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-42  Score=317.47  Aligned_cols=244  Identities=21%  Similarity=0.302  Sum_probs=206.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++|+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   63 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-----------------KGFKARGLVLNI   63 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEecC
Confidence            467899999999999999999999999999999999999999888877765                 346789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|+++ +.|+||++||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS  141 (247)
T 3lyl_A           64 SDIESIQNFFAEIKAENLAIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGS  141 (247)
T ss_dssp             TCHHHHHHHHHHHHHTTCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcc
Confidence            9999999999999999999999999999987 5788899999999999999999999999999999887 4789999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++............          ....+.+
T Consensus       142 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~----------~~~~~~~  210 (247)
T 3lyl_A          142 V-VGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFI----------ATKIPSG  210 (247)
T ss_dssp             T-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHH----------HTTSTTC
T ss_pred             h-hhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHH----------hhcCCCC
Confidence            8 6777888899999999999999999999999999999999999999998755332111111          1112334


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..|++++..+.||+++...+.+|..+..||++
T Consensus       211 ~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          211 QIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCE
Confidence            4556666666667777777666667777777765

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.4e-40  Score=309.64  Aligned_cols=194  Identities=22%  Similarity=0.276  Sum_probs=170.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++++|+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv   65 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA-----------------AGGRIVARSLDA   65 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECcC
Confidence            467899999999999999999999999999999999999999998888866                 346799999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++ |++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||
T Consensus        66 ~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  142 (252)
T 3h7a_A           66 RNEDEVTAFLNAADAH-APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGA  142 (252)
T ss_dssp             TCHHHHHHHHHHHHHH-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHhh-CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECC
Confidence            9999999999999999 99999999999987 6888999999999999999999999999999999987 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEE-EEEecCcccccccccC
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGV-HTASPGMVLTDLLLSG  263 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~v-n~v~PG~v~T~~~~~~  263 (388)
                      . ++..+.++...|++||+|+++|+++|+.|++++||+| |+|+||+|+|++....
T Consensus       143 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~  197 (252)
T 3h7a_A          143 T-ASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER  197 (252)
T ss_dssp             G-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred             H-HHcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc
Confidence            8 6788889999999999999999999999999999999 9999999999987653

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.4e-41  Score=317.58  Aligned_cols=251  Identities=23%  Similarity=0.332  Sum_probs=206.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+                 .+.++.++++
T Consensus         3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~   65 (260)
T 2ae2_A            3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-----------------KGFKVEASVC   65 (260)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEEC
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEc
Confidence            34678999999999999999999999999999999999999988887777654                 2357889999


Q ss_pred             cCCCHHHHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          127 DVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      |++|+++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||+
T Consensus        66 D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  143 (260)
T 2ae2_A           66 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVF  143 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            9999999999999999999 89999999999876 5778899999999999999999999999999999887 4799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++........  ......   .......
T Consensus       144 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~---~~~~~~~  217 (260)
T 2ae2_A          144 ISSV-SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDP--EQKENL---NKLIDRC  217 (260)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSH--HHHHHH---HHHHHTS
T ss_pred             Ecch-hhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccCh--hhHHHH---HHHHhcC
Confidence            9998 667788889999999999999999999999999999999999999999854211100  000000   0111112


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..|++++..+.|++++...+.++..+..||++
T Consensus       218 ~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          218 ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            3445667777777778888877666666666666665

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.4e-41  Score=317.33  Aligned_cols=250  Identities=22%  Similarity=0.284  Sum_probs=199.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .|++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++++|
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D   63 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI--------------------GDAALAVAAD   63 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECC
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEec
Confidence            46789999999999999999999999999999999999999887766643                    2468899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC---CCcEEE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---KGGHIF  204 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---~~g~Iv  204 (388)
                      ++|.++++++++++.++++++|+||||||+..+..++.+.+.++|++++++|+.++++++++++|.|++++   +.++||
T Consensus        64 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv  143 (261)
T 3n74_A           64 ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVIL  143 (261)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEE
Confidence            99999999999999999999999999999876456778889999999999999999999999999998752   267899


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+++|++............      .......
T Consensus       144 ~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~------~~~~~~~  216 (261)
T 3n74_A          144 NVAST-GAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEI------RKKFRDS  216 (261)
T ss_dssp             EECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------
T ss_pred             EeCch-hhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHH------HHHHhhc
Confidence            99998 6788889999999999999999999999999999999999999999998754321111110      0111223


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      .+++++..|++++..+.||+++...+.+|..+..||++.-
T Consensus       217 ~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  256 (261)
T 3n74_A          217 IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSI  256 (261)
T ss_dssp             CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCccc
Confidence            3455667788888888899998887788888888887643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-41  Score=317.13  Aligned_cols=251  Identities=25%  Similarity=0.378  Sum_probs=208.8

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      .+..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.+++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~   77 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK----------------YGVETMAFR   77 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEE
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCeEEEEE
Confidence            3456789999999999999999999999999999999999999888877776332                235688899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||+
T Consensus        78 ~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~  155 (267)
T 1vl8_A           78 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIIN  155 (267)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            9999999999999999999999999999999976 5788899999999999999999999999999999877 4789999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||...+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++......  .....      .......
T Consensus       156 isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~------~~~~~~~  227 (267)
T 1vl8_A          156 IGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS--DPEKL------DYMLKRI  227 (267)
T ss_dssp             ECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT--CHHHH------HHHHHTC
T ss_pred             ECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc--ChHHH------HHHHhhC
Confidence            999832677778889999999999999999999999999999999999999998532110  00000      0011122


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..|++++..+.||+++...+.+|..+..||++
T Consensus       228 p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          228 PLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            4566778999999999999987766777777777765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-40  Score=309.30  Aligned_cols=222  Identities=25%  Similarity=0.442  Sum_probs=184.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++.+|++|
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d   64 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD-----------------AGGTALAQVLDVTD   64 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------TTCEEEEEECCTTC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence            5789999999999999999999999999999999999999988888765                 34678999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||. 
T Consensus        65 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~-  141 (264)
T 3tfo_A           65 RHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSI-  141 (264)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCH-
Confidence            99999999999999999999999999976 6889999999999999999999999999999999987 57999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh---hhhhhccCHHHHHHHHh
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ---MFNIICELPETVARTLV  287 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~pe~vA~~~l  287 (388)
                      ++..+.++...|++||+|+++|+++|+.|+ + ||+||+|+||+|+|++...........   .......+|+++|+.++
T Consensus       142 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~  219 (264)
T 3tfo_A          142 GALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVR  219 (264)
T ss_dssp             GGTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------CCCHHHHHHHHH
T ss_pred             HHcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHH
Confidence            678888999999999999999999999998 5 999999999999999875432211111   01111246888888777


Q ss_pred             hhhhhcc
Q 016493          288 PRIRVVK  294 (388)
Q Consensus       288 ~~~~~~~  294 (388)
                      ..+..+.
T Consensus       220 ~l~s~~~  226 (264)
T 3tfo_A          220 QVIEAPQ  226 (264)
T ss_dssp             HHHHSCT
T ss_pred             HHhcCCc
Confidence            6665443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1e-41  Score=315.93  Aligned_cols=243  Identities=25%  Similarity=0.394  Sum_probs=199.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++||+++||||++|||+++|++|+++|++|++++| ++++++++.+++++                 .+.++.++++|+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   63 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK-----------------LGSDAIAVRADV   63 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCC
Confidence            357899999999999999999999999999999999 88888877777654                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        64 ~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  141 (246)
T 2uvd_A           64 ANAEDVTNMVKQTVDVFGQVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIAS  141 (246)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECC
Confidence            9999999999999999999999999999876 5778899999999999999999999999999999876 4689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++...........+          ....++.
T Consensus       142 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~----------~~~~p~~  210 (246)
T 2uvd_A          142 V-VGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEM----------LKLIPAA  210 (246)
T ss_dssp             T-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHH----------HHTCTTC
T ss_pred             H-HhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHH----------HhcCCCC
Confidence            7 5666778889999999999999999999999999999999999999998654221110100          0111233


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..|++++..+.|++++...+.++..+..||++
T Consensus       211 ~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          211 QFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            4455666666666777766555555556566554

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5.3e-41  Score=316.09  Aligned_cols=200  Identities=31%  Similarity=0.475  Sum_probs=170.3

Q ss_pred             hhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           42 NMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        42 ~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      ++..+.+.++.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++
T Consensus        17 ~~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~   76 (272)
T 4dyv_A           17 NLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI--------------------GDDA   76 (272)
T ss_dssp             -----------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------TSCC
T ss_pred             eeehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCCe
Confidence            33444445678999999999999999999999999999999999999887776654                    2467


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CC
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KG  200 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~  200 (388)
                      .++++|++|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|+++++++++|.|++++ +.
T Consensus        77 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~  156 (272)
T 4dyv_A           77 LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRG  156 (272)
T ss_dssp             EEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCC
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCC
Confidence            88999999999999999999999999999999999976447889999999999999999999999999999999874 26


Q ss_pred             cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       157 g~IV~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  217 (272)
T 4dyv_A          157 GRIINNGSI-SATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK  217 (272)
T ss_dssp             EEEEEECCS-STTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------
T ss_pred             cEEEEECch-hhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh
Confidence            899999998 7888889999999999999999999999999999999999999999998754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=7.8e-42  Score=321.90  Aligned_cols=193  Identities=21%  Similarity=0.337  Sum_probs=171.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-------HHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++.+                 .+.++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~   64 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA-----------------AGGQG   64 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHH-----------------HTSEE
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHh-----------------cCCeE
Confidence            57899999999999999999999999999999999999764       4555555543                 24679


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      .++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|
T Consensus        65 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g  142 (274)
T 3e03_A           65 LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNP  142 (274)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSC
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCc
Confidence            99999999999999999999999999999999999976 5788899999999999999999999999999999987 579


Q ss_pred             EEEEecCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccccccc
Q 016493          202 HIFNMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLL  261 (388)
Q Consensus       202 ~Iv~isS~~~~~~~--~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG-~v~T~~~~  261 (388)
                      +||++||. ++..+  .++...|++||+|+++|+++++.|++++||+||+|+|| .++|++..
T Consensus       143 ~iv~isS~-~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~  204 (274)
T 3e03_A          143 HILTLAPP-PSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN  204 (274)
T ss_dssp             EEEECCCC-CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----
T ss_pred             eEEEECCh-HhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh
Confidence            99999998 56665  56778999999999999999999999999999999999 69999873

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=6.5e-42  Score=319.85  Aligned_cols=245  Identities=21%  Similarity=0.303  Sum_probs=200.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ++++||++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++++                 .+.++.++++|
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   66 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK-----------------LGRSALAIKAD   66 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT-----------------TTSCCEEEECC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEEcC
Confidence            46889999999999999999999999999999998 6677777777666644                 34578899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||...+..++.+.+.++|++++++|+.|+++++++++|.|++   .|+||++|
T Consensus        67 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~is  143 (259)
T 3edm_A           67 LTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFS  143 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEc
Confidence            999999999999999999999999999998744678899999999999999999999999999999975   58999999


Q ss_pred             CCCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          208 GAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       208 S~~~~~-~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      |. ++. .+.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++........   .      ........+
T Consensus       144 S~-~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~---~------~~~~~~~~p  212 (259)
T 3edm_A          144 SQ-AGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPE---V------RERVAGATS  212 (259)
T ss_dssp             CH-HHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------------
T ss_pred             CH-HhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChH---H------HHHHHhcCC
Confidence            97 444 677888999999999999999999999987 99999999999999865432110   0      111223456


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ++++..|++++..+.||+++...+.+|..+..||++..
T Consensus       213 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          213 LKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             --CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSB
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCC
Confidence            67788899999999999999988888888888887743

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=317.80  Aligned_cols=252  Identities=19%  Similarity=0.292  Sum_probs=205.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   66 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-----------------KGVEARSYVCDVT   66 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTSCEEEEECCTT
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCC
Confidence            57899999999999999999999999999999999999888877776643                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||.
T Consensus        67 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  145 (262)
T 1zem_A           67 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASM  145 (262)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcch
Confidence            99999999999999999999999999987225788899999999999999999999999999999876 46899999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhh-hhccCHH-H----HH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN-IICELPE-T----VA  283 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~pe-~----vA  283 (388)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.............. .....++ .    ..
T Consensus       146 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T 1zem_A          146 -AGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG  224 (262)
T ss_dssp             -HHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred             -hhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHh
Confidence             566777888999999999999999999999999999999999999999854310000000000 0000122 1    12


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcC
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  320 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  320 (388)
                      ..+++++..|++++..+.||+++...+.+|..+..||
T Consensus       225 ~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          225 SVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             TSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence            2356678899999999999999887666665555554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=5.4e-41  Score=313.41  Aligned_cols=249  Identities=24%  Similarity=0.310  Sum_probs=208.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++.+
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   70 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG-----------------EGLSVTGTVC   70 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEc
Confidence            34567899999999999999999999999999999999999988877777654                 2356888999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++
T Consensus        71 D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~i  149 (260)
T 2zat_A           71 HVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIV  149 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            99999999999999999999999999999986434678889999999999999999999999999999887 47899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++.......  ...      ........+
T Consensus       150 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~------~~~~~~~~~  220 (260)
T 2zat_A          150 SSV-GAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD--KAR------KEYMKESLR  220 (260)
T ss_dssp             CCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS--HHH------HHHHHHHHT
T ss_pred             ech-hhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC--hHH------HHHHHhcCC
Confidence            998 67778888999999999999999999999999999999999999999975321000  000      001112234


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.||+++...+.++..+..||++
T Consensus       221 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          221 IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence            567788999999999999987766666666666665

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=2e-41  Score=317.19  Aligned_cols=249  Identities=22%  Similarity=0.296  Sum_probs=203.1

Q ss_pred             cccCCCCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           47 EHCKAGPRNVVITGST-RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        47 ~~~~~~gk~vlITGas-~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ...++++|++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.+++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~   79 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL----------------GLGRVEAVV   79 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------CSSCEEEEE
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc----------------CCCceEEEE
Confidence            3456899999999997 59999999999999999999999999998888777542                235799999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++++.++||+
T Consensus        80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~  158 (266)
T 3o38_A           80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVN  158 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEE
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            9999999999999999999999999999999977 578889999999999999999999999999999998766799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........         .......
T Consensus       159 ~sS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---------~~~~~~~  228 (266)
T 3o38_A          159 NASV-LGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL---------DRLASDE  228 (266)
T ss_dssp             ECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------CC
T ss_pred             eCCH-HHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHH---------HHHHhcC
Confidence            9998 67888889999999999999999999999999999999999999999986543211100         0011122


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..|+|++..+.||+++...+.+|..+..||++
T Consensus       229 ~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          229 AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            3445556666777777787777666666666666654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1e-41  Score=324.38  Aligned_cols=246  Identities=20%  Similarity=0.280  Sum_probs=207.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.  +.++++.+.+++                 .+.++.+++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~  106 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-----------------CGRKAVLLP  106 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-----------------TTCCEEECC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-----------------cCCcEEEEE
Confidence            3568999999999999999999999999999999999873  344444444433                 346789999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|.|++   +|+||+
T Consensus       107 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~  183 (294)
T 3r3s_A          107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIIT  183 (294)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEE
Confidence            99999999999999999999999999999998654577889999999999999999999999999999964   489999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........ ...       .......
T Consensus       184 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~-------~~~~~~~  254 (294)
T 3r3s_A          184 TSSI-QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ-DKI-------PQFGQQT  254 (294)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG-GGS-------TTTTTTS
T ss_pred             ECCh-hhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH-HHH-------HHHHhcC
Confidence            9998 678888999999999999999999999999999999999999999999843221110 000       1111234


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..|+|++..+.||+++...+++|..+..||++
T Consensus       255 p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          255 PMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            5678889999999999999999888888888888876

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=3.2e-41  Score=315.05  Aligned_cols=249  Identities=22%  Similarity=0.267  Sum_probs=200.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++ ++++.+++.+..                +.++.++.+|++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----------------~~~~~~~~~D~~   65 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH----------------GVKVLYDGADLS   65 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH----------------TSCEEEECCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc----------------CCcEEEEECCCC
Confidence            578999999999999999999999999999999999887 777777665421                346888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||.
T Consensus        66 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  143 (260)
T 1x1t_A           66 KGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASA  143 (260)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcH
Confidence            999999999999999999999999999876 5778899999999999999999999999999999876 46999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH------HH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET------VA  283 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~------vA  283 (388)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+||+...........    ...++++      ..
T Consensus       144 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  218 (260)
T 1x1t_A          144 -HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK----NGVDQETAARELLSE  218 (260)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CHHH
T ss_pred             -HhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccc----cCCchHHHHHHHhhc
Confidence             667778889999999999999999999999999999999999999999865321100000    0000011      11


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+++++..|++++..+.|++++...+.++..+..||++
T Consensus       219 ~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          219 KQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             HCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            223456677888888888888877666667677777665

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=7.6e-42  Score=323.85  Aligned_cols=194  Identities=20%  Similarity=0.312  Sum_probs=174.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-------HHHHHHHHHHHHHhhhhhhcCCCCcccccCce
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMMAAGGSSKKNLVHAK  120 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~-------~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  120 (388)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+                 .+.+
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----------------~~~~   66 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-----------------AGGQ   66 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-----------------HTSE
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-----------------cCCc
Confidence            36789999999999999999999999999999999999987       45566666554                 2467


Q ss_pred             EEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 016493          121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  200 (388)
Q Consensus       121 i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  200 (388)
                      +.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.
T Consensus        67 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~  144 (285)
T 3sc4_A           67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-DN  144 (285)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-SS
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CC
Confidence            999999999999999999999999999999999999987 6889999999999999999999999999999999987 57


Q ss_pred             cEEEEecCCCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccccccc
Q 016493          201 GHIFNMDGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLL  261 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG-~v~T~~~~  261 (388)
                      |+||++||. ++..+. ++...|++||+|+++|+++|+.|++++||+||+|+|| .++|++..
T Consensus       145 g~iv~isS~-~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~  206 (285)
T 3sc4_A          145 PHILTLSPP-IRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ  206 (285)
T ss_dssp             CEEEECCCC-CCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHH
T ss_pred             cEEEEECCh-hhccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHH
Confidence            999999998 455554 7789999999999999999999999999999999999 78999864

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-41  Score=314.54  Aligned_cols=250  Identities=24%  Similarity=0.323  Sum_probs=206.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..               .+.++.++++|+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~   73 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA---------------PDAEVLTTVADV   73 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTCCEEEEECCT
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc---------------CCceEEEEEccC
Confidence            46789999999999999999999999999999999999998888777775421               135688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        74 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  152 (267)
T 1iy8_A           74 SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTAS  152 (267)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcc
Confidence            999999999999999999999999999987522678899999999999999999999999999999876 4689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH----H-HH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE----T-VA  283 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe----~-vA  283 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++..........       ...+    . ..
T Consensus       153 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~  224 (267)
T 1iy8_A          153 V-GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-------ENPRKAAEEFIQ  224 (267)
T ss_dssp             G-GGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-------TCHHHHHHHHHT
T ss_pred             h-hhccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccCh-------hhhhhHHHHHhc
Confidence            8 67778888999999999999999999999999999999999999999985421000000       0011    1 11


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+++++..|++++..+.||+++...+.++..+..||++
T Consensus       225 ~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          225 VNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             TCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            123456667888888888888887766677677677665

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.2e-41  Score=319.94  Aligned_cols=247  Identities=22%  Similarity=0.312  Sum_probs=200.1

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      .+.++++||+++||||++|||+++|++|+++|++|++++|+ .+..+++.+++++                 .+.++.++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~   84 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-----------------KGYKAAVI   84 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEE
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCceEEE
Confidence            44678999999999999999999999999999999999995 4445555555543                 34678999


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|++|+++++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|+++ +.|+||
T Consensus        85 ~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv  162 (271)
T 4iin_A           85 KFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVV  162 (271)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEE
Confidence            99999999999999999999999999999999987 5778899999999999999999999999999999987 479999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++............          ...
T Consensus       163 ~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~----------~~~  231 (271)
T 4iin_A          163 NVASI-IGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADY----------VKN  231 (271)
T ss_dssp             EECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------C----------GGG
T ss_pred             EEech-hhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHH----------Hhc
Confidence            99997 6677888899999999999999999999999999999999999999998754322111111          111


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++++..|++++..+.||+++...+.+|..+..||+|
T Consensus       232 ~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          232 IPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            23345556666666667787777766777777777766

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-41  Score=320.98  Aligned_cols=196  Identities=27%  Similarity=0.448  Sum_probs=180.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~---~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      .+++||++|||||++|||+++|++|+++|+   +|++++|+.++++++.+++.+..               .+.++.+++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~   93 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF---------------PNAKVHVAQ   93 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC---------------TTCEEEEEE
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC---------------CCCeEEEEE
Confidence            356899999999999999999999999998   99999999999999888886642               236799999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||+
T Consensus        94 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~  172 (287)
T 3rku_A           94 LDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVN  172 (287)
T ss_dssp             CCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence            999999999999999999999999999999987545778899999999999999999999999999999887 5799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      +||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus       173 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          173 LGSI-AGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL  227 (287)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH
T ss_pred             ECCh-hhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc
Confidence            9998 678888999999999999999999999999999999999999999999853

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-41  Score=311.93  Aligned_cols=239  Identities=22%  Similarity=0.262  Sum_probs=197.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++                      .+.++++|+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~   58 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------GAHPVVMDV   58 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------------TCEEEECCT
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------------------CCEEEEecC
Confidence            3578999999999999999999999999999999999988766543221                      167789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        59 ~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS  136 (245)
T 1uls_A           59 ADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTAS  136 (245)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcc
Confidence            9999999999999999999999999999876 5778899999999999999999999999999999887 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . + ..+.++...|++||+++.+|+++++.|++++||+||+|+||+|+|++..........          ......+++
T Consensus       137 ~-~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----------~~~~~~p~~  204 (245)
T 1uls_A          137 R-V-YLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVRE----------KAIAATPLG  204 (245)
T ss_dssp             G-G-GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHH----------HHHHTCTTC
T ss_pred             c-h-hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHH----------HHHhhCCCC
Confidence            8 4 677788899999999999999999999999999999999999999986432111000          001112334


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++..|++++..+.|++++...+.++..+..||++.
T Consensus       205 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          205 RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            55566677777777777766666676777777653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=4.6e-41  Score=319.42  Aligned_cols=245  Identities=16%  Similarity=0.172  Sum_probs=202.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++.+.                .+.++.++++|
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D   68 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR----------------RPNSAITVQAD   68 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh----------------cCCeeEEEEee
Confidence            457899999999999999999999999999999999 9999888887777532                23578899999


Q ss_pred             CCCHH-----------------HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCC--------------HHHHHHHH
Q 016493          128 VCEPA-----------------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT--------------NEEIEQIV  176 (388)
Q Consensus       128 ls~~~-----------------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~--------------~~~~~~~~  176 (388)
                      ++|++                 +++++++++.+++|++|+||||||+.. ..++.+.+              .++|++++
T Consensus        69 l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (291)
T 1e7w_A           69 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLF  147 (291)
T ss_dssp             CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHH
T ss_pred             cCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHH
Confidence            99999                 999999999999999999999999876 56778888              89999999


Q ss_pred             HhhchHHHHHHHHHHHHHHcCCC-----CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 016493          177 STNLVGSILCTREAMRVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  251 (388)
Q Consensus       177 ~vN~~g~~~l~~~~lp~m~~~~~-----~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~  251 (388)
                      ++|+.++++++++++|.|++++.     .|+||++||. ++..+.++...|++||+++++|+++|+.|++++||+||+|+
T Consensus       148 ~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~  226 (291)
T 1e7w_A          148 GSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG  226 (291)
T ss_dssp             HHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEech-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEe
Confidence            99999999999999999987632     6899999998 67788889999999999999999999999999999999999


Q ss_pred             cCcccccccccCccchhhhhhhhhccCHHHHHHHHhh-hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          252 PGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       252 PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ||+|+|++ . ..   ......       .....++. ++..|++++..+.||+++...+.++..+..||++.
T Consensus       227 PG~v~T~~-~-~~---~~~~~~-------~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          227 PGLSVLVD-D-MP---PAVWEG-------HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             ESSBCCGG-G-SC---HHHHHH-------HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             eCCccCCc-c-CC---HHHHHH-------HHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence            99999998 3 21   110000       01112344 56677777777788888877677777777777763

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.4e-42  Score=319.27  Aligned_cols=240  Identities=23%  Similarity=0.247  Sum_probs=184.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   62 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--------------------GAAVRFRNADV   62 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------CEEEECCT
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------------------CCceEEEEccC
Confidence            5689999999999999999999999999999999999998877665554                    24678899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCc----CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PK  199 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~  199 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++    .+.+.++|++++++|+.++++++++++|.|+++     ++
T Consensus        63 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~  141 (257)
T 3tpc_A           63 TNEADATAALAFAKQEFGHVHGLVNCAGTAP-GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGE  141 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCC
Confidence            9999999999999999999999999999876 2333    367899999999999999999999999999875     35


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  279 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  279 (388)
                      .|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.............       
T Consensus       142 ~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-------  213 (257)
T 3tpc_A          142 RGVIVNTASI-AAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALA-------  213 (257)
T ss_dssp             CEEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------------
T ss_pred             CeEEEEEech-hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHH-------
Confidence            7899999998 67778888999999999999999999999999999999999999999987543221111110       


Q ss_pred             HHHHHHHh-hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          280 ETVARTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       280 e~vA~~~l-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                         ...++ +++..|+|++..+.||+++  .+.+|..+..||++
T Consensus       214 ---~~~p~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG~  252 (257)
T 3tpc_A          214 ---ASVPFPPRLGRAEEYAALVKHICEN--TMLNGEVIRLDGAL  252 (257)
T ss_dssp             ---CCSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             ---hcCCCCCCCCCHHHHHHHHHHHccc--CCcCCcEEEECCCc
Confidence               01122 4455566666666666654  34566666666665

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2e-41  Score=321.95  Aligned_cols=247  Identities=19%  Similarity=0.229  Sum_probs=207.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++..+...+..+.                .+.++.++++|
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D  105 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK----------------EGVKCVLLPGD  105 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT----------------TTCCEEEEESC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----------------cCCcEEEEECC
Confidence            35689999999999999999999999999999999999987544333332221                34678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.++++++++++|.|++   .|+||++|
T Consensus       106 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~is  182 (291)
T 3ijr_A          106 LSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTA  182 (291)
T ss_dssp             TTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEe
Confidence            999999999999999999999999999998754567889999999999999999999999999999964   57999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........  ...       ......++
T Consensus       183 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~--~~~-------~~~~~~p~  252 (291)
T 3ijr_A          183 SI-VAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEK--KVS-------QFGSNVPM  252 (291)
T ss_dssp             CT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHH--HHH-------HTTTTSTT
T ss_pred             ch-HhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHH--HHH-------HHHccCCC
Confidence            98 677788889999999999999999999999999999999999999999854321110  000       00112346


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       253 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  288 (291)
T 3ijr_A          253 QRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVI  288 (291)
T ss_dssp             SSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCC
T ss_pred             CCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCcc
Confidence            677889999999999999998888888888888874

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.9e-39  Score=299.77  Aligned_cols=192  Identities=29%  Similarity=0.415  Sum_probs=177.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~   66 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-----------------AGAKVHVLELDVA   66 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEECCCC
Confidence            46899999999999999999999999999999999999988888777754                 2357889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ + |+||++||.
T Consensus        67 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~  143 (247)
T 2jah_A           67 DRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-K-GTVVQMSSI  143 (247)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C-CEEEEEccH
Confidence            999999999999999999999999999976 6788899999999999999999999999999999876 3 999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       144 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  195 (247)
T 2jah_A          144 -AGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH  195 (247)
T ss_dssp             -GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred             -HhcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence             6777888899999999999999999999999999999999999999998654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-39  Score=300.20  Aligned_cols=211  Identities=24%  Similarity=0.366  Sum_probs=177.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++.++++|++|+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~D~~~~   61 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--------------------NAVIGIVADLAHH   61 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGEEEEECCTTSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--------------------CCceEEECCCCCH
Confidence            57999999999999999999999999999999999998887666541                    2588999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++  +++||++||. +
T Consensus        62 ~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~-~  137 (235)
T 3l6e_A           62 EDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER--GGVLANVLSS-A  137 (235)
T ss_dssp             HHHHHHHHHHHHHHCSCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEECCE-E
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCH-H
Confidence            9999999999999999999999999976 6788899999999999999999999999999999876  3599999998 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      +..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........     .....+|+++|+.++..+.
T Consensus       138 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-----~~~~~~pedvA~~v~~l~~  212 (235)
T 3l6e_A          138 AQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVD-----PSGFMTPEDAAAYMLDALE  212 (235)
T ss_dssp             CCSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------CBCHHHHHHHHHHHTC
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCCC-----CcCCCCHHHHHHHHHHHHh
Confidence            78888999999999999999999999999999999999999999999875432211     1123478888888776554

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=6.8e-41  Score=310.96  Aligned_cols=241  Identities=22%  Similarity=0.320  Sum_probs=192.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|++ +++++   ++++                 .+.++.++++|+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-----------------~~~~~~~~~~Dv   63 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN-----------------LGRRVLTVKCDV   63 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh-----------------cCCcEEEEEeec
Confidence            57899999999999999999999999999999999998 76654   2322                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        64 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  141 (249)
T 2ew8_A           64 SQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTS  141 (249)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcc
Confidence            9999999999999999999999999999876 5778899999999999999999999999999999876 4699999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc-cCccchhhhhhhhhccCHHHHHHHHh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL-SGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.. .............        . .++
T Consensus       142 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--------~-~~~  211 (249)
T 2ew8_A          142 T-TYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNM--------L-QAI  211 (249)
T ss_dssp             G-GGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CT--------T-SSS
T ss_pred             h-hhccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHh--------h-Ccc
Confidence            8 677788889999999999999999999999999999999999999999864 2110000000000        0 233


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++..|++++..+.||+++...+.++..+..||++
T Consensus       212 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          212 PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            45567777777777888877666666666666665

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-41  Score=314.25  Aligned_cols=247  Identities=21%  Similarity=0.268  Sum_probs=204.7

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      +...+.++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++.+                 .+.++.++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~   68 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-----------------LGFDFYAS   68 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-----------------TTCCCEEE
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCeeEEE
Confidence            345677899999999999999999999999999999988 777777776666654                 34678899


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|++|.++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||
T Consensus        69 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv  146 (256)
T 3ezl_A           69 EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRII  146 (256)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             ecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            99999999999999999999999999999999977 5788899999999999999999999999999999987 469999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          ......
T Consensus       147 ~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----------~~~~~~  215 (256)
T 3ezl_A          147 NISSV-NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVL----------EKIVAT  215 (256)
T ss_dssp             EECCC-CGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHH----------HHHHHH
T ss_pred             EEcch-hhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHH----------HHHHhc
Confidence            99998 6778889999999999999999999999999999999999999999998754321111          111222


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .++.++..|++++..+.||+++...+.+|..+..||++
T Consensus       216 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          216 IPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCE
Confidence            34456667777788888888887767777777777765

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=8.8e-40  Score=303.91  Aligned_cols=221  Identities=23%  Similarity=0.291  Sum_probs=183.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+              ...++.++++|+
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dv   68 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK--------------HVQEPIVLPLDI   68 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT--------------TSCCCEEEECCT
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc--------------ccCcceEEeccC
Confidence            467899999999999999999999999999999999999999998888866421              125688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++ +.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        69 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  145 (250)
T 3nyw_A           69 TDCTKADTEIKDIHQKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVAS  145 (250)
T ss_dssp             TCHHHHHHHHHHHHHHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEcc
Confidence            9999999999999999999999999999976 4566 78899999999999999999999999999987 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........    .....+|+++|+.++.
T Consensus       146 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          146 R-AAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFK----DEEMIQPDDLLNTIRC  220 (250)
T ss_dssp             --------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCSC----GGGSBCHHHHHHHHHH
T ss_pred             H-HhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCcc----cccCCCHHHHHHHHHH
Confidence            8 5666566689999999999999999999999999999999999999998754322111    1112367888877765


Q ss_pred             hhh
Q 016493          289 RIR  291 (388)
Q Consensus       289 ~~~  291 (388)
                      .+.
T Consensus       221 l~s  223 (250)
T 3nyw_A          221 LLN  223 (250)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=6.7e-41  Score=313.26  Aligned_cols=251  Identities=22%  Similarity=0.326  Sum_probs=204.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..                +.++.++++|+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----------------~~~~~~~~~D~   66 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF----------------GVRVLEVAVDV   66 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----------------CCCEEEEECCT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc----------------CCceEEEEcCC
Confidence            56789999999999999999999999999999999999998888777765421                35688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  144 (263)
T 3ai3_A           67 ATPEGVDAVVESVRSSFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-GGGAIIHNAS  144 (263)
T ss_dssp             TSHHHHHHHHHHHHHHHSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECc
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999876 4699999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH----HHHH-
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP----ETVA-  283 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p----e~vA-  283 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+||+......    ..........    +... 
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~  219 (263)
T 3ai3_A          145 I-CAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAK----ELTKDNGGDWKGYLQSVAD  219 (263)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHH----HHTTTTTCCHHHHHHHHHH
T ss_pred             h-hhcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhH----hhhcccCCcHHHHHHHHHh
Confidence            8 6777788889999999999999999999999999999999999999997542110    0000000001    1111 


Q ss_pred             H-HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 R-TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~-~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      . .+++++..|++++..+.|++++...+.++..+..+|++
T Consensus       220 ~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          220 EHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             HHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTC
T ss_pred             cCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            1 23455667788888888888776555555556566554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.4e-40  Score=316.51  Aligned_cols=247  Identities=15%  Similarity=0.160  Sum_probs=203.4

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+++..+ ..+++.+.                 ..++.++++
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~-----------------~~~~~~~~~   88 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEE-----------------LGAFVAGHC   88 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHH-----------------HTCEEEEEC
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHh-----------------cCCceEEEC
Confidence            46899999999999  55999999999999999999999964433 33444332                 135788999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      |++|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.++++++++++|.|++   .|+|
T Consensus        89 Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~I  165 (293)
T 3grk_A           89 DVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSI  165 (293)
T ss_dssp             CTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEE
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEE
Confidence            9999999999999999999999999999998642   367889999999999999999999999999999974   5899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........  ..      ......
T Consensus       166 v~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~------~~~~~~  236 (293)
T 3grk_A          166 LTLTYY-GAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFR--YI------LKWNEY  236 (293)
T ss_dssp             EEEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHH--HH------HHHHHH
T ss_pred             EEEeeh-hhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchH--HH------HHHHHh
Confidence            999998 677888999999999999999999999999999999999999999999865432110  00      011223


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      ..+++++..|++++..+.||+++...+.+|..+..||++...
T Consensus       237 ~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          237 NAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccC
Confidence            445677788889999999999998888899999999988543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-41  Score=311.82  Aligned_cols=247  Identities=22%  Similarity=0.339  Sum_probs=203.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+.++.++++|++|++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   64 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-----------------AGGHAVAVKVDVSDRD   64 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTSHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCHH
Confidence            68999999999999999999999999999999999988887777654                 2356889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++++..|+||++||. ++
T Consensus        65 ~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~  142 (256)
T 1geg_A           65 QVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ-AG  142 (256)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GG
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECch-hh
Confidence            999999999999999999999999876 5788899999999999999999999999999999876336899999998 66


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc-CHH---HH-HHHHh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPE---TV-ARTLV  287 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~pe---~v-A~~~l  287 (388)
                      ..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.......    ....... .++   .. ...++
T Consensus       143 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~  218 (256)
T 1geg_A          143 HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQ----VSEAAGKPLGYGTAEFAKRITL  218 (256)
T ss_dssp             TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHH----HHHHHTCCTTHHHHHHHTTCTT
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhh----ccccccCChHHHHHHHHhcCCC
Confidence            778888999999999999999999999999999999999999999985421100    0000000 001   01 11234


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++..|++++..+.||+++...+.++..+..||++
T Consensus       219 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          219 GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            55667888888888888887666677777777765

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.1e-40  Score=309.81  Aligned_cols=244  Identities=23%  Similarity=0.328  Sum_probs=179.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   66 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-----------------DGGTAISVAVD   66 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCcEEEEEcc
Confidence            4678999999999999999999999999999999999999999988888765                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCC--CCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      ++|+++++++++++.++++++|+||||||+..  +..++.+.+.++|++++++|+.++++++++++|.|+++ +.++||+
T Consensus        67 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  145 (253)
T 3qiv_A           67 VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVN  145 (253)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence            99999999999999999999999999999842  14567789999999999999999999999999999987 4799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++.   ++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......   ..      ........
T Consensus       146 isS~-~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~------~~~~~~~~  212 (253)
T 3qiv_A          146 QSST-AAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK---EM------VDDIVKGL  212 (253)
T ss_dssp             ECC---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------
T ss_pred             ECCc-ccc---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH---HH------HHHHhccC
Confidence            9987 333   45678999999999999999999999999999999999999976432211   00      01112234


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++.++..|++++..+.|++++...+.+|..+..||++
T Consensus       213 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          213 PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             -------CCHHHHHHHHHHSGGGTTCCSCEEEC----
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCe
Confidence            5567778899999888998887766666666666654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-40  Score=308.21  Aligned_cols=240  Identities=16%  Similarity=0.166  Sum_probs=199.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ||++|||||++|||+++|++|+++|  ++|++.+|+.++++++.+++                    +.++.++++|++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~   61 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--------------------GDRFFYVVGDITE   61 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEESCTTS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--------------------CCceEEEECCCCC
Confidence            6999999999999999999999985  78999999998887665543                    2468899999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.++++++++++|.|+++  +|+||++||. 
T Consensus        62 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~g~iv~isS~-  138 (254)
T 3kzv_A           62 DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--NGNVVFVSSD-  138 (254)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCS-
T ss_pred             HHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCeEEEEcCc-
Confidence            9999999999999999999999999996545788999999999999999999999999999999986  3899999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH----HHHHHHH
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP----ETVARTL  286 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p----e~vA~~~  286 (388)
                      ++..+.++...|++||+|+++|+++|+.|+  .||+||+|+||+|+|++...........     ...+    ......+
T Consensus       139 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  211 (254)
T 3kzv_A          139 ACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPS-----SMSAEQLKMFRGLKE  211 (254)
T ss_dssp             CCCCSSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTT-----TSCHHHHHHHHHHHT
T ss_pred             hhccCCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCcc-----ccCHHHHHHHHHHHh
Confidence            678888999999999999999999999998  5899999999999999876532211000     0011    1223456


Q ss_pred             hhhhhhccccccceeeccCHHH-HHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.||+++.. .+.+|..+..||+.
T Consensus       212 ~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          212 NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            6788899999999999999884 77777777666654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=7.2e-41  Score=312.34  Aligned_cols=247  Identities=22%  Similarity=0.316  Sum_probs=202.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~--l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +|+++||||++|||+++|++|+++|++|++++|+.++  +++..+++++                 .+.++.++++|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~   64 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA-----------------ADQKAVFVGLDVTD   64 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT-----------------TTCCEEEEECCTTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh-----------------cCCcEEEEEccCCC
Confidence            6999999999999999999999999999999999887  7666666543                 23568899999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++++.+|+||++||. 
T Consensus        65 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-  142 (258)
T 3a28_C           65 KANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASI-  142 (258)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCG-
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcc-
Confidence            99999999999999999999999999876 5788899999999999999999999999999999876333899999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccC-HHH----HHHH
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-PET----VART  285 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-pe~----vA~~  285 (388)
                      ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.......    ........ ++.    ....
T Consensus       143 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  218 (258)
T 3a28_C          143 AAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAE----LSKINGKPIGENFKEYSSSI  218 (258)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHH----HHHHHCCCTTHHHHHHHTTC
T ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhh----hccccCCchHHHHHHHHhcC
Confidence            67778888999999999999999999999999999999999999999985421100    00000000 111    1112


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..|++++..+.||+++...+.++..+..||++
T Consensus       219 p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          219 ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence            3456677888888888888887767777777777765

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.6e-39  Score=310.26  Aligned_cols=225  Identities=26%  Similarity=0.360  Sum_probs=195.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~   90 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-----------------QGFDAHGVVCDVR   90 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCceEEEEccCC
Confidence            48999999999999999999999999999999999999999988888765                 2467899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++++.+++|++|+||||||+.. .+++.+.+.+++++++++|+.|+++++++++|.|++++..|+||++||.
T Consensus        91 d~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  169 (301)
T 3tjr_A           91 HLDEMVRLADEAFRLLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASF  169 (301)
T ss_dssp             CHHHHHHHHHHHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCch
Confidence            999999999999999999999999999987 6888999999999999999999999999999999987557999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh----------hh----hhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK----------QM----FNII  275 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~----------~~----~~~~  275 (388)
                       ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........          .+    ....
T Consensus       170 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (301)
T 3tjr_A          170 -AGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDE  248 (301)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccC
Confidence             67888999999999999999999999999999999999999999999987532110000          00    0011


Q ss_pred             ccCHHHHHHHHhhhhhhc
Q 016493          276 CELPETVARTLVPRIRVV  293 (388)
Q Consensus       276 ~~~pe~vA~~~l~~~~~~  293 (388)
                      ..+|+++|+.++..+...
T Consensus       249 ~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          249 SVSADDVARLTADAILAN  266 (301)
T ss_dssp             CCCHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHhcC
Confidence            347999999998877643

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.5e-41  Score=317.18  Aligned_cols=248  Identities=21%  Similarity=0.265  Sum_probs=202.3

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      .+...+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+                 .+ ++.+
T Consensus        20 ~~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~-~~~~   81 (276)
T 2b4q_A           20 HMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-----------------YG-DCQA   81 (276)
T ss_dssp             -CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-----------------SS-CEEE
T ss_pred             ccccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cC-ceEE
Confidence            33445678999999999999999999999999999999999999888777666532                 12 6888


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC---C
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK---G  200 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~---~  200 (388)
                      +++|++|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++++.   .
T Consensus        82 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~  160 (276)
T 2b4q_A           82 IPADLSSEAGARRLAQALGELSARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENP  160 (276)
T ss_dssp             CCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSC
T ss_pred             EEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCC
Confidence            999999999999999999999999999999999876 577888999999999999999999999999999987632   2


Q ss_pred             cEEEEecCCCCCCCCCCCch-hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH
Q 016493          201 GHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  279 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~-~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  279 (388)
                      ++||++||. ++..+.++.. .|++||+++++|+++++.|++++||+||+|+||+++|++........           .
T Consensus       161 g~iV~isS~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----------~  228 (276)
T 2b4q_A          161 ARVINIGSV-AGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDP-----------Q  228 (276)
T ss_dssp             EEEEEECCG-GGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCH-----------H
T ss_pred             CEEEEECCH-HHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhH-----------H
Confidence            899999998 5667777777 99999999999999999999999999999999999999854211000           0


Q ss_pred             HHH-H--HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          280 ETV-A--RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       280 e~v-A--~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +.. .  ..+++++..|++++..+.|++++...+.++..+..||++
T Consensus       229 ~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          229 ALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            111 1  123455566777777777787776655666666666654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2e-41  Score=317.94  Aligned_cols=240  Identities=20%  Similarity=0.238  Sum_probs=198.7

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      .++..++++||++|||||++|||+++|++|+++|++|++++|+.++++                            ....
T Consensus        19 ~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------------------~~~~   70 (266)
T 3uxy_A           19 YFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------------------ADLH   70 (266)
T ss_dssp             -------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------------------CSEE
T ss_pred             chhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------------------hhhc
Confidence            344456789999999999999999999999999999999999865431                            1234


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      +.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+|
T Consensus        71 ~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~i  148 (266)
T 3uxy_A           71 LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAI  148 (266)
T ss_dssp             CCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             cCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            589999999999999999999999999999999987 5888999999999999999999999999999999987 47999


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH-
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-  282 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v-  282 (388)
                      |++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......        ....+++. 
T Consensus       149 v~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~~~  219 (266)
T 3uxy_A          149 VNVASC-WGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAK--------RGFDPDRAV  219 (266)
T ss_dssp             EEECCS-BTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHH--------TTCCHHHHH
T ss_pred             EEECCH-HhCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhc--------ccccchHHH
Confidence            999998 77888999999999999999999999999999999999999999999986432110        00111111 


Q ss_pred             ----HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 ----ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 ----A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                          ...+++++..|++++..+.||+++...+.+|..+..||++
T Consensus       220 ~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          220 AELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             HHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCE
Confidence                1234456778888888889999988877777777777775

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=6.6e-41  Score=314.87  Aligned_cols=249  Identities=21%  Similarity=0.293  Sum_probs=204.8

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +...+++||++|||||++|||+++|++|+++|++|++++|+.+..                           ...+..++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------------------~~~~~~~~   59 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------------------VNVSDHFK   59 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------------------TTSSEEEE
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------------------cCceeEEE
Confidence            345688999999999999999999999999999999999987542                           12456789


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||+
T Consensus        60 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~  137 (269)
T 3vtz_A           60 IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIIN  137 (269)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence            9999999999999999999999999999999977 6788999999999999999999999999999999987 5799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhh-hccCHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICELPETVAR  284 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~pe~vA~  284 (388)
                      +||. ++..+.++...|++||+|+++|+++++.|+++ ||+||+|+||+|+|++............... ..........
T Consensus       138 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (269)
T 3vtz_A          138 IASV-QSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ  215 (269)
T ss_dssp             ECCG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH
T ss_pred             ECch-hhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc
Confidence            9998 67888899999999999999999999999998 8999999999999998643211000000000 0000112233


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      .+++++..|++++..+.||+++...+.+|..+..||++...
T Consensus       216 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  256 (269)
T 3vtz_A          216 HPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSK  256 (269)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcccc
Confidence            45667788999999999999999888889889999888543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.2e-40  Score=311.19  Aligned_cols=254  Identities=18%  Similarity=0.183  Sum_probs=202.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..               .+.++.++++|+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~   67 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV---------------SGAQVDIVAGDI   67 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---------------TTCCEEEEECCT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCeEEEEEccC
Confidence            46789999999999999999999999999999999999998888777765311               123688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++| +|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        68 ~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  144 (260)
T 2z1n_A           68 REPGDIDRLFEKARDLGG-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGS  144 (260)
T ss_dssp             TCHHHHHHHHHHHHHTTC-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcC-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence            999999999999999999 999999999876 5778899999999999999999999999999999876 4699999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh--hhhhhhccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK--QMFNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~pe~vA~~~  286 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++..........  ...... .........+
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p  222 (260)
T 2z1n_A          145 V-TLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE-ALKSMASRIP  222 (260)
T ss_dssp             G-GGTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------CCT
T ss_pred             h-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH-HHHHHHhcCC
Confidence            8 67778888999999999999999999999999999999999999999986521100000  000000 0000011123


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.|++++...+.++..+..||++
T Consensus       223 ~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          223 MGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            455667788888888888887666666666666664

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-40  Score=316.68  Aligned_cols=252  Identities=21%  Similarity=0.253  Sum_probs=205.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+...              ...++.++++|+
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~Dv   87 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--------------PAEKINAVVADV   87 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--------------CCceEEEEecCC
Confidence            468999999999999999999999999999999999999998888777754200              012688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC--cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..+  +.+.+.++|++++++|+.++++++++++|.|++++  |+||++
T Consensus        88 ~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~i  164 (297)
T 1xhl_A           88 TEASGQDDIINTTLAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNV  164 (297)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEE
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEE
Confidence            9999999999999999999999999999866 455  78899999999999999999999999999998873  999999


Q ss_pred             cCCCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH---
Q 016493          207 DGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV---  282 (388)
Q Consensus       207 sS~~~~~~~~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v---  282 (388)
                      ||. ++..+. ++...|++||+++++|+++++.|++++||+||+|+||+|+|++............ .    .++..   
T Consensus       165 sS~-~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-~----~~~~~~~~  238 (297)
T 1xhl_A          165 SSI-VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASD-K----LYSFIGSR  238 (297)
T ss_dssp             CCG-GGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHH-H----HHHHHHHC
T ss_pred             cCc-hhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccccccccc-c----hHHHHHHH
Confidence            998 556666 8889999999999999999999999999999999999999998643210000000 0    00000   


Q ss_pred             -HHHHhhhhhhccccccceeeccCHH-HHHHHHHhHhhcCccc
Q 016493          283 -ARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWF  323 (388)
Q Consensus       283 -A~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~  323 (388)
                       ...+++++..|++++..+.||+++. ..+.++..+..||++.
T Consensus       239 ~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~  281 (297)
T 1xhl_A          239 KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  281 (297)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCcc
Confidence             0123456677888888888898887 7677777777777764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=8.7e-41  Score=314.74  Aligned_cols=265  Identities=12%  Similarity=0.106  Sum_probs=208.2

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..                 ..+.++++|
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-----------------~~~~~~~~D   64 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL-----------------NSPYVYELD   64 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT-----------------TCCCEEECC
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc-----------------CCcEEEEcC
Confidence            4689999999999  99999999999999999999999986 444555554421                 236789999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.++++++++++|.|++   +|+||
T Consensus        65 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv  141 (275)
T 2pd4_A           65 VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVL  141 (275)
T ss_dssp             TTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEE
Confidence            999999999999999999999999999998652   256788999999999999999999999999999974   48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....... .. ..      ......
T Consensus       142 ~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~-~~------~~~~~~  212 (275)
T 2pd4_A          142 TLSYL-GSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-RM-IL------KWNEIN  212 (275)
T ss_dssp             EEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-HH-HH------HHHHHH
T ss_pred             EEecc-hhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcccc-HH-HH------HHHHhc
Confidence            99997 67778888999999999999999999999999999999999999999986432110 00 00      001112


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc--cccchhccchhhhhccccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD--QGRALYAAEADRIRNWAEN  344 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~w~e~  344 (388)
                      .++.++..|++++..+.|++++...+.++..+..||++...  .......+..+++|+|.++
T Consensus       213 ~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          213 APLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             CCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            23445566777777777887776666677777778877432  2222334456677777653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=7.6e-40  Score=302.87  Aligned_cols=227  Identities=21%  Similarity=0.272  Sum_probs=193.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++..                ..+..++.+|
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~d   72 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG----------------QPQPLIIALN   72 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----------------SCCCEEEECC
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC----------------CCCceEEEec
Confidence            356899999999999999999999999999999999999999998888876531                2345566666


Q ss_pred             C--CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          128 V--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       128 l--s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +  +|.++++++++++.+.+|++|+||||||+..+..++.+.+.++|++++++|+.++++++++++|.|+++ +.++||+
T Consensus        73 ~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~  151 (247)
T 3i1j_A           73 LENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAF  151 (247)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEE
T ss_pred             cccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEE
Confidence            6  999999999999999999999999999986546788999999999999999999999999999999887 5799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      +||. .+..+.++...|++||+|+++|+++++.|+++ .||+||+|+||+|+|++........          .+     
T Consensus       152 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----------~~-----  215 (247)
T 3i1j_A          152 TSSS-VGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE----------NP-----  215 (247)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS----------CG-----
T ss_pred             Ecch-hhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc----------Cc-----
Confidence            9998 67788899999999999999999999999987 8999999999999999864321110          00     


Q ss_pred             HHhhhhhhccccccceeeccCHHHHH
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILL  310 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~  310 (388)
                         .+...|++++..+.||++++..+
T Consensus       216 ---~~~~~p~dva~~~~~l~s~~~~~  238 (247)
T 3i1j_A          216 ---LNNPAPEDIMPVYLYLMGPDSTG  238 (247)
T ss_dssp             ---GGSCCGGGGTHHHHHHHSGGGTT
T ss_pred             ---cCCCCHHHHHHHHHHHhCchhcc
Confidence               12345777777778888876533

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.8e-40  Score=311.80  Aligned_cols=249  Identities=26%  Similarity=0.366  Sum_probs=205.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++|++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~   81 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-----------------AGVEADGRTCDVR   81 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEECCCC
Confidence            68999999999999999999999999999999999999988887777654                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHH--HHcCCCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~--m~~~~~~g~Iv~is  207 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.  |+++ +.|+||++|
T Consensus        82 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-~~g~iv~is  159 (277)
T 2rhc_B           82 SVPEIEALVAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIA  159 (277)
T ss_dssp             CHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-TEEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-CCeEEEEEC
Confidence            999999999999999999999999999876 577889999999999999999999999999999  8876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccC-HH----HH
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-PE----TV  282 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-pe----~v  282 (388)
                      |. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++.......    ........ ++    ..
T Consensus       160 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~  234 (277)
T 2rhc_B          160 ST-GGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH----YSDIWEVSTEEAFDRIT  234 (277)
T ss_dssp             CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHH----HHHHHTCCHHHHHHHHH
T ss_pred             cc-ccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhh----cccccccchHHHHHHHH
Confidence            98 66778888999999999999999999999999999999999999999985321100    00000000 01    11


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...+++++..|++++..+.|++++...+.++..+..+|++
T Consensus       235 ~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          235 ARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            1224456667888888888888877666666666666665

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.5e-40  Score=311.34  Aligned_cols=247  Identities=23%  Similarity=0.272  Sum_probs=207.2

Q ss_pred             cccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           47 EHCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        47 ~~~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ..++++||+++||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+.                .+.++.+
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~----------------~~~~~~~   77 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT----------------YGIKAKA   77 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH----------------HCCCEEC
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh----------------cCCceeE
Confidence            4468899999999999  9999999999999999999999887655 6666666543                2467899


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      +++|++|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+|
T Consensus        78 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~i  155 (267)
T 3gdg_A           78 YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSL  155 (267)
T ss_dssp             CBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEE
T ss_pred             EecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceE
Confidence            999999999999999999999999999999999987 5778899999999999999999999999999999987 47899


Q ss_pred             EEecCCCCCCCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          204 FNMDGAGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       204 v~isS~~~~~~~~--~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                      |++||. ++..+.  ++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++..........          ..
T Consensus       156 v~isS~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~~----------~~  223 (267)
T 3gdg_A          156 VITASM-SGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQ----------LW  223 (267)
T ss_dssp             EEECCG-GGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHHH----------HH
T ss_pred             EEEccc-cccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHHH----------HH
Confidence            999997 444443  477899999999999999999999987 9999999999999987543221111          11


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ....+++++..|++++..+.||+++...+.+|..+..||+|.
T Consensus       224 ~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          224 HSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             HhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            112345666778888888889998887778888888888874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.3e-38  Score=297.74  Aligned_cols=220  Identities=26%  Similarity=0.361  Sum_probs=184.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++.+|
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   86 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-----------------AGGEAESHACD   86 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------hCCceeEEEec
Confidence            3458999999999999999999999999999999999999999888888765                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.+|++|+||||||+....+++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        87 ~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~is  165 (262)
T 3rkr_A           87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINIS  165 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEe
Confidence            9999999999999999999999999999984436788899999999999999999999999999999987 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........    ......+|+++|+.++
T Consensus       166 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          166 SL-AGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKK----SALGAIEPDDIADVVA  240 (262)
T ss_dssp             SS-CSSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCCHHHHHHHHH
T ss_pred             ch-hhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccccc----ccccCCCHHHHHHHHH
Confidence            98 678888999999999999999999999999999999999999999999865432211    1111236777777665


Q ss_pred             hhh
Q 016493          288 PRI  290 (388)
Q Consensus       288 ~~~  290 (388)
                      ..+
T Consensus       241 ~l~  243 (262)
T 3rkr_A          241 LLA  243 (262)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            444

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1e-40  Score=313.25  Aligned_cols=244  Identities=21%  Similarity=0.306  Sum_probs=198.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||+++|++|+++|++|++.+ |+.+.+++..+++.+                 .+.++.++.+|+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl   84 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-----------------AGRDFKAYAVDV   84 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-----------------TTCCCEEEECCT
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-----------------cCCceEEEEecC
Confidence            46889999999999999999999999999999998 555556555554432                 346789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|+++ +.|+||++||
T Consensus        85 ~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS  162 (269)
T 3gk3_A           85 ADFESCERCAEKVLADFGKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGS  162 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCC
Confidence            9999999999999999999999999999987 5788899999999999999999999999999999887 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...........  ..       ....+++
T Consensus       163 ~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~--~~-------~~~~~~~  232 (269)
T 3gk3_A          163 V-NGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEA--KI-------LPQIPVG  232 (269)
T ss_dssp             H-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------C--CS-------GGGCTTS
T ss_pred             h-hhccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHH--Hh-------hhcCCcC
Confidence            7 677788889999999999999999999999999999999999999999876432211110  00       0012234


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..|++++..+.||+++...+.+|..+..||++
T Consensus       233 ~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          233 RLGRPDEVAALIAFLCSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             SCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTS
T ss_pred             CccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCE
Confidence            4455666666667777777666677777777765

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.6e-40  Score=309.42  Aligned_cols=241  Identities=28%  Similarity=0.363  Sum_probs=194.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++++|++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   61 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------------------GDAARYQHLDVT   61 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------------------GGGEEEEECCTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEecCC
Confidence            468999999999999999999999999999999999988776654432                    245788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++++++.++|.|+++ +.|+||++||.
T Consensus        62 ~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  139 (254)
T 1hdc_A           62 IEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSA  139 (254)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECch
Confidence            999999999999999999999999999876 5778899999999999999999999999999999886 47999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++..............          ..++.+
T Consensus       140 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~----------~~p~~~  208 (254)
T 1hdc_A          140 -AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYP----------NTPMGR  208 (254)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCT----------TSTTSS
T ss_pred             -hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHh----------cCCCCC
Confidence             667788889999999999999999999999999999999999999999854311100000000          011233


Q ss_pred             hh-hccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IR-VVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +. .|++++..+.|++++...+.++..+..||++.
T Consensus       209 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence            33 45555555556666655555566666666653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-40  Score=312.32  Aligned_cols=252  Identities=21%  Similarity=0.242  Sum_probs=204.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+...              ...++.++++|++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dv~   68 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--------------SEKQVNSVVADVT   68 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCcceEEEEecCC
Confidence            47899999999999999999999999999999999999988877776643100              0126889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC----cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      |+++++++++++.+++|++|+||||||+.. ..+    +.+.+.++|++++++|+.++++++++++|.|++++  |+||+
T Consensus        69 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~  145 (280)
T 1xkq_A           69 TEDGQDQIINSTLKQFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVN  145 (280)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEE
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEE
Confidence            999999999999999999999999999875 455    77889999999999999999999999999998763  89999


Q ss_pred             ecCCCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH--
Q 016493          206 MDGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV--  282 (388)
Q Consensus       206 isS~~~~~~~~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v--  282 (388)
                      +||. ++..+. ++...|++||+++++|+++++.|++++||+||+|+||+|+|++............ .    .++..  
T Consensus       146 isS~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~----~~~~~~~  219 (280)
T 1xkq_A          146 VSSI-VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQ-K----FYNFMAS  219 (280)
T ss_dssp             ECCG-GGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHH-H----HHHHHHH
T ss_pred             ecCc-cccCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccccccccccc-c----hHHHHHH
Confidence            9998 556666 8889999999999999999999999999999999999999998643210000000 0    00000  


Q ss_pred             --HHHHhhhhhhccccccceeeccCHH-HHHHHHHhHhhcCcccc
Q 016493          283 --ARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWFD  324 (388)
Q Consensus       283 --A~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~~  324 (388)
                        ...+++++..|++++..+.|++++. ..+.++..+..||++..
T Consensus       220 ~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          220 HKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             CTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence              0123456677788888888888887 66777777888887644

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-40  Score=308.02  Aligned_cols=248  Identities=23%  Similarity=0.289  Sum_probs=198.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+.++..+...+..+.                .+.++.++++|+
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   66 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD----------------VEERLQFVQADV   66 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG----------------GGGGEEEEECCT
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh----------------cCCceEEEEecC
Confidence            3456899999999999999999999999999999988765543333332211                245799999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEcccc--CCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      +|+++++++++++.++++++|+||||||+  .. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++
T Consensus        67 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~i  144 (264)
T 3i4f_A           67 TKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFE-RKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINY  144 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCS-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccccC-CCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence            99999999999999999999999999994  33 5678899999999999999999999999999999987 47999999


Q ss_pred             cCCCCC-CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          207 DGAGSG-GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       207 sS~~~~-~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      ||.... ..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........          ......
T Consensus       145 ss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----------~~~~~~  214 (264)
T 3i4f_A          145 GFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQ----------LKEHNT  214 (264)
T ss_dssp             CCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHH----------C-----
T ss_pred             eechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHH----------HHhhcC
Confidence            987333 667778899999999999999999999999999999999999999987543221100          011234


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +++++..|++++..+.||+++...+.+|..+..||++..
T Consensus       215 p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          215 PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             ---CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            556667778888888888888877777888888887743

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.7e-40  Score=310.61  Aligned_cols=240  Identities=15%  Similarity=0.189  Sum_probs=179.9

Q ss_pred             hhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           42 NMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        42 ~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      .....+.|+++||++|||||++|||+++|++|+++|++|++++|+.+++.+.   +.+                   ..+
T Consensus        16 ~~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~-------------------~~~   73 (260)
T 3gem_A           16 NLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQ-------------------AGA   73 (260)
T ss_dssp             -----------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHH-------------------HTC
T ss_pred             CcccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHh-------------------cCC
Confidence            3444456889999999999999999999999999999999999998765332   222                   126


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      .++.+|++|+++++++++++.+++|++|+||||||+.. ..+ .+.+.++|++++++|+.++++++++++|.|+++ +.|
T Consensus        74 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g  150 (260)
T 3gem_A           74 VALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWL-AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVA  150 (260)
T ss_dssp             EEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCC-CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSC
T ss_pred             eEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccC-CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence            78999999999999999999999999999999999865 333 677889999999999999999999999999987 579


Q ss_pred             EEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          202 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       202 ~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                      +||++||. ++..+.++...|++||+|+++|+++++.|+++ +|+||+|+||+|+|++.......            ...
T Consensus       151 ~iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~~------------~~~  216 (260)
T 3gem_A          151 DIVHISDD-VTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAYR------------ANA  216 (260)
T ss_dssp             EEEEECCG-GGGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC------------------------
T ss_pred             EEEEECCh-hhcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHHHH------------HHH
Confidence            99999998 67788889999999999999999999999998 69999999999999875321100            011


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ....++.++..|++++..+.||+  ...+.+|..+..||++
T Consensus       217 ~~~~p~~r~~~~edva~~v~~L~--~~~~itG~~i~vdGG~  255 (260)
T 3gem_A          217 LAKSALGIEPGAEVIYQSLRYLL--DSTYVTGTTLTVNGGR  255 (260)
T ss_dssp             ---CCSCCCCCTHHHHHHHHHHH--HCSSCCSCEEEESTTT
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHh--hCCCCCCCEEEECCCc
Confidence            11223344445555555555555  2234455556666665

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.5e-40  Score=312.63  Aligned_cols=248  Identities=19%  Similarity=0.207  Sum_probs=197.2

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      +...++++|++|||||++|||+++|++|+++|++|++++|+. ++++++.+++.+.                .+.++.++
T Consensus        16 ~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~----------------~~~~~~~~   79 (288)
T 2x9g_A           16 PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE----------------RSNTAVVC   79 (288)
T ss_dssp             ------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEE
T ss_pred             CCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh----------------cCCceEEE
Confidence            344678899999999999999999999999999999999998 8888777776532                23578899


Q ss_pred             EccCCC----HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCc-----CC-----CCHHHHHHHHHhhchHHHHHHHHH
Q 016493          125 ACDVCE----PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-----LQ-----FTNEEIEQIVSTNLVGSILCTREA  190 (388)
Q Consensus       125 ~~Dls~----~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-----~~-----~~~~~~~~~~~vN~~g~~~l~~~~  190 (388)
                      ++|++|    +++++++++++.+.+|++|+||||||+.. ..++     .+     .+.++|++++++|+.+++++++++
T Consensus        80 ~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  158 (288)
T 2x9g_A           80 QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSF  158 (288)
T ss_dssp             ECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             EeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            999999    99999999999999999999999999876 4555     56     788999999999999999999999


Q ss_pred             HHHHHcCCC-----CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc
Q 016493          191 MRVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST  265 (388)
Q Consensus       191 lp~m~~~~~-----~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~  265 (388)
                      +|.|++++.     .|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++ . ...
T Consensus       159 ~~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~~  235 (288)
T 2x9g_A          159 AQRQKGTNPNCTSSNLSIVNLCDA-MVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MGE  235 (288)
T ss_dssp             HHHC--------CCCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SCH
T ss_pred             HHHHhhcCCCCCCCCeEEEEEecc-cccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cCh
Confidence            999987631     6899999998 6778888999999999999999999999999999999999999999998 3 111


Q ss_pred             chhhhhhhhhccCHHHHHHHHhhhh-hhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          266 IQNKQMFNIICELPETVARTLVPRI-RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       266 ~~~~~~~~~~~~~pe~vA~~~l~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .   ...       ......++.++ ..|++++..+.||+++...+.+|..+..||++.
T Consensus       236 ~---~~~-------~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          236 E---EKD-------KWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             H---HHH-------HHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             H---HHH-------HHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence            0   000       00111234455 567777777778888877677777777777753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=8e-39  Score=300.20  Aligned_cols=188  Identities=24%  Similarity=0.346  Sum_probs=171.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++.                       ...++.++++|++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~Dv~   69 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-----------------------NLPNTLCAQVDVT   69 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-----------------------CCTTEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-----------------------hcCCceEEEecCC
Confidence            46789999999999999999999999999999999998765432                       1236788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||.
T Consensus        70 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~  147 (266)
T 3p19_A           70 DKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSI  147 (266)
T ss_dssp             CHHHHHHHHHHHHHHHCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCh
Confidence            999999999999999999999999999987 6788999999999999999999999999999999987 47999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccC
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~  263 (388)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus       148 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  200 (266)
T 3p19_A          148 -AGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHT  200 (266)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred             -hhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcc
Confidence             67888899999999999999999999999999999999999999999987654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.5e-40  Score=310.22  Aligned_cols=244  Identities=18%  Similarity=0.272  Sum_probs=204.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++.+|++|||||++|||+++|++|+++|++|++ ..|+.+++++..+++.+                 .+.++.++++|
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   84 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVA-----------------NGGNGRLLSFD   84 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----------------cCCceEEEEec
Confidence            3567899999999999999999999999999966 56788888887777765                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|.|.++.+.++||++|
T Consensus        85 l~~~~~~~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  163 (267)
T 4iiu_A           85 VANREQCREVLEHEIAQHGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLS  163 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence            99999999999999999999999999999987 57888999999999999999999999999999987444679999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......    .       .+.....++
T Consensus       164 S~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~-------~~~~~~~p~  231 (267)
T 4iiu_A          164 SV-SGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESA----L-------KEAMSMIPM  231 (267)
T ss_dssp             CH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHH----H-------HHHHHTCTT
T ss_pred             ch-HhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHH----H-------HHHHhcCCC
Confidence            97 67778889999999999999999999999999999999999999999987543111    0       111122334


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++..|++++..+.||+++...+.+|+.+..||++
T Consensus       232 ~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          232 KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            55667777777778888887777777777777765

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-40  Score=314.92  Aligned_cols=250  Identities=18%  Similarity=0.201  Sum_probs=200.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHHhhhhhhcCCCCccc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~------------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+            .+++++...++.+                
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   68 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK----------------   68 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH----------------
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh----------------
Confidence            346899999999999999999999999999999999998            6666666665544                


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  195 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  195 (388)
                       .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..  .+.+.++|++++++|+.++++++++++|.|+
T Consensus        69 -~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~  144 (287)
T 3pxx_A           69 -TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICP-LG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT  144 (287)
T ss_dssp             -TTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred             -cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCc-cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh
Confidence             3467899999999999999999999999999999999999965 23  3478899999999999999999999999993


Q ss_pred             cCCCCcEEEEecCCCCCCCCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCc
Q 016493          196 DQPKGGHIFNMDGAGSGGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS  264 (388)
Q Consensus       196 ~~~~~g~Iv~isS~~~~~~~~-----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~  264 (388)
                         +.|+||++||. ++..+.           ++...|++||+++++|+++++.|++++||+||+|+||+|+|++.....
T Consensus       145 ---~~g~iv~isS~-~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  220 (287)
T 3pxx_A          145 ---SGASIITTGSV-AGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAP  220 (287)
T ss_dssp             ---TTCEEEEECCH-HHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHH
T ss_pred             ---cCcEEEEeccc-hhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc
Confidence               45899999987 344333           567789999999999999999999999999999999999999875321


Q ss_pred             cchhhhhhhh-hccCHHHHHHH--H----hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          265 TIQNKQMFNI-ICELPETVART--L----VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       265 ~~~~~~~~~~-~~~~pe~vA~~--~----l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..  ..+... ......+....  .    -.++..|+|++..+.||+++...+++|..+..||++.
T Consensus       221 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          221 MY--RQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             HH--HHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hh--hhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhh
Confidence            10  000000 00011111110  0    0455677888888999999998888888888888874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.2e-40  Score=308.72  Aligned_cols=234  Identities=26%  Similarity=0.354  Sum_probs=188.6

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      +++.+++++|++|||||++|||+++|++|+++|++|++++|+.++.                          ...++.++
T Consensus        20 ~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------------------~~~~~~~~   73 (260)
T 3un1_A           20 FQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------------------------ADPDIHTV   73 (260)
T ss_dssp             CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--------------------------SSTTEEEE
T ss_pred             hhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------------------------ccCceEEE
Confidence            3344678899999999999999999999999999999999986532                          12468899


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||
T Consensus        74 ~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv  151 (260)
T 3un1_A           74 AGDISKPETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIV  151 (260)
T ss_dssp             ESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred             EccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEE
Confidence            99999999999999999999999999999999987 5788999999999999999999999999999999987 579999


Q ss_pred             EecCCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          205 NMDGAGSGG--SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       205 ~isS~~~~~--~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ++||. .+.  .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+||+......   ...          .
T Consensus       152 ~isS~-~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~---~~~----------~  217 (260)
T 3un1_A          152 SITTS-LVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH---STL----------A  217 (260)
T ss_dssp             EECCT-TTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH---HHH----------H
T ss_pred             EEech-hhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH---HHH----------h
Confidence            99987 333  3445668999999999999999999999999999999999999998643111   000          0


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...+++++..|+|++..+.||  +...+.+|..+..||++
T Consensus       218 ~~~p~~r~~~~~dva~av~~L--~~~~~itG~~i~vdGG~  255 (260)
T 3un1_A          218 GLHPVGRMGEIRDVVDAVLYL--EHAGFITGEILHVDGGQ  255 (260)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHH--HHCTTCCSCEEEESTTG
T ss_pred             ccCCCCCCcCHHHHHHHHHHh--cccCCCCCcEEEECCCe
Confidence            112334444555555555555  33334455556666655

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=3e-40  Score=307.64  Aligned_cols=246  Identities=25%  Similarity=0.339  Sum_probs=197.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+  ++..+++.+                 .+.++.++++|++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~-----------------~~~~~~~~~~D~~   61 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR-----------------HGVKAVHHPADLS   61 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT-----------------TSCCEEEECCCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh-----------------cCCceEEEeCCCC
Confidence            357899999999999999999999999999999999876  334444432                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||.
T Consensus        62 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~  139 (255)
T 2q2v_A           62 DVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASV  139 (255)
T ss_dssp             SHHHHHHHHHHHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCc
Confidence            999999999999999999999999999876 5778899999999999999999999999999999987 47999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH----HH--HH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP----ET--VA  283 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p----e~--vA  283 (388)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+||+........ ...    ....    +.  ..
T Consensus       140 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~----~~~~~~~~~~~~~~  213 (255)
T 2q2v_A          140 -HGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDR-AAN----GGDPLQAQHDLLAE  213 (255)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHH-HHH----TCCHHHHHHHHHTT
T ss_pred             -hhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccc-ccc----ccchHHHHHHHHhc
Confidence             677788889999999999999999999999999999999999999999854211000 000    0001    00  00


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..++.++..|++++..+.|++++...+.++..+..+|++
T Consensus       214 ~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          214 KQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             TCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            123345567777777778888776655556666666654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=7.2e-40  Score=310.05  Aligned_cols=245  Identities=17%  Similarity=0.216  Sum_probs=197.9

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..                 ..+.++++|+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-----------------~~~~~~~~Dl   80 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF-----------------GSDLVVKCDV   80 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT-----------------TCCCEEECCT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc-----------------CCeEEEEcCC
Confidence            789999999999  99999999999999999999999985 444455554321                 2367889999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.|+++++++++|.|+++  +|+||+
T Consensus        81 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~  158 (285)
T 2p91_A           81 SLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVT  158 (285)
T ss_dssp             TCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEE
Confidence            99999999999999999999999999998652   1567789999999999999999999999999999864  589999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...... .. ...      .......
T Consensus       159 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~-~~~------~~~~~~~  229 (285)
T 2p91_A          159 LSYY-GAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG-FH-LLM------EHTTKVN  229 (285)
T ss_dssp             EECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT-HH-HHH------HHHHHHS
T ss_pred             Eccc-hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc-hH-HHH------HHHHhcC
Confidence            9997 5677788889999999999999999999999999999999999999998543211 00 000      0011122


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ++.++..|++++..+.|++++...+.++..+..+|++..
T Consensus       230 p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~  268 (285)
T 2p91_A          230 PFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHI  268 (285)
T ss_dssp             TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            344556677777777788887766667777777887754

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=8.6e-40  Score=306.11  Aligned_cols=248  Identities=16%  Similarity=0.159  Sum_probs=203.7

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+....+.. +++.++.               ...++.++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~---------------~~~~~~~~~~   66 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTL---------------DRNDSIILPC   66 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTS---------------SSCCCEEEEC
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhc---------------CCCCceEEeC
Confidence            57899999999999  6799999999999999999999996554433 3333321               1237899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      |++|+++++++++++.++++++|+||||||+..+   ..++.+.+.+++++++++|+.++++++++++|.|++   .|+|
T Consensus        67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~i  143 (266)
T 3oig_A           67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSI  143 (266)
T ss_dssp             CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceE
Confidence            9999999999999999999999999999998642   367788999999999999999999999999999973   5899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........ ...       .....
T Consensus       144 v~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~-------~~~~~  214 (266)
T 3oig_A          144 VTLTYL-GGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFN-SIL-------KDIEE  214 (266)
T ss_dssp             EEEECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH-HHH-------HHHHH
T ss_pred             EEEecc-cccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchH-HHH-------HHHHh
Confidence            999998 678888999999999999999999999999999999999999999999865432210 000       11122


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ..++++...|++++..+.||+++...+.+|..+..||+|..
T Consensus       215 ~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          215 RAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence            33445666777778888888888777778888888888754

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-40  Score=308.03  Aligned_cols=253  Identities=20%  Similarity=0.259  Sum_probs=193.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++.+...              .+.++.++++|++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D~~   68 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--------------SEQNVNSVVADVT   68 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc--------------CCCceeEEecccC
Confidence            46899999999999999999999999999999999999988877776633110              2356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCC----CHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF----TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.    +.++|++++++|+.++++++++++|.|+++ + |+||+
T Consensus        69 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-g~iv~  145 (278)
T 1spx_A           69 TDAGQDEILSTTLGKFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-K-GEIVN  145 (278)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEE
Confidence            999999999999999999999999999876 4667777    999999999999999999999999999876 3 89999


Q ss_pred             ecCCCCC-CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH-H
Q 016493          206 MDGAGSG-GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-A  283 (388)
Q Consensus       206 isS~~~~-~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v-A  283 (388)
                      +||. ++ ..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++......... ....... ..+.. .
T Consensus       146 isS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~-~~~~~~~  222 (278)
T 1spx_A          146 ISSI-ASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEE-TSKKFYS-TMATMKE  222 (278)
T ss_dssp             ECCT-TSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HH-HHHHHHH
T ss_pred             Eecc-cccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCch-hhhhhhH-HHHHHHh
Confidence            9998 45 77888899999999999999999999999999999999999999998643211000 0000000 00111 1


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHH-HHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILL-ALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~g~~  322 (388)
                      ..+++++..|++++..+.|++++...+ .++..+..||++
T Consensus       223 ~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~  262 (278)
T 1spx_A          223 CVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  262 (278)
T ss_dssp             HCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             cCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCc
Confidence            123456677888888888888887655 666666666665

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1e-39  Score=304.34  Aligned_cols=242  Identities=21%  Similarity=0.285  Sum_probs=192.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|++++ ++..+++                     .+ .++++|+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~---------------------~~-~~~~~D~   58 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI---------------------GG-AFFQVDL   58 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH---------------------TC-EEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh---------------------hC-CEEEeeC
Confidence            35789999999999999999999999999999999999876 5444332                     13 6789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        59 ~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS  136 (256)
T 2d1y_A           59 EDERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVAS  136 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            9999999999999999999999999999876 5778899999999999999999999999999999987 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc--chhhhhhhhhccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST--IQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++......  ......      ........+
T Consensus       137 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~  209 (256)
T 2d1y_A          137 V-QGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERT------RRDWEDLHA  209 (256)
T ss_dssp             G-GGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------------CHHHHTTST
T ss_pred             c-cccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHH------HHHHHhcCC
Confidence            8 6777888899999999999999999999999999999999999999997532100  000000      000011112


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.|++++...+.++..+..+|++
T Consensus       210 ~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          210 LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGM  245 (256)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            344556666666666777666544555555555554

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-40  Score=311.92  Aligned_cols=246  Identities=24%  Similarity=0.332  Sum_probs=201.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                     .++.++++|+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~Dv   63 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------------------PGAVFILCDV   63 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------------------TTEEEEECCT
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------------------cCCeEEEcCC
Confidence            4578999999999999999999999999999999999988776554332                     2367899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.++++++++++|.|+++  .|+||++||
T Consensus        64 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS  141 (270)
T 1yde_A           64 TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISS  141 (270)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcC
Confidence            999999999999999999999999999986534678899999999999999999999999999999865  589999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++..............    ..+.....+++
T Consensus       142 ~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~----~~~~~~~~p~~  216 (270)
T 1yde_A          142 L-VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRAS----IREGMLAQPLG  216 (270)
T ss_dssp             H-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHH----HHHHHHTSTTS
T ss_pred             c-cccCCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHH----HHHHhhcCCCC
Confidence            7 556677888999999999999999999999999999999999999999853211000000000    00111223556


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++..|+|++..+.||+++ ..+.+|..+..||++.
T Consensus       217 r~~~p~dva~~v~~L~s~-~~~itG~~i~vdGG~~  250 (270)
T 1yde_A          217 RMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAE  250 (270)
T ss_dssp             SCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHccc-CCCcCCCEEEECCCee
Confidence            777888888888899887 5567777788888764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=317.23  Aligned_cols=224  Identities=21%  Similarity=0.320  Sum_probs=188.5

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-------HHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-------l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      .+....+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++.+                 
T Consensus        36 m~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-----------------   98 (346)
T 3kvo_A           36 MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-----------------   98 (346)
T ss_dssp             CCCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-----------------
T ss_pred             cCccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-----------------
Confidence            3445578899999999999999999999999999999999999875       4455555544                 


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++
T Consensus        99 ~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  177 (346)
T 3kvo_A           99 VGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKK  177 (346)
T ss_dssp             TTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred             cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999987 678899999999999999999999999999999998


Q ss_pred             CCCCcEEEEecCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc-ccccccccCccchhhhhhh
Q 016493          197 QPKGGHIFNMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM-VLTDLLLSGSTIQNKQMFN  273 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~~~~~--~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~-v~T~~~~~~~~~~~~~~~~  273 (388)
                      + +.|+||++||. .+..+  .++...|++||+|+++|+++|+.|++ .||+||+|+||. ++|++.........    .
T Consensus       178 ~-~~g~IV~iSS~-~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~~~----~  250 (346)
T 3kvo_A          178 S-KVAHILNISPP-LNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGI----E  250 (346)
T ss_dssp             C-SSCEEEEECCC-CCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--C----G
T ss_pred             C-CCCEEEEECCH-HHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccccc----c
Confidence            7 57999999998 55555  67889999999999999999999999 899999999995 99987643211110    0


Q ss_pred             hhccCHHHHHHHHhhhhhh
Q 016493          274 IICELPETVARTLVPRIRV  292 (388)
Q Consensus       274 ~~~~~pe~vA~~~l~~~~~  292 (388)
                      ....+|+++|+.++..+..
T Consensus       251 ~r~~~pedvA~~v~~L~s~  269 (346)
T 3kvo_A          251 SQCRKVDIIADAAYSIFQK  269 (346)
T ss_dssp             GGCBCTHHHHHHHHHHHTS
T ss_pred             ccCCCHHHHHHHHHHHHhc
Confidence            1123677777777655543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=9.6e-40  Score=308.87  Aligned_cols=250  Identities=21%  Similarity=0.274  Sum_probs=201.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++ ++++.+++.+                 .+.++.++.+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~   86 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-----------------NGSDAACVKA   86 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH-----------------hCCCeEEEEc
Confidence            456889999999999999999999999999999999998764 4555555543                 2457889999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+   +.|+||++
T Consensus        87 D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~i  162 (283)
T 1g0o_A           87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE---IGGRLILM  162 (283)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC---TTCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCeEEEE
Confidence            999999999999999999999999999999976 57788999999999999999999999999999993   46899999


Q ss_pred             cCCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH---H
Q 016493          207 DGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET---V  282 (388)
Q Consensus       207 sS~~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~---v  282 (388)
                      ||. ++..+.+ +...|++||+++++|+++++.|++++||+||+|+||+|+|++..........   ......++.   .
T Consensus       163 sS~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~  238 (283)
T 1g0o_A          163 GSI-TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIP---NGENLSNEEVDEY  238 (283)
T ss_dssp             CCG-GGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGST---TCTTCCHHHHHHH
T ss_pred             ech-hhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccc---cccccCHHHHHHH
Confidence            997 4555554 4889999999999999999999999999999999999999985431100000   000001111   1


Q ss_pred             H---HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 A---RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 A---~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .   ..+++++..|++++..+.||+++...+.+|..+..||++
T Consensus       239 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          239 AAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            1   124456778888898889999988767777777777765

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-39  Score=314.59  Aligned_cols=243  Identities=16%  Similarity=0.176  Sum_probs=200.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++.+.                .+.++.++++|++
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~  107 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR----------------RPNSAITVQADLS  107 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCS
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh----------------cCCeEEEEEeeCC
Confidence            7899999999999999999999999999999999 9999888887777532                2357889999999


Q ss_pred             CHH-----------------HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCC--------------HHHHHHHHHh
Q 016493          130 EPA-----------------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT--------------NEEIEQIVST  178 (388)
Q Consensus       130 ~~~-----------------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~--------------~~~~~~~~~v  178 (388)
                      |++                 +++++++++.+++|++|+||||||+.. ..++.+.+              .++|++++++
T Consensus       108 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~v  186 (328)
T 2qhx_A          108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGS  186 (328)
T ss_dssp             SSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHH
T ss_pred             CchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHH
Confidence            999                 999999999999999999999999976 56777888              8999999999


Q ss_pred             hchHHHHHHHHHHHHHHcCCC-----CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 016493          179 NLVGSILCTREAMRVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG  253 (388)
Q Consensus       179 N~~g~~~l~~~~lp~m~~~~~-----~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG  253 (388)
                      |+.++++++++++|.|++++.     .|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||
T Consensus       187 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  265 (328)
T 2qhx_A          187 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG  265 (328)
T ss_dssp             HTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECch-hhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            999999999999999987631     6899999998 6778888999999999999999999999999999999999999


Q ss_pred             cccccccccCccchhhhhhhhhccCHHHHHHHHhh-hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          254 MVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       254 ~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +|+|++ ... .   .....       .....++. ++..|++++..+.||+++...+.+|..+..||++.
T Consensus       266 ~v~T~~-~~~-~---~~~~~-------~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          266 LSVLVD-DMP-P---AVWEG-------HRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             SBSCCC-CSC-H---HHHHH-------HHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccCCc-ccc-H---HHHHH-------HHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            999998 321 1   00000       00112334 55667777777778888776666777777777763

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6e-40  Score=307.34  Aligned_cols=238  Identities=23%  Similarity=0.293  Sum_probs=193.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++                    ..++.++++|++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   62 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL--------------------EAEAIAVVADVS   62 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--------------------CSSEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------cCceEEEEcCCC
Confidence            468999999999999999999999999999999999988776554432                    245888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.| ++  .|+||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~  138 (263)
T 2a4k_A           63 DPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSV  138 (263)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCC
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecc
Confidence            999999999999999999999999999976 5778899999999999999999999999999999 44  6899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++. +.++...|++||+++++|+++++.|++++||+||+|+||+|+|++..........          ......++++
T Consensus       139 -~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----------~~~~~~p~~~  206 (263)
T 2a4k_A          139 -AGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWE----------QEVGASPLGR  206 (263)
T ss_dssp             -TTC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHH----------HHHHTSTTCS
T ss_pred             -hhc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHH----------HHHhcCCCCC
Confidence             455 6777889999999999999999999999999999999999999986542110000          0011123345


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|++++..+.|++++...+.++..+..||++.
T Consensus       207 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          207 AGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCCEEEECCCcc
Confidence            5566677777777777776666777777777764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.8e-41  Score=311.23  Aligned_cols=239  Identities=23%  Similarity=0.243  Sum_probs=182.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.++..   ++                    .+.++.++++|
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~--------------------~~~~~~~~~~D   60 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---AD--------------------LGDRARFAAAD   60 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HH--------------------TCTTEEEEECC
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hh--------------------cCCceEEEECC
Confidence            36789999999999999999999999999999999999765432   11                    23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCC---CCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-------
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-------  197 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------  197 (388)
                      ++|+++++++++.+.+ +|++|+||||||+..+.   .+..+.+.++|++++++|+.++++++++++|.|+++       
T Consensus        61 ~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~  139 (257)
T 3tl3_A           61 VTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNA  139 (257)
T ss_dssp             TTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CC
T ss_pred             CCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccccccc
Confidence            9999999999998877 99999999999985421   122358999999999999999999999999999872       


Q ss_pred             CCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc
Q 016493          198 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  277 (388)
Q Consensus       198 ~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  277 (388)
                      .+.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++............      
T Consensus       140 ~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~------  212 (257)
T 3tl3_A          140 EERGVIINTASV-AAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASL------  212 (257)
T ss_dssp             CCSEEEEEECCC-C--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHH------
T ss_pred             CCCcEEEEEcch-hhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHH------
Confidence            357899999998 6777888889999999999999999999999999999999999999998754322111111      


Q ss_pred             CHHHHHHHHh-hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          278 LPETVARTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       278 ~pe~vA~~~l-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                          ....+. .++..|+|++..+.||+++  .+.+|..+..||++.
T Consensus       213 ----~~~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vdGG~~  253 (257)
T 3tl3_A          213 ----GKQVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAIR  253 (257)
T ss_dssp             ----HHTSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC-
T ss_pred             ----HhcCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEECCCcc
Confidence                111122 4455566666666666654  356666777777663

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.2e-39  Score=304.77  Aligned_cols=250  Identities=22%  Similarity=0.293  Sum_probs=200.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++                    ..++.++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~   65 (263)
T 3ak4_A            6 GIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL--------------------ENGGFAVEV   65 (263)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--------------------TTCCEEEEC
T ss_pred             cCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--------------------hcCCeEEEE
Confidence            345688999999999999999999999999999999999988776554332                    125778999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++..++||++
T Consensus        66 D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~i  144 (263)
T 3ak4_A           66 DVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNT  144 (263)
T ss_dssp             CTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred             eCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            999999999999999999999999999999876 5778899999999999999999999999999999987436999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH-----
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-----  281 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-----  281 (388)
                      ||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++........    .......+++     
T Consensus       145 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~  219 (263)
T 3ak4_A          145 ASL-AAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWE----AELRGMTPEAVRAEY  219 (263)
T ss_dssp             CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHH----HHHHTSCHHHHHHHH
T ss_pred             ccc-ccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcccc----ccccccCcHHHHHHH
Confidence            997 567778888999999999999999999999999999999999999999853211000    0000000011     


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ....+++++..|++++..+.|++++...+.++..+..+|++
T Consensus       220 ~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          220 VSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGV  260 (263)
T ss_dssp             HHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence            11123455667778888788888776655666666666664

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=9.6e-40  Score=314.67  Aligned_cols=243  Identities=21%  Similarity=0.244  Sum_probs=206.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------hHHHHHHHHHHHHHHhhhhhhcCCCCcccccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS----------SESVRMTVTELEENLKEGMMAAGGSSKKNLVH  118 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~----------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~  118 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+          .+++++..+++.+                 .+
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~   85 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-----------------AG   85 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-----------------TT
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh-----------------cC
Confidence            35789999999999999999999999999999999998          6777777777755                 34


Q ss_pred             ceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 016493          119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  198 (388)
Q Consensus       119 ~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  198 (388)
                      .++.++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++.+
T Consensus        86 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~  164 (322)
T 3qlj_A           86 GEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLS  164 (322)
T ss_dssp             CEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcc
Confidence            67899999999999999999999999999999999999987 57889999999999999999999999999999998532


Q ss_pred             -----CCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhh
Q 016493          199 -----KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN  273 (388)
Q Consensus       199 -----~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  273 (388)
                           ..|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+|| +.|++..........    
T Consensus       165 ~~~~~~~g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~----  238 (322)
T 3qlj_A          165 KAGKAVDGRIINTSSG-AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA----  238 (322)
T ss_dssp             HTTCCCCEEEEEECCH-HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------
T ss_pred             ccCCCCCcEEEEEcCH-HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh----
Confidence                 24799999997 6677788899999999999999999999999999999999999 999987543221100    


Q ss_pred             hhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          274 IICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       274 ~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                          .+     ....+...|++++..+.||+++...+.+|..+..||++..
T Consensus       239 ----~~-----~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          239 ----TQ-----DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             --------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             ----cc-----ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence                00     0011234788888889999999988888888888887743

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2e-39  Score=306.39  Aligned_cols=248  Identities=12%  Similarity=0.111  Sum_probs=203.6

Q ss_pred             ccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           48 HCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        48 ~~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +.++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+.                 ..++.+++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~-----------------~~~~~~~~   81 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-----------------FNPAAVLP   81 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG-----------------GCCSEEEE
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh-----------------cCCceEEE
Confidence            456889999999988  7899999999999999999999987  33334444332                 23578899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                      +|++|+++++++++++.++++++|+||||||+...   ..++.+ .+.++|++++++|+.++++++++++|.|+++  .|
T Consensus        82 ~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g  159 (280)
T 3nrc_A           82 CDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NA  159 (280)
T ss_dssp             CCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TC
T ss_pred             eecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CC
Confidence            99999999999999999999999999999998652   144455 8999999999999999999999999999876  68


Q ss_pred             EEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          202 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       202 ~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                      +||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........  ..      ....
T Consensus       160 ~iv~isS~-~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~------~~~~  230 (280)
T 3nrc_A          160 SMVALTYI-GAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFK--KM------LDYN  230 (280)
T ss_dssp             EEEEEECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHH--HH------HHHH
T ss_pred             eEEEEecc-ccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchH--HH------HHHH
Confidence            99999998 678888999999999999999999999999999999999999999999865432110  00      0111


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      ....++++...|++++..+.||+++...+.+|..+..||++...
T Consensus       231 ~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          231 AMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             HHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcccc
Confidence            22334566677888888888999988877888888888887543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-40  Score=304.69  Aligned_cols=242  Identities=15%  Similarity=0.211  Sum_probs=196.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   62 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--------------------GERSMFVRHDVS   62 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEEECCCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCceEEEEccCC
Confidence            468999999999999999999999999999999999988877665543                    245788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ + ++||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~  139 (253)
T 1hxh_A           63 SEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASV  139 (253)
T ss_dssp             CHHHHHHHHHHHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcch
Confidence            999999999999999999999999999876 5788899999999999999999999999999999987 3 999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC--CeEEEEEecCcccccccccCcc-chhhh-hhhhhccCHHHHHHH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS--KVGVHTASPGMVLTDLLLSGST-IQNKQ-MFNIICELPETVART  285 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~--gI~vn~v~PG~v~T~~~~~~~~-~~~~~-~~~~~~~~pe~vA~~  285 (388)
                       ++..+.++...|++||+++++|+++++.|++++  ||+||+|+||+++||+...... ..... +...    +   ...
T Consensus       140 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~----~---~~~  211 (253)
T 1hxh_A          140 -SSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHD----P---KLN  211 (253)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCB----T---TTB
T ss_pred             -hhcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhh----h---ccC
Confidence             677788889999999999999999999999988  9999999999999998543110 00000 0000    0   011


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..|++++..+.|++++...+.++..+..||++
T Consensus       212 p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          212 RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             ccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            2334455666666666777776655666666666665

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1e-39  Score=307.31  Aligned_cols=241  Identities=21%  Similarity=0.231  Sum_probs=190.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|++|||||++|||+++|++|+++|++|++++| ++++++++.+++.+.                .+.++.++++|+
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   71 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA----------------RAGSAVLCKGDL   71 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh----------------cCCceEEEeccC
Confidence            468899999999999999999999999999999999 988888887777542                135688999999


Q ss_pred             CCH----HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCH-----------HHHHHHHHhhchHHHHHHHHHHHH
Q 016493          129 CEP----ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-----------EEIEQIVSTNLVGSILCTREAMRV  193 (388)
Q Consensus       129 s~~----~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-----------~~~~~~~~vN~~g~~~l~~~~lp~  193 (388)
                      +|+    ++++++++++.+++|++|+||||||+.. ..++.+.+.           ++|++++++|+.++++++++++|.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  150 (276)
T 1mxh_A           72 SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARR  150 (276)
T ss_dssp             SSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            999    9999999999999999999999999876 567778888           999999999999999999999999


Q ss_pred             HHcCCCC------cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch
Q 016493          194 MRDQPKG------GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ  267 (388)
Q Consensus       194 m~~~~~~------g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~  267 (388)
                      |+ + +.      ++||++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|| . ......
T Consensus       151 ~~-~-~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~~~~  225 (276)
T 1mxh_A          151 QG-E-GGAWRSRNLSVVNLCDA-MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMPQET  225 (276)
T ss_dssp             C---------CCCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSCHHH
T ss_pred             Hh-c-CCCCCCCCcEEEEECch-hhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCCHHH
Confidence            98 4 34      899999998 677788889999999999999999999999999999999999999999 2 111100


Q ss_pred             hhhhhhhhccCHHHHHHHHhhh-hhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          268 NKQMFNIICELPETVARTLVPR-IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       268 ~~~~~~~~~~~pe~vA~~~l~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...+          ....++.+ +..|++++..+.|++++...+.+|..+..||++
T Consensus       226 ~~~~----------~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          226 QEEY----------RRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             HHHH----------HTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHH----------HhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            0000          00112334 455666666666777766555566666666665

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=7.6e-40  Score=304.14  Aligned_cols=243  Identities=22%  Similarity=0.257  Sum_probs=203.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||+++|++|+++|++|+++ .|+.+++++..+++.+                 .+.++.++.+|+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   66 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-----------------NGGSAFSIGANL   66 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-----------------cCCceEEEecCc
Confidence            4689999999999999999999999999999885 7888888888777765                 346789999999


Q ss_pred             CCHHHHHHHHHHHHhhcC------CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          129 CEPADVQKLSNFAVNEFG------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g------~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      +|.++++++++++.+.++      ++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++   .++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~  142 (255)
T 3icc_A           67 ESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSR  142 (255)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEE
T ss_pred             CCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCE
Confidence            999999999999988764      4999999999976 678889999999999999999999999999999953   589


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........  ..      ....
T Consensus       143 iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~------~~~~  213 (255)
T 3icc_A          143 IINISSA-ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--MK------QYAT  213 (255)
T ss_dssp             EEEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH--HH------HHHH
T ss_pred             EEEeCCh-hhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH--HH------Hhhh
Confidence            9999998 6788889999999999999999999999999999999999999999998765332110  00      0111


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...+++++..|++++..+.||+++...+.+|..+..||++
T Consensus       214 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          214 TISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             ccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            1223456667778888888888888777777777777765

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.3e-39  Score=300.81  Aligned_cols=243  Identities=21%  Similarity=0.222  Sum_probs=187.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+.         +                 . ..+.++.+|+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~-----------------~-~~~~~~~~D~   55 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E-----------------Q-YPFATEVMDV   55 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S-----------------C-CSSEEEECCT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h-----------------c-CCceEEEcCC
Confidence            56889999999999999999999999999999999998641         0                 0 1267889999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        56 ~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS  133 (250)
T 2fwm_X           56 ADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVAS  133 (250)
T ss_dssp             TCHHHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECc
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999877 4789999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhh-hhhccCHHHHHHHHh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLV  287 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~pe~vA~~~l  287 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++........ .... .............++
T Consensus       134 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~  211 (250)
T 2fwm_X          134 D-AAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD-DAEEQRIRGFGEQFKLGIPL  211 (250)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------
T ss_pred             h-hhCCCCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh-hHHHHHHhhhhhcccccCCC
Confidence            8 677788889999999999999999999999999999999999999999864321100 0000 000000000012345


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++..|++++..+.|++++...+.++..+..||++
T Consensus       212 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          212 GKIARPQEIANTILFLASDLASHITLQDIVVDGGS  246 (250)
T ss_dssp             ----CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            66778888888888998887766677777777765

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=5.9e-38  Score=301.88  Aligned_cols=228  Identities=22%  Similarity=0.369  Sum_probs=191.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++....               .+.++.++.+|+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl   68 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG---------------SGPEVMGVQLDV   68 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---------------CGGGEEEEECCT
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------------CCCeEEEEECCC
Confidence            46789999999999999999999999999999999999999998888876531               124789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CCCcEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHI  203 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~~g~I  203 (388)
                      +|+++++++++++.+.+|++|+||||||+.. .+++.+.+.+++++++++|+.|+++++++++|.|+++     .+.|+|
T Consensus        69 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  147 (319)
T 3ioy_A           69 ASREGFKMAADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHV  147 (319)
T ss_dssp             TCHHHHHHHHHHHHHHTCCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEE
T ss_pred             CCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEE
Confidence            9999999999999999999999999999977 6889999999999999999999999999999999864     247899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh--------------
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK--------------  269 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--------------  269 (388)
                      |++||. ++..+.++...|++||+|+++|+++++.|+.+.||+|++|+||+|+|++..........              
T Consensus       148 V~isS~-a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (319)
T 3ioy_A          148 VNTASM-AAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVE  226 (319)
T ss_dssp             EEECCG-GGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---------------------------
T ss_pred             EEeccc-ccccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHH
Confidence            999998 67888899999999999999999999999999999999999999999987643211100              


Q ss_pred             hhhh--hhccCHHHHHHHHhhhhhhc
Q 016493          270 QMFN--IICELPETVARTLVPRIRVV  293 (388)
Q Consensus       270 ~~~~--~~~~~pe~vA~~~l~~~~~~  293 (388)
                      ....  ....+|+++|+.++..+..+
T Consensus       227 ~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          227 RLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             --CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             HHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence            0000  11258999999999888654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-38  Score=300.55  Aligned_cols=229  Identities=23%  Similarity=0.291  Sum_probs=192.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++++|+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl   71 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----------------NHENVVFHQLDV   71 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------TCCSEEEEECCT
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------CCCceEEEEccC
Confidence            3568999999999999999999999999999999999999998888887552                235789999999


Q ss_pred             CCH-HHHHHHHHHHHhhcCCccEEEEccccCCC-----------------------------CCCcCCCCHHHHHHHHHh
Q 016493          129 CEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKG-----------------------------FKPLLQFTNEEIEQIVST  178 (388)
Q Consensus       129 s~~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----------------------------~~~~~~~~~~~~~~~~~v  178 (388)
                      +|+ ++++++++.+.++++++|+||||||+...                             ..++.+.+.+++++++++
T Consensus        72 ~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (311)
T 3o26_A           72 TDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKI  151 (311)
T ss_dssp             TSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheee
Confidence            998 99999999999999999999999998631                             124567789999999999


Q ss_pred             hchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC------------------------------------------
Q 016493          179 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------------------------------------------  216 (388)
Q Consensus       179 N~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~------------------------------------------  216 (388)
                      |+.|+++++++++|.|+++ +.++||++||. ++..+.                                          
T Consensus       152 N~~g~~~l~~~~~~~l~~~-~~~~IV~isS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (311)
T 3o26_A          152 NYNGVKSVTEVLIPLLQLS-DSPRIVNVSSS-TGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW  229 (311)
T ss_dssp             HTHHHHHHHHHHHHHHTTS-SSCEEEEECCG-GGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC
T ss_pred             eeehHHHHHHHhhHhhccC-CCCeEEEEecC-CcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC
Confidence            9999999999999999887 57899999997 343322                                          


Q ss_pred             -CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhccc
Q 016493          217 -PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKG  295 (388)
Q Consensus       217 -~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~  295 (388)
                       ++...|++||+|+++|+++++.|+.+  |+||+|+||+|+|++.....           ..+|+++|+.++.....+++
T Consensus       230 ~~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~-----------~~~~~~~a~~~~~~~~~~~~  296 (311)
T 3o26_A          230 PSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG-----------NYTAEEGAEHVVRIALFPDD  296 (311)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC-----------SBCHHHHHHHHHHHHTCCSS
T ss_pred             cccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCCC-----------CCCHHHHHHHHHHHHhCCCC
Confidence             35678999999999999999999974  99999999999999865422           13799999999999888888


Q ss_pred             cccceeeccCHHH
Q 016493          296 SGKAINYLTPPRI  308 (388)
Q Consensus       296 ~~~~~~~l~~~~~  308 (388)
                      ......|++++..
T Consensus       297 ~~~g~~~~~s~~a  309 (311)
T 3o26_A          297 GPSGFFYDCSELS  309 (311)
T ss_dssp             CCCSCEETC----
T ss_pred             CCCceEecccccc
Confidence            8888888887754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-39  Score=304.70  Aligned_cols=249  Identities=14%  Similarity=0.130  Sum_probs=198.7

Q ss_pred             hcccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           46 EEHCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ....++++|++|||||+  +|||+++|++|+++|++|++++|+.... +..+++.+.                 ..++.+
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~-----------------~~~~~~   68 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAE-----------------FGSELV   68 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHH-----------------TTCCCE
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHH-----------------cCCcEE
Confidence            34568899999999998  9999999999999999999999995443 334444332                 134788


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCC---CCcCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      +++|++|+++++++++++.+++|++|+||||||+..+.   .++.+ .+.++|++++++|+.++++++++++|.|++   
T Consensus        69 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---  145 (271)
T 3ek2_A           69 FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---  145 (271)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---
T ss_pred             EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---
Confidence            99999999999999999999999999999999986521   45555 899999999999999999999999999974   


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  279 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  279 (388)
                      .|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ..
T Consensus       146 ~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~------~~  216 (271)
T 3ek2_A          146 DASLLTLSYL-GAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF--GKI------LD  216 (271)
T ss_dssp             EEEEEEEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH--HHH------HH
T ss_pred             CceEEEEecc-ccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch--HHH------HH
Confidence            5899999998 67788899999999999999999999999999999999999999999986543211  000      01


Q ss_pred             HHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          280 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       280 e~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ......+++++..|++++..+.||+++...+.+|..+..||++..
T Consensus       217 ~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~  261 (271)
T 3ek2_A          217 FVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNA  261 (271)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGG
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeee
Confidence            122233456667778888888888888877778888888888743

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=6e-38  Score=291.21  Aligned_cols=216  Identities=27%  Similarity=0.378  Sum_probs=175.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.++.+|++|+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~~~~   60 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--------------------GDNLYIAQLDVRNRAA   60 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCTTCHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------cCceEEEEcCCCCHHH
Confidence            68999999999999999999999999999999998877665544                    1358889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||. ++.
T Consensus        61 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~  138 (248)
T 3asu_A           61 IEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGST-AGS  138 (248)
T ss_dssp             HHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG-GGT
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccc-hhc
Confidence            9999999999999999999999986324678899999999999999999999999999999876 46899999998 677


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-ccccccCcc-ch---hhhhhhhhccCHHHHHHHHhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLLSGST-IQ---NKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~-T~~~~~~~~-~~---~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      .+.++...|++||+++++|+++++.|++++||+||+|+||+|+ |++...... ..   ..........+|+++|+.++.
T Consensus       139 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~  218 (248)
T 3asu_A          139 WPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW  218 (248)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHH
Confidence            7888899999999999999999999999999999999999999 998542110 00   000111122467777776665


Q ss_pred             hhh
Q 016493          289 RIR  291 (388)
Q Consensus       289 ~~~  291 (388)
                      .+.
T Consensus       219 l~s  221 (248)
T 3asu_A          219 VST  221 (248)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=2.1e-38  Score=296.22  Aligned_cols=189  Identities=26%  Similarity=0.397  Sum_probs=172.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++.++++|++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~D~~   63 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--------------------DAARYVHLDVT   63 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--------------------GGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--------------------cCceEEEecCC
Confidence            4789999999999999999999999999999999999988776554431                    24788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||.
T Consensus        64 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  141 (260)
T 1nff_A           64 QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSI  141 (260)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeeh
Confidence            999999999999999999999999999876 5778899999999999999999999999999999876 47899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|.|++..
T Consensus       142 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          142 -EGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             -hhcCCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence             667788888999999999999999999999999999999999999999854

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.1e-39  Score=303.51  Aligned_cols=194  Identities=28%  Similarity=0.417  Sum_probs=168.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++|++|||||++|||+++|++|+++|++|++. .|+.++++++.+++.+                 .+.++.++.+|++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   86 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-----------------SGGEAVAIPGDVG   86 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCTT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            468999999999999999999999999999876 7888888877777654                 3467999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC--CCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ--PKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~~g~Iv~is  207 (388)
                      |.++++++++++.++++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|++.  ++.|+||++|
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is  166 (272)
T 4e3z_A           87 NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVS  166 (272)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEc
Confidence            99999999999999999999999999997644778899999999999999999999999999999873  3468999999


Q ss_pred             CCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |. ++..+.+ ....|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       167 S~-~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          167 SM-AAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             CT-HHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             ch-HhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence            97 4444444 678899999999999999999999999999999999999998654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1e-37  Score=294.39  Aligned_cols=246  Identities=21%  Similarity=0.286  Sum_probs=201.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..++                    .+.++.++++|+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dv   60 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA--------------------YPDRAEAISLDV   60 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH--------------------CTTTEEEEECCT
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------------------ccCCceEEEeeC
Confidence            346789999999999999999999999999999999999887765443                    235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.++||++||
T Consensus        61 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS  138 (281)
T 3m1a_A           61 TDGERIDVVAADVLARYGRVDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISS  138 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcC
Confidence            9999999999999999999999999999976 5788899999999999999999999999999999987 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-------hhhhh---hh-----
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-------QNKQM---FN-----  273 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-------~~~~~---~~-----  273 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.......       .....   ..     
T Consensus       139 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (281)
T 3m1a_A          139 F-GGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGS  217 (281)
T ss_dssp             G-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-
T ss_pred             c-cccCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhc
Confidence            8 67788889999999999999999999999999999999999999999986532110       00000   00     


Q ss_pred             --hhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhc
Q 016493          274 --IICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRR  319 (388)
Q Consensus       274 --~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  319 (388)
                        ....+|+++|+.++..+..+.  .....++.++...+.++.....+
T Consensus       218 ~~~~~~~~~dva~a~~~~~~~~~--~~~~~~l~s~~~~~i~g~~~~i~  263 (281)
T 3m1a_A          218 DGSQPGDPAKAAAAIRLALDTEK--TPLRLALGGDAVDFLTGHLDSVR  263 (281)
T ss_dssp             ----CBCHHHHHHHHHHHHHSSS--CCSEEEESHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHhCCC--CCeEEecCchHHHHHHHHHHHHH
Confidence              012479999999887775443  23356777777766655544433

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=7.7e-39  Score=298.92  Aligned_cols=234  Identities=21%  Similarity=0.295  Sum_probs=185.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.                 +.++.++++|++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~Dv~   64 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-----------------GGQCVPVVCDSS   64 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------------SSEEEEEECCTT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-----------------CCceEEEECCCC
Confidence            467899999999999999999999999999999999999888887777542                 357889999999


Q ss_pred             CHHHHHHHHHHHHhh-cCCccEEEEccc--cC----CCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          130 EPADVQKLSNFAVNE-FGSIDIWINNAG--TN----KGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~-~g~iD~li~nAG--~~----~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      |+++++++++++.++ +|++|+||||||  +.    ....++.+.+.++|++++++|+.++++++++++|.|+++ +.|+
T Consensus        65 ~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~  143 (260)
T 2qq5_A           65 QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGL  143 (260)
T ss_dssp             SHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCE
T ss_pred             CHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcE
Confidence            999999999999886 899999999995  32    014567888999999999999999999999999999877 4799


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      ||++||. ++..+ ++...|++||+++++|+++++.|++++||+||+|+||+|+|++...............     ...
T Consensus       144 iv~isS~-~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-----~~~  216 (260)
T 2qq5_A          144 IVVISSP-GSLQY-MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV-----LKQ  216 (260)
T ss_dssp             EEEECCG-GGTSC-CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------
T ss_pred             EEEEcCh-hhcCC-CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhH-----HHH
Confidence            9999997 44443 3468899999999999999999999999999999999999998643211100000000     000


Q ss_pred             HHHHhhhhhhccccccceeeccCHHH
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRI  308 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~  308 (388)
                      ...++.+...|++++..+.||+++..
T Consensus       217 ~~~~~~~~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          217 FKSAFSSAETTELSGKCVVALATDPN  242 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHTCTT
T ss_pred             HHhhhccCCCHHHHHHHHHHHhcCcc
Confidence            12234556778888888888887754

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.5e-37  Score=284.00  Aligned_cols=216  Identities=24%  Similarity=0.329  Sum_probs=184.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++++|++|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~   64 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE----------------QGVEVFYHHLDVSKA   64 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCTTCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCeEEEEEeccCCH
Confidence            4799999999999999999999999999999999999999888887643                246789999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++  .+++|+++|. .
T Consensus        65 ~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~-~  140 (235)
T 3l77_A           65 ESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSD-V  140 (235)
T ss_dssp             HHHHHHCC-HHHHHSSCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCG-G
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecc-h
Confidence            9999999999999999999999999977 6888999999999999999999999999999999654  5788888887 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      +..+.+....|++||+++++|+++++  +...||+||+|+||+|+|++..........    ....+|+++|+.++..+.
T Consensus       141 ~~~~~~~~~~Y~~sKaa~~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~p~dva~~v~~l~~  214 (235)
T 3l77_A          141 SARLIPYGGGYVSTKWAARALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGKPKE----KGYLKPDEIAEAVRCLLK  214 (235)
T ss_dssp             GSSCCTTCHHHHHHHHHHHHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCCCGG----GTCBCHHHHHHHHHHHHT
T ss_pred             hcccCCCcchHHHHHHHHHHHHHHHh--hcCCCeEEEEEeCCccccccccccCCcccc----cCCCCHHHHHHHHHHHHc
Confidence            66778888999999999999999994  446799999999999999987654332111    123478888887776554


Q ss_pred             hc
Q 016493          292 VV  293 (388)
Q Consensus       292 ~~  293 (388)
                      .+
T Consensus       215 ~~  216 (235)
T 3l77_A          215 LP  216 (235)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=5.2e-39  Score=297.79  Aligned_cols=240  Identities=20%  Similarity=0.320  Sum_probs=180.2

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ....+.++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    ..++.++.
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~   66 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL--------------------KDNYTIEV   66 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CSSEEEEE
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------ccCccEEE
Confidence            3456889999999999999999999999999999999999999887766554                    24678899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|.+++++++++    ++++|++|||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||+
T Consensus        67 ~D~~~~~~~~~~~~~----~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~  140 (249)
T 3f9i_A           67 CNLANKEECSNLISK----TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIIN  140 (249)
T ss_dssp             CCTTSHHHHHHHHHT----CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             cCCCCHHHHHHHHHh----cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE
Confidence            999999999887754    478999999999976 5677788999999999999999999999999999877 5789999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........          ......
T Consensus       141 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----------~~~~~~  209 (249)
T 3f9i_A          141 ISSI-VGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQRE----------AIVQKI  209 (249)
T ss_dssp             ECCC-CC--CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHH----------HHHHHC
T ss_pred             EccH-HhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHH----------HHHhcC
Confidence            9998 67888899999999999999999999999999999999999999999987543221111          111223


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++++..+++++..+.||+++...+.+|..+..+|++
T Consensus       210 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          210 PLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence            3445556666777777777777656666666666665

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.7e-38  Score=293.79  Aligned_cols=221  Identities=26%  Similarity=0.339  Sum_probs=178.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++ |++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 . .++.++++|++
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~-~~~~~~~~Dv~   79 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-----------------K-TRVLPLTLDVR   79 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-----------------T-SCEEEEECCTT
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----------------C-CcEEEEEcCCC
Confidence            345 9999999999999999999999999999999999888777665532                 1 46888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc-EEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG-HIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g-~Iv~isS  208 (388)
                      |+++++++++++.+++|++|+||||||+..+..++.+.+.++|++++++|+.++++++++++|.|+++ +.| +||++||
T Consensus        80 d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS  158 (272)
T 2nwq_A           80 DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGS  158 (272)
T ss_dssp             CHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCC
Confidence            99999999999999999999999999986523678899999999999999999999999999999877 357 9999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchh----hhhhhhhccCHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN----KQMFNIICELPETVAR  284 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~pe~vA~  284 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.........    .........+|+++|+
T Consensus       159 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~  237 (272)
T 2nwq_A          159 V-AGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAE  237 (272)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHH
T ss_pred             c-hhccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHH
Confidence            8 6777888889999999999999999999999999999999999999998643211000    0011111246777777


Q ss_pred             HHhhhhh
Q 016493          285 TLVPRIR  291 (388)
Q Consensus       285 ~~l~~~~  291 (388)
                      .++..+.
T Consensus       238 ~v~~l~s  244 (272)
T 2nwq_A          238 TIFWIMN  244 (272)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhC
Confidence            6665443

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=4.3e-39  Score=298.57  Aligned_cols=233  Identities=21%  Similarity=0.322  Sum_probs=181.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|+++||||++|||+++|++|+++|++|++++|++++++                            .+..+++|+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------------------~~~~~~~D~   62 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------------------GLFGVEVDV   62 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------------------TSEEEECCT
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------------------------HhcCeeccC
Confidence            4678999999999999999999999999999999999875431                            111388999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||
T Consensus        63 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS  140 (247)
T 1uzm_A           63 TDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGS  140 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEECC
Confidence            9999999999999999999999999999976 5778899999999999999999999999999999987 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++.............          ...++.
T Consensus       141 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~----------~~~p~~  209 (247)
T 1uzm_A          141 V-SGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGAL----------QFIPAK  209 (247)
T ss_dssp             C-CC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHG----------GGCTTC
T ss_pred             H-hhccCCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHH----------hcCCCC
Confidence            8 67777888899999999999999999999999999999999999999985432111000000          011223


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++..|++++..+.|++++...+.++..+..||++
T Consensus       210 ~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          210 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence            4445566666666777666555555566666654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.7e-39  Score=303.55  Aligned_cols=249  Identities=13%  Similarity=0.120  Sum_probs=199.6

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           50 KAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        50 ~~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.++. +++.++                    .+.++.++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~~   63 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--------------------LPAKAPLLEL   63 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--------------------SSSCCCEEEC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh--------------------cCCCceEEEc
Confidence            478999999999  99999999999999999999999997653 332211                    1245778999


Q ss_pred             cCCCHHHHHHHHHHHHhhcC---CccEEEEccccCCC----CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          127 DVCEPADVQKLSNFAVNEFG---SIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g---~iD~li~nAG~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      |++|+++++++++++.+++|   ++|+||||||+..+    ..++.+.+.++|++++++|+.++++++++++|.|++   
T Consensus        64 Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---  140 (269)
T 2h7i_A           64 DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---  140 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---
Confidence            99999999999999999999   99999999998642    357788999999999999999999999999999975   


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-hhhhhhhhhc-c
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIIC-E  277 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~-~  277 (388)
                      .|+||++||. .. .+.+.+..|++||+++++|+++++.|++++||+||+|+||+|+|++....... .......... .
T Consensus       141 ~g~iv~iss~-~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (269)
T 2h7i_A          141 GGSIVGMDFD-PS-RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL  218 (269)
T ss_dssp             EEEEEEEECC-CS-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHH
T ss_pred             CCeEEEEcCc-cc-cccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHH
Confidence            3799999987 33 66778899999999999999999999999999999999999999975421000 0000000000 0


Q ss_pred             CHHHHHHHHhh-hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          278 LPETVARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       278 ~pe~vA~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ........+++ ++..|+|++..+.||+++...+.+|..+..||++.
T Consensus       219 ~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          219 EEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             HHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence            00111233556 58889999999999999988788888888888864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.4e-39  Score=303.10  Aligned_cols=234  Identities=24%  Similarity=0.363  Sum_probs=180.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+++++                            ..+.++++|
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~~~~D   67 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------------------EGFLAVKCD   67 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------TTSEEEECC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------------------ccceEEEec
Confidence            3567899999999999999999999999999999999986532                            126778999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++|
T Consensus        68 l~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~is  145 (253)
T 2nm0_A           68 ITDTEQVEQAYKEIEETHGPVEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLIS  145 (253)
T ss_dssp             TTSHHHHHHHHHHHHHHTCSCSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEC
Confidence            99999999999999999999999999999976 5778888999999999999999999999999999876 478999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...........+.          ...++
T Consensus       146 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~----------~~~p~  214 (253)
T 2nm0_A          146 SV-VGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIV----------SQVPL  214 (253)
T ss_dssp             CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHH----------TTCTT
T ss_pred             ch-hhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHH----------hcCCC
Confidence            98 56667777889999999999999999999999999999999999999986432111000000          01122


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .++..|++++..+.|++++...+.++..+..||++
T Consensus       215 ~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          215 GRYARPEEIAATVRFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence            34445555666666666666555556566666654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-37  Score=296.91  Aligned_cols=193  Identities=23%  Similarity=0.352  Sum_probs=164.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-----hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      |++++|+++||||++|||+++|++|+++|++|++++|+     .++++++.+.+.+                 .+.++.+
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~-----------------~~~~~~~   63 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD-----------------NDVDLRT   63 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHH-----------------HTCCEEE
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHh-----------------cCCcEEE
Confidence            35678999999999999999999999999999988776     4555555444433                 2467899


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      +++|++|+++++++++++.+++|++|+||||||+.. .+++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+|
T Consensus        64 ~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~i  141 (324)
T 3u9l_A           64 LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLL  141 (324)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             EEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEE
Confidence            999999999999999999999999999999999977 6889999999999999999999999999999999987 57999


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      |++||..+...+.++...|++||+|+++|+++++.|+++.||+||+|+||.|.|++.
T Consensus       142 V~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          142 IWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             EEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             EEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            999998433345577889999999999999999999999999999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.2e-38  Score=297.28  Aligned_cols=194  Identities=25%  Similarity=0.273  Sum_probs=172.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~---~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++++|++|||||++|||+++|++|++   +|++|++++|+.++++++.+++.+..               .+.++.++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~   67 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ---------------PDLKVVLAAA   67 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTSEEEEEEC
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC---------------CCCeEEEEec
Confidence            57899999999999999999999999   89999999999999888887776531               1357899999


Q ss_pred             cCCCHHHHHHHHHHHHh--hcCCcc--EEEEccccCCCC-CCcCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CC
Q 016493          127 DVCEPADVQKLSNFAVN--EFGSID--IWINNAGTNKGF-KPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PK  199 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~--~~g~iD--~li~nAG~~~~~-~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~  199 (388)
                      |++|+++++++++++.+  .+|++|  +||||||+..+. .++.+ .+.++|++++++|+.|+++++++++|.|+++ ++
T Consensus        68 Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  147 (259)
T 1oaa_A           68 DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL  147 (259)
T ss_dssp             CTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC
T ss_pred             CCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            99999999999999988  778999  999999985422 45677 7899999999999999999999999999875 23


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      .|+||++||. ++..+.++...|++||+|+++|+++++.|+++  |+||+|+||+|+|++..
T Consensus       148 ~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~  206 (259)
T 1oaa_A          148 SKTVVNISSL-CALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQ  206 (259)
T ss_dssp             EEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHH
T ss_pred             CceEEEEcCc-hhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHH
Confidence            6899999998 67788889999999999999999999999974  99999999999999864

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.8e-39  Score=300.03  Aligned_cols=244  Identities=17%  Similarity=0.172  Sum_probs=195.8

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+.                . ..+.++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~----------------~-~~~~~~~~   65 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA----------------L-GGALLFRA   65 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH----------------T-TCCEEEEC
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh----------------c-CCcEEEEC
Confidence            45789999999999  99999999999999999999999975 44444455432                1 23678999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      |++|+++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.++++++++++|.|++   +|+|
T Consensus        66 D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~i  142 (261)
T 2wyu_A           66 DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGI  142 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEE
Confidence            9999999999999999999999999999998642   256788999999999999999999999999999974   4899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...... .. ...      .....
T Consensus       143 v~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~-~~~------~~~~~  213 (261)
T 2wyu_A          143 VTLTYY-ASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-FT-KMY------DRVAQ  213 (261)
T ss_dssp             EEEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT-HH-HHH------HHHHH
T ss_pred             EEEecc-cccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc-cH-HHH------HHHHh
Confidence            999997 6677888889999999999999999999999999999999999999998543211 00 000      00111


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..++.++..|++++..+.|++++...+.++..+..||++
T Consensus       214 ~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  252 (261)
T 2wyu_A          214 TAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGY  252 (261)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCc
Confidence            223455666777777777888776656666666666665

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-39  Score=297.72  Aligned_cols=238  Identities=18%  Similarity=0.250  Sum_probs=191.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++++++. ++                     .++.++++|++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~---------------------~~~~~~~~D~~   60 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY---------------------PGIQTRVLDVT   60 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS---------------------TTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc---------------------cCceEEEeeCC
Confidence            468999999999999999999999999999999999987654322 11                     25788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++    ++.++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||.
T Consensus        61 ~~~~~~----~~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  134 (246)
T 2ag5_A           61 KKKQID----QFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSV  134 (246)
T ss_dssp             CHHHHH----HHHHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS
T ss_pred             CHHHHH----HHHHHhCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEech
Confidence            999988    44456789999999999876 5778899999999999999999999999999999876 47899999998


Q ss_pred             CCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-h-hhhhhhhhccCHHHHHHHH
Q 016493          210 GSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-Q-NKQMFNIICELPETVARTL  286 (388)
Q Consensus       210 ~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~-~~~~~~~~~~~pe~vA~~~  286 (388)
                       ++..+.+ +...|++||+++++|+++++.|++++||+||+|+||+++||+....... . .....      .......+
T Consensus       135 -~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~  207 (246)
T 2ag5_A          135 -ASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEAR------NDFLKRQK  207 (246)
T ss_dssp             -BTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHH------HHHHHTCT
T ss_pred             -HhCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHH------HHHHhcCC
Confidence             5666666 8899999999999999999999999999999999999999975321100 0 00000      00111123


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++++..|++++..+.|++++...+.++..+..||++
T Consensus       208 ~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          208 TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            455667888888888888887766777777777765

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-38  Score=295.63  Aligned_cols=250  Identities=20%  Similarity=0.234  Sum_probs=200.2

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      ....+++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.                .+.++.++
T Consensus         6 ~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~   69 (265)
T 1h5q_A            6 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE----------------FGVKTKAY   69 (265)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH----------------HTCCEEEE
T ss_pred             CCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh----------------cCCeeEEE
Confidence            33456789999999999999999999999999999999999877766666665443                13568899


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|++|+++++++++++.++++++|+||||||... ..++.+.+.+++++++++|+.++++++++++|.|++++..++||
T Consensus        70 ~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv  148 (265)
T 1h5q_A           70 QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIV  148 (265)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             EeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEE
Confidence            99999999999999999999999999999999976 57788899999999999999999999999999998764468999


Q ss_pred             EecCCCCCCCCCC-------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc
Q 016493          205 NMDGAGSGGSSTP-------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  277 (388)
Q Consensus       205 ~isS~~~~~~~~~-------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  277 (388)
                      ++||. ++..+.+       +...|++||++++.|+++++.|++++||+||+|+||+|+|++..........        
T Consensus       149 ~~sS~-~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--------  219 (265)
T 1h5q_A          149 VTSSM-SSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--------  219 (265)
T ss_dssp             EECCG-GGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--------
T ss_pred             EeCCc-hhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHH--------
Confidence            99997 4444332       2678999999999999999999999999999999999999986542111000        


Q ss_pred             CHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          278 LPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                        ......+++++..+++++..+.|++++...+.++..+..+|++
T Consensus       220 --~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          220 --HQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             --HHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             --HHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCE
Confidence              0011123345667788888888888776544555555555543

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5e-38  Score=293.82  Aligned_cols=247  Identities=23%  Similarity=0.325  Sum_probs=186.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++.+|
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   71 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-----------------KGFQVTGSVCD   71 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECC
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeeEEEECC
Confidence            4678899999999999999999999999999999999999888877777654                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          128 VCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      ++|.++++++++++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|+++ +.++||++
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~i  149 (266)
T 1xq1_A           72 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFM  149 (266)
T ss_dssp             TTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999 89999999999876 5778889999999999999999999999999999876 46899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||++++.|+++++.|++++||+||+|+||++.|++......   ....      .......+
T Consensus       150 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~------~~~~~~~~  219 (266)
T 1xq1_A          150 SSI-AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFK------KVVISRKP  219 (266)
T ss_dssp             C-----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             ccc-hhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC---HHHH------HHHHhcCC
Confidence            997 5667778889999999999999999999999999999999999999998643211   0000      01111234


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +.++..+++++..+.|++++...+.++..+..+|++.
T Consensus       220 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          220 LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             ----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            5567788999999999998876566666666666653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=9.7e-39  Score=299.05  Aligned_cols=243  Identities=14%  Similarity=0.171  Sum_probs=194.8

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++|++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..                 ....++++|+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~-----------------~~~~~~~~D~   68 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL-----------------GSDIVLQCDV   68 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT-----------------TCCCEEECCT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc-----------------CCcEEEEccC
Confidence            789999999999  9999999999999999999999987 4444555554321                 1236789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|+++++++++++.+++|++|+||||||+..+   ..++.+ .+.++|++++++|+.++++++++++|.|++   +|+||
T Consensus        69 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv  145 (265)
T 1qsg_A           69 AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALL  145 (265)
T ss_dssp             TCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEE
Confidence            99999999999999999999999999998642   145667 899999999999999999999999999974   48999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...... . ....      ......
T Consensus       146 ~isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~-~~~~------~~~~~~  216 (265)
T 1qsg_A          146 TLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-F-RKML------AHCEAV  216 (265)
T ss_dssp             EEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT-H-HHHH------HHHHHH
T ss_pred             EEcch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc-c-HHHH------HHHHhc
Confidence            99997 6777888889999999999999999999999999999999999999998643211 0 0000      001112


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+++++..|++++..+.|++++...+.++..+..||++.
T Consensus       217 ~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          217 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             STTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcC
Confidence            234556677777777788888776566666666676653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.5e-38  Score=296.47  Aligned_cols=239  Identities=21%  Similarity=0.322  Sum_probs=195.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++                            +.++.++++|++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------------------~~~~~~~~~Dl~   56 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------------------EAKYDHIECDVT   56 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------------------SCSSEEEECCTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------------------CCceEEEEecCC
Confidence            4678999999999999999999999999999999998653                            135778999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||.
T Consensus        57 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~  134 (264)
T 2dtx_A           57 NPDQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-RDPSIVNISSV  134 (264)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCc
Confidence            999999999999999999999999999876 5788899999999999999999999999999999877 47999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch---hhh-hhhhhccCHHHHHHH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ---NKQ-MFNIICELPETVART  285 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~-~~~~~~~~pe~vA~~  285 (388)
                       ++..+.++...|++||+++++|+++++.|+++. |+||+|+||+++|++........   ... ....   ........
T Consensus       135 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  209 (264)
T 2dtx_A          135 -QASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKK---ISEWGHEH  209 (264)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHH---HHHHHHHS
T ss_pred             -hhccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHH---HHHHHhcC
Confidence             677788889999999999999999999999998 99999999999999854310000   000 0000   00011122


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++.++..|++++..+.|++++...+.++..+..+|++.
T Consensus       210 p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          210 PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            34556677888888888888776666777777777764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.5e-38  Score=293.25  Aligned_cols=233  Identities=23%  Similarity=0.316  Sum_probs=189.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||+++|++|+++|++|++++|+++++   .+++                    +  +.++++|++| +
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~--------------------~--~~~~~~D~~~-~   55 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL--------------------G--AVPLPTDLEK-D   55 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH--------------------T--CEEEECCTTT-S
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh--------------------C--cEEEecCCch-H
Confidence            68999999999999999999999999999999998752   1111                    1  5678999999 9


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||. ++
T Consensus        56 ~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~~  132 (239)
T 2ekp_A           56 DPKGLVKRALEALGGLHVLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSV-TT  132 (239)
T ss_dssp             CHHHHHHHHHHHHTSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-GG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECch-hh
Confidence            999999999999999999999999876 5788899999999999999999999999999999876 47999999997 55


Q ss_pred             CCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhh
Q 016493          213 GSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  290 (388)
Q Consensus       213 ~~~~--~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~  290 (388)
                      ..+.  ++...|++||+++++|+++++.|++++||+||+|+||+++|++......  ......      ......+++++
T Consensus       133 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~------~~~~~~p~~~~  204 (239)
T 2ekp_A          133 FTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ--NPELYE------PITARIPMGRW  204 (239)
T ss_dssp             TSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--CHHHHH------HHHTTCTTSSC
T ss_pred             ccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc--CHHHHH------HHHhcCCCCCC
Confidence            6666  7889999999999999999999999999999999999999998542110  000000      00011234455


Q ss_pred             hhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          291 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       291 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..|++++..+.|++++...+.++..+..||++
T Consensus       205 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          205 ARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            67777777777888877666666666666665

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=4e-38  Score=293.50  Aligned_cols=193  Identities=28%  Similarity=0.442  Sum_probs=175.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++| +.++++++.+++.+                 .+.++.++++|+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   66 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-----------------VGGEAIAVKGDV   66 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-----------------cCCceEEEECCC
Confidence            467899999999999999999999999999999999 88777777766654                 235788999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|++++..++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS  145 (261)
T 1gee_A           67 TVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS  145 (261)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence            9999999999999999999999999999876 567788999999999999999999999999999998743689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . ++..+.++...|++||++++.++++++.|++++||+||+|+||++.|++..
T Consensus       146 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  197 (261)
T 1gee_A          146 V-HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH
T ss_pred             H-HhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh
Confidence            8 667788889999999999999999999999999999999999999999864

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=6.1e-39  Score=296.94  Aligned_cols=232  Identities=16%  Similarity=0.157  Sum_probs=189.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-e--CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVA-S--RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~--R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ||+++||||++|||+++|++|+++|++|+++ +  |++++++++.+++ .                  +       +|+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~------------------~-------~~~~   54 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P------------------G-------TIAL   54 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T------------------T-------EEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C------------------C-------Cccc
Confidence            5899999999999999999999999999999 6  9988776654443 0                  1       1333


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCC---CCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |.++++++++++.+++|++|+||||||+.. .   .++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++
T Consensus        55 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~i  132 (244)
T 1zmo_A           55 AEQKPERLVDATLQHGEAIDTIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFI  132 (244)
T ss_dssp             CCCCGGGHHHHHGGGSSCEEEEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence            778888999999999999999999999876 5   678899999999999999999999999999999887 47999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc---ccCccchhhhhhhhhccCHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      ||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.   ......  ...       .+...
T Consensus       133 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~-------~~~~~  202 (244)
T 1zmo_A          133 TSS-VGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN--PEL-------RERVD  202 (244)
T ss_dssp             CCG-GGTSCCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC--HHH-------HHHHH
T ss_pred             CCh-hhCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch--HHH-------HHHHh
Confidence            998 67778888999999999999999999999999999999999999999986   321100  000       01111


Q ss_pred             -HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 -RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 -~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                       ..+++++..|++++..+.||+++...+.+|..+..||++
T Consensus       203 ~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          203 RDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             cCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence             234456667788888888888887777777777777765

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.2e-37  Score=289.95  Aligned_cols=194  Identities=23%  Similarity=0.282  Sum_probs=175.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++++|+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   71 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-----------------EGHDVSSVVMDV   71 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEecC
Confidence            578999999999999999999999999999999999999888877777654                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.++++++|+||||||+..+..++.+.+.+++++.+++|+.++++++++++|.|+++ +.++||++||
T Consensus        72 ~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS  150 (260)
T 3awd_A           72 TNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-KQGVIVAIGS  150 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEec
Confidence            999999999999999999999999999986534677889999999999999999999999999999876 4689999999


Q ss_pred             CCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLT--AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~--~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . ++..+.+..  ..|++||++++.|+++++.|++++||+||+|+||++.|++..
T Consensus       151 ~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          151 M-SGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             G-GGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             c-hhcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence            7 556666666  899999999999999999999999999999999999999864

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.1e-39  Score=305.71  Aligned_cols=258  Identities=19%  Similarity=0.195  Sum_probs=189.1

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      ..+.++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~   67 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM--------------------AGQVEVR   67 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS--------------------SSEEEEE
T ss_pred             hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------cCCeeEE
Confidence            34567899999999999999999999999999999999999998876654432                    3578999


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      ++|++|.++++++++++    +++|+||||||+..   +..+.+.+++++++++|+.|+++++++++|.|++     +||
T Consensus        68 ~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv  135 (291)
T 3rd5_A           68 ELDLQDLSSVRRFADGV----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVV  135 (291)
T ss_dssp             ECCTTCHHHHHHHHHTC----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEE
T ss_pred             EcCCCCHHHHHHHHHhc----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hee
Confidence            99999999999988766    78999999999854   3466788899999999999999999999999874     799


Q ss_pred             EecCCCCCCCC-------------CCCchhhHHHHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccccccccCccchhh
Q 016493          205 NMDGAGSGGSS-------------TPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLLSGSTIQNK  269 (388)
Q Consensus       205 ~isS~~~~~~~-------------~~~~~~Y~aSK~al~~l~~~la~el~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~  269 (388)
                      ++||. ++..+             .++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++..........
T Consensus       136 ~isS~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~  214 (291)
T 3rd5_A          136 TVSSM-AHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGD  214 (291)
T ss_dssp             EECCG-GGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------
T ss_pred             Eeech-hhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHH
Confidence            99997 33332             45667899999999999999999999877  9999999999999997653221111


Q ss_pred             hhhhhhccCHHHHHHHHhhhhhh-ccccccceeeccCHHHHHHHHHhHhhcCcccccc------ccchhccchhhhhccc
Q 016493          270 QMFNIICELPETVARTLVPRIRV-VKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ------GRALYAAEADRIRNWA  342 (388)
Q Consensus       270 ~~~~~~~~~pe~vA~~~l~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~w~  342 (388)
                      .           ..+.+..+... |++++..+.|+++++  +.+|..+..||++....      ......+..+++|+|.
T Consensus       215 ~-----------~~~~~~~~~~~~~~~~A~~~~~l~~~~--~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~  281 (291)
T 3rd5_A          215 A-----------LMSAATRVVATDADFGARQTLYAASQD--LPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALS  281 (291)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHSC--CCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHH
T ss_pred             H-----------HHHHHHHHHhCCHHHHHHHHHHHHcCC--CCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHH
Confidence            1           11112222222 444444444554442  44566677777775432      1223344566788887


Q ss_pred             cccccc
Q 016493          343 ENRARF  348 (388)
Q Consensus       343 e~~~~~  348 (388)
                      ++....
T Consensus       282 ~~~~~~  287 (291)
T 3rd5_A          282 EQLTKT  287 (291)
T ss_dssp             HHHHTC
T ss_pred             HHHHcc
Confidence            765433

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.8e-39  Score=299.11  Aligned_cols=235  Identities=17%  Similarity=0.166  Sum_probs=193.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~-~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++|++|||||++|||+++|++|++ .|++|++.+|+++.                           ....+.++++|++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~---------------------------~~~~~~~~~~Dv~   54 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------------------------SAENLKFIKADLT   54 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC---------------------------CCTTEEEEECCTT
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc---------------------------ccccceEEecCcC
Confidence            4689999999999999999999999 78999999987641                           1235788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++.+ + ++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++   |+||++||.
T Consensus        55 ~~~~v~~~~~~~-~-~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---g~iv~~sS~  128 (244)
T 4e4y_A           55 KQQDITNVLDII-K-NVSFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSD  128 (244)
T ss_dssp             CHHHHHHHHHHT-T-TCCEEEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE---EEEEEECCG
T ss_pred             CHHHHHHHHHHH-H-hCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC---cEEEEECCH
Confidence            999999999655 3 789999999999987 5788999999999999999999999999999999754   899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH-----HH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----AR  284 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v-----A~  284 (388)
                       ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+||+..........    .....+++.     ..
T Consensus       129 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  203 (244)
T 4e4y_A          129 -QCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYAN----NVGISFDEAQKQEEKE  203 (244)
T ss_dssp             -GGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHH----HHTCCHHHHHHHHHTT
T ss_pred             -HHccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhh----hcCCCHHHHHHHHhhc
Confidence             67888899999999999999999999999999999999999999999986432211100    000111111     12


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+++++..|++++..+.||+++...+.+|..+..||+|.
T Consensus       204 ~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          204 FPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence            244567788888888899999888778888888888764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=7.4e-38  Score=290.36  Aligned_cols=193  Identities=25%  Similarity=0.369  Sum_probs=172.4

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE-EE
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV-AG  123 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i-~~  123 (388)
                      ++..+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++                    +.++ .+
T Consensus         3 ~~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~   62 (254)
T 2wsb_A            3 YRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--------------------GAAVAAR   62 (254)
T ss_dssp             TTTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------GGGEEEE
T ss_pred             cccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------cccceeE
Confidence            34456789999999999999999999999999999999999998877665544                    1345 78


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      +.+|++|.++++++++++.+ ++++|+||||||... ..++.+.+.+++++++++|+.+++++++.++|.|+++ +.++|
T Consensus        63 ~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~i  139 (254)
T 2wsb_A           63 IVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAI  139 (254)
T ss_dssp             EECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             EEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            99999999999999999988 899999999999876 5778889999999999999999999999999999887 47899


Q ss_pred             EEecCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          204 FNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       204 v~isS~~~~~~~~~~~--~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      |++||. ++..+.+..  ..|++||++++.++++++.|++++||+|++|+||.+.|++..
T Consensus       140 v~isS~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~  198 (254)
T 2wsb_A          140 VNLGSM-SGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL  198 (254)
T ss_dssp             EEECCG-GGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHH
T ss_pred             EEEecc-hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhh
Confidence            999997 555666666  899999999999999999999999999999999999999864

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.6e-38  Score=307.74  Aligned_cols=229  Identities=15%  Similarity=0.161  Sum_probs=187.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHH------------HHHHHHHHHhhhhhhcCCCCccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRM------------TVTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~-~G~~Vil~~R~~~~l~~------------~~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      +...+|++||||||+|||+++|+.|++ +|++|++++|+.+.+++            ..+++++                
T Consensus        57 ~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~----------------  120 (422)
T 3s8m_A           57 RNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA----------------  120 (422)
T ss_dssp             CSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----------------
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh----------------
Confidence            334699999999999999999999999 99999999998765432            2233332                


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhc-CCccEEEEccccC------------CCCCCc------------------
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTN------------KGFKPL------------------  164 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~------------~~~~~~------------------  164 (388)
                       .+.++..+.+|++|+++++++++++.+++ |+||+||||||..            ....++                  
T Consensus       121 -~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~  199 (422)
T 3s8m_A          121 -AGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQ  199 (422)
T ss_dssp             -TTCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEE
T ss_pred             -cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccc
Confidence             34678899999999999999999999999 9999999999972            112344                  


Q ss_pred             ---CCCCHHHHHHHHHhhchHHH-HHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHH
Q 016493          165 ---LQFTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFK  238 (388)
Q Consensus       165 ---~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSK~al~~l~~~la~  238 (388)
                         .+.+.++|++++++|..+.+ .+++++++.+..+ ++|+||++||. ++..+.|.+  .+|++||+|+.+|+++|+.
T Consensus       200 ~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~-~gG~IVniSSi-~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~  277 (422)
T 3s8m_A          200 ASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLA-DGARSVAFSYI-GTEITWPIYWHGALGKAKVDLDRTAQRLNA  277 (422)
T ss_dssp             EEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE-EEEEEEEEEEC-CCGGGHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhh-CCCEEEEEeCc-hhhccCCCccchHHHHHHHHHHHHHHHHHH
Confidence               36899999999999999997 8888877653333 36899999998 566777766  8999999999999999999


Q ss_pred             HhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHH--HHHHHHhhhhhhccccccceeeccCHHH
Q 016493          239 ESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE--TVARTLVPRIRVVKGSGKAINYLTPPRI  308 (388)
Q Consensus       239 el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe--~vA~~~l~~~~~~~~~~~~~~~l~~~~~  308 (388)
                      |++++|||||+|+||+|+|++......            .|.  .....++++.+.|++++..+.||+++..
T Consensus       278 Ela~~GIRVNaVaPG~i~T~~~~~ip~------------~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l  337 (422)
T 3s8m_A          278 RLAKHGGGANVAVLKSVVTQASAAIPV------------MPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL  337 (422)
T ss_dssp             HHHTTTCEEEEEEECCCCCTTGGGSTH------------HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred             HhCccCEEEEEEEcCCCcChhhhcCCC------------ChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh
Confidence            999999999999999999998654321            111  2234578999999999999999998864

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=2.4e-36  Score=285.07  Aligned_cols=193  Identities=18%  Similarity=0.222  Sum_probs=172.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.++++|
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D   84 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--------------------GNRAEFVSTN   84 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECC
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------------------CCceEEEEcC
Confidence            45789999999999999999999999999999999999999887776654                    2468899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEc-cccCCCCCCc-----CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC----
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINN-AGTNKGFKPL-----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ----  197 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~n-AG~~~~~~~~-----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----  197 (388)
                      ++|.++++++++++ ++++++|++||| ||+.. ..++     .+.+.++|++++++|+.+++++++.++|.|.+.    
T Consensus        85 l~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  162 (281)
T 3ppi_A           85 VTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRE  162 (281)
T ss_dssp             TTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCT
T ss_pred             CCCHHHHHHHHHHH-HHhCCCCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccc
Confidence            99999999999999 888999999999 55544 3333     468899999999999999999999999999872    


Q ss_pred             -CCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccC
Q 016493          198 -PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       198 -~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~  263 (388)
                       ++.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       163 ~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  228 (281)
T 3ppi_A          163 NGERGALVLTASI-AGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV  228 (281)
T ss_dssp             TSCCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT
T ss_pred             cCCCeEEEEEecc-cccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc
Confidence             257899999998 67888899999999999999999999999999999999999999999987653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=4.2e-37  Score=299.50  Aligned_cols=229  Identities=13%  Similarity=0.089  Sum_probs=187.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHH------------HHHHHHHHHHhhhhhhcCCCCccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVR------------MTVTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~-~G~~Vil~~R~~~~l~------------~~~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      ....+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+++++                
T Consensus        43 ~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~----------------  106 (405)
T 3zu3_A           43 IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ----------------  106 (405)
T ss_dssp             CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH----------------
T ss_pred             cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh----------------
Confidence            345799999999999999999999999 9999999998765432            12223322                


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCC------------CCCCc-------------------
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK------------GFKPL-------------------  164 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~------------~~~~~-------------------  164 (388)
                       .+.++..+.+|++|+++++++++++.+++|++|+||||||...            ...++                   
T Consensus       107 -~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~  185 (405)
T 3zu3_A          107 -KGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKES  185 (405)
T ss_dssp             -TTCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEE
T ss_pred             -cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccc
Confidence             3457888999999999999999999999999999999999841            12444                   


Q ss_pred             --CCCCHHHHHHHHHhhchHHH-HHHHHHHHH-HHcCCCCcEEEEecCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHH
Q 016493          165 --LQFTNEEIEQIVSTNLVGSI-LCTREAMRV-MRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFK  238 (388)
Q Consensus       165 --~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~-m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSK~al~~l~~~la~  238 (388)
                        .+.++++|++++++|..+.+ .+++++++. |.+  ++|+||++||. ++..+.|.+  ..|++||+|+.+|+++|+.
T Consensus       186 ~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~--~gG~IVniSSi-~~~~~~p~~~~~aY~AaKaal~~ltrsLA~  262 (405)
T 3zu3_A          186 VLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLA--EGAQTTAFTYL-GEKITHDIYWNGSIGAAKKDLDQKVLAIRE  262 (405)
T ss_dssp             EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEE--EEEEEEEEECC-CCGGGTTTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhh--CCcEEEEEeCc-hhhCcCCCccchHHHHHHHHHHHHHHHHHH
Confidence              77899999999999999998 788887764 544  36999999998 677778877  9999999999999999999


Q ss_pred             HhCCC-CeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHH
Q 016493          239 ESKRS-KVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR  307 (388)
Q Consensus       239 el~~~-gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~  307 (388)
                      |++++ |||||+|+||+|.|++.......  .        .-......++++.+.+++++..+.||+++.
T Consensus       263 Ela~~~GIRVNaVaPG~i~T~~s~~ip~~--p--------~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd~  322 (405)
T 3zu3_A          263 SLAAHGGGDARVSVLKAVVSQASSAIPMM--P--------LYLSLLFKVMKEKGTHEGCIEQVYSLYKDS  322 (405)
T ss_dssp             HHHTTTSCEEEEEECCCCCCHHHHTSTTH--H--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred             HhCcccCeEEEEEEeCCCcCchhhcCCCC--c--------HHHHHHHHHHhcCCCcHHHHHHHHHHHhcc
Confidence            99999 99999999999999986433210  0        011223447899999999999999999884

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-37  Score=294.78  Aligned_cols=195  Identities=26%  Similarity=0.394  Sum_probs=173.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||+++|++|+++|++|++.+|++++++++.+++++                 .+.++.++.+|
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D  101 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-----------------FGYESSGYAGD  101 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-----------------TTCCEEEEECC
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCceeEEECC
Confidence            4677899999999999999999999999999999999999888877766643                 23578899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.++++|+||||||+.. ..++.+.+.+++++++++|+.+++++++.++|.|+++ +.++||++|
T Consensus       102 l~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~is  179 (285)
T 2c07_A          102 VSKKEEISEVINKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINIS  179 (285)
T ss_dssp             TTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEEC
Confidence            99999999999999999999999999999976 5778899999999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |. ++..+.++...|++||++++.|+++++.|+++.||+||+|+||.++|++...
T Consensus       180 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  233 (285)
T 2c07_A          180 SI-VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK  233 (285)
T ss_dssp             CT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred             Ch-hhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence            97 5666778889999999999999999999999999999999999999998653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.6e-39  Score=314.14  Aligned_cols=264  Identities=14%  Similarity=0.100  Sum_probs=200.8

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++|++|||||++  |||+++|++|+++|++|++++|++...  +...-.+.........   .........+.++++|++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~--l~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~Dv~   75 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN--IFMKNYKNGKFDNDMI---IDKDKKMNILDMLPFDAS   75 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHH--HHHHHHHTTTTTGGGB---CSSSCBCCEEEEEECCTT
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCcccc--ccccchHHHHHHHHHH---Hhhccccccccccccccc
Confidence            479999999986  999999999999999999988875320  1111111000000000   000112245788999999


Q ss_pred             CH--H------------------HHHHHHHHHHhhcCCccEEEEccccCC-CCCCcCCCCHHHHHHHHHhhchHHHHHHH
Q 016493          130 EP--A------------------DVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTR  188 (388)
Q Consensus       130 ~~--~------------------~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  188 (388)
                      +.  +                  +++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.|++++++
T Consensus        76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  155 (329)
T 3lt0_A           76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            88  7                  999999999999999999999999742 35788999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEecCCCCCCCCCCCch-hhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccCccc
Q 016493          189 EAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTI  266 (388)
Q Consensus       189 ~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~-~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~~~~  266 (388)
                      +++|.|+++   |+||++||. ++..+.++.. .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|++.......
T Consensus       156 ~~~p~m~~~---g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~  231 (329)
T 3lt0_A          156 YFVNIMKPQ---SSIISLTYH-ASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKL  231 (329)
T ss_dssp             HHGGGEEEE---EEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--
T ss_pred             HHHHHHhhC---CeEEEEeCc-cccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhh
Confidence            999999864   899999998 6778888885 9999999999999999999998 899999999999999997653210


Q ss_pred             hhh--------------hhhhh---hccC------------------HHHHHHHHhhhhhhccccccceeeccCHHHHHH
Q 016493          267 QNK--------------QMFNI---ICEL------------------PETVARTLVPRIRVVKGSGKAINYLTPPRILLA  311 (388)
Q Consensus       267 ~~~--------------~~~~~---~~~~------------------pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~  311 (388)
                      ...              .....   ....                  .......+++++..|++++..+.||+++...++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~i  311 (329)
T 3lt0_A          232 NNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAI  311 (329)
T ss_dssp             ----------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             cccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccc
Confidence            000              00000   0000                  111223456678899999999999999999899


Q ss_pred             HHHhHhhcCcccc
Q 016493          312 LVTAWLRRGRWFD  324 (388)
Q Consensus       312 ~~~~~~~~g~~~~  324 (388)
                      +|..+..||++..
T Consensus       312 tG~~i~vdGG~~~  324 (329)
T 3lt0_A          312 TGQTIYVDNGLNI  324 (329)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEEcCCeeE
Confidence            9999999998854

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.9e-37  Score=292.03  Aligned_cols=245  Identities=20%  Similarity=0.263  Sum_probs=199.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   91 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-----------------YGVHSKAYKCN   91 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH-----------------HCSCEEEEECC
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcceEEEee
Confidence            3578999999999999999999999999999999999998877766665543                 23568899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcC-CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      ++|.++++++++++.++++++|+||||||+.....++. +.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++
T Consensus        92 l~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~i  170 (279)
T 3ctm_A           92 ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIIT  170 (279)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence            99999999999999999999999999999876225666 78899999999999999999999999999876 47899999


Q ss_pred             cCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          207 DGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       207 sS~~~~~~~--~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ||. ++..+  .++...|++||++++.|+++++.|++++| +||+|+||+++|++.........          ......
T Consensus       171 sS~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~----------~~~~~~  238 (279)
T 3ctm_A          171 SSI-SGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMK----------AKWWQL  238 (279)
T ss_dssp             CCC-TTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHH----------HHHHHH
T ss_pred             Cch-HhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHH----------HHHHHh
Confidence            998 56666  67788999999999999999999999999 99999999999998632111000          001112


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++++..+++++..+.|++++...+.++..+..+|++
T Consensus       239 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          239 TPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             STTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            23455677888888888888877655566666666654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=5.4e-38  Score=290.09  Aligned_cols=194  Identities=30%  Similarity=0.480  Sum_probs=155.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      |++++|+++||||++|||+++|++|+++|++|+++ .|+++++++..+++.+                 .+.++.++++|
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA-----------------AGINVVVAKGD   63 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH-----------------TTCCEEEEESC
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh-----------------cCCcEEEEECC
Confidence            45789999999999999999999999999999998 6787777777666654                 23578899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|+++ +.++||++|
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~s  141 (247)
T 2hq1_A           64 VKNPEDVENMVKTAMDAFGRIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINIT  141 (247)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence            99999999999999999999999999999876 5677788899999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |. ++..+.++...|++||++++.++++++.|+++.||+||+|+||+++|++...
T Consensus       142 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          142 SI-AGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             C----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             Ch-hhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence            97 5667778889999999999999999999999999999999999999997643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=2.3e-37  Score=287.04  Aligned_cols=195  Identities=23%  Similarity=0.420  Sum_probs=175.8

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +.+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++.+
T Consensus         5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~   67 (255)
T 1fmc_A            5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQAFACRC   67 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH-----------------hCCceEEEEc
Confidence            35678999999999999999999999999999999999999888877777654                 2356888999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.++++++|+||||||... ..++ +.+.+++++.+++|+.++++++++++|.|+++ +.++||++
T Consensus        68 D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~  144 (255)
T 1fmc_A           68 DITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTI  144 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999999999999999876 3455 78899999999999999999999999999876 46899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ||. ++..+.++...|++||++++.++++++.|++++||++|+|+||.+.|++...
T Consensus       145 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~  199 (255)
T 1fmc_A          145 TSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS  199 (255)
T ss_dssp             CCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             cch-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh
Confidence            997 5667778889999999999999999999999999999999999999997643

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.4e-37  Score=286.42  Aligned_cols=193  Identities=25%  Similarity=0.375  Sum_probs=173.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..                  ..++.++.+|++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~D~~   64 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------------------PDQIQFFQHDSS   64 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTT
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------------------cCceEEEECCCC
Confidence            56899999999999999999999999999999999998877766554421                  146889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+.++++|+||||||... ..++.+.+.++|++++++|+.+++++++.++|.|++++.+++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  143 (251)
T 1zk4_A           65 DEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI  143 (251)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence            999999999999999999999999999876 5778889999999999999999999999999999987433899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCccccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~  262 (388)
                       ++..+.++...|++||++++.++++++.|+.  +.||+||+|+||++.|++...
T Consensus       144 -~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~  197 (251)
T 1zk4_A          144 -EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD  197 (251)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT
T ss_pred             -hhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh
Confidence             5677788899999999999999999999998  889999999999999998654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=9.6e-38  Score=288.93  Aligned_cols=190  Identities=27%  Similarity=0.386  Sum_probs=171.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                .+.++.++++|++|++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~~   65 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA----------------YADKVLRVRADVADEG   65 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT----------------TGGGEEEEECCTTCHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcEEEEEecCCCHH
Confidence            689999999999999999999999999999999998887766555211                2356889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCC---cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKP---LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +++++++++.++++++|+||||||... ..+   +.+.+.+++++++++|+.+++++++.++|.|+++ +.++||++||.
T Consensus        66 ~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  143 (250)
T 2cfc_A           66 DVNAAIAATMEQFGAIDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASV  143 (250)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCh
Confidence            999999999999999999999999865 344   7888999999999999999999999999999876 46899999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       ++..+.++...|++||++++.|+++++.|++++||+||+|+||++.|++..
T Consensus       144 -~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  194 (250)
T 2cfc_A          144 -ASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ  194 (250)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTH
T ss_pred             -hhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccc
Confidence             567778888999999999999999999999999999999999999999854

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-36  Score=281.92  Aligned_cols=221  Identities=23%  Similarity=0.287  Sum_probs=191.7

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +.+++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++.+
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   87 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-----------------LGAKVHTFVV   87 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh-----------------cCCeEEEEEe
Confidence            45678999999999999999999999999999999999999888877777654                 2357899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.++++++|+||||||+.. ..++.+.+.+++++++++|+.+++++++.++|.|+++ +.++||++
T Consensus        88 Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~i  165 (272)
T 1yb1_A           88 DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTV  165 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             eCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence            999999999999999999999999999999876 5677888899999999999999999999999999987 47999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~---~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      ||. ++..+.++...|++||+++++|+++++.|+.   +.||+||+|+||+|+|++....    ...  .....+|+++|
T Consensus       166 sS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~----~~~--~~~~~~~~dva  238 (272)
T 1yb1_A          166 ASA-AGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----STS--LGPTLEPEEVV  238 (272)
T ss_dssp             CCC-C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----HHH--HCCCCCHHHHH
T ss_pred             ech-hhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc----ccc--ccCCCCHHHHH
Confidence            998 5667777788999999999999999999996   6799999999999999985421    011  11235799999


Q ss_pred             HHHhhhhhhc
Q 016493          284 RTLVPRIRVV  293 (388)
Q Consensus       284 ~~~l~~~~~~  293 (388)
                      +.++..+..+
T Consensus       239 ~~i~~~~~~~  248 (272)
T 1yb1_A          239 NRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHcC
Confidence            9999877644

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-36  Score=274.92  Aligned_cols=214  Identities=27%  Similarity=0.440  Sum_probs=187.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +|+++||||++|||+++|++|+++|+       +|++++|+.++++++.+++.+                 .+.++.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~   64 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-----------------EGALTDTIT   64 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-----------------TTCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc-----------------cCCeeeEEE
Confidence            68999999999999999999999999       999999999888777666643                 245789999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|+++ +.++||+
T Consensus        65 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~  142 (244)
T 2bd0_A           65 ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFF  142 (244)
T ss_dssp             CCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEE
Confidence            9999999999999999999999999999999976 5778889999999999999999999999999999876 4689999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||++.||+........     .....+|+++|+.
T Consensus       143 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~~~dva~~  216 (244)
T 2bd0_A          143 ITSV-AATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----QALMMMPEDIAAP  216 (244)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----GGGSBCHHHHHHH
T ss_pred             Eecc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----cccCCCHHHHHHH
Confidence            9998 677788888999999999999999999999999999999999999999875432111     1133578888888


Q ss_pred             Hhhhhh
Q 016493          286 LVPRIR  291 (388)
Q Consensus       286 ~l~~~~  291 (388)
                      ++..+.
T Consensus       217 ~~~l~~  222 (244)
T 2bd0_A          217 VVQAYL  222 (244)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            876654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.1e-37  Score=323.41  Aligned_cols=231  Identities=24%  Similarity=0.305  Sum_probs=187.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---------HHHHHHHHHHHHHHhhhhhhcCCCCcccccCc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS---------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHA  119 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~---------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  119 (388)
                      ++++||+++||||++|||+++|++|+++|++|++.+|+.         ++++++.+++.+.                 +.
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-----------------g~   66 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-----------------GG   66 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-----------------TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-----------------CC
Confidence            568899999999999999999999999999999998765         5666666666541                 22


Q ss_pred             eEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          120 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       120 ~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      ++   .+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ +
T Consensus        67 ~~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-~  141 (604)
T 2et6_A           67 VA---VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-K  141 (604)
T ss_dssp             EE---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T
T ss_pred             eE---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C
Confidence            32   36888888899999999999999999999999976 5788999999999999999999999999999999987 4


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  279 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  279 (388)
                      .|+|||+||. ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+|| ++|+|......   ....  ...+|
T Consensus       142 ~G~IVnisS~-ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~---~~~~--~~~~p  214 (604)
T 2et6_A          142 YGRIVNTSSP-AGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP---PPML--EKLGP  214 (604)
T ss_dssp             CEEEEEECCH-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC---HHHH--TTCSH
T ss_pred             CCEEEEECCH-HHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC---hhhh--ccCCH
Confidence            7999999997 6677888899999999999999999999999999999999998 68987543211   0000  01244


Q ss_pred             HHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          280 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       280 e~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |++              +..+.||+++. .+.++..+..+|++.
T Consensus       215 e~v--------------A~~v~~L~s~~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          215 EKV--------------APLVLYLSSAE-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             HHH--------------HHHHHHHTSSS-CCCCSCEEEEETTEE
T ss_pred             HHH--------------HHHHHHHhCCc-ccCCCCEEEECCCeE
Confidence            444              44455666666 566677777777653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.3e-37  Score=285.31  Aligned_cols=190  Identities=27%  Similarity=0.484  Sum_probs=172.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ||+++||||++|||+++|++|+++|++|++ .+|++++++++.+++++                 .+.++.++++|++|+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~   63 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-----------------YGGQAITFGGDVSKE   63 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------HTCEEEEEECCTTSH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEeCCCCCH
Confidence            689999999999999999999999999998 48998888877776654                 235788999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++.++++++|+||||||... ..++.+.+.+++++++++|+.++++++++++|.|+++ +.++||++||. +
T Consensus        64 ~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~  140 (244)
T 1edo_A           64 ADVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASV-V  140 (244)
T ss_dssp             HHHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-H
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCh-h
Confidence            9999999999999999999999999976 5778889999999999999999999999999999876 47899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      +..+.++...|++||+++++|+++++.|+.++||+||+|+||+++|++...
T Consensus       141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (244)
T 1edo_A          141 GLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK  191 (244)
T ss_dssp             HHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             hcCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence            566778889999999999999999999999999999999999999998654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.6e-37  Score=286.87  Aligned_cols=195  Identities=29%  Similarity=0.429  Sum_probs=175.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                .+.++.++.+|+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~   66 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK----------------YGVKAHGVEMNL   66 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----------------HCCCEEEEECCT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh----------------cCCceEEEEccC
Confidence            4678999999999999999999999999999999999998888777766542                134688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  144 (248)
T 2pnf_A           67 LSEESINKAFEEIYNLVDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISS  144 (248)
T ss_dssp             TCHHHHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            9999999999999999999999999999876 5677889999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      . ++..+.++...|++||++++.++++++.|+++.||+||+|+||+++|++...
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  197 (248)
T 2pnf_A          145 V-VGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV  197 (248)
T ss_dssp             H-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             H-HhcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence            7 4556677889999999999999999999999999999999999999998653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=6.9e-36  Score=278.79  Aligned_cols=193  Identities=24%  Similarity=0.293  Sum_probs=169.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D   66 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--------------------GNNCVFAPAD   66 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--------------------CTTEEEEECC
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--------------------CCceEEEEcC
Confidence            46789999999999999999999999999999999999988877665543                    2468889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcC------CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC---
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL------QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---  198 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~------~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---  198 (388)
                      ++|+++++++++++.++++++|+||||||... ..++.      +.+.++|++.+++|+.++++++++++|.|+++.   
T Consensus        67 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~  145 (265)
T 2o23_A           67 VTSEKDVQTALALAKGKFGRVDVAVNCAGIAV-ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQ  145 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEECCccCC-CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999865 33333      378999999999999999999999999998762   


Q ss_pred             --CCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          199 --KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       199 --~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                        +.++||++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++...
T Consensus       146 ~~~~~~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          146 GGQRGVIINTASV-AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             TSCCEEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred             CCCCcEEEEeCCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence              36899999987 5667778889999999999999999999999999999999999999998654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=4.9e-38  Score=292.59  Aligned_cols=234  Identities=16%  Similarity=0.200  Sum_probs=188.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+ +.+.                 +.++..+     |.++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~-----------------~~~~~~~-----d~~~   58 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-----------------YPQLKPM-----SEQE   58 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-----------------CTTSEEC-----CCCS
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc-----------------CCcEEEE-----CHHH
Confidence            789999999999999999999999999999999988776654 5431                 1233332     6778


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.++++++|+||||||+.....++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||. ++.
T Consensus        59 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~  136 (254)
T 1zmt_A           59 PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSA-TPF  136 (254)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCS-TTT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCc-ccc
Confidence            8899999999999999999999987225788899999999999999999999999999999876 46899999998 677


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc---------cccccccCccchhhhhhhhhccCHHHHHH
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV---------LTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v---------~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      .+.++...|++||+++++|+++++.|++++||+||+|+||+|         +|++.....     ...      ......
T Consensus       137 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~-----~~~------~~~~~~  205 (254)
T 1zmt_A          137 GPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNP-----EHV------AHVKKV  205 (254)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCH-----HHH------HHHHHH
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccCh-----HHH------HHHhcc
Confidence            788889999999999999999999999999999999999999         776643210     000      001112


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .++.++..|++++..+.|++++...+.++..+..||++.
T Consensus       206 ~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          206 TALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             SSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence            234455667777777777877766666777777777764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5.6e-37  Score=288.21  Aligned_cols=197  Identities=25%  Similarity=0.387  Sum_probs=173.0

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ...+++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.                  ...++.++.
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~   70 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG------------------SPDVISFVH   70 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------------------CTTTEEEEE
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC------------------CCCceEEEE
Confidence            34467899999999999999999999999999999999999887765554431                  113688999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +|++|+++++++++++.++++++|+||||||.... ..++.+.+.++|++++++|+.++++++++++|.|+++ +.++||
T Consensus        71 ~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv  149 (278)
T 2bgk_A           71 CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIV  149 (278)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCeEE
Confidence            99999999999999999999999999999998642 2567889999999999999999999999999999876 478999


Q ss_pred             EecCCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          205 NMDGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       205 ~isS~~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ++||. ++..+.+ +...|++||+++++++++++.|++++||+|++|+||.+.|++...
T Consensus       150 ~isS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (278)
T 2bgk_A          150 FTASI-SSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD  207 (278)
T ss_dssp             EECCG-GGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred             EEeec-cccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhh
Confidence            99998 5566666 788999999999999999999999999999999999999998654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.6e-37  Score=298.74  Aligned_cols=233  Identities=24%  Similarity=0.296  Sum_probs=187.4

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE---------eCChHHHHHHHHHHHHHHhhhhhhcCCCCccccc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA---------SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV  117 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~---------~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~  117 (388)
                      ..++++||++|||||++|||+++|++|+++|++|++.         +|+.+++++..+++.+.                 
T Consensus         3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-----------------   65 (319)
T 1gz6_A            3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----------------   65 (319)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----------------
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-----------------
Confidence            3467899999999999999999999999999999996         45778888777777542                 


Q ss_pred             CceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 016493          118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  197 (388)
Q Consensus       118 ~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  197 (388)
                      +..   ..+|++|.++++++++++.++++++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++
T Consensus        66 ~~~---~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  141 (319)
T 1gz6_A           66 GGK---AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ  141 (319)
T ss_dssp             TCE---EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCe---EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence            222   258999999999999999999999999999999976 5678889999999999999999999999999999887


Q ss_pred             CCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc
Q 016493          198 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  277 (388)
Q Consensus       198 ~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  277 (388)
                       +.++||++||. ++..+.++...|++||+|+++|+++|++|++++||+||+|+||.+ |++......   ...      
T Consensus       142 -~~grIV~vsS~-~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~---~~~------  209 (319)
T 1gz6_A          142 -NYGRIIMTASA-SGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP---EDL------  209 (319)
T ss_dssp             -TCEEEEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC---HHH------
T ss_pred             -CCCEEEEECCh-hhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC---hhh------
Confidence             46999999997 455667788999999999999999999999999999999999998 876432110   000      


Q ss_pred             CHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          278 LPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                                .+...|++++..+.|++++.. +.++..+..+|+|.
T Consensus       210 ----------~~~~~p~dvA~~~~~l~s~~~-~~tG~~~~v~GG~~  244 (319)
T 1gz6_A          210 ----------VEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWI  244 (319)
T ss_dssp             ----------HHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEE
T ss_pred             ----------hccCCHHHHHHHHHHHhCchh-hcCCCEEEECCCeE
Confidence                      012345555555666665532 33455555666654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=7.7e-37  Score=290.98  Aligned_cols=194  Identities=24%  Similarity=0.316  Sum_probs=175.7

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..                +.++.++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----------------~~~~~~~~~   83 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT----------------GNKVHAIQC   83 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----------------SSCEEEEEC
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc----------------CCceEEEEe
Confidence            3457899999999999999999999999999999999999998888877776531                356889999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++++++.+.++++|+||||||+.. ..++.+.+.+++++.+++|+.++++++++++|.|+++.+.++||++
T Consensus        84 Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~i  162 (302)
T 1w6u_A           84 DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSI  162 (302)
T ss_dssp             CTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            999999999999999999999999999999876 5778889999999999999999999999999999854457899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ||. ++..+.++...|++||++++.++++++.|++++||+||+|+||++.|+
T Consensus       163 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  213 (302)
T 1w6u_A          163 TTI-YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK  213 (302)
T ss_dssp             CCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             ccc-ccccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCc
Confidence            997 566777888999999999999999999999999999999999999998

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=289.69  Aligned_cols=201  Identities=19%  Similarity=0.292  Sum_probs=171.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+....          ......++.++++|++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~D~~   73 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSK----------EGPPRGNHAAFQADVS   73 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC----------------------CCEEEECCTT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCcc----------ccccCcceEEEEecCC
Confidence            568999999999999999999999999999999999998887766555331100          0001146888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCc-cEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSI-DIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~i-D~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      |.++++++++.+.+++|++ |+||||||... ..++.+.+.+++++++++|+.++++++++++|.|++++..++||++||
T Consensus        74 ~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  152 (264)
T 2pd6_A           74 EARAARCLLEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISS  152 (264)
T ss_dssp             SHHHHHHHHHHHHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECC
Confidence            9999999999999999999 99999999876 577888999999999999999999999999999987633689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      . ++..+.++...|++||++++.|+++++.|++++||+||+|+||.+.|++...
T Consensus       153 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          153 I-VGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             T-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred             h-hhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence            7 5667778889999999999999999999999999999999999999998643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.4e-37  Score=322.77  Aligned_cols=231  Identities=24%  Similarity=0.337  Sum_probs=191.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+++||||++|||+++|++|+++|++|++.+|+.  ++++.+++.+                 .+.++..+.+|+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~-----------------~g~~~~~~~~Dv  378 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKA-----------------AGGEAWPDQHDV  378 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHH-----------------TTCEEEEECCCH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHh-----------------cCCeEEEEEcCh
Confidence            468899999999999999999999999999999998742  3445555544                 235677788888


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +  ++.+++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ +.|+|||+||
T Consensus       379 ~--~~~~~~~~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS  454 (604)
T 2et6_A          379 A--KDSEAIIKNVIDKYGTIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITS  454 (604)
T ss_dssp             H--HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             H--HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECC
Confidence            4  5567888999999999999999999976 5788999999999999999999999999999999987 4799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||. +|+|......              ++     ..
T Consensus       455 ~-ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~--------------~~-----~~  513 (604)
T 2et6_A          455 T-SGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMR--------------EQ-----DK  513 (604)
T ss_dssp             H-HHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------C
T ss_pred             h-hhccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCc--------------hh-----hc
Confidence            7 66778888999999999999999999999999999999999995 9998542110              00     01


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ....|++++..+.||+++... .+|..+..||+|..
T Consensus       514 ~~~~pe~vA~~v~~L~s~~~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          514 NLYHADQVAPLLVYLGTDDVP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             CSSCGGGTHHHHHHTTSTTCC-CCSCEEEEETTEEE
T ss_pred             cCCCHHHHHHHHHHHhCCccC-CCCcEEEECCCeeE
Confidence            123677888888899998877 88888888888753

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.2e-35  Score=270.71  Aligned_cols=212  Identities=28%  Similarity=0.380  Sum_probs=175.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ..+|+++||||++|||+++|++|+++|++|++++|+.++++++.+++                     .++.++.+|++|
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~   61 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---------------------EGALPLPGDVRE   61 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------------------hhceEEEecCCC
Confidence            35789999999999999999999999999999999988776554332                     147789999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||. 
T Consensus        62 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~-  138 (234)
T 2ehd_A           62 EGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSL-  138 (234)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCT-
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCc-
Confidence            99999999999999999999999999876 5778889999999999999999999999999999987 47999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhh
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  290 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~  290 (388)
                      ++..+.++...|++||+++++++++++.|++++||+||+|+||+++|++......    .+ .  ..+|+++|+.++..+
T Consensus       139 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~-~--~~~~~dvA~~~~~l~  211 (234)
T 2ehd_A          139 AGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPG----QA-W--KLKPEDVAQAVLFAL  211 (234)
T ss_dssp             TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------CCHHHHHHHHHHHH
T ss_pred             hhcCCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccccc----cc-C--CCCHHHHHHHHHHHh
Confidence            6677788889999999999999999999999999999999999999998653211    11 1  358999999888766


Q ss_pred             hhc
Q 016493          291 RVV  293 (388)
Q Consensus       291 ~~~  293 (388)
                      ..+
T Consensus       212 ~~~  214 (234)
T 2ehd_A          212 EMP  214 (234)
T ss_dssp             HSC
T ss_pred             CCC
Confidence            543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=290.16  Aligned_cols=253  Identities=23%  Similarity=0.358  Sum_probs=198.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ...++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+....            ..+.++.++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~------------~~~~~~~~~~~   79 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP------------TKQARVIPIQC   79 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT------------TCCCCEEEEEC
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc------------cCCccEEEEec
Confidence            344688999999999999999999999999999999999999888887777552110            02357899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||... ..++.+.+.+++++++++|+.++++++++++|.|.++ +.++||++
T Consensus        80 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~i  157 (303)
T 1yxm_A           80 NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNI  157 (303)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-cCCeEEEE
Confidence            999999999999999999999999999999865 5778889999999999999999999999999976554 36899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-hhhhhhhhhccCHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICELPETVART  285 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~pe~vA~~  285 (388)
                      ||. + ..+.+....|+++|+++.+++++++.|+.++||+||+|+||.|.|++....... .........       ...
T Consensus       158 sS~-~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-------~~~  228 (303)
T 1yxm_A          158 IVP-T-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF-------QKI  228 (303)
T ss_dssp             CCC-C-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG-------GGS
T ss_pred             Eee-c-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHH-------hcC
Confidence            987 4 677788899999999999999999999999999999999999999953221110 000000000       011


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++.++..+++++..+.|++++...+.++..+..+|++
T Consensus       229 p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~  265 (303)
T 1yxm_A          229 PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR  265 (303)
T ss_dssp             TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCe
Confidence            2234445555666666666665545555666666665

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=6.1e-37  Score=284.43  Aligned_cols=244  Identities=21%  Similarity=0.290  Sum_probs=197.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+ +++++++.+++.+                 .+.++.++.+|+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   66 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA-----------------DGGDAAFFAADL   66 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh-----------------cCCceEEEECCC
Confidence            4678999999999999999999999999999999999 8888777776654                 235789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEcccc-CCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC----CCcEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHI  203 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~----~~g~I  203 (388)
                      +|+++++++++++.++++++|+||||||. .. ..++.+.+.+++++++++|+.++++++++++|.|++++    ..++|
T Consensus        67 ~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (258)
T 3afn_B           67 ATSEACQQLVDEFVAKFGGIDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAV  145 (258)
T ss_dssp             TSHHHHHHHHHHHHHHHSSCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEE
Confidence            99999999999999999999999999998 44 57788899999999999999999999999999997642    12899


Q ss_pred             EEecCCCCCCC-CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          204 FNMDGAGSGGS-STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       204 v~isS~~~~~~-~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      |++||. .+.. +.++...|++||++++.++++++.|++++||+||+|+||.+.|++............          .
T Consensus       146 v~~sS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~----------~  214 (258)
T 3afn_B          146 ISTGSI-AGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRI----------S  214 (258)
T ss_dssp             EEECCT-HHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHH----------H
T ss_pred             EEecch-hhccCCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHH----------h
Confidence            999987 4444 677889999999999999999999999999999999999999998643211000000          0


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHH-HHHHHhHhhcCcc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRIL-LALVTAWLRRGRW  322 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~g~~  322 (388)
                      ...++.++..+++++..+.+++++... +.++..+..+|++
T Consensus       215 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          215 NGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             TTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             ccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            011234556777888877788777654 4455555555544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=4.7e-36  Score=274.84  Aligned_cols=207  Identities=21%  Similarity=0.263  Sum_probs=168.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++.+|++|.++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~~   61 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--------------------SNNVGYRARDLASHQE   61 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--------------------SSCCCEEECCTTCHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--------------------hhccCeEeecCCCHHH
Confidence            78999999999999999999999999999999998877655443                    3567889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.+.   .|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++++  ++||++||. ++.
T Consensus        62 v~~~~~~~~~~---~d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~-~~~  134 (230)
T 3guy_A           62 VEQLFEQLDSI---PSTVVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMST-AAQ  134 (230)
T ss_dssp             HHHHHHSCSSC---CSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCG-GGT
T ss_pred             HHHHHHHHhhc---CCEEEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeec-ccC
Confidence            99998877543   499999999977 68889999999999999999999999999999998763  499999998 677


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........    .....+|+++|+.++..+.
T Consensus       135 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~dvA~~i~~l~~  208 (230)
T 3guy_A          135 QPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLD----TSSFMSAEDAALMIHGALA  208 (230)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------CCCHHHHHHHHHHHCC
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCCC----cccCCCHHHHHHHHHHHHh
Confidence            8889999999999999999999999999999999999999999998754322111    1122468888887765554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-35  Score=275.48  Aligned_cols=226  Identities=24%  Similarity=0.393  Sum_probs=185.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++..               ...++.++.+|+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl   92 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG---------------YPGTLIPYRCDL   92 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---------------CSSEEEEEECCT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC---------------CCceEEEEEecC
Confidence            35789999999999999999999999999999999999998888777765421               125688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~is  207 (388)
                      +|+++++++++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++.++|.|++++. .++||++|
T Consensus        93 ~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~is  171 (279)
T 1xg5_A           93 SNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININ  171 (279)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEc
Confidence            9999999999999999999999999999876 577888999999999999999999999999999998742 48999999


Q ss_pred             CCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccccCccchhhh----hhhhhccCH
Q 016493          208 GAGSGG--SSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQ----MFNIICELP  279 (388)
Q Consensus       208 S~~~~~--~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~p  279 (388)
                      |. ++.  .+.++...|++||++++.|+++++.|++  +.||+||+|+||+|+|++...........    .......+|
T Consensus       172 S~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (279)
T 1xg5_A          172 SM-SGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKP  250 (279)
T ss_dssp             CG-GGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCH
T ss_pred             Ch-hhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCH
Confidence            97 444  4667788999999999999999999998  88999999999999999843211100000    001112357


Q ss_pred             HHHHHHHhhhhh
Q 016493          280 ETVARTLVPRIR  291 (388)
Q Consensus       280 e~vA~~~l~~~~  291 (388)
                      +++|+.++..+.
T Consensus       251 ~dvA~~i~~l~~  262 (279)
T 1xg5_A          251 EDVAEAVIYVLS  262 (279)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            777776665554

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=8.9e-37  Score=281.59  Aligned_cols=186  Identities=24%  Similarity=0.357  Sum_probs=164.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++                     ..+.++++|+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~   61 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------------------PGIEPVCVDL   61 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---------------------CCCCEEEEeC
Confidence            5688999999999999999999999999999999999988776554332                     1245679999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++    .++++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|++++..++||++||
T Consensus        62 ~~~~~~~~~~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  136 (244)
T 3d3w_A           62 GDWEATERALG----SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS  136 (244)
T ss_dssp             TCHHHHHHHHT----TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHHH----HcCCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCc
Confidence            99999988776    5689999999999876 577888999999999999999999999999999987633689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . ++..+.++...|++||++++.++++++.|++++||+||+|+||+|.|++..
T Consensus       137 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~  188 (244)
T 3d3w_A          137 Q-CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ  188 (244)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHH
T ss_pred             h-hhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchh
Confidence            8 667778888999999999999999999999999999999999999999864

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.6e-36  Score=279.64  Aligned_cols=190  Identities=25%  Similarity=0.402  Sum_probs=170.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE-EEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG-IACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~Dls~  130 (388)
                      +|+++||||++|||+++|++|+++|++|+++ +|+.++++++.+++.+                 .+.++.. +.+|++|
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~~D~~~   63 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR-----------------RGSPLVAVLGANLLE   63 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCSCEEEEECCTTS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEEeccCCC
Confidence            5899999999999999999999999999998 8998888877766654                 2245566 8999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++++++.++|.|+++ +.++||++||. 
T Consensus        64 ~~~~~~~~~~~~~~~~~~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~-  140 (245)
T 2ph3_A           64 AEAATALVHQAAEVLGGLDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSV-  140 (245)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeCh-
Confidence            99999999999999999999999999876 5778889999999999999999999999999999876 46899999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ++..+.++...|++||++++.++++++.|+.++||+||+|+||++.|++...
T Consensus       141 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  192 (245)
T 2ph3_A          141 VGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER  192 (245)
T ss_dssp             HHHHCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence            5566778889999999999999999999999999999999999999998653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=6.5e-37  Score=307.68  Aligned_cols=242  Identities=18%  Similarity=0.230  Sum_probs=195.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+... +++.+...+                   ..+.++.||+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~-------------------~~~~~~~~Dv  268 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK-------------------VGGTALTLDV  268 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH-------------------HTCEEEECCT
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH-------------------cCCeEEEEec
Confidence            34689999999999999999999999999999999997532 222221111                   1346799999


Q ss_pred             CCHHHHHHHHHHHHhhcCC-ccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~-iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +|.++++++++++.+++++ +|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.++||++|
T Consensus       269 td~~~v~~~~~~~~~~~g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-~~g~iV~iS  346 (454)
T 3u0b_A          269 TADDAVDKITAHVTEHHGGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGLS  346 (454)
T ss_dssp             TSTTHHHHHHHHHHHHSTTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-TTCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHcCCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEe
Confidence            9999999999999999986 999999999987 6888999999999999999999999999999999877 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++.............          ....+
T Consensus       347 S~-a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~----------~~~~l  415 (454)
T 3u0b_A          347 SM-AGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGR----------RLNSL  415 (454)
T ss_dssp             CH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHH----------HSBTT
T ss_pred             Ch-HhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHH----------hhccc
Confidence            98 67788899999999999999999999999999999999999999999987543211110000          01123


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+...|++++..+.||+++...+++|..+..||++.
T Consensus       416 ~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          416 FQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             SSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred             cCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCccc
Confidence            455677788888889999988888888888887763

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.8e-36  Score=280.31  Aligned_cols=216  Identities=19%  Similarity=0.249  Sum_probs=151.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||++|||||++|||+++|++|++ |++|++++|+++++++..+                      ..++.++.+|+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------------------~~~~~~~~~D~   57 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------------------IEGVEPIESDI   57 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------------------STTEEEEECCH
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------------------hcCCcceeccc
Confidence            467899999999999999999999987 9999999999887765432                      13478899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++.++ .+.+.+..++++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++  +|+||++||
T Consensus        58 ~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS  133 (245)
T 3e9n_A           58 VKEVL-EEGGVDKLKNLDHVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINS  133 (245)
T ss_dssp             HHHHH-TSSSCGGGTTCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC-
T ss_pred             chHHH-HHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcC
Confidence            99877 4455555677899999999999977 5778888999999999999999999999999999876  389999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..................+|+++|+.++.
T Consensus       134 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~  212 (245)
T 3e9n_A          134 G-AGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRF  212 (245)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHH
T ss_pred             c-ccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHH
Confidence            8 678888899999999999999999999999999999999999999999876543322222222223478888887776


Q ss_pred             hhhh
Q 016493          289 RIRV  292 (388)
Q Consensus       289 ~~~~  292 (388)
                      .+..
T Consensus       213 l~~~  216 (245)
T 3e9n_A          213 VIDA  216 (245)
T ss_dssp             HHTS
T ss_pred             HHcC
Confidence            5543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=8.8e-35  Score=275.13  Aligned_cols=220  Identities=20%  Similarity=0.283  Sum_probs=188.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.                ...++.++.+|+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   87 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL----------------GAASAHYIAGTM   87 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------TCSEEEEEECCT
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----------------CCCceEEEeCCC
Confidence            4578999999999999999999999999999999999999988877776542                124688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEc-cccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINN-AGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~n-AG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +|.++++++++++.+++|++|+|||| ||...  .++.+.+.+++++++++|+.|+++++++++|.|+++  .|+||++|
T Consensus        88 ~d~~~v~~~~~~~~~~~g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~is  163 (286)
T 1xu9_A           88 EDMTFAEQFVAQAGKLMGGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVS  163 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHTSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEEC
Confidence            99999999999999999999999999 57653  355667899999999999999999999999999865  48999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el--~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      |. ++..+.++...|++||+++++|+++++.|+  .+.||+|++|+||+|+|++.......    .......+|+++|+.
T Consensus       164 S~-~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~vA~~  238 (286)
T 1xu9_A          164 SL-AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----IVHMQAAPKEECALE  238 (286)
T ss_dssp             EG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----GGGGGCBCHHHHHHH
T ss_pred             Cc-ccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc----cccCCCCCHHHHHHH
Confidence            98 677788889999999999999999999999  67899999999999999986432111    011234589999999


Q ss_pred             Hhhhhhhc
Q 016493          286 LVPRIRVV  293 (388)
Q Consensus       286 ~l~~~~~~  293 (388)
                      ++..+...
T Consensus       239 i~~~~~~~  246 (286)
T 1xu9_A          239 IIKGGALR  246 (286)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhcC
Confidence            99877643

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=5.5e-37  Score=279.89  Aligned_cols=168  Identities=22%  Similarity=0.287  Sum_probs=151.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+                                     +|+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------------------~D~   44 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------------------LDI   44 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------------------CCT
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------------------cCC
Confidence            4678999999999999999999999999999999998631                                     799


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++    +++|+||||||+..+..++.+.+.++|++++++|+.++++++++++|.|++   +|+||++||
T Consensus        45 ~~~~~v~~~~~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS  117 (223)
T 3uce_A           45 SDEKSVYHYFETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSG  117 (223)
T ss_dssp             TCHHHHHHHHHHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECC
T ss_pred             CCHHHHHHHHHHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecc
Confidence            9999999988754    899999999998744688899999999999999999999999999999975   489999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccC
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~  263 (388)
                      . ++..+.++...|++||+|+++|+++++.|+++  |+||+|+||+++||+....
T Consensus       118 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~  169 (223)
T 3uce_A          118 M-LSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGM  169 (223)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTS
T ss_pred             h-hhccCCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhc
Confidence            8 67888899999999999999999999999987  9999999999999987654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.9e-37  Score=296.78  Aligned_cols=255  Identities=16%  Similarity=0.177  Sum_probs=164.8

Q ss_pred             cCCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHH-----------HHHHHHHHHhhh
Q 016493           49 CKAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSS-----------ESVRM-----------TVTELEENLKEG  104 (388)
Q Consensus        49 ~~~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~-----------~~l~~-----------~~~~l~~~~~~~  104 (388)
                      ++++||++|||||  ++|||+++|++|+++|++|++++|++           +++++           +.+++.+.    
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   80 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEK----   80 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhc----
Confidence            4678999999999  89999999999999999999998753           22221           11111110    


Q ss_pred             hhhcCCCCcccccCceEEEEEc------------cCCC--------HHHHHHHHHHHHhhcCCccEEEEccccCC-CCCC
Q 016493          105 MMAAGGSSKKNLVHAKVAGIAC------------DVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKP  163 (388)
Q Consensus       105 ~~~~~~~~~~~~~~~~i~~~~~------------Dls~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~  163 (388)
                          +.      ......++.+            |++|        +++++++++++.+++|++|+||||||+.. ...+
T Consensus        81 ----~~------~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~  150 (319)
T 2ptg_A           81 ----PV------DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKP  150 (319)
T ss_dssp             --------------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSC
T ss_pred             ----cc------cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCc
Confidence                00      0000123333            3343        45899999999999999999999999753 2467


Q ss_pred             cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC
Q 016493          164 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR  242 (388)
Q Consensus       164 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSK~al~~l~~~la~el~~  242 (388)
                      +.+.+.++|++++++|+.++++++++++|+|++   +|+||++||. ++..+.++. ..|++||+|+++|+++|+.|+++
T Consensus       151 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~  226 (319)
T 2ptg_A          151 LLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE---GGSALALSYI-ASEKVIPGYGGGMSSAKAALESDCRTLAFEAGR  226 (319)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEEC-C------------------THHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc---CceEEEEecc-ccccccCccchhhHHHHHHHHHHHHHHHHHhcc
Confidence            889999999999999999999999999999975   3899999998 566777777 68999999999999999999985


Q ss_pred             -CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          243 -SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       243 -~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                       +||+||+|+||+|+|++................  ........+++++..|++++..+.||+++...+.+|..+..||+
T Consensus       227 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          227 ARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLA--IDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             HHCCEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccCeeEEEEeeCCccChhhhhcccccchhhHHHH--HHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence             899999999999999986432110000000000  00011234567778899999999999999888888888888888


Q ss_pred             cc
Q 016493          322 WF  323 (388)
Q Consensus       322 ~~  323 (388)
                      +.
T Consensus       305 ~~  306 (319)
T 2ptg_A          305 LH  306 (319)
T ss_dssp             CT
T ss_pred             ce
Confidence            74

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-36  Score=282.08  Aligned_cols=193  Identities=25%  Similarity=0.405  Sum_probs=173.7

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ..+++++|+++||||++|||+++|++|+++|++|++++| +.+++++..+++++                 .+.++.+++
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~   77 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-----------------LGAQGVAIQ   77 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-----------------cCCcEEEEE
Confidence            456789999999999999999999999999999999999 77777777666654                 245688999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.++++++++++|.|+ +  +++||+
T Consensus        78 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~--~~~iv~  153 (274)
T 1ja9_A           78 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R--GGRIIL  153 (274)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E--EEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--CCEEEE
Confidence            9999999999999999999999999999999876 57788899999999999999999999999999998 3  389999


Q ss_pred             ecCCCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          206 MDGAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       206 isS~~~~~-~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      +||. ++. .+.++...|++||++++.++++++.|++++||++++|+||.+.|++..
T Consensus       154 ~sS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          154 TSSI-AAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             ECCG-GGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             EcCh-HhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence            9997 454 677888999999999999999999999999999999999999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-36  Score=279.09  Aligned_cols=232  Identities=19%  Similarity=0.237  Sum_probs=178.4

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      .+...++||+++||||++|||+++|++|+++|++|++++|+++.++    +                    . .++.++ 
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~--------------------~-~~~~~~-   65 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----R--------------------S-GHRYVV-   65 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----H--------------------T-CSEEEE-
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----h--------------------h-CCeEEE-
Confidence            3456789999999999999999999999999999999999973321    1                    1 145667 


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|+  .++++++++++    .++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|+++ +.++||+
T Consensus        66 ~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  137 (249)
T 1o5i_A           66 CDL--RKDLDLLFEKV----KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVA  137 (249)
T ss_dssp             CCT--TTCHHHHHHHS----CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             eeH--HHHHHHHHHHh----cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            999  55677766655    38999999999876 5778899999999999999999999999999999887 4689999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh-hhhhhhccCHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-QMFNIICELPETVAR  284 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~pe~vA~  284 (388)
                      +||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++.......... .+.          ..
T Consensus       138 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~----------~~  206 (249)
T 1o5i_A          138 ITSF-SVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVE----------SQ  206 (249)
T ss_dssp             ECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHH----------TT
T ss_pred             Ecch-HhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHH----------hc
Confidence            9998 67778888999999999999999999999999999999999999999986421110000 000          01


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .++.++..|++++..+.|++++...+.++..+..+|++
T Consensus       207 ~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          207 IPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            12234445566666666666665545555556666554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2.2e-35  Score=284.95  Aligned_cols=195  Identities=19%  Similarity=0.236  Sum_probs=163.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||++|||+++|++|+++|++|++++|+..++++..+.+.+....           ...+.++.++.+|++|.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~Dv~d~   69 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-----------ACPPGSLETLQLDVRDS   69 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT-----------TCCTTSEEEEECCTTCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc-----------cCCCCceEEEEecCCCH
Confidence            4789999999999999999999999999998887765554443333221100           00235688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++  .++++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++||. +
T Consensus        70 ~~v~~~~~~~--~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS~-~  144 (327)
T 1jtv_A           70 KSVAAARERV--TEGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSV-G  144 (327)
T ss_dssp             HHHHHHHHTC--TTSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEG-G
T ss_pred             HHHHHHHHHH--hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCc-c
Confidence            9999999987  3589999999999876 5788899999999999999999999999999999876 47999999998 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      +..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++...
T Consensus       145 ~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh
Confidence            777788899999999999999999999999999999999999999998754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=5e-35  Score=271.87  Aligned_cols=187  Identities=23%  Similarity=0.342  Sum_probs=161.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      |++++|+++||||++|||+++|++|+++|++ |++++|+.++  +..+++.+..               .+.++.++.+|
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~---------------~~~~~~~~~~D   63 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAIN---------------PKVNITFHTYD   63 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHC---------------TTSEEEEEECC
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhC---------------CCceEEEEEEe
Confidence            4678999999999999999999999999996 9999998742  2233343321               13578899999


Q ss_pred             CCCH-HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEE
Q 016493          128 VCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIF  204 (388)
Q Consensus       128 ls~~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv  204 (388)
                      ++|+ ++++++++++.++++++|+||||||+.         +.+++++++++|+.++++++++++|.|++++  ..|+||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv  134 (254)
T 1sby_A           64 VTVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIA  134 (254)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEE
T ss_pred             cCCChHHHHHHHHHHHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEE
Confidence            9998 999999999999999999999999973         3467899999999999999999999997652  258999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      ++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...
T Consensus       135 ~isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          135 NICSV-TGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             EECCG-GGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             EECch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence            99998 6777888899999999999999999999998889999999999999998654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-36  Score=274.82  Aligned_cols=186  Identities=23%  Similarity=0.349  Sum_probs=164.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                     ..+.++.+|+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~   61 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---------------------PGIEPVCVDL   61 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------------------cCCCcEEecC
Confidence            4678999999999999999999999999999999999988766543321                     1245679999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++    .++++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|++++..++||++||
T Consensus        62 ~~~~~~~~~~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS  136 (244)
T 1cyd_A           62 GDWDATEKALG----GIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS  136 (244)
T ss_dssp             TCHHHHHHHHT----TCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHHH----HcCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Confidence            99999988776    5689999999999876 577888999999999999999999999999999987633689999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      . .+..+.++...|++||++++.++++++.|++++||+|++|+||.+.|++..
T Consensus       137 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          137 M-VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred             h-hhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence            8 667778888999999999999999999999999999999999999999754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=7.7e-37  Score=293.42  Aligned_cols=264  Identities=14%  Similarity=0.131  Sum_probs=190.2

Q ss_pred             cCCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE--
Q 016493           49 CKAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI--  124 (388)
Q Consensus        49 ~~~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~--  124 (388)
                      ++++||++|||||  ++|||+++|++|+++|++|++++|++.. ....+...+...+... ......   ....+..+  
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~   79 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVL-GLFQKSLQSGRLDEDR-KLPDGS---LIEFAGVYPL   79 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHH-HHHHHHHHHTTTHHHH-BCTTSC---BCCCSCEEEC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccccc-chhhhhhhhhhhhhhh-hhhccc---cccccccccc
Confidence            4678999999999  8999999999999999999999987521 0000000000000000 000000   00001223  


Q ss_pred             ----------EccCCC--------HHHHHHHHHHHHhhcCCccEEEEccccCC-CCCCcCCCCHHHHHHHHHhhchHHHH
Q 016493          125 ----------ACDVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSIL  185 (388)
Q Consensus       125 ----------~~Dls~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~  185 (388)
                                .+|++|        +++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.++++
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence                      334443        66899999999999999999999999753 24678899999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccC
Q 016493          186 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       186 l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~  263 (388)
                      ++++++|.|++   +|+||++||. ++..+.++. ..|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|++....
T Consensus       160 l~~~~~~~m~~---~g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~  235 (315)
T 2o2s_A          160 LLQHFGPIMNE---GGSAVTLSYL-AAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAI  235 (315)
T ss_dssp             HHHHHSTTEEE---EEEEEEEEEG-GGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHT
T ss_pred             HHHHHHHHHhc---CCEEEEEecc-cccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhc
Confidence            99999999975   3899999998 566777776 58999999999999999999985 899999999999999986432


Q ss_pred             ccchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          264 STIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       264 ~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ............  ........+++++..|++++..+.||+++...+.+|..+..||++.
T Consensus       236 ~~~~~~~~~~~~--~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          236 GKSGEKSFIDYA--IDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             TCSSSSCHHHHH--HHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cccccchhHHHH--HHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            110000000000  0001122355667788888988899999988888888888888874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-34  Score=270.24  Aligned_cols=187  Identities=29%  Similarity=0.428  Sum_probs=164.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D~~   68 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF---------------EPQKTLFIQCDVA   68 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS---------------CGGGEEEEECCTT
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc---------------CCCceEEEecCCC
Confidence            4689999999999999999999999999999999999988777666653311               1346889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~is  207 (388)
                      |+++++++++++.+++|++|+||||||...         .++|++.+++|+.+++.+++.++|.|++++  +.++||++|
T Consensus        69 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is  139 (267)
T 2gdz_A           69 DQQQLRDTFRKVVDHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS  139 (267)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence            999999999999999999999999999742         356899999999999999999999998752  268999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHH--HHHhCCCCeEEEEEecCcccccccc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASL--FKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~l--a~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      |. ++..+.++...|++||+++++|++++  +.|+++.||+||+|+||+|+|++..
T Consensus       140 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~  194 (267)
T 2gdz_A          140 SL-AGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE  194 (267)
T ss_dssp             CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH
T ss_pred             Cc-cccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhh
Confidence            98 67777888899999999999999995  6899999999999999999999864

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5e-35  Score=269.07  Aligned_cols=203  Identities=15%  Similarity=0.113  Sum_probs=173.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||++|||+++|++|+++|++|++++|++++++                           ....++.+|++|+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~D~~~~   54 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------------------DSNILVDGNKNWT   54 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------------------SEEEECCTTSCHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------------------cccEEEeCCCCCH
Confidence            5799999999999999999999999999999999876421                           2356789999999


Q ss_pred             HHHHHHHHHHHhhc--CCccEEEEccccCCCCCCc-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          132 ADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       132 ~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++++++++++.+++  +++|+||||||+.. ..++ .+.+.++|++.+++|+.++++++++++|.|++   .|+||++||
T Consensus        55 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS  130 (236)
T 1ooe_A           55 EQEQSILEQTASSLQGSQVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGA  130 (236)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECC
T ss_pred             HHHHHHHHHHHHHhCCCCCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECc
Confidence            99999999999999  79999999999876 4666 77889999999999999999999999999974   489999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      . ++..+.++...|++||+++++|+++++.|++  ++||+||+|+||+++|++........  ..  ....+|+++|+.+
T Consensus       131 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~--~~~~~~~dvA~~i  205 (236)
T 1ooe_A          131 A-AAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA--DH--SSWTPLSFISEHL  205 (236)
T ss_dssp             G-GGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC--CG--GGCBCHHHHHHHH
T ss_pred             h-hhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCc--cc--cccCCHHHHHHHH
Confidence            8 6677888899999999999999999999998  99999999999999999864321110  01  1123688888877


Q ss_pred             hhhh
Q 016493          287 VPRI  290 (388)
Q Consensus       287 l~~~  290 (388)
                      +..+
T Consensus       206 ~~~l  209 (236)
T 1ooe_A          206 LKWT  209 (236)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=4e-35  Score=270.69  Aligned_cols=205  Identities=14%  Similarity=0.084  Sum_probs=172.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.++|+++||||++|||+++|++|+++|++|++++|++++++                           ....++++|++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~D~~   56 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------------------SASVIVKMTDS   56 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------------------SEEEECCCCSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------------------CCcEEEEcCCC
Confidence            457899999999999999999999999999999999875421                           23567899999


Q ss_pred             CHHHHHHHHHHHHhhc--CCccEEEEccccCCCCCCc-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          130 EPADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |+++++++++++.+++  +++|+||||||+.. ..++ .+.+.++|++++++|+.++++++++++|.|++   +|+||++
T Consensus        57 ~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~i  132 (241)
T 1dhr_A           57 FTEQADQVTAEVGKLLGDQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLA  132 (241)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEE
Confidence            9999999999999999  79999999999876 4666 78889999999999999999999999999975   4899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ||. ++..+.++...|++||+++++|+++++.|++  ++||+||+|+||+|+|++........  ..  ....+|+++|+
T Consensus       133 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~--~~~~~~~~vA~  207 (241)
T 1dhr_A          133 GAK-AALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA--DF--SSWTPLEFLVE  207 (241)
T ss_dssp             CCG-GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS--CG--GGSEEHHHHHH
T ss_pred             CCH-HHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch--hh--ccCCCHHHHHH
Confidence            998 6777888899999999999999999999999  89999999999999999864321110  01  11235777777


Q ss_pred             HHhhhh
Q 016493          285 TLVPRI  290 (388)
Q Consensus       285 ~~l~~~  290 (388)
                      .++..+
T Consensus       208 ~v~~l~  213 (241)
T 1dhr_A          208 TFHDWI  213 (241)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            765443

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.3e-36  Score=289.31  Aligned_cols=258  Identities=17%  Similarity=0.143  Sum_probs=186.7

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+++.-. ..........+.. .....   .........+.+
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~   78 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNI-FETSLRRGKFDQS-RVLPD---GSLMEIKKVYPL   78 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHH-HHHHHHTTTTTGG-GBCTT---SSBCCEEEEEEE
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchh-hhhhhhhhHhhhh-hhhcc---cccccccccccc
Confidence            56889999999999  99999999999999999999998743210 0000100000000 00000   000011223333


Q ss_pred             c--------CC----C--------HHHHHHHHHHHHhhcCCccEEEEccccCC-CCCCcCCCCHHHHHHHHHhhchHHHH
Q 016493          127 D--------VC----E--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSIL  185 (388)
Q Consensus       127 D--------ls----~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~  185 (388)
                      |        ++    |        +++++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.++++
T Consensus        79 ~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  158 (297)
T 1d7o_A           79 DAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             CTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             ceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHH
Confidence            2        32    2        67899999999999999999999999743 24677889999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccC
Q 016493          186 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       186 l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~  263 (388)
                      ++++++|.|++   +|+||++||. ++..+.++. ..|++||+|+++|+++++.|+++ +||+||+|+||+|+|++....
T Consensus       159 l~~~~~~~m~~---~g~iv~isS~-~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~  234 (297)
T 1d7o_A          159 LLSHFLPIMNP---GGASISLTYI-ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             HHHHHGGGEEE---EEEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred             HHHHHHHHhcc---CceEEEEecc-ccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc
Confidence            99999999975   3899999998 566777777 69999999999999999999985 899999999999999986532


Q ss_pred             ccchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          264 STIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       264 ~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..  .....      .......+++++..|++++..+.||+++...+.++..+..||++.
T Consensus       235 ~~--~~~~~------~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          235 GF--IDTMI------EYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             SH--HHHHH------HHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cc--cHHHH------HHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            10  00000      001112244566677888888888888877677777777777764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=7.4e-36  Score=310.66  Aligned_cols=234  Identities=23%  Similarity=0.278  Sum_probs=180.1

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC---------ChHHHHHHHHHHHHHHhhhhhhcCCCCccccc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR---------SSESVRMTVTELEENLKEGMMAAGGSSKKNLV  117 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~  117 (388)
                      ..++++||++|||||++|||+++|++|+++|++|++++|         +.++++++.+++.+.                 
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~-----------------   75 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA-----------------   75 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT-----------------
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh-----------------
Confidence            357899999999999999999999999999999999988         677777777777552                 


Q ss_pred             CceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 016493          118 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  197 (388)
Q Consensus       118 ~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  197 (388)
                      +..   ..+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++
T Consensus        76 ~~~---~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~  151 (613)
T 3oml_A           76 GGE---AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ  151 (613)
T ss_dssp             TCC---EEECCCCGGGHHHHHC----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCe---EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            222   247999999999999999999999999999999987 5788999999999999999999999999999999988


Q ss_pred             CCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc
Q 016493          198 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  277 (388)
Q Consensus       198 ~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  277 (388)
                       +.|+||++||. ++..+.++...|++||+|+.+|+++|+.|++++||+||+|+||.+ |++......            
T Consensus       152 -~~g~IV~isS~-a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~------------  216 (613)
T 3oml_A          152 -NYGRIIMTSSN-SGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP------------  216 (613)
T ss_dssp             -TCEEEEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC------------
T ss_pred             -CCCEEEEECCH-HHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc------------
Confidence             57999999998 677788889999999999999999999999999999999999975 655433211            


Q ss_pred             CHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          278 LPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                        +.     +.+...|++++..+.||+++. .+.+|..+..+|+|..
T Consensus       217 --~~-----~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG~~~  255 (613)
T 3oml_A          217 --DI-----LFNELKPKLIAPVVAYLCHES-CEDNGSYIESAAGWAT  255 (613)
T ss_dssp             --HH-----HHTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETTEEE
T ss_pred             --hh-----hhhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCCeEE
Confidence              00     112236777777788888887 6678888888887744

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7e-34  Score=262.14  Aligned_cols=209  Identities=18%  Similarity=0.268  Sum_probs=171.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++|+++||||++|||+++|++|+++|  ++|++++|+.++++++.+ +                   .+.++.++.+|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~-------------------~~~~~~~~~~D~~   61 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I-------------------KDSRVHVLPLTVT   61 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C-------------------CCTTEEEEECCTT
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c-------------------cCCceEEEEeecC
Confidence            57999999999999999999999999  999999999887654311 1                   1356889999999


Q ss_pred             CHHHHHHHHHHHHhhcC--CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC------CC--
Q 016493          130 EPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ------PK--  199 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~------~~--  199 (388)
                      |+++++++++++.+++|  ++|+||||||+..+..++.+.+.+++++++++|+.++++++++++|.|+++      +.  
T Consensus        62 ~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~  141 (250)
T 1yo6_A           62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLS  141 (250)
T ss_dssp             CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCC
T ss_pred             CHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCccc
Confidence            99999999999999998  999999999987534677888999999999999999999999999999764      21  


Q ss_pred             --CcEEEEecCCCCCCCCC-------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh
Q 016493          200 --GGHIFNMDGAGSGGSST-------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ  270 (388)
Q Consensus       200 --~g~Iv~isS~~~~~~~~-------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  270 (388)
                        .++||++||. .+..+.       ++...|++||+++++|+++++.|++++||+|++|+||+|+|++....       
T Consensus       142 ~~~~~iv~isS~-~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------  213 (250)
T 1yo6_A          142 VSRAAVITISSG-LGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------  213 (250)
T ss_dssp             TTTCEEEEECCG-GGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------
T ss_pred             CCCcEEEEeccC-ccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCC-------
Confidence              6899999997 444444       56789999999999999999999999999999999999999986421       


Q ss_pred             hhhhhccCHHHHHHHHhhhhhh
Q 016493          271 MFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       271 ~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                          ...+|+++|+.++..+..
T Consensus       214 ----~~~~~~~~a~~~~~~~~~  231 (250)
T 1yo6_A          214 ----AALTVEQSTAELISSFNK  231 (250)
T ss_dssp             ---------HHHHHHHHHHHTT
T ss_pred             ----CCCCHHHHHHHHHHHHhc
Confidence                123789999998877654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1e-33  Score=264.52  Aligned_cols=218  Identities=20%  Similarity=0.222  Sum_probs=180.8

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G---~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      .....++++|++|||||++|||+++|++|+++|   ++|++++|+.++++.+ +++.+.                 +.++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~-----------------~~~~   74 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN-----------------HSNI   74 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH-----------------CTTE
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc-----------------CCce
Confidence            344567889999999999999999999999999   9999999998776543 333321                 2468


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcC--CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC--
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ--  197 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--  197 (388)
                      .++.+|++|.++++++++++.+.++  ++|+||||||+..+..++.+.+.+++++++++|+.++++++++++|.|+++  
T Consensus        75 ~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  154 (267)
T 1sny_A           75 HILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAK  154 (267)
T ss_dssp             EEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhccc
Confidence            8999999999999999999999998  899999999986534677889999999999999999999999999999865  


Q ss_pred             ----CC----CcEEEEecCCCCCCCCC---CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc
Q 016493          198 ----PK----GGHIFNMDGAGSGGSST---PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI  266 (388)
Q Consensus       198 ----~~----~g~Iv~isS~~~~~~~~---~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~  266 (388)
                          +.    .++||++||. .+..+.   ++...|++||+++++|+++++.|++++||+|++|+||+|+|++....   
T Consensus       155 ~~~~~~~~~~~~~iv~isS~-~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---  230 (267)
T 1sny_A          155 ANESQPMGVGRAAIINMSSI-LGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS---  230 (267)
T ss_dssp             HTTTSCSSTTTCEEEEECCG-GGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT---
T ss_pred             ccccccccCCCceEEEEecc-cccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC---
Confidence                21    5899999997 444443   36778999999999999999999999999999999999999986421   


Q ss_pred             hhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          267 QNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       267 ~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                              ...+|+++|+.++..+..
T Consensus       231 --------~~~~~~~~a~~~~~~~~~  248 (267)
T 1sny_A          231 --------APLDVPTSTGQIVQTISK  248 (267)
T ss_dssp             --------CSBCHHHHHHHHHHHHHH
T ss_pred             --------CCCCHHHHHHHHHHHHHh
Confidence                    124799999999887754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=2.1e-34  Score=267.56  Aligned_cols=206  Identities=13%  Similarity=0.093  Sum_probs=172.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+.-+|++|||||++|||+++|++|+++|++|++++|+.++++                             -..+.+|+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------------------------~~~~~~d~   68 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------------------------DHSFTIKD   68 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------------------------SEEEECSC
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------------------ccceEEEe
Confidence            3445899999999999999999999999999999999876421                             12478999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.++++++|+||||||+..+..++.+.+.+++++++++|+.++++++++++|.|++   .|+||++||
T Consensus        69 ~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS  145 (251)
T 3orf_A           69 SGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGA  145 (251)
T ss_dssp             SSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEec
Confidence            99999999999999999999999999998763334678889999999999999999999999999975   489999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      . ++..+.++...|++||+|+++|+++++.|++  ++||+||+|+||+|+|++.........  .  ....+|+++|+.+
T Consensus       146 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~--~~~~~~~dva~~i  220 (251)
T 3orf_A          146 S-AALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDAN--F--DDWTPLSEVAEKL  220 (251)
T ss_dssp             G-GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTSC--G--GGSBCHHHHHHHH
T ss_pred             h-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccccc--c--cccCCHHHHHHHH
Confidence            8 6778889999999999999999999999987  899999999999999998643221111  1  1123688888877


Q ss_pred             hhhhh
Q 016493          287 VPRIR  291 (388)
Q Consensus       287 l~~~~  291 (388)
                      +..+.
T Consensus       221 ~~l~~  225 (251)
T 3orf_A          221 FEWST  225 (251)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            76554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1e-34  Score=287.10  Aligned_cols=228  Identities=14%  Similarity=0.115  Sum_probs=184.1

Q ss_pred             CCCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCChHHH------------HHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           51 AGPRNVVITGSTRGLGKA--LAREFLLSGDRVVVASRSSESV------------RMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~a--iA~~La~~G~~Vil~~R~~~~l------------~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      ..||++|||||++|||++  +|+.|+++|++|++++|+.+..            +.+.+.+.+                 
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  120 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK-----------------  120 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH-----------------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH-----------------
Confidence            689999999999999999  9999999999999999976442            222222222                 


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCC------------CCCCc--------------------
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK------------GFKPL--------------------  164 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~------------~~~~~--------------------  164 (388)
                      .+.++..+.+|++|+++++++++++.+++|++|+||||||...            ...++                    
T Consensus       121 ~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~  200 (418)
T 4eue_A          121 KGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKK  200 (418)
T ss_dssp             TTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEE
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccccccc
Confidence            3467889999999999999999999999999999999999841            12333                    


Q ss_pred             -CCCCHHHHHHHHHhhchHHH-HHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHh
Q 016493          165 -LQFTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES  240 (388)
Q Consensus       165 -~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSK~al~~l~~~la~el  240 (388)
                       .+.+.++|++++++|..+.+ .+++.+++.+... ++|+||++||. ++..+.|.+  ..|++||+|+.+|+++|+.|+
T Consensus       201 ~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~-~gg~IV~iSSi-~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          201 VSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFS-DKATTIAYSYI-GSPRTYKIYREGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             ECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE-EEEEEEEEECC-CCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-CCcEEEEEeCc-hhcCCCCccccHHHHHHHHHHHHHHHHHHHHh
Confidence             46799999999999999988 7788877754443 36899999998 677778877  999999999999999999999


Q ss_pred             CC-CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHH
Q 016493          241 KR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR  307 (388)
Q Consensus       241 ~~-~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~  307 (388)
                      ++ +|||||+|+||+|+|++........          .-......++++.+.+++++..+.||+++.
T Consensus       279 a~~~GIrVN~V~PG~v~T~~s~~ip~~p----------~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~  336 (418)
T 4eue_A          279 NRVIGGRAFVSVNKALVTKASAYIPTFP----------LYAAILYKVMKEKNIHENCIMQIERMFSEK  336 (418)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHTSTTHH----------HHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             CCccCeEEEEEECCcCcChhhhcCCCCc----------HHHHHHHHHHhhcCChHHHHHHHHHHhhcc
Confidence            99 9999999999999999865432100          001122346788889999998888888875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=6.7e-33  Score=259.08  Aligned_cols=208  Identities=23%  Similarity=0.309  Sum_probs=174.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~-~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++|++|||||++|||+++|++|++ +|++|++++|+.+++++..+++.+                 .+.++.++.+|++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~   64 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-----------------EGLSPRFHQLDID   64 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-----------------TTCCCEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-----------------cCCeeEEEECCCC
Confidence            4689999999999999999999999 999999999999888887777754                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCC-HHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT-NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      |.++++++++++.++++++|+||||||... ... .+.+ .+++++++++|+.++++++++++|.|++   .++||++||
T Consensus        65 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS  139 (276)
T 1wma_A           65 DLQSIRALRDFLRKEYGGLDVLVNNAGIAF-KVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSS  139 (276)
T ss_dssp             CHHHHHHHHHHHHHHHSSEEEEEECCCCCC-CTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCcccc-cCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECC
Confidence            999999999999999999999999999865 222 3444 5899999999999999999999999875   379999998


Q ss_pred             CCCCCC------------------------------------------CCCCchhhHHHHHHHHHHHHHHHHHhCC----
Q 016493          209 AGSGGS------------------------------------------STPLTAVYGSTKCGLRQLQASLFKESKR----  242 (388)
Q Consensus       209 ~~~~~~------------------------------------------~~~~~~~Y~aSK~al~~l~~~la~el~~----  242 (388)
                      .. +..                                          +.| ...|++||++++.|++.++.|+++    
T Consensus       140 ~~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~  217 (276)
T 1wma_A          140 IM-SVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKG  217 (276)
T ss_dssp             HH-HHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             hh-hhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCC
Confidence            62 221                                          112 378999999999999999999987    


Q ss_pred             CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhc
Q 016493          243 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       243 ~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~  293 (388)
                      .||+||+|+||+|+|++....           ...+|+++|+.++..+..+
T Consensus       218 ~~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          218 DKILLNACCPGWVRTDMAGPK-----------ATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             SCCEEEEEECCSBCSTTTCTT-----------CSBCHHHHTHHHHHHHSCC
T ss_pred             CceEEEEecCCccccCcCCcc-----------ccCChhHhhhhHhhhhcCc
Confidence            799999999999999986431           1247899988887666433

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-32  Score=252.19  Aligned_cols=178  Identities=27%  Similarity=0.326  Sum_probs=157.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+++||||++|||+++|++|+++|++|++++|+.+ .                            .++.++++|++|++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------------------------~~~~~~~~D~~~~~   52 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------------------------EDLIYVEGDVTREE   52 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------------------------SSSEEEECCTTCHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------------------------cceEEEeCCCCCHH
Confidence            689999999999999999999999999999999864 1                            23578999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCC----CHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-----CCcEE
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF----TNEEIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHI  203 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~~g~I  203 (388)
                      +++++++++ +.++++|++|||||... ..++.+.    +.+++++++++|+.++++++++++|.|++++     ..++|
T Consensus        53 ~~~~~~~~~-~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  130 (242)
T 1uay_A           53 DVRRAVARA-QEEAPLFAVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVI  130 (242)
T ss_dssp             HHHHHHHHH-HHHSCEEEEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEE
T ss_pred             HHHHHHHHH-HhhCCceEEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Confidence            999999999 88899999999999876 3555444    3459999999999999999999999998763     23599


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      |++||. ++..+.++...|++||++++.++++++.|++++||+||+|+||+|.|++...
T Consensus       131 v~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  188 (242)
T 1uay_A          131 VNTASV-AAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG  188 (242)
T ss_dssp             EEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT
T ss_pred             EEeCCh-hhccCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc
Confidence            999987 5666778889999999999999999999999999999999999999998654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3.4e-34  Score=266.29  Aligned_cols=218  Identities=15%  Similarity=0.153  Sum_probs=155.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||+++|++|+++|++|++++|++++++                           .  . +++|++|.++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~--~-~~~Dl~~~~~   51 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------------------A--D-LSTAEGRKQA   51 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------------------C--C-TTSHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------------------c--c-cccCCCCHHH
Confidence            78999999999999999999999999999999865321                           0  1 6789999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++   ++++|+||||||+..+.        +.+++++++|+.++++++++++|.|+++ +.++||++||. ++.
T Consensus        52 v~~~~~~~---~~~id~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~-~~~  118 (257)
T 1fjh_A           52 IADVLAKC---SKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSV-ASA  118 (257)
T ss_dssp             HHHHHTTC---TTCCSEEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCG-GGG
T ss_pred             HHHHHHHh---CCCCCEEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEECCh-hhh
Confidence            98887633   38999999999985411        1289999999999999999999999987 47999999997 344


Q ss_pred             ----------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccC-c
Q 016493          214 ----------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG-S  264 (388)
Q Consensus       214 ----------------------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~-~  264 (388)
                                                  .+.++...|++||++++.|+++++.|++++||+||+|+||+|+|++.... .
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  198 (257)
T 1fjh_A          119 HLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ  198 (257)
T ss_dssp             SSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------
T ss_pred             ccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc
Confidence                                        34456789999999999999999999999999999999999999986542 1


Q ss_pred             cchhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          265 TIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       265 ~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ...........        ..++++...|++++..+.|++++...+.+|..+..||++
T Consensus       199 ~~~~~~~~~~~--------~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          199 DPRYGESIAKF--------VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             ----------C--------CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             chhHHHHHHhc--------ccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            11000000000        012233445555555556666655444445555555554

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.98  E-value=4.7e-32  Score=302.75  Aligned_cols=246  Identities=20%  Similarity=0.226  Sum_probs=196.7

Q ss_pred             hcccCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           46 EEHCKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~G-IG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ...++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+....             .+.++.+
T Consensus       668 ~~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~-------------~g~~v~~  734 (1887)
T 2uv8_A          668 FNGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-------------KGSTLIV  734 (1887)
T ss_dssp             HTCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-------------TTCEEEE
T ss_pred             cccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhc-------------CCCeEEE
Confidence            3456789999999999998 9999999999999999998 68888888887777654321             2467899


Q ss_pred             EEccCCCHHHHHHHHHHHHhh-----cC-CccEEEEccccCCCCC-CcCCCC--HHHHHHHHHhhchHHHHHHHHH--HH
Q 016493          124 IACDVCEPADVQKLSNFAVNE-----FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTREA--MR  192 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~-----~g-~iD~li~nAG~~~~~~-~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--lp  192 (388)
                      +.||++|.++++++++++.++     +| ++|+||||||+.. .+ ++.+.+  .++|++++++|+.+++.+++.+  +|
T Consensus       735 v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp  813 (1887)
T 2uv8_A          735 VPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSAR  813 (1887)
T ss_dssp             EECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999999988     66 9999999999976 45 788888  8999999999999999999988  78


Q ss_pred             HHHcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-ccccccCccchhhh
Q 016493          193 VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-QASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQ  270 (388)
Q Consensus       193 ~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l-~~~la~el~~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~  270 (388)
                      .|+++ +.|+||++||. ++..+  +...|++||+|+.+| ++.++.|+++. |+||+|+||+|+ |+|...... .   
T Consensus       814 ~m~~~-~~G~IVnISS~-ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~-~---  884 (1887)
T 2uv8_A          814 GIETR-PAQVILPMSPN-HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI-I---  884 (1887)
T ss_dssp             TCCSC-CEEEEEEECSC-TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCT-T---
T ss_pred             hhhhC-CCCEEEEEcCh-HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchh-H---
Confidence            88776 46899999997 45554  678999999999999 99999999988 999999999999 888643110 0   


Q ss_pred             hhhhhccCHHHHHHHHhhhhhhccccccceeeccCHH-HHHHHHHhHhhc--Cccc
Q 016493          271 MFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRR--GRWF  323 (388)
Q Consensus       271 ~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~--g~~~  323 (388)
                              .+...+.++ +...|++++..+.||+++. ..+.++..+..|  |++.
T Consensus       885 --------~~~~~~~pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~  931 (1887)
T 2uv8_A          885 --------AEGIEKMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ  931 (1887)
T ss_dssp             --------HHHHHTTSC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTT
T ss_pred             --------HHHHHhcCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCee
Confidence                    011111111 3336677777778899988 678888887654  7764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=6.2e-31  Score=268.59  Aligned_cols=218  Identities=13%  Similarity=0.130  Sum_probs=179.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEE-eCCh-------------HHHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVA-SRSS-------------ESVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~-~R~~-------------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      ++|++|||||++|||+++|+.|+++|++ |+++ +|+.             ++++++.+++.+                 
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------  312 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-----------------  312 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH-----------------
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-----------------
Confidence            5799999999999999999999999987 7777 8984             445566666654                 


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      .+.++.++.||++|.++++++++++. +++++|+||||||+.. .+++.+.+.+++++++++|+.|++++.+.+.|.|++
T Consensus       313 ~g~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~  390 (525)
T 3qp9_A          313 LGATATVVTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAA  390 (525)
T ss_dssp             HTCEEEEEECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred             cCCEEEEEECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            35689999999999999999999988 7899999999999987 688999999999999999999999999999999987


Q ss_pred             CCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhc
Q 016493          197 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC  276 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  276 (388)
                      ++..++||++||. ++..+.++...|+++|+++++|+    +++.+.||++++|+||+++|+|.................
T Consensus       391 ~~~~~~iV~~SS~-a~~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~  465 (525)
T 3qp9_A          391 GGRPPVLVLFSSV-AAIWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRP  465 (525)
T ss_dssp             --CCCEEEEEEEG-GGTTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCC
T ss_pred             CCCCCEEEEECCH-HHcCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCC
Confidence            6437899999998 77888999999999999888874    577888999999999999999875322211111223344


Q ss_pred             cCHHHHHHHHhhhhhhc
Q 016493          277 ELPETVARTLVPRIRVV  293 (388)
Q Consensus       277 ~~pe~vA~~~l~~~~~~  293 (388)
                      ++|+++++.+...+...
T Consensus       466 l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          466 LAPATALTALDTALGHG  482 (525)
T ss_dssp             BCHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            68999999888777644

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.3e-32  Score=295.09  Aligned_cols=246  Identities=20%  Similarity=0.221  Sum_probs=195.9

Q ss_pred             hcccCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           46 EEHCKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~G-IG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ...++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.++...             .+.++.+
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a-------------~Ga~V~v  535 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-------------KGSTLIV  535 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCC-------------TTCEEEE
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhc-------------CCCeEEE
Confidence            3456789999999999998 9999999999999999998 68777776666655332111             2467899


Q ss_pred             EEccCCCHHHHHHHHHHHHhh-----cC-CccEEEEccccCCCCC-CcCCCC--HHHHHHHHHhhchHHHHHHHHH--HH
Q 016493          124 IACDVCEPADVQKLSNFAVNE-----FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTREA--MR  192 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~-----~g-~iD~li~nAG~~~~~~-~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--lp  192 (388)
                      +.+|++|.++++++++++.++     +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.+  +|
T Consensus       536 V~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp  614 (1688)
T 2pff_A          536 VPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSAR  614 (1688)
T ss_dssp             EECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence            999999999999999999988     77 9999999999876 45 788888  8999999999999999999998  88


Q ss_pred             HHHcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-ccccccCccchhhh
Q 016493          193 VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-QASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQ  270 (388)
Q Consensus       193 ~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l-~~~la~el~~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~  270 (388)
                      .|+++ +.|+||++||. ++..+  +...|++||+|+.+| ++.++.|+++. |+||+|+||+|+ |++...... ... 
T Consensus       615 ~M~kr-ggGrIVnISSi-AG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~-~~~-  687 (1688)
T 2pff_A          615 GIETR-PAQVILPMSPN-HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI-IAE-  687 (1688)
T ss_dssp             TCTTS-CEEECCCCCSC-TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTT-CST-
T ss_pred             HHHhC-CCCEEEEEECh-HhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchH-HHH-
Confidence            88876 46899999997 45554  678999999999999 78889999887 999999999999 787643110 000 


Q ss_pred             hhhhhccCHHHHHHHHhhhhhhccccccceeeccCHH-HHHHHHHhHhhc--Cccc
Q 016493          271 MFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRR--GRWF  323 (388)
Q Consensus       271 ~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~--g~~~  323 (388)
                         ...       +..+ +...|++++..+.||+++. ..+.++..+..|  |++.
T Consensus       688 ---~l~-------~ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~  732 (1688)
T 2pff_A          688 ---GIE-------KMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ  732 (1688)
T ss_dssp             ---TTS-------SSSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGG
T ss_pred             ---HHH-------hCCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCee
Confidence               000       0111 3347888888888998887 667777777654  7664

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=1.3e-30  Score=290.53  Aligned_cols=245  Identities=18%  Similarity=0.202  Sum_probs=190.2

Q ss_pred             cccCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           47 EHCKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~G-IG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      ..++++||++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.++...             .+.++.++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~-------------~G~~v~~v  712 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGA-------------RGSQLVVV  712 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-------------TTCEEEEE
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhc-------------cCCeEEEE
Confidence            446789999999999999 99999999999999999985 7777877777777554321             24678999


Q ss_pred             EccCCCHHHHHHHHHHHHhh---cC-CccEEEEccccCCCCC-CcCCCC--HHHHHHHHHhhchHHHHHHHH--HHHHHH
Q 016493          125 ACDVCEPADVQKLSNFAVNE---FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTRE--AMRVMR  195 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~---~g-~iD~li~nAG~~~~~~-~~~~~~--~~~~~~~~~vN~~g~~~l~~~--~lp~m~  195 (388)
                      .||++|.++++++++++.++   +| ++|+||||||+.. .+ ++.+.+  .++|++++++|+.+++.+++.  ++|.|+
T Consensus       713 ~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~  791 (1878)
T 2uv9_A          713 PFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYE  791 (1878)
T ss_dssp             ECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             EcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            99999999999999999998   89 9999999999976 45 788898  899999999999999999987  778887


Q ss_pred             cCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHH-HhCCCCeEEEEEecCccc-ccccccCccchhhhhhh
Q 016493          196 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK-ESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFN  273 (388)
Q Consensus       196 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~-el~~~gI~vn~v~PG~v~-T~~~~~~~~~~~~~~~~  273 (388)
                      ++ +.|+||++||. ++..+  +...|++||+|+.+|++.++. |+++. |+||+|+||+++ |+|..... ..      
T Consensus       792 ~~-~~G~IVnISS~-ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~~-~~------  859 (1878)
T 2uv9_A          792 TR-PAQVILPLSPN-HGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSANN-LV------  859 (1878)
T ss_dssp             SC-CEEECCEECSC-SSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHHH-HT------
T ss_pred             hC-CCCEEEEEcch-hhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccch-hh------
Confidence            76 46899999997 55554  467899999999999887655 57776 999999999999 99864310 00      


Q ss_pred             hhccCHHHHHHHHhhhhhhccccccceeeccCHHH-HHHHHHhHhh--cCccc
Q 016493          274 IICELPETVARTLVPRIRVVKGSGKAINYLTPPRI-LLALVTAWLR--RGRWF  323 (388)
Q Consensus       274 ~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~--~g~~~  323 (388)
                           .+...+..+ +...|++++..+.||+++.. .+.++..+..  ||++.
T Consensus       860 -----~~~~~~~pl-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~  906 (1878)
T 2uv9_A          860 -----AEGVEKLGV-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQ  906 (1878)
T ss_dssp             -----HHHHHTTTC-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGG
T ss_pred             -----HHHHHhcCC-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcc
Confidence                 000111111 22245555555667777765 6666766654  36653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=2.1e-30  Score=232.53  Aligned_cols=199  Identities=21%  Similarity=0.240  Sum_probs=163.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||++|||++++++|+++  +|++++|+++++++..+++                    ..  .++.+|++|+++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~--------------------~~--~~~~~D~~~~~~   56 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV--------------------GA--RALPADLADELE   56 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH--------------------TC--EECCCCTTSHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc--------------------cC--cEEEeeCCCHHH
Confidence            68999999999999999999998  9999999988776654433                    11  778999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +++++++    ++++|++|||||... ..++.+.+.+++++.+++|+.+++++++++    +++ +.++||++||. ++.
T Consensus        57 ~~~~~~~----~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~sS~-~~~  125 (207)
T 2yut_A           57 AKALLEE----AGPLDLLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-KGARAVFFGAY-PRY  125 (207)
T ss_dssp             HHHHHHH----HCSEEEEEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-EEEEEEEECCC-HHH
T ss_pred             HHHHHHh----cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-CCcEEEEEcCh-hhc
Confidence            9998876    689999999999876 577888899999999999999999999988    333 46899999997 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhc
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~  293 (388)
                      .+.++...|++||++++.+++.++.|++++||++++|+||.+.|++.......    .  ....+|+++|+.++..+..+
T Consensus       126 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~~----~--~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          126 VQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGP----P--KGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             HSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTSC----C--TTCBCHHHHHHHHHHHHC--
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCCC----C--CCCCCHHHHHHHHHHHHhCC
Confidence            77788899999999999999999999999999999999999999984321110    1  12347999999988766543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.96  E-value=3.4e-29  Score=224.13  Aligned_cols=186  Identities=18%  Similarity=0.247  Sum_probs=159.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||++|||++++++|+ +|++|++++|+.+                                  .+.+|++|++++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------------------~~~~D~~~~~~~   49 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------------------DVTVDITNIDSI   49 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------------------SEECCTTCHHHH
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------------------ceeeecCCHHHH
Confidence            79999999999999999999 9999999999742                                  268999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++++    +++|++|||||... ..++.+.+.+++++.+++|+.+++++++++.|.|++   +++||++||. .+..
T Consensus        50 ~~~~~~~----~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~-~~~~  120 (202)
T 3d7l_A           50 KKMYEQV----GKVDAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGI-MMED  120 (202)
T ss_dssp             HHHHHHH----CCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCG-GGTS
T ss_pred             HHHHHHh----CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcch-hhcC
Confidence            9988765    78999999999876 577888999999999999999999999999999864   3899999987 5677


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhh
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  290 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~  290 (388)
                      +.++...|++||++++.+++.++.|+ ++||++++|+||++.|++.....     ........+++++|+.++..+
T Consensus       121 ~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~-----~~~~~~~~~~~dva~~~~~~~  190 (202)
T 3d7l_A          121 PIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEP-----FFEGFLPVPAAKVARAFEKSV  190 (202)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGG-----GSTTCCCBCHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhh-----hccccCCCCHHHHHHHHHHhh
Confidence            88888999999999999999999999 78999999999999999743211     111122347899999877554

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=6.6e-28  Score=243.91  Aligned_cols=222  Identities=15%  Similarity=0.197  Sum_probs=173.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH---HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +|++|||||++|||+++|++|+++|+ +|++++|+..   ..+++.+++.+                 .+.++.++.||+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~~~~Dv  301 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ-----------------LGVRVTIAACDA  301 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh-----------------cCCeEEEEEccC
Confidence            48999999999999999999999998 8999999743   35555566554                 457899999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++++.+. +++|+||||||+.....++.+.+.+++++++++|+.|++++.+.+.+.     ..++||++||
T Consensus       302 td~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~iV~~SS  375 (496)
T 3mje_A          302 ADREALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDAFVLFSS  375 (496)
T ss_dssp             TCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCEEEEEeC
Confidence            9999999999998776 789999999999733688999999999999999999999998876543     3578999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch-hhhhhhhhccCHHHHHHHHh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-NKQMFNIICELPETVARTLV  287 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~pe~vA~~~l  287 (388)
                      . ++..+.++...|+++|+++++|++.+    ...||++++|+||++.|+.+....... .........++|+++++.+.
T Consensus       376 ~-a~~~g~~g~~~YaAaKa~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~  450 (496)
T 3mje_A          376 G-AAVWGSGGQPGYAAANAYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALD  450 (496)
T ss_dssp             H-HHHTTCTTCHHHHHHHHHHHHHHHHH----HHTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHH
T ss_pred             h-HhcCCCCCcHHHHHHHHHHHHHHHHH----HhcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHH
Confidence            8 67788899999999999998888754    456999999999999876543322111 11112334468999988776


Q ss_pred             hhhhhccccccceeec
Q 016493          288 PRIRVVKGSGKAINYL  303 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l  303 (388)
                      ..+.. ++....+.++
T Consensus       451 ~~l~~-~~~~~~v~~l  465 (496)
T 3mje_A          451 QMLEN-DDTAAAITLM  465 (496)
T ss_dssp             HHHHH-TCSEEEECEE
T ss_pred             HHHcC-CCceEEEEEc
Confidence            65543 3334444444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=4.9e-28  Score=282.22  Aligned_cols=244  Identities=16%  Similarity=0.149  Sum_probs=175.1

Q ss_pred             cCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas~G-IG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      -.++||++|||||++| ||+++|+.|+++|++|++++|+.++ ..+..+++.++...             .+.++..+++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-------------~G~~~~~v~~ 2198 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-------------FDATLWVVPA 2198 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-------------TTCEEEEEEC
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-------------cCCeEEEEEe
Confidence            3589999999999999 9999999999999999999998765 22223333332211             3467889999


Q ss_pred             cCCCHHHHHHHHHHHHh----hcCCccEEEEcccc----CCCCCCcCCCCHHHH----HHHHHhhchHHHHHHHHHHHHH
Q 016493          127 DVCEPADVQKLSNFAVN----EFGSIDIWINNAGT----NKGFKPLLQFTNEEI----EQIVSTNLVGSILCTREAMRVM  194 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~----~~g~iD~li~nAG~----~~~~~~~~~~~~~~~----~~~~~vN~~g~~~l~~~~lp~m  194 (388)
                      |++|+++++++++++.+    ++|++|+||||||+    .....+..+.+.++|    +..+++|+.+++.+++.+.|.|
T Consensus      2199 Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m 2278 (3089)
T 3zen_D         2199 NMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIG 2278 (3089)
T ss_dssp             CTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998    89999999999998    221122333344444    4459999999999999999999


Q ss_pred             HcCCCC--cE-EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCccc-ccccccCccchh
Q 016493          195 RDQPKG--GH-IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVL-TDLLLSGSTIQN  268 (388)
Q Consensus       195 ~~~~~~--g~-Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~e--l~~~gI~vn~v~PG~v~-T~~~~~~~~~~~  268 (388)
                      ++++..  +. |+++|+. .+  ..++...|++||+|+.+|+++|+.|  +++ +|+||+|+||+|+ |++......   
T Consensus      2279 ~~~~~g~~~~ii~~~ss~-~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~--- 2351 (3089)
T 3zen_D         2279 AERDIASRLHVVLPGSPN-RG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA--- 2351 (3089)
T ss_dssp             HHTTCCCCEEEEEEECSS-TT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT---
T ss_pred             HHcCCCceeEEEEECCcc-cc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh---
Confidence            876322  22 3333332 22  2335568999999999999999999  665 6999999999999 776532110   


Q ss_pred             hhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHH-hHhhc--Ccc
Q 016493          269 KQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVT-AWLRR--GRW  322 (388)
Q Consensus       269 ~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~--g~~  322 (388)
                               ..+....... +...|+|++..+.||+++.....+.. .+..|  |++
T Consensus      2352 ---------~~~~~~~~~~-r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~ 2398 (3089)
T 3zen_D         2352 ---------IVSAVEEAGV-TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGL 2398 (3089)
T ss_dssp             ---------THHHHGGGSC-BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSC
T ss_pred             ---------HHHHHHhcCC-CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCc
Confidence                     0111111112 22367788888899999998665443 33333  665

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=6.7e-28  Score=257.11  Aligned_cols=209  Identities=17%  Similarity=0.170  Sum_probs=171.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-HCCC-eEEEEeCC---hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           52 GPRNVVITGSTRGLGKALAREFL-LSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La-~~G~-~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .+|+++||||++|||+++|+.|+ ++|+ +|++++|+   .+++++..+++++                 .+.++.++.|
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~G~~v~~~~~  591 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA-----------------YGAEVSLQAC  591 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEEC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh-----------------cCCcEEEEEe
Confidence            58999999999999999999999 7998 59999999   4556666666655                 3578999999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++++++.+.+ +||+||||||+.. ..++.+++.++|++++++|+.|++++.+++.|.|       +||++
T Consensus       592 Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~  662 (795)
T 3slk_A          592 DVADRETLAKVLASIPDEH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLF  662 (795)
T ss_dssp             CTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEE
T ss_pred             ecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEE
Confidence            9999999999999998776 9999999999987 6889999999999999999999999999987766       69999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch-hhhh--hhhhccCHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-NKQM--FNIICELPETVA  283 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~--~~~~~~~pe~vA  283 (388)
                      ||. ++..+.+++..|+++|+    |+++|++++++.||++|+|+||++.|+.+....... ...+  .......++++.
T Consensus       663 SS~-ag~~g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~  737 (795)
T 3slk_A          663 SSV-SGVLGSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGL  737 (795)
T ss_dssp             EET-HHHHTCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHH
T ss_pred             ccH-HhcCCCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHH
Confidence            998 78889999999999995    777778888888999999999999998653321111 1111  122334666666


Q ss_pred             HHHhhhhh
Q 016493          284 RTLVPRIR  291 (388)
Q Consensus       284 ~~~l~~~~  291 (388)
                      ..+...+.
T Consensus       738 ~~~~~~l~  745 (795)
T 3slk_A          738 SQFDAACG  745 (795)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            65554443

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=4.5e-27  Score=217.10  Aligned_cols=165  Identities=18%  Similarity=0.207  Sum_probs=140.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |++|||||+||||++++++|+++|++|++++|++++++                           .   .+.+|++|.++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------------------~---~~~~D~~~~~~   51 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------------------A---DLSTPGGRETA   51 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------------------C---CTTSHHHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------------------c---cccCCcccHHH
Confidence            68999999999999999999999999999999865321                           0   15789999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++   .+++|+||||||....        .+++++.+++|+.++++++++++|.|+++ +.++||++||. ++.
T Consensus        52 ~~~~~~~~---~~~~d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~~  118 (255)
T 2dkn_A           52 VAAVLDRC---GGVLDGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRG-QQPAAVIVGSI-AAT  118 (255)
T ss_dssp             HHHHHHHH---TTCCSEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCG-GGG
T ss_pred             HHHHHHHc---CCCccEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhc-CCceEEEEecc-ccc
Confidence            98888754   3789999999997541        12378999999999999999999999876 46899999987 344


Q ss_pred             CCC--------------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          214 SST--------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       214 ~~~--------------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      .+.                          ++...|++||++++.+++.++.++.+.||++++|+||.+.|++..
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~  192 (255)
T 2dkn_A          119 QPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ  192 (255)
T ss_dssp             STTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH
T ss_pred             cccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh
Confidence            333                          466789999999999999999999888999999999999999764

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=4.3e-26  Score=230.92  Aligned_cols=212  Identities=19%  Similarity=0.193  Sum_probs=167.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH---HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++|||||++|||+++|++|+++|+ +|++++|+..   .++++.+++.+                 .+.++.++.||
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~~~~D  287 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-----------------LGARTTVAACD  287 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh-----------------cCCEEEEEEeC
Confidence            579999999999999999999999999 4999999875   35555555544                 34679999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++.+ +.++++|+||||||+.. .+++.+.+.+++++++++|+.|++++.+.+.+    . +.++||++|
T Consensus       288 v~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~-~~~~~V~~S  360 (486)
T 2fr1_A          288 VTDRESVRELLGGI-GDDVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTRE----L-DLTAFVLFS  360 (486)
T ss_dssp             TTCHHHHHHHHHTS-CTTSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----S-CCSEEEEEE
T ss_pred             CCCHHHHHHHHHHH-HhcCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----C-CCCEEEEEc
Confidence            99999999999988 66789999999999977 57888999999999999999999999987643    2 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc-ccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD-LLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      |. ++..+.++...|+++|+++++|++.+    ...|+++++|+||++.|+ |..... ...........++++++++.+
T Consensus       361 S~-a~~~g~~g~~~Yaaaka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~~~~-~~~~~~~g~~~i~~e~~a~~l  434 (486)
T 2fr1_A          361 SF-ASAFGAPGLGGYAPGNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAEGPV-ADRFRRHGVIEMPPETACRAL  434 (486)
T ss_dssp             EH-HHHTCCTTCTTTHHHHHHHHHHHHHH----HHTTCCCEEEEECCBC-------------CTTTTEECBCHHHHHHHH
T ss_pred             Ch-HhcCCCCCCHHHHHHHHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccchhH-HHHHHhcCCCCCCHHHHHHHH
Confidence            97 56677888999999999998887654    445899999999999886 432211 000011123346899999998


Q ss_pred             hhhhhhc
Q 016493          287 VPRIRVV  293 (388)
Q Consensus       287 l~~~~~~  293 (388)
                      ...+...
T Consensus       435 ~~~l~~~  441 (486)
T 2fr1_A          435 QNALDRA  441 (486)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhCC
Confidence            8777543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=3e-25  Score=225.70  Aligned_cols=209  Identities=17%  Similarity=0.208  Sum_probs=168.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH---HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+|++|||||++|||+++|++|+++|+ +|++++|+..   .++++.+++.+                 .+.++.++.||
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~~~~D  320 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG-----------------HGCEVVHAACD  320 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT-----------------TTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh-----------------cCCEEEEEEeC
Confidence            579999999999999999999999999 6999999874   34555555543                 34679999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++.     +++|+||||||+.. ..++.+.+.+++++++++|+.|++++.+.+.+ +   .+.++||++|
T Consensus       321 vtd~~~v~~~~~~-----~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~-~---~~~~~~V~~S  390 (511)
T 2z5l_A          321 VAERDALAALVTA-----YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTAD-I---KGLDAFVLFS  390 (511)
T ss_dssp             SSCHHHHHHHHHH-----SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS-C---TTCCCEEEEE
T ss_pred             CCCHHHHHHHHhc-----CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhh-c---cCCCEEEEEe
Confidence            9999999998876     68999999999977 67888999999999999999999999887532 1   1357899999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      |. ++..+.++...|+++|+++++|++.+    ...|+++++|+||++ +|+|...... ..........++|+++++.+
T Consensus       391 S~-a~~~g~~g~~~YaaaKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~~~-~~~~~~g~~~l~~e~~a~~l  464 (511)
T 2z5l_A          391 SV-TGTWGNAGQGAYAAANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGAGE-ESLSRRGLRAMDPDAAVDAL  464 (511)
T ss_dssp             EG-GGTTCCTTBHHHHHHHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCHHH-HHHHHHTBCCBCHHHHHHHH
T ss_pred             CH-HhcCCCCCCHHHHHHHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccccH-HHHHhcCCCCCCHHHHHHHH
Confidence            98 67778889999999999999998765    456999999999999 7887643211 11111233456899999999


Q ss_pred             hhhhhhc
Q 016493          287 VPRIRVV  293 (388)
Q Consensus       287 l~~~~~~  293 (388)
                      ...+...
T Consensus       465 ~~al~~~  471 (511)
T 2z5l_A          465 LGAMGRN  471 (511)
T ss_dssp             HHHHHHT
T ss_pred             HHHHhCC
Confidence            8877644

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=4.1e-25  Score=206.61  Aligned_cols=196  Identities=13%  Similarity=0.139  Sum_probs=155.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||+||||++++++|+++|++|++++|++.+.+                          ..++.++.+|++|.
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------------------~~~~~~~~~Dl~d~   55 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------------------GPNEECVQCDLADA   55 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------------------CTTEEEEECCTTCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------------------CCCCEEEEcCCCCH
Confidence            4689999999999999999999999999999999865421                          25688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       ++|+||||||...         .+++++++++|+.+++++++++.+    + +.++||++||. +
T Consensus        56 ~~~~~~~~-------~~D~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~-~  113 (267)
T 3rft_A           56 NAVNAMVA-------GCDGIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARA----H-GQPRIVFASSN-H  113 (267)
T ss_dssp             HHHHHHHT-------TCSEEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEEEEG-G
T ss_pred             HHHHHHHc-------CCCEEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEcch-H
Confidence            99988776       6899999999832         234789999999999999999843    3 46899999986 3


Q ss_pred             CC------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH
Q 016493          212 GG------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  279 (388)
Q Consensus       212 ~~------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  279 (388)
                      ..            .+.++...|+.||++.+.+++.++.++   |+++++|+||.|.+++.....      ..  ....+
T Consensus       114 ~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~------~~--~~~~~  182 (267)
T 3rft_A          114 TIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRM------LS--TWFSH  182 (267)
T ss_dssp             GGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTH------HH--HBCCH
T ss_pred             HhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCc------ee--eEEcH
Confidence            33            333556789999999999999999887   689999999999887542211      11  12367


Q ss_pred             HHHHHHHhhhhhhccccccceeeccCHH
Q 016493          280 ETVARTLVPRIRVVKGSGKAINYLTPPR  307 (388)
Q Consensus       280 e~vA~~~l~~~~~~~~~~~~~~~l~~~~  307 (388)
                      +++++.+...+ .+++.+..+.|++++.
T Consensus       183 ~d~a~~~~~~~-~~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          183 DDFVSLIEAVF-RAPVLGCPVVWGASAN  209 (267)
T ss_dssp             HHHHHHHHHHH-HCSCCCSCEEEECCCC
T ss_pred             HHHHHHHHHHH-hCCCCCceEEEEeCCC
Confidence            88887665444 5666777778888775

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=1.7e-23  Score=191.73  Aligned_cols=193  Identities=15%  Similarity=0.089  Sum_probs=141.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE-EEEE
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV-AGIA  125 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i-~~~~  125 (388)
                      +..+++||+++||||+|+||++++++|+++|++|++++|++++++++.+                       ..+ .++.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-----------------------~~~~~~~~   71 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-----------------------RGASDIVV   71 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----------------------TTCSEEEE
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-----------------------CCCceEEE
Confidence            4467889999999999999999999999999999999999987654321                       246 7899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++         +.+.+.++++|+||||||...         .+++++.+++|+.++.++++++...     +.++||+
T Consensus        72 ~Dl~---------~~~~~~~~~~D~vi~~ag~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~  128 (236)
T 3e8x_A           72 ANLE---------EDFSHAFASIDAVVFAAGSGP---------HTGADKTILIDLWGAIKTIQEAEKR-----GIKRFIM  128 (236)
T ss_dssp             CCTT---------SCCGGGGTTCSEEEECCCCCT---------TSCHHHHHHTTTHHHHHHHHHHHHH-----TCCEEEE
T ss_pred             cccH---------HHHHHHHcCCCEEEECCCCCC---------CCCccccchhhHHHHHHHHHHHHHc-----CCCEEEE
Confidence            9998         234455678999999999743         1357899999999999999988432     3579999


Q ss_pred             ecCCCCCCCCC---CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          206 MDGAGSGGSST---PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       206 isS~~~~~~~~---~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      +||. +...+.   +....|+.+|++++.+.+       ..||+++.|+||.+.|+....................++++
T Consensus       129 ~SS~-~~~~~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dv  200 (236)
T 3e8x_A          129 VSSV-GTVDPDQGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDV  200 (236)
T ss_dssp             ECCT-TCSCGGGSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHH
T ss_pred             EecC-CCCCCCCChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHH
Confidence            9996 344333   457899999999998875       45899999999999998643321111100001222368899


Q ss_pred             HHHHhhhhhhc
Q 016493          283 ARTLVPRIRVV  293 (388)
Q Consensus       283 A~~~l~~~~~~  293 (388)
                      |+.++..+..+
T Consensus       201 a~~~~~~~~~~  211 (236)
T 3e8x_A          201 AKVIAELVDQQ  211 (236)
T ss_dssp             HHHHHHHTTCG
T ss_pred             HHHHHHHhcCc
Confidence            99888777544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=1e-21  Score=178.01  Aligned_cols=179  Identities=11%  Similarity=0.131  Sum_probs=132.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChH-HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La-~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      |+++||||+||||++++++|+ ++|++|++++|+++ +++++.    +                 ...++.++++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~-----------------~~~~~~~~~~D~~d~   64 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I-----------------DHERVTVIEGSFQNP   64 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H-----------------TSTTEEEEECCTTCH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c-----------------CCCceEEEECCCCCH
Confidence            789999999999999999999 89999999999987 654432    1                 135688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       ++|+||||||..                    |+.     ++.+++.|++. +.++||++||. +
T Consensus        65 ~~~~~~~~-------~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~-~~~~iv~iSs~-~  110 (221)
T 3r6d_A           65 GXLEQAVT-------NAEVVFVGAMES--------------------GSD-----MASIVKALSRX-NIRRVIGVSMA-G  110 (221)
T ss_dssp             HHHHHHHT-------TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHT-TCCEEEEEEET-T
T ss_pred             HHHHHHHc-------CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhc-CCCeEEEEeec-e
Confidence            99888775       689999999852                    222     78889999887 46899999987 4


Q ss_pred             CCCCCCCch----------hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-hhhhhhhhhccCHH
Q 016493          212 GGSSTPLTA----------VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICELPE  280 (388)
Q Consensus       212 ~~~~~~~~~----------~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~pe  280 (388)
                      ...+.+...          .|+.+|.+++.+.+.       .||++++|+||.+.++........ ...........+++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
T 3r6d_A          111 LSGEFPVALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSRE  183 (221)
T ss_dssp             TTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEEHH
T ss_pred             ecCCCCcccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccCCccCCCceeeHH
Confidence            555444443          899999999887753       589999999999988732221111 11101111124678


Q ss_pred             HHHHHHhhhh--hhcc
Q 016493          281 TVARTLVPRI--RVVK  294 (388)
Q Consensus       281 ~vA~~~l~~~--~~~~  294 (388)
                      ++|+.++..+  ..+.
T Consensus       184 dvA~~~~~l~~~~~~~  199 (221)
T 3r6d_A          184 AVVKAIFDILHAADET  199 (221)
T ss_dssp             HHHHHHHHHHTCSCCG
T ss_pred             HHHHHHHHHHHhcChh
Confidence            8988888777  5444

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.88  E-value=6.6e-23  Score=188.02  Aligned_cols=157  Identities=18%  Similarity=0.164  Sum_probs=124.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++|+++||||+||||++++++|+++|+  +|++++|+++++++.                       ...++.++.+|+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~D~   72 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-----------------------AYKNVNQEVVDF   72 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-----------------------GGGGCEEEECCG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-----------------------ccCCceEEecCc
Confidence            4689999999999999999999999999  999999987653211                       013577899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++       ++|++|||||...        ..+.++..+++|+.++.++++++.    +. +.++||++||
T Consensus        73 ~d~~~~~~~~~-------~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~~----~~-~~~~iv~~SS  132 (242)
T 2bka_A           73 EKLDDYASAFQ-------GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAK----AG-GCKHFNLLSS  132 (242)
T ss_dssp             GGGGGGGGGGS-------SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHH----HT-TCCEEEEECC
T ss_pred             CCHHHHHHHhc-------CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHHH----HC-CCCEEEEEcc
Confidence            99988876554       7999999999743        124578899999999988887653    34 3579999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCccccccc
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI-~vn~v~PG~v~T~~~  260 (388)
                      . +...  +....|+++|++++.+++.+       ++ ++++|+||.+.||..
T Consensus       133 ~-~~~~--~~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~  175 (242)
T 2bka_A          133 K-GADK--SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQ  175 (242)
T ss_dssp             T-TCCT--TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTG
T ss_pred             C-cCCC--CCcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCC
Confidence            7 3333  34568999999999988753       45 899999999999864

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.87  E-value=1.8e-21  Score=188.62  Aligned_cols=203  Identities=16%  Similarity=0.194  Sum_probs=154.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLS-GD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~-G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ++++|+|+||||+|+||++++++|+++ |+ +|++++|++.+.+++.+++.                   ..++.++.+|
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------------------~~~v~~~~~D   78 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------------------DPRMRFFIGD   78 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------------------CTTEEEEECC
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------------------CCCEEEEECC
Confidence            467899999999999999999999999 97 99999999887766554431                   2468899999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++       ++|+||||||...  .+.   .....++.+++|+.++.++++++.+.     +.+++|++|
T Consensus        79 l~d~~~l~~~~~-------~~D~Vih~Aa~~~--~~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~S  141 (344)
T 2gn4_A           79 VRDLERLNYALE-------GVDICIHAAALKH--VPI---AEYNPLECIKTNIMGASNVINACLKN-----AISQVIALS  141 (344)
T ss_dssp             TTCHHHHHHHTT-------TCSEEEECCCCCC--HHH---HHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEC
T ss_pred             CCCHHHHHHHHh-------cCCEEEECCCCCC--CCc---hhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEec
Confidence            999998877664       6999999999743  111   12345689999999999999998774     357899999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCc-------------cchhhhhhhh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS-------------TIQNKQMFNI  274 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~-------------~~~~~~~~~~  274 (388)
                      |. ....   +...|++||++.+.++++++.++++.|+++++|+||.|.++...-..             ...... ...
T Consensus       142 S~-~~~~---p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~-~~r  216 (344)
T 2gn4_A          142 TD-KAAN---PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIR-MTR  216 (344)
T ss_dssp             CG-GGSS---CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTT-CEE
T ss_pred             CC-ccCC---CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCC-eEE
Confidence            86 3322   35789999999999999999988888999999999999886321000             000000 001


Q ss_pred             hccCHHHHHHHHhhhhhhc
Q 016493          275 ICELPETVARTLVPRIRVV  293 (388)
Q Consensus       275 ~~~~pe~vA~~~l~~~~~~  293 (388)
                      ....++++|+.++..+..+
T Consensus       217 ~~i~v~D~a~~v~~~l~~~  235 (344)
T 2gn4_A          217 FWITLDEGVSFVLKSLKRM  235 (344)
T ss_dssp             EEECHHHHHHHHHHHHHHC
T ss_pred             eeEEHHHHHHHHHHHHhhc
Confidence            1247899999988877654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=4.9e-22  Score=232.55  Aligned_cols=177  Identities=19%  Similarity=0.170  Sum_probs=138.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHH---HHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVR---MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+.+   +..+++++                 .+.++.++.||
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~g~~v~~~~~D 1945 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR-----------------QGVQVLVSTSN 1945 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH-----------------TTCEEEEECCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh-----------------CCCEEEEEecC
Confidence            5899999999999999999999999997 888999865543   33333332                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++++++. ++|+||+||||||+.. ..++.+++.++|++++++|+.|++++.+++.|.|.+.   |+||++|
T Consensus      1946 vsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~---g~iV~iS 2020 (2512)
T 2vz8_A         1946 ASSLDGARSLITEAT-QLGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL---DYFVIFS 2020 (2512)
T ss_dssp             SSSHHHHHHHHHHHH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTC---CEEEEEC
T ss_pred             CCCHHHHHHHHHHHH-hcCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC---CEEEEec
Confidence            999999999999986 4799999999999976 5788999999999999999999999999999998643   7999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV  255 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v  255 (388)
                      |. ++..+.++...|+++|+++.+|++.++.+    |+...++..|.+
T Consensus      2021 S~-ag~~g~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2021 SV-SCGRGNAGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             CH-HHHTTCTTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             ch-hhcCCCCCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            98 67788899999999999999999977764    666677777765

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.86  E-value=5.6e-21  Score=183.49  Aligned_cols=176  Identities=13%  Similarity=0.132  Sum_probs=139.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE-EccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~Dl  128 (388)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...                .+.++.++ .+|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~~D~   71 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK----------------YPGRFETAVVEDM   71 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----------------STTTEEEEECSCT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc----------------CCCceEEEEecCC
Confidence            467899999999999999999999999999999999988776555444321                12457778 8999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++       ++|+||||||... ..       +++++.+++|+.++.++++++.+.   . +.+++|++||
T Consensus        72 ~d~~~~~~~~~-------~~d~vih~A~~~~-~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~-~~~~iv~~SS  132 (342)
T 1y1p_A           72 LKQGAYDEVIK-------GAAGVAHIASVVS-FS-------NKYDEVVTPAIGGTLNALRAAAAT---P-SVKRFVLTSS  132 (342)
T ss_dssp             TSTTTTTTTTT-------TCSEEEECCCCCS-CC-------SCHHHHHHHHHHHHHHHHHHHHTC---T-TCCEEEEECC
T ss_pred             cChHHHHHHHc-------CCCEEEEeCCCCC-CC-------CCHHHHHHHHHHHHHHHHHHHHhC---C-CCcEEEEecc
Confidence            99988776554       6999999999754 11       235679999999999999988651   2 3579999998


Q ss_pred             CCCCCCCC------------------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          209 AGSGGSST------------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       209 ~~~~~~~~------------------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ......+.                              .+...|+.||.+.+.+++.++.++.. ++++++++||.+.+|
T Consensus       133 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~  211 (342)
T 1y1p_A          133 TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGT  211 (342)
T ss_dssp             GGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECC
T ss_pred             HHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECC
Confidence            73221111                              12357999999999999999999876 899999999999998


Q ss_pred             ccc
Q 016493          259 LLL  261 (388)
Q Consensus       259 ~~~  261 (388)
                      ...
T Consensus       212 ~~~  214 (342)
T 1y1p_A          212 IFD  214 (342)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.86  E-value=3.2e-21  Score=186.09  Aligned_cols=191  Identities=14%  Similarity=0.049  Sum_probs=146.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChHHH------------HHHHHHHHHHHhhhhhhcCCCCccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSESV------------RMTVTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La-~~G~~Vil~~R~~~~l------------~~~~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      ....+|+|||||||+|||+|++..|+ +.|++|+++.|+.+..            ....+++++                
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~----------------  109 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR----------------  109 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----------------
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH----------------
Confidence            45679999999999999999999999 7899999998865432            223333333                


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCC------------CC--------------------
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF------------KP--------------------  163 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~------------~~--------------------  163 (388)
                       .+.+...+.||++|.++++++++++.+++|+||+||||++.....            .|                    
T Consensus       110 -~G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~  188 (401)
T 4ggo_A          110 -EGLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEI  188 (401)
T ss_dssp             -HTCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEE
T ss_pred             -cCCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccc
Confidence             357899999999999999999999999999999999999975310            11                    


Q ss_pred             -cCCCCHHHHHHHHH---hhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC--CchhhHHHHHHHHHHHHHHH
Q 016493          164 -LLQFTNEEIEQIVS---TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP--LTAVYGSTKCGLRQLQASLF  237 (388)
Q Consensus       164 -~~~~~~~~~~~~~~---vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~--~~~~Y~aSK~al~~l~~~la  237 (388)
                       +...+.++++....   ....+.+...+...+.|.   .+++++.+|+. +.....|  ....++++|++|+..++.|+
T Consensus       189 ~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla---~G~siva~SYi-Gse~t~P~Y~~G~mG~AKaaLEa~~r~La  264 (401)
T 4ggo_A          189 SAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLE---EGCITLAYSYI-GPEATQALYRKGTIGKAKEHLEATAHRLN  264 (401)
T ss_dssp             EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE---EEEEEEEEECC-CCGGGHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred             cccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhccc---CCceEEEEecc-CcceeecCCCccHHHHHHHHHHHHHHHHH
Confidence             12235555555544   455556666666666665   36899999987 3433333  33478999999999999999


Q ss_pred             HHhCCCCeEEEEEecCccccccccc
Q 016493          238 KESKRSKVGVHTASPGMVLTDLLLS  262 (388)
Q Consensus       238 ~el~~~gI~vn~v~PG~v~T~~~~~  262 (388)
                      .|+++  +++|+++||.+.|+....
T Consensus       265 ~eL~~--~~a~v~v~~a~vT~Assa  287 (401)
T 4ggo_A          265 KENPS--IRAFVSVNKGLVTRASAV  287 (401)
T ss_dssp             HHCTT--EEEEEEECCCCCCTTGGG
T ss_pred             HhcCC--CcEEEEEcCccccchhhc
Confidence            99984  899999999999986543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.86  E-value=6.5e-21  Score=183.46  Aligned_cols=174  Identities=19%  Similarity=0.096  Sum_probs=137.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+++||||||+|+||++++++|+++|++|++++|+.++.++..+++.+.                .+.++.++.+|++|.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~   67 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI----------------TGKTPAFHETDVSDE   67 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH----------------HSCCCEEECCCTTCH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh----------------cCCCceEEEeecCCH
Confidence            5689999999999999999999999999999999887766665555442                134688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++.     +++|++|||||.... .    ...+..++.+++|+.++.++++++    ++. +.++||++||.. 
T Consensus        68 ~~~~~~~~~-----~~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~SS~~-  131 (341)
T 3enk_A           68 RALARIFDA-----HPITAAIHFAALKAV-G----ESVAKPIEYYRNNLDSLLSLLRVM----RER-AVKRIVFSSSAT-  131 (341)
T ss_dssp             HHHHHHHHH-----SCCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHH----HHT-TCCEEEEEEEGG-
T ss_pred             HHHHHHHhc-----cCCcEEEECcccccc-C----ccccChHHHHHHHHHHHHHHHHHH----HhC-CCCEEEEEecce-
Confidence            999988875     479999999998541 1    123345678899999998877654    444 357999999862 


Q ss_pred             CC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          212 GG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       212 ~~-----------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .+           .+..+...|+.||.+.+.+++.++.++.  +++++.++|+.+..|.
T Consensus       132 ~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          132 VYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             GBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCC
T ss_pred             EecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCc
Confidence            22           1122346899999999999999998874  5999999999997763

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.85  E-value=7.5e-21  Score=184.39  Aligned_cols=178  Identities=16%  Similarity=0.067  Sum_probs=140.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.++.+...+.+.                  ...++.++.+|++|
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~d   68 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------------------VADGMQSEIGDIRD   68 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT------------------TTTTSEEEECCTTC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc------------------cCCceEEEEccccC
Confidence            467899999999999999999999999999999998765443322221                  12467889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .+++.++++.+     ++|+||||||...     .+.+.++++..+++|+.++.++++++.+.   . +.+++|++||..
T Consensus        69 ~~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~v~~SS~~  134 (357)
T 1rkx_A           69 QNKLLESIREF-----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDK  134 (357)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGG
T ss_pred             HHHHHHHHHhc-----CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEecCHH
Confidence            99999888765     7999999999632     12345667899999999999999998763   1 357999999863


Q ss_pred             C-C-------CC---CCCCchhhHHHHHHHHHHHHHHHHHhC------CCCeEEEEEecCccccccc
Q 016493          211 S-G-------GS---STPLTAVYGSTKCGLRQLQASLFKESK------RSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       211 ~-~-------~~---~~~~~~~Y~aSK~al~~l~~~la~el~------~~gI~vn~v~PG~v~T~~~  260 (388)
                      . +       ..   +..+...|+.||.+.+.+++.++.++.      +.|++++.++||.+.+|..
T Consensus       135 vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          135 CYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             GBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             HhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence            1 0       11   223457899999999999999999885      4489999999999998753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.84  E-value=3e-20  Score=178.92  Aligned_cols=171  Identities=15%  Similarity=0.074  Sum_probs=135.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |+||||||+|+||++++++|+++|++|++++|+. ...++..+.+..                  ..++.++.+|++|.+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~------------------~~~~~~~~~Dl~d~~   63 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS------------------LGNFEFVHGDIRNKN   63 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT------------------TCCCEEEECCTTCHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc------------------CCceEEEEcCCCCHH
Confidence            5799999999999999999999999999999853 222222233321                  135788999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++..     ++|+||||||...     .+.+.++++..+++|+.++.++++++.+.+.    .+++|++||.. .
T Consensus        64 ~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~-v  128 (347)
T 1orr_A           64 DVTRLITKY-----MPDSCFHLAGQVA-----MTTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNK-V  128 (347)
T ss_dssp             HHHHHHHHH-----CCSEEEECCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGG-G
T ss_pred             HHHHHHhcc-----CCCEEEECCcccC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHH-H
Confidence            999888752     6999999999743     1223456788999999999999999988653    26899999863 2


Q ss_pred             CC---------------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          213 GS---------------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       213 ~~---------------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      +.                           +.++...|+.||.+.+.+++.++.++   |+++++++||.|.+|..
T Consensus       129 ~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~  200 (347)
T 1orr_A          129 YGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ  200 (347)
T ss_dssp             GTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred             hCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence            11                           22356789999999999999999887   79999999999999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.84  E-value=6.1e-21  Score=183.49  Aligned_cols=212  Identities=14%  Similarity=0.045  Sum_probs=151.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.++.+.  ..+.+. .              ...++.++.+|++|.
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~-~--------------~~~~~~~~~~Dl~d~   64 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKEL-G--------------IENDVKIIHMDLLEF   64 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHT-T--------------CTTTEEECCCCTTCH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhc-c--------------ccCceeEEECCCCCH
Confidence            57899999999999999999999999999999998765421  122111 0              123588899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++.+     ++|++|||||...     .+.+.++++..+++|+.++.++++++.+. .   ..+++|++||...
T Consensus        65 ~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~---~~~~iv~~SS~~v  130 (345)
T 2z1m_A           65 SNIIRTIEKV-----QPDEVYNLAAQSF-----VGVSFEQPILTAEVDAIGVLRILEALRTV-K---PDTKFYQASTSEM  130 (345)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCC-----HHHHTTSHHHHHHHHTHHHHHHHHHHHHH-C---TTCEEEEEEEGGG
T ss_pred             HHHHHHHHhc-----CCCEEEECCCCcc-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-C---CCceEEEEechhh
Confidence            9999988766     7999999999743     11223457889999999999999998752 1   1379999998621


Q ss_pred             -C---------CCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccccccccCc-----------cc-
Q 016493          212 -G---------GSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGS-----------TI-  266 (388)
Q Consensus       212 -~---------~~~~~~~~~Y~aSK~al~~l~~~la~el~---~~gI~vn~v~PG~v~T~~~~~~~-----------~~-  266 (388)
                       +         ..+.++...|+.||.+.+.+++.++.++.   ..++.++.+.||.+.|++.....           .. 
T Consensus       131 yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~  210 (345)
T 2z1m_A          131 FGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKL  210 (345)
T ss_dssp             GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCE
T ss_pred             cCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCee
Confidence             1         12334567899999999999999999876   34567788899988876521100           00 


Q ss_pred             h-hhhhhhhhccCHHHHHHHHhhhhhhcc
Q 016493          267 Q-NKQMFNIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       267 ~-~~~~~~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                      . ...........++++|+.++..+..+.
T Consensus       211 ~~~~~~~~~~~~~v~Dva~a~~~~~~~~~  239 (345)
T 2z1m_A          211 VLGNLNAKRDWGYAPEYVEAMWLMMQQPE  239 (345)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred             eeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            0 000000112368999999887775443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.84  E-value=3.1e-20  Score=170.59  Aligned_cols=198  Identities=14%  Similarity=0.060  Sum_probs=137.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..+|+++||||+|+||++++++|+++  |++|++++|++++++++                        ..++.++.+|+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------------------~~~~~~~~~D~   57 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------------------GGEADVFIGDI   57 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------------------TCCTTEEECCT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------------------CCCeeEEEecC
Confidence            45789999999999999999999999  89999999997654321                        13466789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC--------cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  200 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  200 (388)
                      +|.++++++++       ++|++|||||.......        ..+...+++++.+++|+.++.++++++...     +.
T Consensus        58 ~d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~  125 (253)
T 1xq6_A           58 TDADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GV  125 (253)
T ss_dssp             TSHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TC
T ss_pred             CCHHHHHHHHc-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-----CC
Confidence            99998887765       58999999997531110        011222345578899999999988877543     35


Q ss_pred             cEEEEecCCCCCCCCCCCch-----hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc--chhhhhh-
Q 016493          201 GHIFNMDGAGSGGSSTPLTA-----VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST--IQNKQMF-  272 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~-----~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~-  272 (388)
                      ++||++||. ++..+.++..     .|+.+|.+++.+++.       .|+++++++||.+.++.......  ....... 
T Consensus       126 ~~iv~~SS~-~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~  197 (253)
T 1xq6_A          126 KHIVVVGSM-GGTNPDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ  197 (253)
T ss_dssp             SEEEEEEET-TTTCTTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGG
T ss_pred             CEEEEEcCc-cCCCCCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcC
Confidence            789999987 3443333333     366699999887752       68999999999999885321110  0000010 


Q ss_pred             -hhhccCHHHHHHHHhhhhhh
Q 016493          273 -NIICELPETVARTLVPRIRV  292 (388)
Q Consensus       273 -~~~~~~pe~vA~~~l~~~~~  292 (388)
                       ......++++|+.++..+..
T Consensus       198 ~~~~~~~~~Dva~~~~~~~~~  218 (253)
T 1xq6_A          198 TDTKTVPRADVAEVCIQALLF  218 (253)
T ss_dssp             SSCCEEEHHHHHHHHHHHTTC
T ss_pred             CCCcEEcHHHHHHHHHHHHcC
Confidence             01123577787777765543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.83  E-value=2.5e-19  Score=176.31  Aligned_cols=184  Identities=11%  Similarity=0.041  Sum_probs=136.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH-------------HHHHHHHHhhhhhhcCCCCccc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT-------------VTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~-------------~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      .-.++.+||||||+|.||.+++++|+++|++|++++|+.......             .+.+.+....            
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------   74 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL------------   74 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH------------
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc------------
Confidence            345789999999999999999999999999999999875432110             1111110000            


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  195 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  195 (388)
                       .+.++.++.+|++|.++++++++..     ++|+||||||...  ......++++++..+++|+.++.++++++.+.  
T Consensus        75 -~~~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~--~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~--  144 (404)
T 1i24_A           75 -TGKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF--  144 (404)
T ss_dssp             -HCCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             -cCCceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCCCC--ccchhhCccchhhhHHHHHHHHHHHHHHHHHh--
Confidence             1246788999999999999888765     6999999999753  12223367778889999999999999988654  


Q ss_pred             cCCCCcEEEEecCCCCCCC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 016493          196 DQPKGGHIFNMDGAGSGGS------------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  251 (388)
Q Consensus       196 ~~~~~g~Iv~isS~~~~~~------------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~  251 (388)
                        +...++|++||.. .+.                        +..+...|+.||.+.+.+++.++.++   |+++++|+
T Consensus       145 --~~~~~~V~~SS~~-vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivr  218 (404)
T 1i24_A          145 --GEECHLVKLGTMG-EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLN  218 (404)
T ss_dssp             --CTTCEEEEECCGG-GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEE
T ss_pred             --CCCcEEEEeCcHH-HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEe
Confidence              1124899999863 211                        22345689999999999999998887   79999999


Q ss_pred             cCccccccc
Q 016493          252 PGMVLTDLL  260 (388)
Q Consensus       252 PG~v~T~~~  260 (388)
                      ||.|.+|..
T Consensus       219 p~~v~Gp~~  227 (404)
T 1i24_A          219 QGVVYGVKT  227 (404)
T ss_dssp             ECEEECSCC
T ss_pred             cceeeCCCC
Confidence            999988753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.83  E-value=5.3e-20  Score=168.60  Aligned_cols=177  Identities=11%  Similarity=0.077  Sum_probs=121.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ..|+++||||+||||++++++|+++| ++|++++|+++++++.                       ....+.++++|++|
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~Dl~d   78 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----------------------YPTNSQIIMGDVLN   78 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-----------------------CCTTEEEEECCTTC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-----------------------ccCCcEEEEecCCC
Confidence            45899999999999999999999999 8999999998754321                       22468889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      +++++++++       ++|+||||+|...         .              ...++.+++.|+++ +.++||++||. 
T Consensus        79 ~~~~~~~~~-------~~D~vv~~a~~~~---------~--------------~~~~~~~~~~~~~~-~~~~iV~iSS~-  126 (236)
T 3qvo_A           79 HAALKQAMQ-------GQDIVYANLTGED---------L--------------DIQANSVIAAMKAC-DVKRLIFVLSL-  126 (236)
T ss_dssp             HHHHHHHHT-------TCSEEEEECCSTT---------H--------------HHHHHHHHHHHHHT-TCCEEEEECCC-
T ss_pred             HHHHHHHhc-------CCCEEEEcCCCCc---------h--------------hHHHHHHHHHHHHc-CCCEEEEEecc-
Confidence            999888775       6899999998521         0              13356788888887 46899999997 


Q ss_pred             CCCCCCCCc-------------hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhcc
Q 016493          211 SGGSSTPLT-------------AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  277 (388)
Q Consensus       211 ~~~~~~~~~-------------~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  277 (388)
                      +...+.+..             ..|..+|           .++.+.||++++|+||.+.|+...................
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~i  195 (236)
T 3qvo_A          127 GIYDEVPGKFVEWNNAVIGEPLKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIV  195 (236)
T ss_dssp             CC----------------CGGGHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCEEECTTSCCSCSEE
T ss_pred             eecCCCCcccccchhhcccchHHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceEEeccCCCCCCcEE
Confidence            343333321             2233332           2344679999999999999875432111111100001123


Q ss_pred             CHHHHHHHHhhhhhhcc
Q 016493          278 LPETVARTLVPRIRVVK  294 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~  294 (388)
                      .++++|+.++..+..+.
T Consensus       196 ~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          196 SRKSVAALITDIIDKPE  212 (236)
T ss_dssp             EHHHHHHHHHHHHHSTT
T ss_pred             CHHHHHHHHHHHHcCcc
Confidence            68999998887776554

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.83  E-value=6.5e-20  Score=174.95  Aligned_cols=167  Identities=18%  Similarity=0.149  Sum_probs=132.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ..+.+++|||||+|+||++++++|+++|++|++++|+.+. +.                          .++.++.+|++
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------------------l~~~~~~~Dl~   61 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------------------PNVEMISLDIM   61 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------------------TTEEEEECCTT
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------------------ceeeEEECCCC
Confidence            3456899999999999999999999999999999998643 10                          03678899999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++.     +++|+||||||....     +.+.++++..+++|+.++.++++++ +.+.   +.+++|++||.
T Consensus        62 d~~~~~~~~~~-----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~---~~~~iv~~SS~  127 (321)
T 2pk3_A           62 DSQRVKKVISD-----IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN---LDCRILTIGSS  127 (321)
T ss_dssp             CHHHHHHHHHH-----HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT---CCCEEEEEEEG
T ss_pred             CHHHHHHHHHh-----cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC---CCCeEEEEccH
Confidence            99999988875     379999999997431     1122357889999999999999998 6552   35799999987


Q ss_pred             CCCCCC-------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          210 GSGGSS-------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       210 ~~~~~~-------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                       +.+..             .++...|+.||.+.+.+++.++.++   |++++.++||.+.+|...
T Consensus       128 -~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          128 -EEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             -GGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             -HhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCC
Confidence             32221             2456789999999999999999875   799999999999988643

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.82  E-value=7.4e-20  Score=165.44  Aligned_cols=180  Identities=18%  Similarity=0.179  Sum_probs=137.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC-HHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE-PAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~-~~~  133 (388)
                      +++||||+|+||++++++|+++|++|++++|+++++++                         ..++.++++|++| .++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------------------~~~~~~~~~D~~d~~~~   56 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------------------------YNNVKAVHFDVDWTPEE   56 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------------------------CTTEEEEECCTTSCHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------------------------cCCceEEEecccCCHHH
Confidence            59999999999999999999999999999999765321                         1458899999999 888


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++       ++|+||||||...             ...+++|+.++.++++++.    +. +.+++|++||. ++.
T Consensus        57 ~~~~~~-------~~d~vi~~ag~~~-------------~~~~~~n~~~~~~l~~a~~----~~-~~~~iv~~SS~-~~~  110 (219)
T 3dqp_A           57 MAKQLH-------GMDAIINVSGSGG-------------KSLLKVDLYGAVKLMQAAE----KA-EVKRFILLSTI-FSL  110 (219)
T ss_dssp             HHTTTT-------TCSEEEECCCCTT-------------SSCCCCCCHHHHHHHHHHH----HT-TCCEEEEECCT-TTT
T ss_pred             HHHHHc-------CCCEEEECCcCCC-------------CCcEeEeHHHHHHHHHHHH----Hh-CCCEEEEECcc-ccc
Confidence            876654       6999999999854             1267899999999888773    33 35799999997 455


Q ss_pred             CCCCC-------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          214 SSTPL-------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       214 ~~~~~-------~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      .+.+.       ...|+.+|.+.+.+.+      ...|++++.++||.+.++........ ..  .......++++|+.+
T Consensus       111 ~~~~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~-~~--~~~~~i~~~Dva~~i  181 (219)
T 3dqp_A          111 QPEKWIGAGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI-ND--EVSASNTIGDVADTI  181 (219)
T ss_dssp             CGGGCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-SS--SCCCCEEHHHHHHHH
T ss_pred             CCCcccccccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-CC--CcCCcccHHHHHHHH
Confidence            55444       6789999999998876      35689999999999988754322111 00  111223689999988


Q ss_pred             hhhhhhcc
Q 016493          287 VPRIRVVK  294 (388)
Q Consensus       287 l~~~~~~~  294 (388)
                      +..+..+.
T Consensus       182 ~~~l~~~~  189 (219)
T 3dqp_A          182 KELVMTDH  189 (219)
T ss_dssp             HHHHTCGG
T ss_pred             HHHHhCcc
Confidence            87776543

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.82  E-value=3.6e-20  Score=178.02  Aligned_cols=205  Identities=14%  Similarity=0.091  Sum_probs=144.0

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ....+++++++|||||+|+||++++++|+++|++|++++|+.+...+..+                     .-.++.++.
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------------------~l~~v~~~~   71 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---------------------PVAGLSVIE   71 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC---------------------SCTTEEEEE
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh---------------------ccCCceEEE
Confidence            34567889999999999999999999999999999999997543211000                     003578899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|.++++++++++     ++|+||||||.... .     +.++++  +++|+.++.++++++...     +.++||+
T Consensus        72 ~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~  133 (330)
T 2pzm_A           72 GSVTDAGLLERAFDSF-----KPTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA-----GVKRLLN  133 (330)
T ss_dssp             CCTTCHHHHHHHHHHH-----CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH-----TCSEEEE
T ss_pred             eeCCCHHHHHHHHhhc-----CCCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc-----CCCEEEE
Confidence            9999999999888765     79999999998541 1     345555  999999999999998742     3579999


Q ss_pred             ecCCCCCCCCC-----C------CchhhHHHHHHHHHHHHHHHHHhCCCCeE-EEEEecCcccccccccCccc--hh-hh
Q 016493          206 MDGAGSGGSST-----P------LTAVYGSTKCGLRQLQASLFKESKRSKVG-VHTASPGMVLTDLLLSGSTI--QN-KQ  270 (388)
Q Consensus       206 isS~~~~~~~~-----~------~~~~Y~aSK~al~~l~~~la~el~~~gI~-vn~v~PG~v~T~~~~~~~~~--~~-~~  270 (388)
                      +||. +.....     +      +...|+.||.+.+.+++.+  ++....|| ++.+.||. .|++.......  .. ..
T Consensus       134 ~SS~-~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~  209 (330)
T 2pzm_A          134 FQTA-LCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKC  209 (330)
T ss_dssp             EEEG-GGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTCCC
T ss_pred             ecCH-HHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEE
Confidence            9987 333222     2      5678999999999999877  44444566 67777775 44432110000  00 00


Q ss_pred             hh---hhhccCHHHHHH-HHhhhhhhc
Q 016493          271 MF---NIICELPETVAR-TLVPRIRVV  293 (388)
Q Consensus       271 ~~---~~~~~~pe~vA~-~~l~~~~~~  293 (388)
                      ..   ......++++|+ .++..+..+
T Consensus       210 ~~~~~~~~~i~~~Dva~~a~~~~~~~~  236 (330)
T 2pzm_A          210 FCSDTVRDFLDMSDFLAIADLSLQEGR  236 (330)
T ss_dssp             CEESCEECEEEHHHHHHHHHHHTSTTC
T ss_pred             eCCCCEecceeHHHHHHHHHHHHhhcC
Confidence            00   111246899999 888776553

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.82  E-value=6.6e-20  Score=177.49  Aligned_cols=179  Identities=15%  Similarity=0.042  Sum_probs=135.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++++|+||||+|+||.+++++|+++|++|++++|+.....+..+++.+....            ....++.++.+|+
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~Dl   90 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE------------KQWSNFKFIQGDI   90 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCH------------HHHTTEEEEECCT
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhccc------------ccCCceEEEECCC
Confidence            3456789999999999999999999999999999999764211112222221100            0024688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++       ++|+|||+||....     ..+.++++..+++|+.++.++++++.+.     +.+++|++||
T Consensus        91 ~d~~~~~~~~~-------~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS  153 (352)
T 1sb8_A           91 RNLDDCNNACA-------GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAAS  153 (352)
T ss_dssp             TSHHHHHHHHT-------TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEE
T ss_pred             CCHHHHHHHhc-------CCCEEEECCcccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecc
Confidence            99998887765       69999999997431     1134567889999999999999988652     3578999998


Q ss_pred             CCCCCCCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~~~~-----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .. .+.+.           .+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       154 ~~-~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          154 SS-TYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             GG-GGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTC
T ss_pred             HH-hcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCC
Confidence            63 22222           235689999999999999999886   79999999999998864

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.82  E-value=4.5e-20  Score=171.91  Aligned_cols=180  Identities=16%  Similarity=0.196  Sum_probs=138.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||+|+||++++++|+++|++|++++|++++.                          ....+.++.+|++|+++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dl~d~~~   56 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA--------------------------AEAHEEIVACDLADAQA   56 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC--------------------------CCTTEEECCCCTTCHHH
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc--------------------------cCCCccEEEccCCCHHH
Confidence            6899999999999999999999999999999986431                          01246789999999998


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++       ++|+||||||...         .+++++.+++|+.++.++++++.+    . +.++||++||.. ..
T Consensus        57 ~~~~~~-------~~d~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~iv~~SS~~-~~  114 (267)
T 3ay3_A           57 VHDLVK-------DCDGIIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARN----L-GKPRIVFASSNH-TI  114 (267)
T ss_dssp             HHHHHT-------TCSEEEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHH----T-TCCEEEEEEEGG-GS
T ss_pred             HHHHHc-------CCCEEEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCHH-Hh
Confidence            887765       5899999999742         134578999999999999998864    2 357999999863 22


Q ss_pred             CCCC------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cccccccCccchhhhhhhhhccCHH
Q 016493          214 SSTP------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPE  280 (388)
Q Consensus       214 ~~~~------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe  280 (388)
                      ...+            +...|+.+|.+.+.+++.++.   ..|++++.++||.+ .++..       ....  .....++
T Consensus       115 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~-------~~~~--~~~~~~~  182 (267)
T 3ay3_A          115 GYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKD-------ARMM--ATWLSVD  182 (267)
T ss_dssp             TTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCS-------HHHH--HHBCCHH
T ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCC-------CCee--eccccHH
Confidence            2211            347899999999999988865   34899999999998 45421       1111  1234789


Q ss_pred             HHHHHHhhhhhhc
Q 016493          281 TVARTLVPRIRVV  293 (388)
Q Consensus       281 ~vA~~~l~~~~~~  293 (388)
                      ++|+.++..+..+
T Consensus       183 dva~~~~~~~~~~  195 (267)
T 3ay3_A          183 DFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHhCC
Confidence            9999988777654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.82  E-value=4.9e-19  Score=173.92  Aligned_cols=177  Identities=13%  Similarity=0.035  Sum_probs=132.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChHH---------HHHHHHHHHHHHhhhhhhcCCCCcccccCce--
Q 016493           53 PRNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSES---------VRMTVTELEENLKEGMMAAGGSSKKNLVHAK--  120 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La-~~G~~Vil~~R~~~~---------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--  120 (388)
                      +++||||||+|+||.+++++|+ ++|++|++++|+...         .+.+.+.+.+...        .    ....+  
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~   69 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG--------P----KPPWADR   69 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCS--------S----CCTTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhc--------c----ccccCCc
Confidence            3589999999999999999999 999999999997654         3333222222100        0    00113  


Q ss_pred             -EEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          121 -VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       121 -i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                       +.++.+|++|.+++++++++    ++++|+||||||.... .    .+.++++..+++|+.++.++++++..    . +
T Consensus        70 ~~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~A~~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~  135 (397)
T 1gy8_A           70 YAALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLL----H-K  135 (397)
T ss_dssp             CCEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----T-T
T ss_pred             eEEEEECCCCCHHHHHHHHHh----cCCCCEEEECCCccCc-C----cchhhHHHHHHHHhHHHHHHHHHHHH----h-C
Confidence             78899999999998877653    4569999999997431 1    13456788999999999999988643    3 3


Q ss_pred             CcEEEEecCCCCCCCCCC------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          200 GGHIFNMDGAGSGGSSTP------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~------------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .++||++||. +......                  +...|+.||.+.+.+++.++.++   |+++++++||.+..|.
T Consensus       136 ~~~iv~~SS~-~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          136 CDKIIFSSSA-AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             CCEEEEEEEG-GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             CCEEEEECCH-HHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            5799999986 3222111                  25689999999999999999987   7999999999997663

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.81  E-value=1.4e-19  Score=164.24  Aligned_cols=195  Identities=15%  Similarity=0.114  Sum_probs=140.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .++++||||+|+||++++++|+++|++|++++|++++++.                        ....+.++.+|++|.+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------------------~~~~~~~~~~Dl~d~~   59 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI------------------------ENEHLKVKKADVSSLD   59 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC------------------------CCTTEEEECCCTTCHH
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh------------------------ccCceEEEEecCCCHH
Confidence            3789999999999999999999999999999999765321                        1246889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++       ++|++|||||....       .    ...+++|+.++.++++++..    . +.+++|++||. +.
T Consensus        60 ~~~~~~~-------~~d~vi~~a~~~~~-------~----~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~-~~  115 (227)
T 3dhn_A           60 EVCEVCK-------GADAVISAFNPGWN-------N----PDIYDETIKVYLTIIDGVKK----A-GVNRFLMVGGA-GS  115 (227)
T ss_dssp             HHHHHHT-------TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHHH----T-TCSEEEEECCS-TT
T ss_pred             HHHHHhc-------CCCEEEEeCcCCCC-------C----hhHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCh-hh
Confidence            9888765       58999999986421       1    12678899998888877644    3 34689999987 33


Q ss_pred             CCCC----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh--h---hhhhcc
Q 016493          213 GSST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ--M---FNIICE  277 (388)
Q Consensus       213 ~~~~----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~---~~~~~~  277 (388)
                      ..+.          .+...|+.+|.+.+.+.+.++.   ..|++++.++||.+.+|............  .   ......
T Consensus       116 ~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i  192 (227)
T 3dhn_A          116 LFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHI  192 (227)
T ss_dssp             SEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEE
T ss_pred             ccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEE
Confidence            3222          2357899999999988887765   35899999999999877533211100000  0   001123


Q ss_pred             CHHHHHHHHhhhhhhcccccc
Q 016493          278 LPETVARTLVPRIRVVKGSGK  298 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~~~~~  298 (388)
                      ..+++|+.++..+..++..++
T Consensus       193 ~~~Dva~ai~~~l~~~~~~g~  213 (227)
T 3dhn_A          193 SVEDYAAAMIDELEHPKHHQE  213 (227)
T ss_dssp             EHHHHHHHHHHHHHSCCCCSE
T ss_pred             eHHHHHHHHHHHHhCccccCc
Confidence            689999999988877665444

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.81  E-value=6.7e-20  Score=177.71  Aligned_cols=174  Identities=13%  Similarity=0.168  Sum_probs=135.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           55 NVVITGSTRGLGKALAREFLLS-GDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +||||||+|+||.+++++|+++ |++|++++|+..  ..+.+ +++.                  ...++.++.+|++|.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~------------------~~~~~~~~~~Dl~d~   62 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS------------------ESNRYNFEHADICDS   62 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT------------------TCTTEEEEECCTTCH
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh------------------cCCCeEEEECCCCCH
Confidence            4999999999999999999998 799999998652  11111 0000                  124688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC----CCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~----~~g~Iv~is  207 (388)
                      +++++++++.     ++|+||||||...     .+.+.++++..+++|+.++.++++++.+.|...+    ++++||++|
T Consensus        63 ~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~S  132 (361)
T 1kew_A           63 AEITRIFEQY-----QPDAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS  132 (361)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEE
T ss_pred             HHHHHHHhhc-----CCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeC
Confidence            9999888753     7999999999743     1223456788999999999999999999886421    135999999


Q ss_pred             CCCC-CCC-------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          208 GAGS-GGS-------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       208 S~~~-~~~-------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      |... +..                   +.++...|+.||.+.+.+++.++.++   |++++.++||.|.+|..
T Consensus       133 S~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          133 TDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             EGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             CHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCC
Confidence            8521 211                   22456789999999999999999887   79999999999999864

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.81  E-value=7.5e-20  Score=175.62  Aligned_cols=170  Identities=14%  Similarity=0.108  Sum_probs=132.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++|+||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++.                  ...++.++.+|+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~------------------~~~~~~~~~~Dl   63 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE------------------DDPRYTFVKGDV   63 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT------------------TCTTEEEEECCT
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc------------------cCCceEEEEcCC
Confidence            4679999999999999999999997  89999998642  11110 0000                  124688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++++++       +++|+||||||...     .+.+.++++..+++|+.++.++++++.+.   . ..++||++||
T Consensus        64 ~d~~~~~~~~-------~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS  127 (336)
T 2hun_A           64 ADYELVKELV-------RKVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE---N-PEVRFVHVST  127 (336)
T ss_dssp             TCHHHHHHHH-------HTCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH---C-TTSEEEEEEE
T ss_pred             CCHHHHHHHh-------hCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCcEEEEecc
Confidence            9999888776       27999999999743     12234567889999999999999999876   1 2479999998


Q ss_pred             CCC-CCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGS-GGS---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~-~~~---------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ... +..         +.++...|+.||.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       128 ~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          128 DEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             GGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTC
T ss_pred             HHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCC
Confidence            621 111         33456789999999999999999886   79999999999998864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.81  E-value=1.4e-18  Score=154.59  Aligned_cols=185  Identities=14%  Similarity=0.026  Sum_probs=130.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++++||||+|+||++++++|+++|++|++++|++++++..                       ...++.++.+|++|++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~D~~~~~   59 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------------------GPRPAHVVVGDVLQAA   59 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------------------SCCCSEEEESCTTSHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----------------------cCCceEEEEecCCCHH
Confidence            47899999999999999999999999999999997653210                       1246788999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++       ++|++|||||....    .+.        .++|+.++.++++++..    . +.+++|++||. +.
T Consensus        60 ~~~~~~~-------~~d~vi~~a~~~~~----~~~--------~~~n~~~~~~~~~~~~~----~-~~~~~v~~Ss~-~~  114 (206)
T 1hdo_A           60 DVDKTVA-------GQDAVIVLLGTRND----LSP--------TTVMSEGARNIVAAMKA----H-GVDKVVACTSA-FL  114 (206)
T ss_dssp             HHHHHHT-------TCSEEEECCCCTTC----CSC--------CCHHHHHHHHHHHHHHH----H-TCCEEEEECCG-GG
T ss_pred             HHHHHHc-------CCCEEEECccCCCC----CCc--------cchHHHHHHHHHHHHHH----h-CCCeEEEEeee-ee
Confidence            8877664       58999999997541    111        13777888777777654    2 35689999987 33


Q ss_pred             CCCCC----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          213 GSSTP----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       213 ~~~~~----~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      ....+    ....|+.+|.+++.+.+.       .|++++.++||.+ .++.......... .........++++|+.++
T Consensus       115 ~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~-~~~~~~~i~~~Dva~~~~  186 (206)
T 1hdo_A          115 LWDPTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVTLD-GRGPSRVISKHDLGHFML  186 (206)
T ss_dssp             TSCTTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEESS-SCSSCSEEEHHHHHHHHH
T ss_pred             ccCcccccccchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEeccc-CCCCCCccCHHHHHHHHH
Confidence            33333    567899999999988742       5899999999998 4443211110000 000012236888888887


Q ss_pred             hhhhhc
Q 016493          288 PRIRVV  293 (388)
Q Consensus       288 ~~~~~~  293 (388)
                      ..+..+
T Consensus       187 ~~~~~~  192 (206)
T 1hdo_A          187 RCLTTD  192 (206)
T ss_dssp             HTTSCS
T ss_pred             HHhcCc
Confidence            766543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.80  E-value=1.2e-19  Score=174.81  Aligned_cols=177  Identities=14%  Similarity=0.138  Sum_probs=135.0

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccC
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSG-------DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH  118 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G-------~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~  118 (388)
                      ++++.+++++|+||||+|+||.+++++|+++|       ++|++++|+.++..+                       ...
T Consensus         7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----------------------~~~   63 (342)
T 2hrz_A            7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----------------------GFS   63 (342)
T ss_dssp             CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----------------------TCC
T ss_pred             CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----------------------ccC
Confidence            34567789999999999999999999999999       899999997643210                       023


Q ss_pred             ceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 016493          119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  198 (388)
Q Consensus       119 ~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  198 (388)
                      .++.++.+|++|.++++++++      +++|+||||||...      ..+.+++++.+++|+.++.++++++.+...+++
T Consensus        64 ~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~  131 (342)
T 2hrz_A           64 GAVDARAADLSAPGEAEKLVE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDG  131 (342)
T ss_dssp             SEEEEEECCTTSTTHHHHHHH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHC
T ss_pred             CceeEEEcCCCCHHHHHHHHh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence            568889999999999887765      37999999999743      123567889999999999999999887543221


Q ss_pred             CCcEEEEecCCCCCCCCC-C----------CchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEe--cCccccc
Q 016493          199 KGGHIFNMDGAGSGGSST-P----------LTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTAS--PGMVLTD  258 (388)
Q Consensus       199 ~~g~Iv~isS~~~~~~~~-~----------~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~--PG~v~T~  258 (388)
                      ..++||++||. +.+.+. +          +...|+.||.+.+.+++.++.+..  ...+|++.|.  ||.+.++
T Consensus       132 ~~~~iv~~SS~-~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          132 YKPRVVFTSSI-AVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             CCCEEEEEEEG-GGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred             CCcEEEEeCch-HhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence            24789999987 333221 1          457899999999999998887642  2346777777  8876543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.80  E-value=7.7e-19  Score=168.86  Aligned_cols=206  Identities=13%  Similarity=0.113  Sum_probs=141.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .++|+||||||+|+||.+++++|+++|++|+++.|+.+..++.. .+.+ ...             ...++.++.+|++|
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~-------------~~~~~~~~~~Dl~d   67 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLD-LPK-------------AETHLTLWKADLAD   67 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHT-STT-------------HHHHEEEEECCTTS
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHh-ccc-------------CCCeEEEEEcCCCC
Confidence            46899999999999999999999999999999999876543221 1111 000             01357889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .++++++++       ++|+|||+|+...    ....  +..+..+++|+.++.++++++.+..    ..++||++||..
T Consensus        68 ~~~~~~~~~-------~~d~Vih~A~~~~----~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~  130 (337)
T 2c29_D           68 EGSFDEAIK-------GCTGVFHVATPMD----FESK--DPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAG  130 (337)
T ss_dssp             TTTTHHHHT-------TCSEEEECCCCCC----SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGG
T ss_pred             HHHHHHHHc-------CCCEEEEeccccC----CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHh
Confidence            988877664       5899999998632    1222  2335789999999999999987642    246899999873


Q ss_pred             CCCCCC----------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchh
Q 016493          211 SGGSST----------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN  268 (388)
Q Consensus       211 ~~~~~~----------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~  268 (388)
                      + ..+.                      +....|+.||.+.+.+++.++.+.   |+++++++||.|.+|..........
T Consensus       131 ~-~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~  206 (337)
T 2c29_D          131 T-VNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMPPSL  206 (337)
T ss_dssp             G-TSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCCHHH
T ss_pred             h-cccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchH
Confidence            2 2110                      123369999999999887776554   7999999999999986432211000


Q ss_pred             -h---------hhhh----hhccCHHHHHHHHhhhhhh
Q 016493          269 -K---------QMFN----IICELPETVARTLVPRIRV  292 (388)
Q Consensus       269 -~---------~~~~----~~~~~pe~vA~~~l~~~~~  292 (388)
                       .         ....    .....++++|+.++..+..
T Consensus       207 ~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  244 (337)
T 2c29_D          207 ITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFEN  244 (337)
T ss_dssp             HHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcC
Confidence             0         0000    0134689999988876654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.80  E-value=6.1e-19  Score=170.06  Aligned_cols=172  Identities=16%  Similarity=0.079  Sum_probs=130.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH------HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~------l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +|+++||||+|+||.+++++|+++|++|++++|+...      ..+..+++.+.                .+.++.++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~   65 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL----------------TGRSVEFEEM   65 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH----------------HTCCCEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc----------------cCCceEEEEC
Confidence            4789999999999999999999999999999885432      22222333221                1246788999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++++..     ++|+||||||.... .    .+.+++++.+++|+.++.++++++.    +. +.+++|++
T Consensus        66 D~~~~~~~~~~~~~~-----~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~iv~~  130 (348)
T 1ek6_A           66 DILDQGALQRLFKKY-----SFMAVIHFAGLKAV-G----ESVQKPLDYYRVNLTGTIQLLEIMK----AH-GVKNLVFS  130 (348)
T ss_dssp             CTTCHHHHHHHHHHC-----CEEEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHH----HT-TCCEEEEE
T ss_pred             CCCCHHHHHHHHHhc-----CCCEEEECCCCcCc-c----chhhchHHHHHHHHHHHHHHHHHHH----Hh-CCCEEEEE
Confidence            999999988877652     79999999997431 1    1345678899999999999988653    33 35799999


Q ss_pred             cCCCCCCC-----------C-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          207 DGAGSGGS-----------S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       207 sS~~~~~~-----------~-~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ||.. .+.           + .|....|+.||.+.+.+++.++.+  ..++++..++|+.+-.|
T Consensus       131 SS~~-~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          131 SSAT-VYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             EEGG-GGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             CcHH-HhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence            9863 221           1 122678999999999999999987  34699999999988765

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.79  E-value=1.2e-18  Score=169.60  Aligned_cols=174  Identities=13%  Similarity=0.027  Sum_probs=123.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|+++||||+|+||++++++|+++|++|++++|+.++.. +..+++.+...             ..+.++.++.+|++|.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~Dl~d~   67 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH-------------TCNPKFHLHYGDLSDT   67 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------------------CCEEECCCCSSCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccc-------------cCCCceEEEECCCCCH
Confidence            478999999999999999999999999999999865421 11111111000             0124688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++.+     ++|++|||||....     ..+.++++..+++|+.++.++++++.+.+.+  +.+++|++||.. 
T Consensus        68 ~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~iv~~SS~~-  134 (372)
T 1db3_A           68 SNLTRILREV-----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSE-  134 (372)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGG-
T ss_pred             HHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCChh-
Confidence            9999988765     69999999997541     2234456889999999999999998775432  247999999862 


Q ss_pred             CCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 016493          212 GGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV  255 (388)
Q Consensus       212 ~~~~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v  255 (388)
                      .+..           ..+...|+.||.+.+.+++.++.++   ++.+..+.|..+
T Consensus       135 v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~  186 (372)
T 1db3_A          135 LYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNH  186 (372)
T ss_dssp             GGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             hhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCc
Confidence            2211           2335689999999999999999886   455555555443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.79  E-value=5.5e-19  Score=168.43  Aligned_cols=204  Identities=14%  Similarity=0.104  Sum_probs=133.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ||+||||||+|+||++++++|+++|++|+++.| +++..+.. ..+.+ ...             ...++.++.+|++|.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~-------------~~~~~~~~~~Dl~d~   65 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTN-LPG-------------ASEKLHFFNADLSNP   65 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHT-STT-------------HHHHEEECCCCTTCG
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHh-hhc-------------cCCceEEEecCCCCH
Confidence            689999999999999999999999999999998 65321110 11110 000             013578889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       ++|+|||+|+..    ..  ...+.+++.+++|+.++.++++++.+.    .+.++||++||.. 
T Consensus        66 ~~~~~~~~-------~~d~vih~A~~~----~~--~~~~~~~~~~~~nv~gt~~l~~aa~~~----~~~~~iV~~SS~~-  127 (322)
T 2p4h_X           66 DSFAAAIE-------GCVGIFHTASPI----DF--AVSEPEEIVTKRTVDGALGILKACVNS----KTVKRFIYTSSGS-  127 (322)
T ss_dssp             GGGHHHHT-------TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC----SSCCEEEEEEEGG-
T ss_pred             HHHHHHHc-------CCCEEEEcCCcc----cC--CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccHH-
Confidence            98887765       589999999642    11  111224568999999999999988653    1347999999873 


Q ss_pred             CCCCCC----------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh
Q 016493          212 GGSSTP----------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK  269 (388)
Q Consensus       212 ~~~~~~----------------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  269 (388)
                      +..+.+                      ....|+.||.+.+.+++.++.+   .|+++++++||.|.+|...........
T Consensus       128 ~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~  204 (322)
T 2p4h_X          128 AVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIE  204 (322)
T ss_dssp             GTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHH
T ss_pred             HcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHH
Confidence            221111                      1116999999777766655443   489999999999999864321110000


Q ss_pred             h----hh------h---hhccCHHHHHHHHhhhhhh
Q 016493          270 Q----MF------N---IICELPETVARTLVPRIRV  292 (388)
Q Consensus       270 ~----~~------~---~~~~~pe~vA~~~l~~~~~  292 (388)
                      .    ..      .   .-...++++|+.++..+..
T Consensus       205 ~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~  240 (322)
T 2p4h_X          205 KALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN  240 (322)
T ss_dssp             HHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhC
Confidence            0    00      0   0124689999998877654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.79  E-value=3.4e-18  Score=153.89  Aligned_cols=189  Identities=13%  Similarity=0.146  Sum_probs=126.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +|+||||+|+||++++++|+++|++|++++|+++++++.                       . ..+.++.+|++|.++ 
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------------------~-~~~~~~~~D~~d~~~-   56 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----------------------H-KDINILQKDIFDLTL-   56 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-----------------------C-SSSEEEECCGGGCCH-
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-----------------------c-CCCeEEeccccChhh-
Confidence            599999999999999999999999999999998765432                       1 357889999999887 


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                              +.+.++|++|||||...  .            ..++|+    ..++.+++.+++. +.+++|++||. ++..
T Consensus        57 --------~~~~~~d~vi~~ag~~~--~------------~~~~~~----~~~~~l~~a~~~~-~~~~~v~~SS~-~~~~  108 (221)
T 3ew7_A           57 --------SDLSDQNVVVDAYGISP--D------------EAEKHV----TSLDHLISVLNGT-VSPRLLVVGGA-ASLQ  108 (221)
T ss_dssp             --------HHHTTCSEEEECCCSST--T------------TTTSHH----HHHHHHHHHHCSC-CSSEEEEECCC-C---
T ss_pred             --------hhhcCCCEEEECCcCCc--c------------ccchHH----HHHHHHHHHHHhc-CCceEEEEecc-eEEE
Confidence                    22357999999999843  1            022344    4456667777776 46899999987 3332


Q ss_pred             CCC------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-hhhhh----hhhhcc
Q 016493          215 STP------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQM----FNIICE  277 (388)
Q Consensus       215 ~~~------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~----~~~~~~  277 (388)
                      +.+            +...|+.+|.+.+.+. .+..  ...|++++.|+||.+.++........ .....    ......
T Consensus       109 ~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i  185 (221)
T 3ew7_A          109 IDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFI  185 (221)
T ss_dssp             ----------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------CC
T ss_pred             cCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceE
Confidence            222            2356999999888762 2322  15689999999999988721111000 00000    001234


Q ss_pred             CHHHHHHHHhhhhhhccccccc
Q 016493          278 LPETVARTLVPRIRVVKGSGKA  299 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~~~~~~  299 (388)
                      .++++|+.++..+..++..++.
T Consensus       186 ~~~Dva~~~~~~l~~~~~~g~~  207 (221)
T 3ew7_A          186 SMEDYAIAVLDEIERPNHLNEH  207 (221)
T ss_dssp             CHHHHHHHHHHHHHSCSCTTSE
T ss_pred             eHHHHHHHHHHHHhCccccCCE
Confidence            6899999999888877655543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.79  E-value=7.4e-19  Score=169.81  Aligned_cols=179  Identities=12%  Similarity=0.044  Sum_probs=137.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+||||||+|+||.+++++|+++|++|++++|+.....+....+.......            ...++.++.+|+
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl   88 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE------------QWSRFCFIEGDI   88 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH------------HHTTEEEEECCT
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc------------cCCceEEEEccC
Confidence            45678999999999999999999999999999999997665444444443311100            014688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++.++++       ++|++||+||....     ..+.++.+..+++|+.++.++++++..    . +.+++|++||
T Consensus        89 ~d~~~~~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~v~~SS  151 (351)
T 3ruf_A           89 RDLTTCEQVMK-------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKN----A-QVQSFTYAAS  151 (351)
T ss_dssp             TCHHHHHHHTT-------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEE
T ss_pred             CCHHHHHHHhc-------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEec
Confidence            99998877665       69999999997431     223455678999999999999888754    2 3468999998


Q ss_pred             CCCCCCCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~~~~-----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .. .+...           .+...|+.+|.+.+.+++.++.+.   |++++.++||.+-.|..
T Consensus       152 ~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          152 SS-TYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             GG-GGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTC
T ss_pred             HH-hcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCC
Confidence            62 22211           224689999999999999998887   79999999999987753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.79  E-value=3.4e-18  Score=154.52  Aligned_cols=189  Identities=12%  Similarity=0.071  Sum_probs=130.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||++++++|+++|++|++++|++++++++                       ....+.++.+|++|.++ 
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~D~~d~~~-   57 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-----------------------LGATVATLVKEPLVLTE-   57 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------------------TCTTSEEEECCGGGCCH-
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-----------------------cCCCceEEecccccccH-
Confidence            499999999999999999999999999999998775432                       12457889999999887 


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                              +.++++|+||||||.... .   .        ..++|+.++    +.+++.+++. + +++|++||.+ +..
T Consensus        58 --------~~~~~~d~vi~~ag~~~~-~---~--------~~~~n~~~~----~~l~~a~~~~-~-~~~v~~SS~~-~~~  110 (224)
T 3h2s_A           58 --------ADLDSVDAVVDALSVPWG-S---G--------RGYLHLDFA----THLVSLLRNS-D-TLAVFILGSA-SLA  110 (224)
T ss_dssp             --------HHHTTCSEEEECCCCCTT-S---S--------CTHHHHHHH----HHHHHTCTTC-C-CEEEEECCGG-GSB
T ss_pred             --------hhcccCCEEEECCccCCC-c---c--------hhhHHHHHH----HHHHHHHHHc-C-CcEEEEecce-eec
Confidence                    223579999999998521 1   0        023465554    5556667766 3 8999999863 333


Q ss_pred             CCCC--------------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh----hhhhhc
Q 016493          215 STPL--------------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ----MFNIIC  276 (388)
Q Consensus       215 ~~~~--------------~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~  276 (388)
                      +.+.              ...|+.+|.+.+.+    .......|++++.|+||.+.++............    ......
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  186 (224)
T 3h2s_A          111 MPGADHPMILDFPESAASQPWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSH  186 (224)
T ss_dssp             CTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCB
T ss_pred             cCCCCccccccCCCCCccchhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccCceecccccccCCCCCce
Confidence            2222              56899999988744    2233467899999999999987322110000000    001122


Q ss_pred             cCHHHHHHHHhhhhhhcccccc
Q 016493          277 ELPETVARTLVPRIRVVKGSGK  298 (388)
Q Consensus       277 ~~pe~vA~~~l~~~~~~~~~~~  298 (388)
                      ..++++|+.++..+..++..++
T Consensus       187 i~~~DvA~~~~~~l~~~~~~g~  208 (224)
T 3h2s_A          187 ITTGNMALAILDQLEHPTAIRD  208 (224)
T ss_dssp             CCHHHHHHHHHHHHHSCCCTTS
T ss_pred             EeHHHHHHHHHHHhcCccccCC
Confidence            4789999999988876655443

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.78  E-value=1.4e-18  Score=167.11  Aligned_cols=194  Identities=17%  Similarity=0.143  Sum_probs=137.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .+|+||||+|+||.+++++|+++|++|++++|+.++.++    +                   ...++.++.+|++|.++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l-------------------~~~~~~~~~~Dl~d~~~   70 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----L-------------------AYLEPECRVAEMLDHAG   70 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----G-------------------GGGCCEEEECCTTCHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----h-------------------ccCCeEEEEecCCCHHH
Confidence            379999999999999999999999999999998765321    1                   11357889999999988


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++       ++|+|||+||...       .+.+++++.+++|+.++.++++++.+.     +.+++|++||. +..
T Consensus        71 ~~~~~~-------~~d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~-~~~  130 (342)
T 2x4g_A           71 LERALR-------GLDGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSA-YAM  130 (342)
T ss_dssp             HHHHTT-------TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCG-GGS
T ss_pred             HHHHHc-------CCCEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCH-Hhh
Confidence            877664       6999999999642       234567889999999999999998774     34689999987 333


Q ss_pred             CCCCC----------------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc-ccCccchhhhh-hh--
Q 016493          214 SSTPL----------------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQM-FN--  273 (388)
Q Consensus       214 ~~~~~----------------~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~-~~~~~~~~~~~-~~--  273 (388)
                      ...+.                ...|+.+|.+.+.+++.++.   . |++++.++||.+.+|.. ........... ..  
T Consensus       131 ~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~  206 (342)
T 2x4g_A          131 PRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEM  206 (342)
T ss_dssp             CCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCC
T ss_pred             CcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCC
Confidence            32222                66899999999999998886   3 79999999999998864 21111000000 00  


Q ss_pred             -------hhccCHHHHHHHHhhhhhhcc
Q 016493          274 -------IICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       274 -------~~~~~pe~vA~~~l~~~~~~~  294 (388)
                             .....++++|+.++..+..+.
T Consensus       207 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~  234 (342)
T 2x4g_A          207 THYVAGQRNVIDAAEAGRGLLMALERGR  234 (342)
T ss_dssp             CEEECCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             ccccCCCcceeeHHHHHHHHHHHHhCCC
Confidence                   012368899998887776543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.78  E-value=1.4e-18  Score=169.99  Aligned_cols=160  Identities=14%  Similarity=0.084  Sum_probs=123.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-----HHHHHHHHHHHHhhhhhhcCCCCcccccCc-eEEEEEcc
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHA-KVAGIACD  127 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~D  127 (388)
                      |+||||||+|+||.+++++|+++|++|++++|+.++     ++.+.+++..                 .+. ++.++.+|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~D   91 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-----------------VNKALMKLHYAD   91 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-------------------------CCEEEEECC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc-----------------ccccceEEEECC
Confidence            789999999999999999999999999999998653     2111111100                 112 68889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.+++.++++.+     ++|+||||||....     ..+.++++..+++|+.++.++++++.+.+.++++.+++|++|
T Consensus        92 l~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~S  161 (381)
T 1n7h_A           92 LTDASSLRRWIDVI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  161 (381)
T ss_dssp             TTCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             CCCHHHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeC
Confidence            99999999888765     79999999997431     123456789999999999999999999876543457999999


Q ss_pred             CCCCCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 016493          208 GAGSGGS----------STPLTAVYGSTKCGLRQLQASLFKESK  241 (388)
Q Consensus       208 S~~~~~~----------~~~~~~~Y~aSK~al~~l~~~la~el~  241 (388)
                      |.. .+.          +..+...|+.+|.+.+.+++.++.++.
T Consensus       162 S~~-vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          162 SSE-MFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             EGG-GGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cHH-HhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence            863 211          234467899999999999999998873

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.78  E-value=1.2e-18  Score=173.38  Aligned_cols=178  Identities=16%  Similarity=0.135  Sum_probs=128.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH---HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      .+..+|+||||||+|+||.+++++|+++|++|++++|+.+   .++.+.+.+.+...+.        .......++.++.
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~--------~~~~~~~~v~~v~  136 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEE--------TVEMMLSNIEVIV  136 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHH--------HHHHHHTTEEEEE
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhcccc--------ccccccCceEEEe
Confidence            3456789999999999999999999999999999999987   3444444443321000        0000135789999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|++++.        .++++|+||||||...        ..++++..+++|+.++.++++++.+      +..++|+
T Consensus       137 ~Dl~d~~~l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~------~~~~~v~  194 (427)
T 4f6c_A          137 GDFECMDDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIY  194 (427)
T ss_dssp             ECC---CCCC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH------TTCEEEE
T ss_pred             CCCCCcccCC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh------cCCcEEE
Confidence            9999988876        4568999999999743        2356788999999999999999876      2468999


Q ss_pred             ecCCCCCCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          206 MDGAGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       206 isS~~~~~~-----------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      +||...+..                 +......|+.||.+.+.+++.++.    .|++++.++||.|-++..
T Consensus       195 ~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~  262 (427)
T 4f6c_A          195 VSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYN  262 (427)
T ss_dssp             EEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSS
T ss_pred             ECchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCC
Confidence            998743110                 122567899999999999988753    589999999999988754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=2e-18  Score=168.56  Aligned_cols=173  Identities=13%  Similarity=0.003  Sum_probs=129.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-----HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||||+|+||.+++++|+++|++|++++|+.++     ++.+.+++..                ....++.++.+|+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~----------------~~~~~~~~~~~Dl   88 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA----------------HIEGNMKLHYGDL   88 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-------------------------CEEEEECCT
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhcc----------------ccCCCceEEEccC
Confidence            789999999999999999999999999999998643     1111110000                0124688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++.++++.+     ++|+||||||....     ..+.++++..+++|+.++.++++++.+...+  +.++||++||
T Consensus        89 ~d~~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~~~~iv~~SS  156 (375)
T 1t2a_A           89 TDSTCLVKIINEV-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQAST  156 (375)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred             CCHHHHHHHHHhc-----CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--ccceEEEecc
Confidence            9999999888765     69999999997431     1234567889999999999999998775432  2379999998


Q ss_pred             CCCCCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          209 AGSGGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       209 ~~~~~~-----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      .. .+.           +..+...|+.||.+.+.+++.++.++   ++.+..+.|+.+..|
T Consensus       157 ~~-~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          157 SE-LYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  213 (375)
T ss_dssp             GG-GTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             hh-hhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCC
Confidence            63 222           12245689999999999999999876   577777877665544

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.78  E-value=6e-19  Score=167.71  Aligned_cols=165  Identities=14%  Similarity=0.115  Sum_probs=127.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||++++++|+++|++|++++|+.....+   .                    ...++.++.+|++|++++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~--------------------~~~~~~~~~~Dl~~~~~~   58 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---N--------------------VPKGVPFFRVDLRDKEGV   58 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---G--------------------SCTTCCEECCCTTCHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---h--------------------cccCeEEEECCCCCHHHH
Confidence            59999999999999999999999999999985421100   0                    112466789999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC-CC-C
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GS-G  212 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~-~~-~  212 (388)
                      ++++++.     ++|++||+||...     ...+.++++..+++|+.++.++++++..    . +.+++|++||. .. +
T Consensus        59 ~~~~~~~-----~~d~vi~~a~~~~-----~~~~~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~~~~~g  123 (311)
T 2p5y_A           59 ERAFREF-----RPTHVSHQAAQAS-----VKVSVEDPVLDFEVNLLGGLNLLEACRQ----Y-GVEKLVFASTGGAIYG  123 (311)
T ss_dssp             HHHHHHH-----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEHHHHHC
T ss_pred             HHHHHhc-----CCCEEEECccccC-----chhhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCChhhcC
Confidence            8887642     6899999999743     1123456788999999999999998753    3 35789999986 11 1


Q ss_pred             C----C------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          213 G----S------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       213 ~----~------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .    .      +..+...|+.||.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       124 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          124 EVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             CCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             CCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence            1    0      11245689999999999999999876   79999999999988854

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.78  E-value=1e-18  Score=171.14  Aligned_cols=171  Identities=13%  Similarity=0.017  Sum_probs=133.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..++.++++++||||+|+||.+++++|+++|++|++++|+.++....                       ...++.++.+
T Consensus        23 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------------~~~~v~~~~~   79 (379)
T 2c5a_A           23 QYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----------------------DMFCDEFHLV   79 (379)
T ss_dssp             CSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----------------------GGTCSEEEEC
T ss_pred             ccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----------------------ccCCceEEEC
Confidence            34555778999999999999999999999999999999986542110                       1135778999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++++       ++|++||+||... ....   +.++++..+++|+.++.++++++..    . +.+++|++
T Consensus        80 Dl~d~~~~~~~~~-------~~d~Vih~A~~~~-~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~~V~~  143 (379)
T 2c5a_A           80 DLRVMENCLKVTE-------GVDHVFNLAADMG-GMGF---IQSNHSVIMYNNTMISFNMIEAARI----N-GIKRFFYA  143 (379)
T ss_dssp             CTTSHHHHHHHHT-------TCSEEEECCCCCC-CHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----T-TCSEEEEE
T ss_pred             CCCCHHHHHHHhC-------CCCEEEECceecC-cccc---cccCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEE
Confidence            9999998887764       6999999999743 1111   1235678999999999999998754    2 34689999


Q ss_pred             cCCCCCCC------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          207 DGAGSGGS------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       207 sS~~~~~~------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ||.. .+.                  +..+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       144 SS~~-v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          144 SSAC-IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             EEGG-GSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             eehh-eeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCC
Confidence            9863 221                  22345689999999999999998876   79999999999988753

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.77  E-value=5.4e-19  Score=167.85  Aligned_cols=193  Identities=15%  Similarity=0.068  Sum_probs=141.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++|+||||+|+||.+++++|+++|++|++++|+.+...+.                       ....+.++.+|++|.+ 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~Dl~d~~-   56 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-----------------------VNPSAELHVRDLKDYS-   56 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-----------------------SCTTSEEECCCTTSTT-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-----------------------cCCCceEEECccccHH-
Confidence            4799999999999999999999999999999976542211                       1245788999999987 


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +.++++       . |++||+||...     ...+.++++..+++|+.++.++++++...     +.+++|++||.. .+
T Consensus        57 ~~~~~~-------~-d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~-vy  117 (312)
T 3ko8_A           57 WGAGIK-------G-DVVFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT-----GVRTVVFASSST-VY  117 (312)
T ss_dssp             TTTTCC-------C-SEEEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGG-GG
T ss_pred             HHhhcC-------C-CEEEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeCcHH-Hh
Confidence            554332       3 99999999643     23345567889999999999999988542     356899999862 22


Q ss_pred             -----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc-chhhhh-h--h-----
Q 016493          214 -----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST-IQNKQM-F--N-----  273 (388)
Q Consensus       214 -----------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~-~--~-----  273 (388)
                                 .+..+...|+.||.+.+.+++.++.++   |++++.++||.+.+|....... ...... .  .     
T Consensus       118 g~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  194 (312)
T 3ko8_A          118 GDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVL  194 (312)
T ss_dssp             CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEc
Confidence                       123345789999999999999999987   7999999999999886432110 000000 0  0     


Q ss_pred             ------hhccCHHHHHHHHhhhhhh
Q 016493          274 ------IICELPETVARTLVPRIRV  292 (388)
Q Consensus       274 ------~~~~~pe~vA~~~l~~~~~  292 (388)
                            .-....+++|+.++..+..
T Consensus       195 ~~g~~~~~~i~v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          195 GDGTQRKSYLYVRDAVEATLAAWKK  219 (312)
T ss_dssp             ----CEECEEEHHHHHHHHHHHHHH
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHHh
Confidence                  0112478999998877765

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.77  E-value=2.5e-18  Score=165.72  Aligned_cols=168  Identities=15%  Similarity=0.182  Sum_probs=129.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      |+|+||||+|+||.+++++|+++  |++|++++|+......  +.+.+                ....++.++.+|++|.
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~~~~----------------~~~~~~~~~~~Dl~d~   66 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEA----------------ILGDRVELVVGDIADA   66 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGTGG----------------GCSSSEEEEECCTTCH
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh--hHHhh----------------hccCCeEEEECCCCCH
Confidence            78999999999999999999999  8999999997531100  00000                0124688899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       .+|+||||||...     .+.+.++++..+++|+.++.++++++.+.     + +++|++||...
T Consensus        67 ~~~~~~~~-------~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~-~~~v~~SS~~v  128 (348)
T 1oc2_A           67 ELVDKLAA-------KADAIVHYAAESH-----NDNSLNDPSPFIHTNFIGTYTLLEAARKY-----D-IRFHHVSTDEV  128 (348)
T ss_dssp             HHHHHHHT-------TCSEEEECCSCCC-----HHHHHHCCHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGGG
T ss_pred             HHHHHHhh-------cCCEEEECCcccC-----ccchhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEecccce
Confidence            98877765       4699999999743     12234566889999999999999999875     2 38999998621


Q ss_pred             -CCC---------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          212 -GGS---------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       212 -~~~---------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                       +..                     +.++...|+.||.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       129 yg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          129 YGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             GCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTC
T ss_pred             eCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCC
Confidence             111                     23345789999999999999999887   79999999999998864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.77  E-value=3.9e-18  Score=164.50  Aligned_cols=159  Identities=10%  Similarity=0.043  Sum_probs=123.9

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      .+..+.++|+||||||+|+||.+++++|+++|++|++++|+.++                             .++.++.
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------------------~~~~~~~   62 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------------------TGGEEVV   62 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------------------SCCSEEE
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------------------CCccEEe
Confidence            34567788999999999999999999999999999999998643                             2466789


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|.+++.++++       ++|++||+||...       .+.+.++..+++|+.++.++++++..    . +.+++|+
T Consensus        63 ~Dl~d~~~~~~~~~-------~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~V~  123 (347)
T 4id9_A           63 GSLEDGQALSDAIM-------GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA----A-GVRRFVF  123 (347)
T ss_dssp             SCTTCHHHHHHHHT-------TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEE
T ss_pred             cCcCCHHHHHHHHh-------CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEE
Confidence            99999998887665       7999999999743       23344589999999999999888754    3 3569999


Q ss_pred             ecCCCCCCC-------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 016493          206 MDGAGSGGS-------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  256 (388)
Q Consensus       206 isS~~~~~~-------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~  256 (388)
                      +||.. .+.             +..+...|+.+|.+.+.+++.++.+.   |++++.++|+.+.
T Consensus       124 ~SS~~-vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~  183 (347)
T 4id9_A          124 ASSGE-VYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQ  183 (347)
T ss_dssp             EEEGG-GTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred             ECCHH-HhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEe
Confidence            99852 221             22355789999999999999988874   7999999999987

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.77  E-value=1.5e-18  Score=168.63  Aligned_cols=176  Identities=20%  Similarity=0.141  Sum_probs=124.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHH--CCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLL--SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~--~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +++++|+||||||+|+||.+++++|++  +|++|++++|+.......... .+         .........+.++.++.+
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~   75 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNR-PS---------SLGHFKNLIGFKGEVIAA   75 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC--------CC---------CCCCGGGGTTCCSEEEEC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccc-hh---------hhhhhhhccccCceEEEC
Confidence            567899999999999999999999999  999999999976521110000 00         000011112346789999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.++++++      ...++|+||||||...       .+.++++..+++|+.++.++++++..    .  ++++|++
T Consensus        76 Dl~d~~~~~~~------~~~~~D~vih~A~~~~-------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~  136 (362)
T 3sxp_A           76 DINNPLDLRRL------EKLHFDYLFHQAAVSD-------TTMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYA  136 (362)
T ss_dssp             CTTCHHHHHHH------TTSCCSEEEECCCCCG-------GGCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEE
T ss_pred             CCCCHHHHHHh------hccCCCEEEECCccCC-------ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEe
Confidence            99999998876      2358999999999643       13345788999999999999998833    2  3459999


Q ss_pred             cCCCCCCCC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          207 DGAGSGGSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       207 sS~~~~~~~----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ||. +.+..          ..+...|+.||.+.+.+++.++.+     +++..+.|+.+-.|.
T Consensus       137 SS~-~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~  193 (362)
T 3sxp_A          137 SSA-GVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPR  193 (362)
T ss_dssp             EEG-GGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTT
T ss_pred             CcH-HHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcC
Confidence            985 22211          122356999999999999887766     556667776665543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.77  E-value=6e-18  Score=162.53  Aligned_cols=168  Identities=16%  Similarity=0.130  Sum_probs=123.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||++++++|+++|++|++++|......+..+++.+.                .+.++.++.+|++|++++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~~~~~   65 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALM   65 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh----------------cCCcceEEEccCCCHHHH
Confidence            6999999999999999999999999999987432211112222221                123577889999999998


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++..     ++|+||||||... ..    ...++.++.+++|+.++.++++++..    . +.++||++||.. .+.
T Consensus        66 ~~~~~~~-----~~D~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~iv~~SS~~-~~g  129 (338)
T 1udb_A           66 TEILHDH-----AIDTVIHFAGLKA-VG----ESVQKPLEYYDNNVNGTLRLISAMRA----A-NVKNFIFSSSAT-VYG  129 (338)
T ss_dssp             HHHHHHT-----TCSEEEECCSCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEEEEGG-GGC
T ss_pred             HHHhhcc-----CCCEEEECCccCc-cc----cchhcHHHHHHHHHHHHHHHHHHHHh----c-CCCeEEEEccHH-HhC
Confidence            8877642     6999999999743 11    12344577899999999999886533    2 357899999863 221


Q ss_pred             -----------CC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 016493          215 -----------ST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  256 (388)
Q Consensus       215 -----------~~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~  256 (388)
                                 +. +....|+.||++.+.+++.++.+.  .|+++..+.|+.+-
T Consensus       130 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~  181 (338)
T 1udb_A          130 DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV  181 (338)
T ss_dssp             SCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEE
T ss_pred             CCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceec
Confidence                       11 236789999999999999999875  36899888886654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.76  E-value=2.7e-18  Score=163.32  Aligned_cols=160  Identities=15%  Similarity=0.144  Sum_probs=123.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+||||||+|+||.+++++|+++|+.|++..|+....+.                        ....+.++.+|++| ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~------------------------~~~~~~~~~~Dl~~-~~   56 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF------------------------VNEAARLVKADLAA-DD   56 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG------------------------SCTTEEEECCCTTT-SC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh------------------------cCCCcEEEECcCCh-HH
Confidence            579999999999999999999999555555444332110                        12458889999999 87


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +.++++       ++|++||+||...     .+.+.++++..+++|+.++.++++++..    . +.+++|++||.. .+
T Consensus        57 ~~~~~~-------~~d~vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~iv~~SS~~-vy  118 (313)
T 3ehe_A           57 IKDYLK-------GAEEVWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRK----A-GVSRIVFTSTST-VY  118 (313)
T ss_dssp             CHHHHT-------TCSEEEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEECCGG-GG
T ss_pred             HHHHhc-------CCCEEEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeCchH-Hh
Confidence            776654       7999999998632     2344556788999999999999888543    2 357999999863 22


Q ss_pred             -----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          214 -----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       214 -----------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                                 .+..+...|+.||.+.+.+++.++.++   |++++.+.|+.+.+|.
T Consensus       119 g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~  172 (313)
T 3ehe_A          119 GEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRR  172 (313)
T ss_dssp             CSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTT
T ss_pred             CcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcC
Confidence                       133456789999999999999999887   7999999999998774

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.76  E-value=2.5e-18  Score=165.71  Aligned_cols=210  Identities=10%  Similarity=0.053  Sum_probs=141.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++.++++|+||||+|+||.+++++|+++|  ++|+..+|+.....  ...+...               ....++.++.+
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~---------------~~~~~~~~~~~   82 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSI---------------QDHPNYYFVKG   82 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTT---------------TTCTTEEEEEC
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhh---------------ccCCCeEEEEc
Confidence            45678999999999999999999999999  67888877642110  0011000               01257889999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.+++.++++..     ++|+|||+||....     ....++.+..+++|+.++.++++++...     +.+++|++
T Consensus        83 Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~  147 (346)
T 4egb_A           83 EIQNGELLEHVIKER-----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQV  147 (346)
T ss_dssp             CTTCHHHHHHHHHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEE
T ss_pred             CCCCHHHHHHHHhhc-----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEe
Confidence            999999999988764     69999999998541     2244667889999999999998887542     35689999


Q ss_pred             cCCCCCCCCC------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc--chhhhh-
Q 016493          207 DGAGSGGSST------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST--IQNKQM-  271 (388)
Q Consensus       207 sS~~~~~~~~------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~-  271 (388)
                      ||. +.+...            .+...|+.+|.+.+.+++.++.+.   |++++.++||.+..|.......  ...... 
T Consensus       148 SS~-~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  223 (346)
T 4egb_A          148 STD-EVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNAL  223 (346)
T ss_dssp             EEG-GGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHH
T ss_pred             Cch-HHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHH
Confidence            986 222211            234679999999999999998876   7999999999998875321110  000000 


Q ss_pred             h----hh--------hccCHHHHHHHHhhhhhhcc
Q 016493          272 F----NI--------ICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       272 ~----~~--------~~~~pe~vA~~~l~~~~~~~  294 (388)
                      .    ..        -....+++|+.++..+..+.
T Consensus       224 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  258 (346)
T 4egb_A          224 EGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR  258 (346)
T ss_dssp             TTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             cCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC
Confidence            0    00        01247899999887776554

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.76  E-value=4.9e-18  Score=162.86  Aligned_cols=174  Identities=14%  Similarity=-0.008  Sum_probs=128.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ...+++||||||+|+||.+++++|+++|++|++++|+.++...  ..+... .              ...++.++.+|++
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~-~--------------~~~~~~~~~~Dl~   73 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLREL-G--------------IEGDIQYEDGDMA   73 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHT-T--------------CGGGEEEEECCTT
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhc-c--------------ccCceEEEECCCC
Confidence            4567899999999999999999999999999999998654210  011110 0              1246888999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.++++++++.+     ++|++||+||....     ..+.++++..+++|+.++.++++++.+.    +..+++|++||.
T Consensus        74 d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~  139 (335)
T 1rpn_A           74 DACSVQRAVIKA-----QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTS  139 (335)
T ss_dssp             CHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEG
T ss_pred             CHHHHHHHHHHc-----CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCH
Confidence            999999888765     79999999997431     1112346789999999999999988654    113689999986


Q ss_pred             CCCCCCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          210 GSGGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       210 ~~~~~~~-----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                       +.+...           .+...|+.||.+.+.+++.++.++   ++.+..+.|+.+..|
T Consensus       140 -~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          140 -EMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESP  195 (335)
T ss_dssp             -GGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECT
T ss_pred             -HHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCC
Confidence             222111           224579999999999999998876   577888888877655

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.76  E-value=5.7e-18  Score=162.06  Aligned_cols=164  Identities=15%  Similarity=0.089  Sum_probs=128.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||+|+||.+++++|+++|++|++++|+.....   +.                    ...++.++.+|++|.++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~--------------------~~~~~~~~~~D~~~~~~   58 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA--------------------ITEGAKFYNGDLRDKAF   58 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG--------------------SCTTSEEEECCTTCHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh--------------------cCCCcEEEECCCCCHHH
Confidence            68999999999999999999999999999998754321   00                    11257789999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +++++++     .++|++||+||....     ..+.++++..+++|+.++.++++++..    . +.+++|++||.. .+
T Consensus        59 ~~~~~~~-----~~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~-~~  122 (330)
T 2c20_A           59 LRDVFTQ-----ENIEAVMHFAADSLV-----GVSMEKPLQYYNNNVYGALCLLEVMDE----F-KVDKFIFSSTAA-TY  122 (330)
T ss_dssp             HHHHHHH-----SCEEEEEECCCCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGG-GG
T ss_pred             HHHHHhh-----cCCCEEEECCcccCc-----cccccCHHHHHHHHhHHHHHHHHHHHH----c-CCCEEEEeCCce-ee
Confidence            8887764     379999999997431     113456788999999999999888643    3 357899999863 22


Q ss_pred             C-----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          214 S-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       214 ~-----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .           +..+...|+.+|.+.+.+++.++.++   |++++.++||.+..|.
T Consensus       123 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          123 GEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             CSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred             CCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence            1           11235789999999999999988765   7999999999987763

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.76  E-value=3.9e-18  Score=163.94  Aligned_cols=198  Identities=20%  Similarity=0.155  Sum_probs=134.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..+++++++||||+|+||.+++++|+++|++|++++|+.+...+   .+.                  .-.++.++.+|+
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~------------------~~~~~~~~~~Dl   75 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLK------------------DHPNLTFVEGSI   75 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSC------------------CCTTEEEEECCT
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHh------------------hcCCceEEEEeC
Confidence            34678999999999999999999999999999999997542110   000                  003578899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++.     +++|+||||||.... .     +.++++  +++|+.++.++++++.+    . +.++||++||
T Consensus        76 ~d~~~~~~~~~~-----~~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~----~-~~~~iV~~SS  137 (333)
T 2q1w_A           76 ADHALVNQLIGD-----LQPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKK----N-NVGRFVYFQT  137 (333)
T ss_dssp             TCHHHHHHHHHH-----HCCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHH----T-TCSEEEEEEE
T ss_pred             CCHHHHHHHHhc-----cCCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHH----h-CCCEEEEECc
Confidence            999999888775     279999999998541 1     334444  99999999999999876    2 3579999998


Q ss_pred             CCCCCC----CC--------CCc-hhhHHHHHHHHHHHHH-HHHHhCCCCeEEEEEecCcccccccccCc-cch-----h
Q 016493          209 AGSGGS----ST--------PLT-AVYGSTKCGLRQLQAS-LFKESKRSKVGVHTASPGMVLTDLLLSGS-TIQ-----N  268 (388)
Q Consensus       209 ~~~~~~----~~--------~~~-~~Y~aSK~al~~l~~~-la~el~~~gI~vn~v~PG~v~T~~~~~~~-~~~-----~  268 (388)
                      . +.+.    ..        .+. ..|+.+|.+.+.+++. ++        ++..+.|+.+-.|...... ...     .
T Consensus       138 ~-~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~  208 (333)
T 2q1w_A          138 A-LCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPIFFQRLSE  208 (333)
T ss_dssp             G-GGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHHHHHHHHT
T ss_pred             H-HHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHHHHHHHHc
Confidence            6 3322    11        223 7899999999999887 54        4556777666554310000 000     0


Q ss_pred             h-hhh----hhhccCHHHHHHHHhhhhhhcc
Q 016493          269 K-QMF----NIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       269 ~-~~~----~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                      . ...    ......++++|+.++..+..+.
T Consensus       209 ~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~  239 (333)
T 2q1w_A          209 GKKCFVTKARRDFVFVKDLARATVRAVDGVG  239 (333)
T ss_dssp             TCCCEEEECEECEEEHHHHHHHHHHHHTTCC
T ss_pred             CCeeeCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence            0 000    0112358999999887776543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.75  E-value=7e-18  Score=162.04  Aligned_cols=169  Identities=13%  Similarity=0.167  Sum_probs=128.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC---C---CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           55 NVVITGSTRGLGKALAREFLLS---G---DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~---G---~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++||||+|+||.+++++|+++   |   ++|++++|+......  +.+.+ ..              ...++.++.+|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~--~~~~~-~~--------------~~~~~~~~~~Dl   64 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAP-VD--------------ADPRLRFVHGDI   64 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGG-GT--------------TCTTEEEEECCT
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch--hhhhh-cc--------------cCCCeEEEEcCC
Confidence            5999999999999999999997   8   999999986421000  00000 00              124688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++++++       .++|++||+||....     +.+.++++..+++|+.++.++++++.+.     +.+++|++||
T Consensus        65 ~d~~~~~~~~-------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~SS  127 (337)
T 1r6d_A           65 RDAGLLAREL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVST  127 (337)
T ss_dssp             TCHHHHHHHT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEE
T ss_pred             CCHHHHHHHh-------cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecc
Confidence            9998887765       479999999997431     1233556789999999999999998764     2468999998


Q ss_pred             CCC-CCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGS-GGS---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~-~~~---------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ... +..         +..+...|+.||.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       128 ~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          128 NQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             GGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             hHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCC
Confidence            521 111         23456789999999999999999876   69999999999988764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.74  E-value=1.3e-18  Score=156.15  Aligned_cols=184  Identities=16%  Similarity=0.133  Sum_probs=132.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+++++||||+|+||++++++|+++|+  +|++++|++++                           ...++.++.+|++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------------------------~~~~~~~~~~D~~   56 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------------------------EHPRLDNPVGPLA   56 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------------------------CCTTEECCBSCHH
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------------------------cCCCceEEecccc
Confidence            468999999999999999999999998  99999998753                           0135777899999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |++++++++         +|++|||||....       +.+++++.+++|+.++.++++++.+    . +.+++|++||.
T Consensus        57 ~~~~~~~~~---------~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~  115 (215)
T 2a35_A           57 ELLPQLDGS---------IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSAL  115 (215)
T ss_dssp             HHGGGCCSC---------CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCT
T ss_pred             CHHHHHHhh---------hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHH----c-CCCEEEEECCc
Confidence            887665443         8999999997431       2345788899999999999888754    2 35689999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeE-EEEEecCcccccccccCc-cchh---hhhh--hhhccCHHHH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG-VHTASPGMVLTDLLLSGS-TIQN---KQMF--NIICELPETV  282 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~-vn~v~PG~v~T~~~~~~~-~~~~---~~~~--~~~~~~pe~v  282 (388)
                       ....  ++...|+.+|.+++.+++.       .|++ ++.++||.+.+|...... ....   ....  ......++++
T Consensus       116 -~~~~--~~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  185 (215)
T 2a35_A          116 -GADA--KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDL  185 (215)
T ss_dssp             -TCCT--TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHH
T ss_pred             -ccCC--CCccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHH
Confidence             3332  2356899999999988764       3798 999999999987532100 0000   0000  0111246777


Q ss_pred             HHHHhhhhhhc
Q 016493          283 ARTLVPRIRVV  293 (388)
Q Consensus       283 A~~~l~~~~~~  293 (388)
                      |+.++..+..+
T Consensus       186 a~~~~~~~~~~  196 (215)
T 2a35_A          186 ARALWRLALEE  196 (215)
T ss_dssp             HHHHHHHHTCC
T ss_pred             HHHHHHHHhcC
Confidence            87777666544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.74  E-value=1.5e-17  Score=162.57  Aligned_cols=171  Identities=15%  Similarity=0.059  Sum_probs=130.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++++|+||||+|+||.+++++|+++| ++|++++|+.++..+   .+.                  ...++.++.+|+
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~------------------~~~~v~~~~~Dl   87 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP------------------DHPAVRFSETSI   87 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC------------------CCTTEEEECSCT
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc------------------CCCceEEEECCC
Confidence            4678999999999999999999999999 999999998653210   000                  124688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++       ++|+|||+||....     ..+.++++..+++|+.++.++++++.    +.++.+++|++||
T Consensus        88 ~d~~~l~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS  151 (377)
T 2q1s_A           88 TDDALLASLQD-------EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAA  151 (377)
T ss_dssp             TCHHHHHHCCS-------CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEE
T ss_pred             CCHHHHHHHhh-------CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCC
Confidence            99988776554       79999999997431     12345678899999999999988873    2212468999998


Q ss_pred             CCCC-----------CC----CC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSG-----------GS----ST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~-----------~~----~~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ....           ..    +. .+...|+.+|.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       152 ~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          152 GCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             C--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             HHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence            6210           00    22 345689999999999999998876   79999999999988754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.73  E-value=8e-18  Score=159.64  Aligned_cols=162  Identities=12%  Similarity=0.026  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +|+++||||+|+||.+++++|+++  |++|++++|+..+.+     +.                    .++.++.+|++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~--------------------~~~~~~~~D~~d   56 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV--------------------NSGPFEVVNALD   56 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH--------------------HSSCEEECCTTC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc--------------------CCCceEEecCCC
Confidence            478999999999999999999999  899999999865421     11                    135678999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .+++++++++.     ++|++||+||....      ...++.+..+++|+.++.++++++.+    . +.+++|++||..
T Consensus        57 ~~~~~~~~~~~-----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~  120 (312)
T 2yy7_A           57 FNQIEHLVEVH-----KITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKA----K-KIKKIFWPSSIA  120 (312)
T ss_dssp             HHHHHHHHHHT-----TCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHT----T-SCSEEECCEEGG
T ss_pred             HHHHHHHHhhc-----CCCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEeccHH
Confidence            99998887653     69999999997431      12355788999999999999888754    2 356899999863


Q ss_pred             CCCCC------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          211 SGGSS------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       211 ~~~~~------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                       .+..            ..+...|+.+|.+.+.+++.++.++   |++++.++||.+-.+.
T Consensus       121 -~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          121 -VFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             -GCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred             -HhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence             2221            1235689999999999999998776   7999999999987753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.73  E-value=2.9e-17  Score=173.39  Aligned_cols=177  Identities=18%  Similarity=0.182  Sum_probs=129.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++|+|+||||+|+||++++++|+++|++|++++|+.....+..+++...                ...++.++.+|+
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~v~~v~~Dl   70 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL----------------TKHHIPFYEVDL   70 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH----------------HTSCCCEEECCT
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc----------------cCCceEEEEcCC
Confidence            4567899999999999999999999999999999999765433222333221                124577899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++..     ++|+||||||... ...    ..+..++.+++|+.++.++++++..    . +.++||++||
T Consensus        71 ~d~~~l~~~~~~~-----~~D~Vih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~-~~~~iV~~SS  135 (699)
T 1z45_A           71 CDRKGLEKVFKEY-----KIDSVIHFAGLKA-VGE----STQIPLRYYHNNILGTVVLLELMQQ----Y-NVSKFVFSSS  135 (699)
T ss_dssp             TCHHHHHHHHHHS-----CCCEEEECCSCCC-HHH----HHHSHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEEEE
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCcccC-cCc----cccCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEECc
Confidence            9999998877643     7999999999743 111    1233467899999999998776543    2 3578999998


Q ss_pred             CCCCCC---------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          209 AGSGGS---------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       209 ~~~~~~---------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      .. ...               +..+...|+.||.+.+.+++.++.+. ..|+++..++|+.+-.+
T Consensus       136 ~~-vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          136 AT-VYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             GG-GGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             HH-HhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence            63 211               11234689999999999999998875 45899999999877544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.73  E-value=2e-18  Score=165.90  Aligned_cols=173  Identities=13%  Similarity=0.142  Sum_probs=121.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+||||||+|+||++++++|+++|++|+++.|+.++.++.. .+... .              ...++.++++|++|.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-~~~~~-~--------------~~~~~~~~~~Dl~d~~   72 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-HLLEL-Q--------------ELGDLKIFRADLTDEL   72 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-HHHHH-G--------------GGSCEEEEECCTTTSS
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-HHHhc-C--------------CCCcEEEEecCCCChH
Confidence            689999999999999999999999999999999865432111 11110 0              1135788999999998


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++       ++|+|||+||...    ..  ..+..++.+++|+.|+.++++++.+..    +.++||++||..+.
T Consensus        73 ~~~~~~~-------~~D~Vih~A~~~~----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~r~V~~SS~~~~  135 (338)
T 2rh8_A           73 SFEAPIA-------GCDFVFHVATPVH----FA--SEDPENDMIKPAIQGVVNVMKACTRAK----SVKRVILTSSAAAV  135 (338)
T ss_dssp             SSHHHHT-------TCSEEEEESSCCC----C-----------CHHHHHHHHHHHHHHHHCT----TCCEEEEECCHHHH
T ss_pred             HHHHHHc-------CCCEEEEeCCccC----CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC----CcCEEEEEecHHHe
Confidence            8877654       5899999998632    11  112234589999999999999886532    24689999986310


Q ss_pred             -----CC---CC------------C---CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          213 -----GS---ST------------P---LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       213 -----~~---~~------------~---~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                           ..   +.            +   ....|+.||.+.+.+++.++.+.   |+++++++||.|.+|...
T Consensus       136 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          136 TINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             HHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSS
T ss_pred             ecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence                 00   00            0   11259999999888887776553   799999999999998643

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.73  E-value=2.1e-17  Score=158.84  Aligned_cols=163  Identities=11%  Similarity=0.031  Sum_probs=124.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH-
Q 016493           54 RNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP-  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~-  131 (388)
                      ++++||||+|+||.+++++|+++ |++|++++|+.++.++..                      ...++.++.+|++|. 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------------------~~~~~~~~~~D~~~~~   58 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDISIHS   58 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------------------TCTTEEEEECCTTTCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----------------------cCCCeEEEeccccCcH
Confidence            47999999999999999999998 899999999876543210                      124688899999984 


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +.++++++       ++|++||+||...+ .    ...++.+..+++|+.++.++++++..    . + +++|++||.. 
T Consensus        59 ~~~~~~~~-------~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~v~~SS~~-  119 (345)
T 2bll_A           59 EWIEYHVK-------KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPSTSE-  119 (345)
T ss_dssp             HHHHHHHH-------HCSEEEECBCCCCH-H----HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECCGG-
T ss_pred             HHHHhhcc-------CCCEEEEcccccCc-c----chhcCHHHHHHHHHHHHHHHHHHHHH----h-C-CeEEEEecHH-
Confidence            55666554       47999999997431 1    11345678999999999998888754    3 3 7899999862 


Q ss_pred             CCCCC------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          212 GGSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       212 ~~~~~------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .+...                  .+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       120 v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          120 VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             GGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred             HcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCc
Confidence            22111                  112379999999999999998876   79999999999987753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.73  E-value=1.6e-17  Score=161.75  Aligned_cols=166  Identities=11%  Similarity=0.056  Sum_probs=128.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++.+|+|+||||+|+||.+++++|+++ |++|++++|+.++.+...                      ...++.++.+|
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------------------~~~~v~~~~~D   77 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----------------------KHERMHFFEGD   77 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----------------------GSTTEEEEECC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----------------------cCCCeEEEeCc
Confidence            3467899999999999999999999998 999999999876543211                      12468899999


Q ss_pred             CC-CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          128 VC-EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       128 ls-~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      ++ |.+++.++++       ++|+|||+||...+     ....++.+..+++|+.++.++++++...     + .++|++
T Consensus        78 l~~d~~~~~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~v~~  139 (372)
T 3slg_A           78 ITINKEWVEYHVK-------KCDVILPLVAIATP-----ATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFP  139 (372)
T ss_dssp             TTTCHHHHHHHHH-------HCSEEEECBCCCCH-----HHHHHCHHHHHHHHTTTTHHHHHHHHHH-----T-CEEEEE
T ss_pred             cCCCHHHHHHHhc-------cCCEEEEcCccccH-----HHHhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEe
Confidence            99 9998888776       58999999997541     1123456788999999999998887543     2 689999


Q ss_pred             cCCCCCCCCC------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          207 DGAGSGGSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       207 sS~~~~~~~~------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ||. +.+...                  .+...|+.+|.+.+.+++.++.+    |++++.++|+.+-.|.
T Consensus       140 SS~-~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~  205 (372)
T 3slg_A          140 STS-EVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPG  205 (372)
T ss_dssp             CCG-GGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSS
T ss_pred             CcH-HHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCC
Confidence            986 222110                  23347999999999999888765    7999999999997765

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.73  E-value=4.1e-18  Score=165.15  Aligned_cols=167  Identities=13%  Similarity=0.119  Sum_probs=124.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++++|+||||+|+||.+++++|+++| ++|++++|+.....  ...+                     ..+. +.+|+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---------------------~~~~-~~~d~   98 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---------------------VDLN-IADYM   98 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---------------------TTSC-CSEEE
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---------------------cCce-Eeeec
Confidence            4567899999999999999999999999 99999999765321  0000                     0112 67899


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+.++++++.  ..++++|+|||+||... .      +.++++..+++|+.++.++++++.+.     +. ++|++||
T Consensus        99 ~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS  163 (357)
T 2x6t_A           99 DKEDFLIQIMAG--EEFGDVEAIFHEGACSS-T------TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASS  163 (357)
T ss_dssp             EHHHHHHHHHTT--CCCSSCCEEEECCSCCC-T------TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEE
T ss_pred             CcHHHHHHHHhh--cccCCCCEEEECCcccC-C------ccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcc
Confidence            998888877653  23568999999999754 1      22346789999999999999998763     24 8999998


Q ss_pred             CCCCCCCCC-----------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          209 AGSGGSSTP-----------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       209 ~~~~~~~~~-----------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .. .+...+           +...|+.+|.+.+.+++.++.++   |++++.++||.+.+|.
T Consensus       164 ~~-v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          164 AA-TYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             GG-GGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSS
T ss_pred             hH-HhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCC
Confidence            63 222211           25689999999999999888764   7999999999998774

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.73  E-value=1.1e-17  Score=159.20  Aligned_cols=154  Identities=17%  Similarity=0.142  Sum_probs=93.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +|+|+||||+|+||++++++|+++|++|++++|+.++                             .+  ++.+|++|.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------------------~~--~~~~Dl~d~~   50 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------------------PK--FEQVNLLDSN   50 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------------------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------------------CC--eEEecCCCHH
Confidence            5789999999999999999999999999999986532                             01  4678999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++..     ++|++|||||...+     ..+.+++++.+++|+.++.++++++.+.      ++++|++||.. .
T Consensus        51 ~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~-v  113 (315)
T 2ydy_A           51 AVHHIIHDF-----QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDY-V  113 (315)
T ss_dssp             -CHHHHHHH-----CCSEEEECC------------------------CHHHHHHHHHHHHH------TCEEEEEEEGG-G
T ss_pred             HHHHHHHhh-----CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHH-H
Confidence            988888764     79999999997541     2345678899999999999999998763      24899999873 3


Q ss_pred             CCC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccc
Q 016493          213 GSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  257 (388)
Q Consensus       213 ~~~----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T  257 (388)
                      +.+          ..+...|+.+|.+.+.+++.++.++  ..+|++.|. |+..+
T Consensus       114 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          114 FDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEK  165 (315)
T ss_dssp             SCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSS
T ss_pred             cCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCc
Confidence            222          2445789999999999998875433  235555555 54444

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.71  E-value=3.6e-17  Score=152.14  Aligned_cols=183  Identities=14%  Similarity=0.055  Sum_probs=127.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||++++++|+ +|++|++++|+++.                           . ..   +.+|++|++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~---------------------------~-~~---~~~Dl~~~~~~   49 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI---------------------------Q-GG---YKLDLTDFPRL   49 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC---------------------------T-TC---EECCTTSHHHH
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC---------------------------C-CC---ceeccCCHHHH
Confidence            59999999999999999999 58999999998631                           0 01   78999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++..     ++|++|||||....     +.+.+++++.+++|+.++.++++++.+    .  ++++|++||. +...
T Consensus        50 ~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~-~~~~  112 (273)
T 2ggs_A           50 EDFIIKK-----RPDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTD-YVFD  112 (273)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEG-GGSC
T ss_pred             HHHHHhc-----CCCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecc-eeEc
Confidence            9888765     79999999997431     223467889999999999999999864    2  3589999987 3332


Q ss_pred             CCC----------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc--hhhhh---h-hhhccC
Q 016493          215 STP----------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQM---F-NIICEL  278 (388)
Q Consensus       215 ~~~----------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~---~-~~~~~~  278 (388)
                      +.+          +...|+.+|.+++.+++.    +....+|++.|. |  .+++.......  .....   . ......
T Consensus       113 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (273)
T 2ggs_A          113 GEKGNYKEEDIPNPINYYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVFAFKGYYSPIS  185 (273)
T ss_dssp             SSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEEEESCEECCCB
T ss_pred             CCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEEeecCCCCceE
Confidence            221          256899999999999876    333345555555 3  23332110000  00000   0 111246


Q ss_pred             HHHHHHHHhhhhhhc
Q 016493          279 PETVARTLVPRIRVV  293 (388)
Q Consensus       279 pe~vA~~~l~~~~~~  293 (388)
                      ++++|+.++..+..+
T Consensus       186 ~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          186 ARKLASAILELLELR  200 (273)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcC
Confidence            899999988777654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.69  E-value=4.5e-17  Score=156.94  Aligned_cols=167  Identities=18%  Similarity=0.166  Sum_probs=122.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++++|+||||+|+||.+++++|+++|++|++++|+.....+...++.                  ...++.++.+|+
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~D~   84 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI------------------GHENFELINHDV   84 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT------------------TCTTEEEEECCT
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc------------------cCCceEEEeCcc
Confidence            44678999999999999999999999999999999997532111000000                  124588899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      .+..            +.++|+|||+||.... .. ..   ++.+..+++|+.++.++++++...     + .++|++||
T Consensus        85 ~~~~------------~~~~d~vih~A~~~~~-~~-~~---~~~~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS  141 (343)
T 2b69_A           85 VEPL------------YIEVDQIYHLASPASP-PN-YM---YNPIKTLKTNTIGTLNMLGLAKRV-----G-ARLLLAST  141 (343)
T ss_dssp             TSCC------------CCCCSEEEECCSCCSH-HH-HT---TCHHHHHHHHHHHHHHHHHHHHHH-----T-CEEEEEEE
T ss_pred             CChh------------hcCCCEEEECccccCc-hh-hh---hCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEECc
Confidence            8852            3579999999997431 11 11   234678999999999999988653     2 48999998


Q ss_pred             CCCCC----------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGG----------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~----------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .. .+                .+..+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       142 ~~-v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          142 SE-VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             GG-GGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             HH-HhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCC
Confidence            62 22                122345679999999999999988776   79999999999988753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.68  E-value=1.8e-16  Score=150.66  Aligned_cols=155  Identities=15%  Similarity=0.164  Sum_probs=120.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++||||+|+||.+++++|+++  |++|++++|+..+.                            ..+.++.+|++|.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------------------~~~~~~~~D~~d~~   52 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------------------GGIKFITLDVSNRD   52 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------------------TTCCEEECCTTCHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------------------cCceEEEecCCCHH
Confidence            4899999999999999999998  89999999875421                            12456889999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++..     ++|++||+||...   .   ...++.+..+++|+.++.++++++.+    . +.+++|++||.. .
T Consensus        53 ~~~~~~~~~-----~~d~vih~a~~~~---~---~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~SS~~-~  115 (317)
T 3ajr_A           53 EIDRAVEKY-----SIDAIFHLAGILS---A---KGEKDPALAYKVNMNGTYNILEAAKQ----H-RVEKVVIPSTIG-V  115 (317)
T ss_dssp             HHHHHHHHT-----TCCEEEECCCCCH---H---HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGG-G
T ss_pred             HHHHHHhhc-----CCcEEEECCcccC---C---ccccChHHHhhhhhHHHHHHHHHHHH----c-CCCEEEEecCHH-H
Confidence            998887642     7999999999743   1   12345788999999999999998754    2 356899999863 2


Q ss_pred             CCCC------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccc
Q 016493          213 GSST------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  257 (388)
Q Consensus       213 ~~~~------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T  257 (388)
                      ..+.            .+...|+.||.+.+.+++.++.+.   |++++.+.|+.+-.
T Consensus       116 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g  169 (317)
T 3ajr_A          116 FGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIIS  169 (317)
T ss_dssp             CCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred             hCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEec
Confidence            2211            135789999999999999888765   79999998655543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.68  E-value=4e-16  Score=148.57  Aligned_cols=154  Identities=14%  Similarity=0.095  Sum_probs=121.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+++++||||+|+||.+++++|+++|++|++++|+.                                     .+|++|.
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------------------~~D~~d~   44 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------------------ELNLLDS   44 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------------------TCCTTCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------------------cCCccCH
Confidence            357899999999999999999999999999988751                                     2599999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++..     ++|+|||+||... .   .....++.+..+++|+.++.++++++..    . +..++|++||.. 
T Consensus        45 ~~~~~~~~~~-----~~d~vih~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~-  109 (321)
T 1e6u_A           45 RAVHDFFASE-----RIDQVYLAAAKVG-G---IVANNTYPADFIYQNMMIESNIIHAAHQ----N-DVNKLLFLGSSC-  109 (321)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCC-C---HHHHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGG-
T ss_pred             HHHHHHHHhc-----CCCEEEEcCeecC-C---cchhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCeEEEEccHH-
Confidence            9998887754     6999999999743 1   1112345678899999999999888754    2 346899999863 


Q ss_pred             CCC---------------CC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          212 GGS---------------ST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       212 ~~~---------------~~-~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .+.               +. |....|+.+|.+.+.+++.++.+.   |++++.++||.+-.|..
T Consensus       110 vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          110 IYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             GSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             HcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence            221               11 113589999999999999998776   79999999999987754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.67  E-value=1.5e-16  Score=160.75  Aligned_cols=184  Identities=21%  Similarity=0.246  Sum_probs=127.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHC---CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLS---GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~---G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ...++|+|+||||+|+||.+++++|+++   |++|++++|+.+..+. .+++.+........ ...........++.++.
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDA-RRRLEKTFDSGDPE-LLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHH-HHHHHGGGCSSCHH-HHHHHHHHHTTTEEEEE
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHH-HHHHHHHHHhcchh-hhhhhhhhccCceEEEE
Confidence            3467899999999999999999999999   9999999998765432 23332211100000 00000000125799999


Q ss_pred             ccCC------CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 016493          126 CDVC------EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  199 (388)
Q Consensus       126 ~Dls------~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  199 (388)
                      +|++      |.++++++++       ++|+||||||... .        +.++..+++|+.++.++++++..    . +
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~-~--------~~~~~~~~~Nv~gt~~ll~aa~~----~-~  205 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN-A--------FPYHELFGPNVAGTAELIRIALT----T-K  205 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS-B--------SSCCEEHHHHHHHHHHHHHHHTS----S-S
T ss_pred             eECCCcccCCCHHHHHHHHc-------CCCEEEECccccC-C--------cCHHHHHHHHHHHHHHHHHHHHh----C-C
Confidence            9999      5556666554       5899999999854 1        22356789999999999887643    2 3


Q ss_pred             CcEEEEecCCCCCCCCCC---------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          200 GGHIFNMDGAGSGGSSTP---------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~---------------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ..++|++||........+                     ....|+.||.+.+.+++.++.+.   |++++.++||.|-.+
T Consensus       206 ~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          206 LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD  282 (478)
T ss_dssp             CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred             CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence            458999998522111000                     01349999999999999988766   799999999999765

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.67  E-value=3.9e-16  Score=148.28  Aligned_cols=189  Identities=13%  Similarity=0.066  Sum_probs=135.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++||||+|+||.+++++|+++|++|++++|++...+     +                     .++.++.+|++ .++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~---------------------~~~~~~~~Dl~-~~~   55 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I---------------------NDYEYRVSDYT-LED   55 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------------------CCEEEECCCC-HHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C---------------------CceEEEEcccc-HHH
Confidence            78999999999999999999999999999999843321     1                     14778999999 888


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +.++++       ++|++||+||.... .        +.+..+++|+.++.++++++..    . +..++|++||. +.+
T Consensus        56 ~~~~~~-------~~d~Vih~a~~~~~-~--------~~~~~~~~n~~~~~~ll~a~~~----~-~~~r~v~~SS~-~vy  113 (311)
T 3m2p_A           56 LINQLN-------DVDAVVHLAATRGS-Q--------GKISEFHDNEILTQNLYDACYE----N-NISNIVYASTI-SAY  113 (311)
T ss_dssp             HHHHTT-------TCSEEEECCCCCCS-S--------SCGGGTHHHHHHHHHHHHHHHH----T-TCCEEEEEEEG-GGC
T ss_pred             HHHhhc-------CCCEEEEccccCCC-C--------ChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEccH-HHh
Confidence            877664       79999999998542 1        3456788999999988888743    3 35689999985 222


Q ss_pred             CC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCc--cchhhhh---------
Q 016493          214 SS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS--TIQNKQM---------  271 (388)
Q Consensus       214 ~~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~---------  271 (388)
                      ..           ..+...|+.+|.+.+.+++.++.+.   |++++.+.||.+-.|......  .......         
T Consensus       114 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  190 (311)
T 3m2p_A          114 SDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKK---GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLH  190 (311)
T ss_dssp             CCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHS---CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEES
T ss_pred             CCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEe
Confidence            11           1234689999999999999888753   799999999999876533110  0000000         


Q ss_pred             ----hhhhccCHHHHHHHHhhhhhhcc
Q 016493          272 ----FNIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       272 ----~~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                          ........+++|+.++..+..+.
T Consensus       191 g~~~~~~~~v~v~Dva~a~~~~~~~~~  217 (311)
T 3m2p_A          191 ANSVAKREFLYAKDAAKSVIYALKQEK  217 (311)
T ss_dssp             SBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred             cCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence                00011247799999887776553

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.67  E-value=2.1e-16  Score=165.80  Aligned_cols=166  Identities=11%  Similarity=0.046  Sum_probs=126.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++++|+||||+|+||.+++++|+++ |++|++++|+.++.++..                      ...++.++.+|++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----------------------~~~~v~~v~~Dl~  370 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDIS  370 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----------------------TCTTEEEEECCTT
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----------------------cCCceEEEECCCC
Confidence            46789999999999999999999998 899999999876532110                      1246888999999


Q ss_pred             CHHH-HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          130 EPAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      |.++ ++++++       ++|++|||||...+ .    ...++.+..+++|+.++.++++++..    . + +++|++||
T Consensus       371 d~~~~~~~~~~-------~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~-~r~V~~SS  432 (660)
T 1z7e_A          371 IHSEWIEYHVK-------KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPST  432 (660)
T ss_dssp             TCHHHHHHHHH-------HCSEEEECCCCCCT-H----HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECC
T ss_pred             CcHHHHHHhhc-------CCCEEEECceecCc-c----ccccCHHHHHHhhhHHHHHHHHHHHH----h-C-CEEEEEec
Confidence            9765 555443       58999999997431 1    12345678999999999999888754    3 2 78999998


Q ss_pred             CCCCCCCC------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGGSST------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~~~~------------------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .. .+...                  .+...|+.||.+.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       433 ~~-vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          433 SE-VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             GG-GGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTS
T ss_pred             HH-HcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCc
Confidence            62 22111                  122379999999999999998776   79999999999987753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.66  E-value=3.9e-16  Score=146.79  Aligned_cols=179  Identities=16%  Similarity=0.079  Sum_probs=128.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ..++++||||+|+||++++++|+++|++|++++|+                                      .+|++|.
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------------------~~Dl~d~   52 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------------------DLDITNV   52 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------------------TCCTTCH
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------------------cCCCCCH
Confidence            46899999999999999999999999999999985                                      1599999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++.++++..     ++|++|||||....     +.+.++++..+++|+.++.++++++.+.     + .++|++||. +
T Consensus        53 ~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~-~~iv~~SS~-~  115 (292)
T 1vl0_A           53 LAVNKFFNEK-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV-----G-AEIVQISTD-Y  115 (292)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEG-G
T ss_pred             HHHHHHHHhc-----CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----C-CeEEEechH-H
Confidence            9998888754     79999999997431     2234668899999999999999998763     2 389999986 2


Q ss_pred             CCCCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhh--------
Q 016493          212 GGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF--------  272 (388)
Q Consensus       212 ~~~~~-----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~--------  272 (388)
                      .+.+.           .+...|+.+|.+.+.+++.++.       .+..+.|+.+..| .............        
T Consensus       116 v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~  187 (292)
T 1vl0_A          116 VFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVV  187 (292)
T ss_dssp             GSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEE
T ss_pred             eECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEee
Confidence            22221           1356899999999999887653       3567778777654 1110000000000        


Q ss_pred             ---hhhccCHHHHHHHHhhhhhhc
Q 016493          273 ---NIICELPETVARTLVPRIRVV  293 (388)
Q Consensus       273 ---~~~~~~pe~vA~~~l~~~~~~  293 (388)
                         ......++++|+.++..+..+
T Consensus       188 ~~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          188 HDQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             SSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             cCeeeCCccHHHHHHHHHHHHhcC
Confidence               001124889999888777654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.65  E-value=2.6e-16  Score=148.93  Aligned_cols=163  Identities=13%  Similarity=0.116  Sum_probs=121.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +++||||+|+||.+++++|+++| ++|++++|+.....  ...+.                     .+. +.+|++|.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---------------------~~~-~~~d~~~~~~   56 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---------------------DLN-IADYMDKEDF   56 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---------------------TSC-CSEEEEHHHH
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---------------------cce-eccccccHHH
Confidence            48999999999999999999999 89999999865421  01111                     111 6789999888


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++..  .++++|++||+||....       +.++.+..+++|+.++.++++++.+.     +. ++|++||.. .+
T Consensus        57 ~~~~~~~~--~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~-v~  120 (310)
T 1eq2_A           57 LIQIMAGE--EFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAA-TY  120 (310)
T ss_dssp             HHHHHTTC--CCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGG-GG
T ss_pred             HHHHHhcc--ccCCCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHH-Hh
Confidence            77765421  02369999999997541       22346788999999999999988653     24 899999862 22


Q ss_pred             CCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          214 SST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       214 ~~~-----------~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ...           .+...|+.+|.+.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       121 g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~G~~~  175 (310)
T 1eq2_A          121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPRE  175 (310)
T ss_dssp             TTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSC
T ss_pred             CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEeCCcEECcCC
Confidence            111           224679999999999999887653   79999999999988753

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.64  E-value=1.4e-15  Score=142.42  Aligned_cols=179  Identities=12%  Similarity=0.065  Sum_probs=127.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      |+++||||+|+||.+++++|+++  |++|++++|++++.+++    ..                   ..+.++.+|++|.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l----~~-------------------~~~~~~~~D~~d~   57 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL----AD-------------------QGVEVRHGDYNQP   57 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH----HH-------------------TTCEEEECCTTCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH----hh-------------------cCCeEEEeccCCH
Confidence            46999999999999999999999  99999999987765432    11                   2467889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       ++|++||+||...        . +      ++|+.++.++++++..    . +.+++|++||.. 
T Consensus        58 ~~l~~~~~-------~~d~vi~~a~~~~--------~-~------~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~-  109 (287)
T 2jl1_A           58 ESLQKAFA-------GVSKLLFISGPHY--------D-N------TLLIVQHANVVKAARD----A-GVKHIAYTGYAF-  109 (287)
T ss_dssp             HHHHHHTT-------TCSEEEECCCCCS--------C-H------HHHHHHHHHHHHHHHH----T-TCSEEEEEEETT-
T ss_pred             HHHHHHHh-------cCCEEEEcCCCCc--------C-c------hHHHHHHHHHHHHHHH----c-CCCEEEEECCCC-
Confidence            88877654       5899999998521        1 1      5788888888777643    3 356899999863 


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch--hhhh------hhhhccCHHHHH
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--NKQM------FNIICELPETVA  283 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~------~~~~~~~pe~vA  283 (388)
                      .. .  ....|+.+|.+.+.+.+.       .|++++.++||.+.++.........  ....      .......++++|
T Consensus       110 ~~-~--~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  179 (287)
T 2jl1_A          110 AE-E--SIIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELA  179 (287)
T ss_dssp             GG-G--CCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHH
T ss_pred             CC-C--CCCchHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHH
Confidence            22 2  224799999999988752       4899999999998776521110000  0000      001123688999


Q ss_pred             HHHhhhhhhc
Q 016493          284 RTLVPRIRVV  293 (388)
Q Consensus       284 ~~~l~~~~~~  293 (388)
                      +.++..+..+
T Consensus       180 ~~~~~~~~~~  189 (287)
T 2jl1_A          180 LAAATVLTEE  189 (287)
T ss_dssp             HHHHHHHTSS
T ss_pred             HHHHHHhcCC
Confidence            9888776544

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.64  E-value=8e-16  Score=145.40  Aligned_cols=160  Identities=12%  Similarity=-0.022  Sum_probs=119.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++++++||||||+|+||.+++++|+++|+      +...                            ....+..+.+|+
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~----------------------------~~~~~~~~~~D~   47 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE----------------------------DWVFVSSKDADL   47 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC----------------------------EEEECCTTTCCT
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc----------------------------cccccCceeccc
Confidence            456789999999999999999999999998      1100                            112344457899


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+++.++++..     ++|+|||+||... ..   ..+.++.+..+++|+.++.++++++..    . +..++|++||
T Consensus        48 ~d~~~~~~~~~~~-----~~d~Vih~A~~~~-~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~-~~~~~v~~SS  113 (319)
T 4b8w_A           48 TDTAQTRALFEKV-----QPTHVIHLAAMVG-GL---FRNIKYNLDFWRKNVHMNDNVLHSAFE----V-GARKVVSCLS  113 (319)
T ss_dssp             TSHHHHHHHHHHS-----CCSEEEECCCCCC-CH---HHHTTCHHHHHHHHHHHHHHHHHHHHH----T-TCSEEEEECC
T ss_pred             CCHHHHHHHHhhc-----CCCEEEECceecc-cc---cccccCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEEcc
Confidence            9999998888753     6999999999743 11   112234567899999999999888743    3 3468999998


Q ss_pred             CCCCCC----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGGS----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~~----------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .. .+.                +.|....|+.||.+.+.+++.++++.   |++++.++|+.+-.|..
T Consensus       114 ~~-vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          114 TC-IFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             GG-GSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred             hh-hcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCC
Confidence            62 221                11222369999999999999988876   79999999999987753

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.63  E-value=6.2e-16  Score=145.01  Aligned_cols=178  Identities=15%  Similarity=0.080  Sum_probs=128.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||.+++++|+++|++|++++|.                                      ++|++|.+++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------------------~~D~~d~~~~   48 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------------------LLDITNISQV   48 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------------------TSCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------------------ccCCCCHHHH
Confidence            89999999999999999999999999999982                                      2699999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .++++..     ++|++||+||....     +...++++..+++|+.++.++++++.+.      +.++|++||. +.+.
T Consensus        49 ~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~-~vy~  111 (287)
T 3sc6_A           49 QQVVQEI-----RPHIIIHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTD-YVFQ  111 (287)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEG-GGSC
T ss_pred             HHHHHhc-----CCCEEEECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchh-hhcC
Confidence            9888765     79999999998531     1112456889999999999999988553      2479999986 2221


Q ss_pred             C-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhh-----------h
Q 016493          215 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM-----------F  272 (388)
Q Consensus       215 ~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~-----------~  272 (388)
                      +           ..+...|+.+|.+.+.+++.++.       +++.++|+.+-.|.............           .
T Consensus       112 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (287)
T 3sc6_A          112 GDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQ  184 (287)
T ss_dssp             CCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSC
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCc
Confidence            1           22356899999999999887654       35789999987763221100000000           0


Q ss_pred             hhhccCHHHHHHHHhhhhhhcc
Q 016493          273 NIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       273 ~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                      ......++++|+.++..+..+.
T Consensus       185 ~~~~i~v~Dva~~~~~~~~~~~  206 (287)
T 3sc6_A          185 IGSPTYVADLNVMINKLIHTSL  206 (287)
T ss_dssp             EECCEEHHHHHHHHHHHHTSCC
T ss_pred             ccCceEHHHHHHHHHHHHhCCC
Confidence            0011238999999988776654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.61  E-value=6.4e-15  Score=137.74  Aligned_cols=176  Identities=11%  Similarity=0.051  Sum_probs=119.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++||||+|+||.+++++|+++  |++|++++|++++.+++    ..                   ..+.++.+|++|++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----~~-------------------~~~~~~~~D~~d~~   57 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL----AA-------------------QGITVRQADYGDEA   57 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH----HH-------------------TTCEEEECCTTCHH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh----hc-------------------CCCeEEEcCCCCHH
Confidence            4899999999999999999999  99999999997765432    11                   24678899999998


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++       ++|++||+||...                 +.|+.++.++++++    ++. +.+++|++||.. .
T Consensus        58 ~~~~~~~-------~~d~vi~~a~~~~-----------------~~~~~~~~~l~~a~----~~~-~~~~~v~~Ss~~-~  107 (286)
T 2zcu_A           58 ALTSALQ-------GVEKLLLISSSEV-----------------GQRAPQHRNVINAA----KAA-GVKFIAYTSLLH-A  107 (286)
T ss_dssp             HHHHHTT-------TCSEEEECC-------------------------CHHHHHHHHH----HHH-TCCEEEEEEETT-T
T ss_pred             HHHHHHh-------CCCEEEEeCCCCc-----------------hHHHHHHHHHHHHH----HHc-CCCEEEEECCCC-C
Confidence            8877654       5899999998521                 02566666655554    433 357899999873 3


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch-hhh------hhhhhccCHHHHHHH
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-NKQ------MFNIICELPETVART  285 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~------~~~~~~~~pe~vA~~  285 (388)
                      .   +....|+.+|.+.+.+.+.       .|++++.++||.+.+++........ ...      ........++++|+.
T Consensus       108 ~---~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  177 (286)
T 2zcu_A          108 D---TSPLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAA  177 (286)
T ss_dssp             T---TCCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHH
T ss_pred             C---CCcchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHH
Confidence            2   2235799999999988753       4799999999998776431100000 000      001112368999998


Q ss_pred             Hhhhhhhc
Q 016493          286 LVPRIRVV  293 (388)
Q Consensus       286 ~l~~~~~~  293 (388)
                      ++..+..+
T Consensus       178 ~~~~~~~~  185 (286)
T 2zcu_A          178 AARVISEA  185 (286)
T ss_dssp             HHHHHHSS
T ss_pred             HHHHhcCC
Confidence            88777654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.60  E-value=2e-15  Score=142.20  Aligned_cols=180  Identities=17%  Similarity=0.079  Sum_probs=127.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++||||+|+||.+++++|+ +|++|++++|+..                                  .+.+|++|.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------------------~~~~D~~d~~~~   46 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------------------EFCGDFSNPKGV   46 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------------------SSCCCTTCHHHH
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------------------cccccCCCHHHH
Confidence            69999999999999999999 8999999999751                                  146899999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++..     ++|++||+||....     ..+.++++..+++|+.++.++++++..    .  +.++|++||. +.+.
T Consensus        47 ~~~~~~~-----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~-~vy~  109 (299)
T 1n2s_A           47 AETVRKL-----RPDVIVNAAAHTAV-----DKAESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTD-YVFP  109 (299)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEG-GGSC
T ss_pred             HHHHHhc-----CCCEEEECcccCCH-----hhhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEecc-cEEe
Confidence            8887754     69999999997431     111234678899999999999888732    2  2489999986 2222


Q ss_pred             C-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhh----------
Q 016493          215 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN----------  273 (388)
Q Consensus       215 ~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~----------  273 (388)
                      +           ..+...|+.+|.+.+.+++.++.       +++.++||.+.+|...............          
T Consensus       110 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (299)
T 1n2s_A          110 GTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQ  182 (299)
T ss_dssp             CCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSC
T ss_pred             CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCc
Confidence            1           12246899999999998876542       7889999999877432110000000000          


Q ss_pred             -hhccCHHHHHHHHhhhhhhc
Q 016493          274 -IICELPETVARTLVPRIRVV  293 (388)
Q Consensus       274 -~~~~~pe~vA~~~l~~~~~~  293 (388)
                       ......+++|+.++..+..+
T Consensus       183 ~~~~i~v~Dva~~~~~~~~~~  203 (299)
T 1n2s_A          183 YGAPTGAELLADCTAHAIRVA  203 (299)
T ss_dssp             EECCEEHHHHHHHHHHHHHHH
T ss_pred             ccCCeeHHHHHHHHHHHHHHh
Confidence             00113789999888777654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.59  E-value=9.9e-15  Score=141.64  Aligned_cols=154  Identities=11%  Similarity=0.060  Sum_probs=111.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc-CC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD-VC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D-ls  129 (388)
                      +.+|+++||||+|+||.+++++|+++|++|++++|++++..  .+++.+                  ...+.++.+| ++
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~------------------~~~v~~v~~D~l~   62 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA------------------IPNVTLFQGPLLN   62 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT------------------STTEEEEESCCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh------------------cCCcEEEECCccC
Confidence            34688999999999999999999999999999999877642  122211                  1357788999 99


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |.+++.++++       .+|++|||++...       .         +.|..+     +.+++.+++.++.+++|++||.
T Consensus        63 d~~~l~~~~~-------~~d~Vi~~a~~~~-------~---------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           63 NVPLMDTLFE-------GAHLAFINTTSQA-------G---------DEIAIG-----KDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             CHHHHHHHHT-------TCSEEEECCCSTT-------S---------CHHHHH-----HHHHHHHHHHSCCSEEEEEECC
T ss_pred             CHHHHHHHHh-------cCCEEEEcCCCCC-------c---------HHHHHH-----HHHHHHHHHcCCccEEEEeCCc
Confidence            9998887664       5899999997521       0         124333     4444555544215799999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .....+.+....|+.||.+.+.+++.       .|++++.|+||.+-+..
T Consensus       115 ~~~~~~~~~~~~y~~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          115 DHSLYGPWPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             CGGGTSSCCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGGC
T ss_pred             cccccCCCCCccHHHHHHHHHHHHHH-------cCCCEEEEecceecCCc
Confidence            32223334456899999999988864       27999999999876544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.59  E-value=2.9e-14  Score=134.73  Aligned_cols=182  Identities=13%  Similarity=0.164  Sum_probs=119.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-------HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +++++||||+|+||.+++++|+++|++|++++|+.       ++.+.+ +++..                   ..+.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~-------------------~~v~~v~   61 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS-------------------LGVILLE   61 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH-------------------TTCEEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh-------------------CCCEEEE
Confidence            57899999999999999999999999999999987       444332 22221                   3477899


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|.+++.++++       ++|++|||+|...                    +.+..+++++    +++.+...++| 
T Consensus        62 ~D~~d~~~l~~~~~-------~~d~vi~~a~~~~--------------------~~~~~~l~~a----a~~~g~v~~~v-  109 (307)
T 2gas_A           62 GDINDHETLVKAIK-------QVDIVICAAGRLL--------------------IEDQVKIIKA----IKEAGNVKKFF-  109 (307)
T ss_dssp             CCTTCHHHHHHHHT-------TCSEEEECSSSSC--------------------GGGHHHHHHH----HHHHCCCSEEE-
T ss_pred             eCCCCHHHHHHHHh-------CCCEEEECCcccc--------------------cccHHHHHHH----HHhcCCceEEe-
Confidence            99999998877665       5999999998631                    2334444444    44432245776 


Q ss_pred             ecCCCCC----CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-----hhhh------
Q 016493          206 MDGAGSG----GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQ------  270 (388)
Q Consensus       206 isS~~~~----~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~~------  270 (388)
                      .|+.+..    ....|....| .+|.+++.+.+.       .|++++.++||++.+++.......     ....      
T Consensus       110 ~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (307)
T 2gas_A          110 PSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGD  181 (307)
T ss_dssp             CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETT
T ss_pred             ecccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecC
Confidence            3332111    1112335689 999998887752       278999999999988654221100     0000      


Q ss_pred             -hhhhhccCHHHHHHHHhhhhhhcc
Q 016493          271 -MFNIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       271 -~~~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                       ........++++|+.++..+..+.
T Consensus       182 ~~~~~~~i~~~Dva~~~~~~l~~~~  206 (307)
T 2gas_A          182 GNVKGAYVTEADVGTFTIRAANDPN  206 (307)
T ss_dssp             SCSEEEEECHHHHHHHHHHHHTCGG
T ss_pred             CCcceEEeeHHHHHHHHHHHHcCcc
Confidence             001122468999998887776543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.59  E-value=8.8e-15  Score=138.12  Aligned_cols=188  Identities=12%  Similarity=0.021  Sum_probs=125.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|+++||||+|+||.+++++|+++| ++|++++|++++...  +.+..                   ..+.++.+|++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~-------------------~~~~~~~~D~~d~   63 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL-------------------QGAEVVQGDQDDQ   63 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH-------------------TTCEEEECCTTCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH-------------------CCCEEEEecCCCH
Confidence            5899999999999999999999999 999999999776421  22221                   3467889999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++       ++|++|||+|.... .     .       .+.|+.+    ++.+++.+++. +.++||++|+...
T Consensus        64 ~~l~~~~~-------~~d~vi~~a~~~~~-~-----~-------~~~~~~~----~~~~~~aa~~~-gv~~iv~~S~~~~  118 (299)
T 2wm3_A           64 VIMELALN-------GAYATFIVTNYWES-C-----S-------QEQEVKQ----GKLLADLARRL-GLHYVVYSGLENI  118 (299)
T ss_dssp             HHHHHHHT-------TCSEEEECCCHHHH-T-----C-------HHHHHHH----HHHHHHHHHHH-TCSEEEECCCCCH
T ss_pred             HHHHHHHh-------cCCEEEEeCCCCcc-c-----c-------chHHHHH----HHHHHHHHHHc-CCCEEEEEcCccc
Confidence            98887665       58999999985320 0     1       2234334    44555555554 4578999765421


Q ss_pred             CC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc--hhh---------hhhhhhccCH
Q 016493          212 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNK---------QMFNIICELP  279 (388)
Q Consensus       212 ~~-~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~---------~~~~~~~~~p  279 (388)
                      .. ........|+.+|.+++.+.+.       .|++++.++||.+.+++.......  ...         .-.......+
T Consensus       119 ~~~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~  191 (299)
T 2wm3_A          119 KKLTAGRLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSV  191 (299)
T ss_dssp             HHHTTTSCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECG
T ss_pred             cccCCCcccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecH
Confidence            10 1111246799999999988764       379999999999988864311100  000         0001112367


Q ss_pred             HHHHHHHhhhhhhc
Q 016493          280 ETVARTLVPRIRVV  293 (388)
Q Consensus       280 e~vA~~~l~~~~~~  293 (388)
                      +++|+.++..+..+
T Consensus       192 ~Dva~~~~~~l~~~  205 (299)
T 2wm3_A          192 SDLGPVVLSLLKMP  205 (299)
T ss_dssp             GGHHHHHHHHHHSH
T ss_pred             HHHHHHHHHHHcCh
Confidence            88888887766543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.59  E-value=3.1e-15  Score=152.08  Aligned_cols=175  Identities=16%  Similarity=0.135  Sum_probs=125.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH---HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES---VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~---l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..++|+||||+|+||.+++++|.++|++|++++|+..+   .+++.+.+.......        .......++.++.+|+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~--------~~~~~~~~v~~v~~Dl  220 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEE--------TVEMMLSNIEVIVGDF  220 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHH--------HHHHHSTTEEEEEEBT
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccc--------cchhccCceEEEecCC
Confidence            35899999999999999999999999999999998773   333333332210000        0000235799999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++++++.        ...++|+||||||...        ....++..+++|+.++.++++++.+      +..++|++||
T Consensus       221 ~d~~~l~--------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~------~~~~~v~iSS  278 (508)
T 4f6l_B          221 ECMDDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVST  278 (508)
T ss_dssp             TBCSSCC--------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT------TTCEEEEEEE
T ss_pred             cccccCC--------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh------CCCcEEEeCC
Confidence            9988776        3458999999999743        1235677889999999999998754      2468999998


Q ss_pred             CCCCCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          209 AGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       209 ~~~~~~-----------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ...+..                 +......|+.||.+.+.+++.++.    .|++++.+.||.|-.+..
T Consensus       279 ~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~  343 (508)
T 4f6l_B          279 ISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYN  343 (508)
T ss_dssp             SCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSS
T ss_pred             hhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCC
Confidence            743110                 011456899999999999887653    589999999999977643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.58  E-value=6.4e-14  Score=135.12  Aligned_cols=186  Identities=13%  Similarity=0.105  Sum_probs=127.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+++|+||||+|+||++++++|+++|++|++++|+.    ++.+. .+++.                   ...+.++.+|
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~-------------------~~~v~~~~~D   68 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALE-------------------DKGAIIVYGL   68 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHH-------------------HTTCEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHH-------------------hCCcEEEEee
Confidence            457899999999999999999999999999999987    33321 12222                   1457889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.+++.+++++.     ++|+|||++|.                    .|+.++.++++++...    +...++|. |
T Consensus        69 l~d~~~l~~~~~~~-----~~d~Vi~~a~~--------------------~n~~~~~~l~~aa~~~----g~v~~~v~-S  118 (346)
T 3i6i_A           69 INEQEAMEKILKEH-----EIDIVVSTVGG--------------------ESILDQIALVKAMKAV----GTIKRFLP-S  118 (346)
T ss_dssp             TTCHHHHHHHHHHT-----TCCEEEECCCG--------------------GGGGGHHHHHHHHHHH----CCCSEEEC-S
T ss_pred             cCCHHHHHHHHhhC-----CCCEEEECCch--------------------hhHHHHHHHHHHHHHc----CCceEEee-c
Confidence            99999998887653     69999999986                    1778887777776543    11446664 4


Q ss_pred             CCCCC---CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc-----hhh-------hhh
Q 016493          208 GAGSG---GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNK-------QMF  272 (388)
Q Consensus       208 S~~~~---~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~-----~~~-------~~~  272 (388)
                      +.+..   ..+.++...|+.+|.+++.+.+.       .|+.++.++||.+-..+.......     ...       .-.
T Consensus       119 ~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~  191 (346)
T 3i6i_A          119 EFGHDVNRADPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNV  191 (346)
T ss_dssp             CCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCC
T ss_pred             ccCCCCCccCcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCc
Confidence            43211   11224567899999998877754       479999999998877543211100     000       000


Q ss_pred             hhhccCHHHHHHHHhhhhhhcc
Q 016493          273 NIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       273 ~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                      .......+++|+.++..+..++
T Consensus       192 ~~~~i~~~Dva~~~~~~l~~~~  213 (346)
T 3i6i_A          192 KAYFVAGTDIGKFTMKTVDDVR  213 (346)
T ss_dssp             CEEEECHHHHHHHHHHHTTCGG
T ss_pred             eEEecCHHHHHHHHHHHHhCcc
Confidence            1122468999999988777664

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.57  E-value=2.1e-15  Score=141.53  Aligned_cols=183  Identities=15%  Similarity=0.074  Sum_probs=127.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++++++||| +|+||.+++++|+++|++|++++|+.+++                           ...+.++.+|++|.
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------------------~~~~~~~~~Dl~d~   53 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------------------PAGVQTLIADVTRP   53 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------------------CTTCCEEECCTTCG
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------------------ccCCceEEccCCCh
Confidence            457899999 59999999999999999999999986541                           24577899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++      +++|++||+||...          ++.+..+++|+.++.++++++.    +. +.+++|++||.. 
T Consensus        54 ~~~~~~~~------~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~ll~a~~----~~-~~~~~v~~SS~~-  111 (286)
T 3gpi_A           54 DTLASIVH------LRPEILVYCVAASE----------YSDEHYRLSYVEGLRNTLSALE----GA-PLQHVFFVSSTG-  111 (286)
T ss_dssp             GGCTTGGG------GCCSEEEECHHHHH----------HC-----CCSHHHHHHHHHHTT----TS-CCCEEEEEEEGG-
T ss_pred             HHHHHhhc------CCCCEEEEeCCCCC----------CCHHHHHHHHHHHHHHHHHHHh----hC-CCCEEEEEcccE-
Confidence            98877654      36999999998631          3456788999999988887764    33 457999999863 


Q ss_pred             CCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh-hh-----hhh
Q 016493          212 GGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-QM-----FNI  274 (388)
Q Consensus       212 ~~~~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~-----~~~  274 (388)
                      .+..           ..+...|+.+|.+.+.+ +.    +    ++++.+.||.+..|........... ..     ...
T Consensus       112 vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~----~----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  182 (286)
T 3gpi_A          112 VYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LA----A----YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWT  182 (286)
T ss_dssp             GCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GG----G----SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEE
T ss_pred             EEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hh----c----CCeEEEecccccCCCchhHHHHHHhcccCCCcCcee
Confidence            2211           12356899999988877 43    2    7889999999977643211000000 00     000


Q ss_pred             hccCHHHHHHHHhhhhhhc
Q 016493          275 ICELPETVARTLVPRIRVV  293 (388)
Q Consensus       275 ~~~~pe~vA~~~l~~~~~~  293 (388)
                      -....+++|+.++..+..+
T Consensus       183 ~~i~v~Dva~~~~~~~~~~  201 (286)
T 3gpi_A          183 NRIHRDDGAAFIAYLIQQR  201 (286)
T ss_dssp             CEEEHHHHHHHHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHHhhh
Confidence            1124789999998877765

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.55  E-value=1.7e-15  Score=143.85  Aligned_cols=198  Identities=13%  Similarity=0.014  Sum_probs=126.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +.+++|+||||+|+||.+++++|+++|++|++++|+........+.+..               ......+.++.+|++ 
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl~-   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKPVLELEERDLS-   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE---------------EECSCGGGCCHHHHT-
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh---------------hccCCCeeEEeCccc-
Confidence            4578999999999999999999999999999999976510000000000               001123444555554 


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                                      ++|++||+||.... ....+    ..+..++ |+.++.++++++...     +..++|++||..
T Consensus        69 ----------------~~d~vi~~a~~~~~-~~~~~----~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~  121 (321)
T 3vps_A           69 ----------------DVRLVYHLASHKSV-PRSFK----QPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCE  121 (321)
T ss_dssp             ----------------TEEEEEECCCCCCH-HHHTT----STTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGG
T ss_pred             ----------------cCCEEEECCccCCh-HHHHh----CHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHH
Confidence                            69999999997541 11111    1233455 999999988887553     246899999862


Q ss_pred             CCCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccccccccCcc--chhhhh-h---
Q 016493          211 SGGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLLLSGST--IQNKQM-F---  272 (388)
Q Consensus       211 ~~~~-----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI-~vn~v~PG~v~T~~~~~~~~--~~~~~~-~---  272 (388)
                       .+.           +..+...|+.+|.+.+.+++.++.+.   |+ +++.++|+.+..|.......  ...... .   
T Consensus       122 -v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~  197 (321)
T 3vps_A          122 -VYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNE  197 (321)
T ss_dssp             -GGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS---SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSE
T ss_pred             -HhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCC
Confidence             221           11235689999999999999888764   78 99999999998775332100  000000 0   


Q ss_pred             -h--------hhccCHHHHHHHHhhhhhhccc
Q 016493          273 -N--------IICELPETVARTLVPRIRVVKG  295 (388)
Q Consensus       273 -~--------~~~~~pe~vA~~~l~~~~~~~~  295 (388)
                       .        ......+++|+.++..+..+..
T Consensus       198 ~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~  229 (321)
T 3vps_A          198 LPVEGDGEQRRDFTYITDVVDKLVALANRPLP  229 (321)
T ss_dssp             EEEETTSCCEECEEEHHHHHHHHHHGGGSCCC
T ss_pred             eEEeCCCCceEceEEHHHHHHHHHHHHhcCCC
Confidence             0        0112578999999887766544

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.54  E-value=5.2e-14  Score=132.07  Aligned_cols=181  Identities=13%  Similarity=0.077  Sum_probs=118.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +|+||||+|+||++++++|+++ |++|++++|++++.++.                       ....+.++.+|++|+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-----------------------~~~~v~~~~~D~~d~~~   58 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-----------------------WRGKVSVRQLDYFNQES   58 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-----------------------GBTTBEEEECCTTCHHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-----------------------hhCCCEEEEcCCCCHHH
Confidence            4999999999999999999998 99999999998754321                       12468889999999998


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +.++++       ++|++|||||...+        .       ..|+.++    +.+++.+++. +.++||++||.+ ..
T Consensus        59 l~~~~~-------~~d~vi~~a~~~~~--------~-------~~~~~~~----~~l~~aa~~~-gv~~iv~~Ss~~-~~  110 (289)
T 3e48_A           59 MVEAFK-------GMDTVVFIPSIIHP--------S-------FKRIPEV----ENLVYAAKQS-GVAHIIFIGYYA-DQ  110 (289)
T ss_dssp             HHHHTT-------TCSEEEECCCCCCS--------H-------HHHHHHH----HHHHHHHHHT-TCCEEEEEEESC-CS
T ss_pred             HHHHHh-------CCCEEEEeCCCCcc--------c-------hhhHHHH----HHHHHHHHHc-CCCEEEEEcccC-CC
Confidence            877664       68999999987431        1       1244444    4555556655 357999999863 22


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh-------hhhhhccCHHHHHHHH
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-------MFNIICELPETVARTL  286 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-------~~~~~~~~pe~vA~~~  286 (388)
                      ..    ..|..+|..     ..+..++...|++++.++||.+.+++...........       ........++++|+.+
T Consensus       111 ~~----~~~~~~~~~-----~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~  181 (289)
T 3e48_A          111 HN----NPFHMSPYF-----GYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGV  181 (289)
T ss_dssp             TT----CCSTTHHHH-----HHHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHH
T ss_pred             CC----CCCccchhH-----HHHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHH
Confidence            21    123333321     1222333445899999999999887542111000000       0001123689999988


Q ss_pred             hhhhhhccc
Q 016493          287 VPRIRVVKG  295 (388)
Q Consensus       287 l~~~~~~~~  295 (388)
                      +..+..+..
T Consensus       182 ~~~l~~~~~  190 (289)
T 3e48_A          182 IAIIKNPDT  190 (289)
T ss_dssp             HHHHHCGGG
T ss_pred             HHHHcCCCc
Confidence            877765543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.51  E-value=4e-13  Score=127.26  Aligned_cols=186  Identities=13%  Similarity=0.120  Sum_probs=121.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-----HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-----~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++||||+|+||.+++++|+++|++|++++|+.     ++.+.+ +++.                   ...+.++.+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~D   63 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK-------------------QLGAKLIEAS   63 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH-------------------TTTCEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH-------------------hCCeEEEeCC
Confidence            46899999999999999999999999999999984     332221 1221                   1357889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|++++.++++       ++|++||++|.... .               .|+.+..++++++    ++.++.+++|. |
T Consensus        64 ~~d~~~l~~~~~-------~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S  115 (313)
T 1qyd_A           64 LDDHQRLVDALK-------QVDVVISALAGGVL-S---------------HHILEQLKLVEAI----KEAGNIKRFLP-S  115 (313)
T ss_dssp             SSCHHHHHHHHT-------TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHH----HHSCCCSEEEC-S
T ss_pred             CCCHHHHHHHHh-------CCCEEEECCccccc-h---------------hhHHHHHHHHHHH----HhcCCCceEEe-c
Confidence            999998877665       58999999997531 1               2566665555554    44422467774 4


Q ss_pred             CCCCCCC----C-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc------chhhh--h---
Q 016493          208 GAGSGGS----S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST------IQNKQ--M---  271 (388)
Q Consensus       208 S~~~~~~----~-~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~------~~~~~--~---  271 (388)
                      +.+....    + .|....| .+|.+++.+.+.       .|++++.++||.+.+++......      .....  .   
T Consensus       116 ~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (313)
T 1qyd_A          116 EFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGD  187 (313)
T ss_dssp             CCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTT
T ss_pred             CCcCCccccccCCCCCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCC
Confidence            3321111    1 2335678 999998877652       47889999999987654321110      00000  0   


Q ss_pred             --hhhhccCHHHHHHHHhhhhhhcc
Q 016493          272 --FNIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       272 --~~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                        .......++++|+.++..+..++
T Consensus       188 g~~~~~~i~~~Dva~~~~~~l~~~~  212 (313)
T 1qyd_A          188 GNVKGIWVDEDDVGTYTIKSIDDPQ  212 (313)
T ss_dssp             SCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred             CCceEEEEEHHHHHHHHHHHHhCcc
Confidence              01122468999999887776554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.50  E-value=2.3e-13  Score=129.59  Aligned_cols=182  Identities=14%  Similarity=0.118  Sum_probs=115.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh------HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~------~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +++++||||+|+||.+++++|+++|++|++++|+.      ++.+ ..+++..                   ..+.++.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~l~~~~~-------------------~~v~~v~~   63 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQ-LREEFRS-------------------MGVTIIEG   63 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHH-HHHHHHH-------------------TTCEEEEC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHH-HHHHhhc-------------------CCcEEEEe
Confidence            46799999999999999999999999999999986      2222 1222211                   34788999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.+++.++++       ++|++||++|...                    +.+..++    ++.+++.+..+++| .
T Consensus        64 D~~d~~~l~~a~~-------~~d~vi~~a~~~~--------------------~~~~~~l----~~aa~~~g~v~~~v-~  111 (321)
T 3c1o_A           64 EMEEHEKMVSVLK-------QVDIVISALPFPM--------------------ISSQIHI----INAIKAAGNIKRFL-P  111 (321)
T ss_dssp             CTTCHHHHHHHHT-------TCSEEEECCCGGG--------------------SGGGHHH----HHHHHHHCCCCEEE-C
T ss_pred             cCCCHHHHHHHHc-------CCCEEEECCCccc--------------------hhhHHHH----HHHHHHhCCccEEe-c
Confidence            9999998887765       5899999998621                    2333344    44444442145776 3


Q ss_pred             cCCCCC----CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccC-------cc-c----hhhh
Q 016493          207 DGAGSG----GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG-------ST-I----QNKQ  270 (388)
Q Consensus       207 sS~~~~----~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~-------~~-~----~~~~  270 (388)
                      |+.+..    ....|....| .+|.+++.+.+.       .|++++.|+||.+..++....       .. .    ....
T Consensus       112 S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (321)
T 3c1o_A          112 SDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTG  183 (321)
T ss_dssp             SCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTS
T ss_pred             cccccCccccccCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCC
Confidence            332110    0011224579 999999888752       268888899998866432110       00 0    0000


Q ss_pred             hhhhhccCHHHHHHHHhhhhhhcc
Q 016493          271 MFNIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       271 ~~~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                      ........++++|+.++..+..+.
T Consensus       184 ~~~~~~i~~~Dva~~~~~~l~~~~  207 (321)
T 3c1o_A          184 ETKFVLNYEEDIAKYTIKVACDPR  207 (321)
T ss_dssp             CCEEEEECHHHHHHHHHHHHHCGG
T ss_pred             CcceeEeeHHHHHHHHHHHHhCcc
Confidence            011122468899998887776543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.45  E-value=3.4e-13  Score=128.31  Aligned_cols=182  Identities=11%  Similarity=0.123  Sum_probs=115.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++||||+|+||.+++++|+++|++|++++|+.+...+..+++..                   ..+.++++|++|.++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-------------------~~v~~v~~Dl~d~~~   72 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-------------------LGAIIVKGELDEHEK   72 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-------------------TTCEEEECCTTCHHH
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-------------------CCCEEEEecCCCHHH
Confidence            6799999999999999999999999999999987522222222221                   347789999999998


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +.++++       ++|++||++|...                    +.+.    +.+++.+++.+..+++|. |+.+...
T Consensus        73 l~~a~~-------~~d~vi~~a~~~~--------------------~~~~----~~l~~aa~~~g~v~~~v~-S~~g~~~  120 (318)
T 2r6j_A           73 LVELMK-------KVDVVISALAFPQ--------------------ILDQ----FKILEAIKVAGNIKRFLP-SDFGVEE  120 (318)
T ss_dssp             HHHHHT-------TCSEEEECCCGGG--------------------STTH----HHHHHHHHHHCCCCEEEC-SCCSSCT
T ss_pred             HHHHHc-------CCCEEEECCchhh--------------------hHHH----HHHHHHHHhcCCCCEEEe-eccccCc
Confidence            887765       5899999998621                    2233    334444444422457763 4331111


Q ss_pred             C---C-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccccc----C-ccc----hhhhhhhhhccCHH
Q 016493          214 S---S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS----G-STI----QNKQMFNIICELPE  280 (388)
Q Consensus       214 ~---~-~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~----~-~~~----~~~~~~~~~~~~pe  280 (388)
                      .   + .|....| .+|.+++.+.+.       .|++++.++||.+..++...    . ...    ............++
T Consensus       121 ~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  192 (318)
T 2r6j_A          121 DRINALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQ  192 (318)
T ss_dssp             TTCCCCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHH
T ss_pred             ccccCCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHH
Confidence            1   0 1123578 999998877653       47888899999876543211    0 000    00000011223688


Q ss_pred             HHHHHHhhhhhhcc
Q 016493          281 TVARTLVPRIRVVK  294 (388)
Q Consensus       281 ~vA~~~l~~~~~~~  294 (388)
                      ++|+.++..+..++
T Consensus       193 Dva~~~~~~l~~~~  206 (318)
T 2r6j_A          193 DIGLYTIKVATDPR  206 (318)
T ss_dssp             HHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHhcCcc
Confidence            99998887776543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.45  E-value=7.9e-13  Score=123.64  Aligned_cols=176  Identities=11%  Similarity=0.036  Sum_probs=119.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++|||| |.||.+++++|+++|++|++++|++++.+.+.    .                   ..+.++.+|++|.+ 
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-------------------~~~~~~~~D~~d~~-   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A-------------------SGAEPLLWPGEEPS-   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H-------------------TTEEEEESSSSCCC-
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h-------------------CCCeEEEecccccc-
Confidence            68999998 99999999999999999999999987764331    1                   35888999999933 


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcEEEEecCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSG  212 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~Iv~isS~~~~  212 (388)
                                 +.++|++||+||.... .     .+                .++.++..+++. .+..++|++||.. .
T Consensus        61 -----------~~~~d~vi~~a~~~~~-~-----~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~-v  106 (286)
T 3ius_A           61 -----------LDGVTHLLISTAPDSG-G-----DP----------------VLAALGDQIAARAAQFRWVGYLSTTA-V  106 (286)
T ss_dssp             -----------CTTCCEEEECCCCBTT-B-----CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGG-G
T ss_pred             -----------cCCCCEEEECCCcccc-c-----cH----------------HHHHHHHHHHhhcCCceEEEEeecce-e
Confidence                       4579999999997541 1     11                123444445542 1357899999862 2


Q ss_pred             CC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh-------hhhhh
Q 016493          213 GS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-------QMFNI  274 (388)
Q Consensus       213 ~~-----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-------~~~~~  274 (388)
                      +.           +..+...|+.+|.+.+.+.+.+      .|++++.++||.+..+...........       .-...
T Consensus       107 yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  180 (286)
T 3ius_A          107 YGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVF  180 (286)
T ss_dssp             GCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCB
T ss_pred             cCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCccc
Confidence            11           1123457999999998888765      589999999999977642211100000       00011


Q ss_pred             hccCHHHHHHHHhhhhhhcc
Q 016493          275 ICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       275 ~~~~pe~vA~~~l~~~~~~~  294 (388)
                      -....+++|+.++..+..+.
T Consensus       181 ~~i~v~Dva~a~~~~~~~~~  200 (286)
T 3ius_A          181 SRIHVEDIAQVLAASMARPD  200 (286)
T ss_dssp             CEEEHHHHHHHHHHHHHSCC
T ss_pred             ceEEHHHHHHHHHHHHhCCC
Confidence            11346899999988776654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.44  E-value=5.1e-13  Score=126.19  Aligned_cols=186  Identities=13%  Similarity=0.172  Sum_probs=116.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH--HHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV--RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++++||||+|+||.+++++|+++|++|++++|+....  .+..+.+.+.                ....+.++++|++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l----------------~~~~v~~v~~D~~d   67 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF----------------KASGANIVHGSIDD   67 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH----------------HTTTCEEECCCTTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH----------------HhCCCEEEEeccCC
Confidence            47899999999999999999999999999999985321  1111112111                11357889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .+++.++++       ++|++||++|...                    +.+..+++    +.+++.++.+++|. |+.+
T Consensus        68 ~~~l~~~~~-------~~d~vi~~a~~~~--------------------~~~~~~l~----~aa~~~g~v~~~v~-S~~g  115 (308)
T 1qyc_A           68 HASLVEAVK-------NVDVVISTVGSLQ--------------------IESQVNII----KAIKEVGTVKRFFP-SEFG  115 (308)
T ss_dssp             HHHHHHHHH-------TCSEEEECCCGGG--------------------SGGGHHHH----HHHHHHCCCSEEEC-SCCS
T ss_pred             HHHHHHHHc-------CCCEEEECCcchh--------------------hhhHHHHH----HHHHhcCCCceEee-cccc
Confidence            998887765       5899999998621                    22333444    44444422467763 4432


Q ss_pred             CCC---CC-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc-----chhhh-------hhhh
Q 016493          211 SGG---SS-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST-----IQNKQ-------MFNI  274 (388)
Q Consensus       211 ~~~---~~-~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~-----~~~~~-------~~~~  274 (388)
                      ...   .+ .|....| .+|.+++.+.+.       .|++++.++||.+.+++......     .....       ....
T Consensus       116 ~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (308)
T 1qyc_A          116 NDVDNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARV  187 (308)
T ss_dssp             SCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEE
T ss_pred             cCccccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceE
Confidence            111   11 2234578 999998887753       26888899999886653321100     00000       0011


Q ss_pred             hccCHHHHHHHHhhhhhhcc
Q 016493          275 ICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       275 ~~~~pe~vA~~~l~~~~~~~  294 (388)
                      ....++++|+.++..+..+.
T Consensus       188 ~~i~~~Dva~~~~~~l~~~~  207 (308)
T 1qyc_A          188 VFVKEEDIGTFTIKAVDDPR  207 (308)
T ss_dssp             EEECHHHHHHHHHTTSSCGG
T ss_pred             EEecHHHHHHHHHHHHhCcc
Confidence            22367899998887765543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.41  E-value=1.3e-12  Score=127.01  Aligned_cols=171  Identities=15%  Similarity=0.104  Sum_probs=121.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +|+||||+|+||++++++|+++|+ +|+..+|+                                          +|.++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------------------~d~~~   39 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------------------TKEEE   39 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------------------CCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------------------CCHHH
Confidence            599999999999999999999998 88877662                                          45566


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++       ++|++||+||...+         ++.+..+++|+.++.++++++    ++.+...++|++||.. ..
T Consensus        40 l~~~~~-------~~d~Vih~a~~~~~---------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~-~~   98 (369)
T 3st7_A           40 LESALL-------KADFIVHLAGVNRP---------EHDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQ-AT   98 (369)
T ss_dssp             HHHHHH-------HCSEEEECCCSBCT---------TCSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGG-GG
T ss_pred             HHHHhc-------cCCEEEECCcCCCC---------CCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchh-hc
Confidence            666655       48999999997542         123456789999998888876    3332234899999873 22


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh----h------------hhhhcc
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ----M------------FNIICE  277 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----~------------~~~~~~  277 (388)
                      .    ...|+.+|.+.+.+.+.++++.   |++++.+.|+.+-.+............    .            ......
T Consensus        99 ~----~~~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  171 (369)
T 3st7_A           99 Q----DNPYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLN  171 (369)
T ss_dssp             S----CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEE
T ss_pred             C----CCCchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEE
Confidence            2    5689999999999999998876   689999999998776432211000000    0            000112


Q ss_pred             CHHHHHHHHhhhhhhccc
Q 016493          278 LPETVARTLVPRIRVVKG  295 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~~  295 (388)
                      ..+++|+.++..+..+..
T Consensus       172 ~v~Dva~~~~~~l~~~~~  189 (369)
T 3st7_A          172 YVDDIVAEIKRAIEGTPT  189 (369)
T ss_dssp             EHHHHHHHHHHHHHTCCC
T ss_pred             EHHHHHHHHHHHHhCCcc
Confidence            478899988887766544

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.38  E-value=1.9e-12  Score=131.90  Aligned_cols=188  Identities=15%  Similarity=0.134  Sum_probs=125.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++||||||+|+||.+++++|+++|++|++++|+..+.                            .   .+.+|+.+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------------------~---~v~~d~~~~~  195 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------------------G---KRFWDPLNPA  195 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------------------T---CEECCTTSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------------------c---ceeecccchh
Confidence            68999999999999999999999999999999986531                            0   1567776431


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                               .+.+.++|+|||+||... .   ...+.+..+..+++|+.++.++++++.   ++. +.+++|++||.. .
T Consensus       196 ---------~~~l~~~D~Vih~A~~~~-~---~~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~-~~~r~V~~SS~~-v  257 (516)
T 3oh8_A          196 ---------SDLLDGADVLVHLAGEPI-F---GRFNDSHKEAIRESRVLPTKFLAELVA---EST-QCTTMISASAVG-F  257 (516)
T ss_dssp             ---------TTTTTTCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH---HCS-SCCEEEEEEEGG-G
T ss_pred             ---------HHhcCCCCEEEECCCCcc-c---cccchhHHHHHHHHHHHHHHHHHHHHH---hcC-CCCEEEEeCcce-E
Confidence                     223357999999999753 1   144556678899999999999998743   222 457899999862 2


Q ss_pred             CC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh--------h--
Q 016493          213 GS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ--------M--  271 (388)
Q Consensus       213 ~~-----------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--------~--  271 (388)
                      +.           ...+...|+.+|...+.+.+    +....|++++.+.||.+.+|.... .......        .  
T Consensus       258 yg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~~~~-~~~~~~~~~~g~~~~~g~  332 (516)
T 3oh8_A          258 YGHDRGDEILTEESESGDDFLAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGRGGM-LPLLKTLFSTGLGGKFGD  332 (516)
T ss_dssp             GCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTTBSH-HHHHHHTTC---CCCCTT
T ss_pred             ecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCCCCh-HHHHHHHHHhCCCcccCC
Confidence            21           01134568888887665543    334468999999999998864210 0000000        0  


Q ss_pred             --hhhhccCHHHHHHHHhhhhhhcc
Q 016493          272 --FNIICELPETVARTLVPRIRVVK  294 (388)
Q Consensus       272 --~~~~~~~pe~vA~~~l~~~~~~~  294 (388)
                        ........+++|+.++..+..+.
T Consensus       333 g~~~~~~i~v~Dva~ai~~~l~~~~  357 (516)
T 3oh8_A          333 GTSWFSWIAIDDLTDIYYRAIVDAQ  357 (516)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHCTT
T ss_pred             CCceEceEeHHHHHHHHHHHHhCcc
Confidence              00011247899998887776543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.38  E-value=1.1e-13  Score=130.44  Aligned_cols=111  Identities=15%  Similarity=0.186  Sum_probs=84.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||+++||||+||||+++++.|+++|++|++++|+.++++++.+++...                  ..+.++.+|+
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~------------------~~~~~~~~D~  176 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------------------FKVNVTAAET  176 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------------HTCCCEEEEC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc------------------CCcEEEEecC
Confidence            5678999999999999999999999999999999999999888887776542                  1245678999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCH-HHHHHHHHhhchHHH
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIVSTNLVGSI  184 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-~~~~~~~~vN~~g~~  184 (388)
                      +|+++++++++       .+|++|||+|......++.+.+. ++++.++++|+.+++
T Consensus       177 ~~~~~~~~~~~-------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          177 ADDASRAEAVK-------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CSHHHHHHHTT-------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CCHHHHHHHHH-------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            99988876654       47999999986431122222222 444557788887765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.36  E-value=1.2e-12  Score=126.55  Aligned_cols=159  Identities=14%  Similarity=0.102  Sum_probs=111.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSG-----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G-----~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +|+++||||+|+||.+++++|+++|     ++|++++|+..+..     +                   ...++.++.+|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-------------------~~~~~~~~~~D   56 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-------------------EDNPINYVQCD   56 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-------------------CSSCCEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-------------------ccCceEEEEee
Confidence            4689999999999999999999999     99999999865421     0                   12467889999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE---
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF---  204 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv---  204 (388)
                      ++|.+++.++++.+    +++|++||+||...          ++.+..+++|+.++.++++++.+...   +..++|   
T Consensus        57 l~d~~~~~~~~~~~----~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~---~~~~~v~~~  119 (364)
T 2v6g_A           57 ISDPDDSQAKLSPL----TDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQT  119 (364)
T ss_dssp             TTSHHHHHHHHTTC----TTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT---TCCEEEEEC
T ss_pred             cCCHHHHHHHHhcC----CCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc---ccceEEecc
Confidence            99999887766532    24999999999742          13567889999999999998765321   234665   


Q ss_pred             ----EecCCCCCCCC--------------CCCchhhHHHHHHHHHHHHHHHHHhCCCC-eEEEEEecCccccccc
Q 016493          205 ----NMDGAGSGGSS--------------TPLTAVYGSTKCGLRQLQASLFKESKRSK-VGVHTASPGMVLTDLL  260 (388)
Q Consensus       205 ----~isS~~~~~~~--------------~~~~~~Y~aSK~al~~l~~~la~el~~~g-I~vn~v~PG~v~T~~~  260 (388)
                          ++||.. .+..              .+....|.    +.+.+++.++   ...| ++++.++|+.+-.|..
T Consensus       120 g~~i~~Ss~~-vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~---~~~~~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          120 GRKHYMGPFE-SYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEV---EKKEGLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             CTHHHHCCGG-GTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHH---TTSTTCEEEEEEESSEECCCT
T ss_pred             CceEEEechh-hccccccCCCCCCccccCCccchhhH----HHHHHHHHHh---hcCCCceEEEECCCceeCCCC
Confidence                677752 1111              11133463    2333333333   2245 9999999999987643

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.33  E-value=2.6e-13  Score=122.68  Aligned_cols=191  Identities=13%  Similarity=0.092  Sum_probs=114.4

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCc
Q 016493           50 KAGPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK  113 (388)
Q Consensus        50 ~~~gk~vlITGa----------------s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  113 (388)
                      +++||+||||||                |||||+++|+.|+++|++|++++++.. ++                      
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~----------------------   61 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP----------------------   61 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC----------------------
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc----------------------
Confidence            478999999999                689999999999999999999988642 10                      


Q ss_pred             ccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHH--HHhhchHHHHHHHHHH
Q 016493          114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI--VSTNLVGSILCTREAM  191 (388)
Q Consensus       114 ~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~--~~vN~~g~~~l~~~~l  191 (388)
                         ....+  -.+|+++.+   ++++.+.+.++++|++|||||+.. +.+. ....+.+.+.  -+.|+.-.+..+.-++
T Consensus        62 ---~~~g~--~~~dv~~~~---~~~~~v~~~~~~~Dili~~Aav~d-~~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL  131 (226)
T 1u7z_A           62 ---TPPFV--KRVDVMTAL---EMEAAVNASVQQQNIFIGCAAVAD-YRAA-TVAPEKIKKQATQGDELTIKMVKNPDIV  131 (226)
T ss_dssp             ---CCTTE--EEEECCSHH---HHHHHHHHHGGGCSEEEECCBCCS-EEES-SCCSSCC-------CEEEEEEEECCCHH
T ss_pred             ---cCCCC--eEEccCcHH---HHHHHHHHhcCCCCEEEECCcccC-CCCc-cCChHHhccccccCCceEEEEeecHHHH
Confidence               00112  246777754   456677788899999999999865 4444 3333344441  1334444444555667


Q ss_pred             HHHHcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc-ccccccccCc--cchh
Q 016493          192 RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM-VLTDLLLSGS--TIQN  268 (388)
Q Consensus       192 p~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~-v~T~~~~~~~--~~~~  268 (388)
                      +.+.+...++.+ .++ . ..         +.      +.+.+..+.++.++|+.+.+.+|-. ..+.|..+..  ....
T Consensus       132 ~~l~~~~~~~~~-~VG-F-aa---------Et------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~  193 (226)
T 1u7z_A          132 AGVAALKDHRPY-VVG-F-AA---------ET------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFW  193 (226)
T ss_dssp             HHHHHCSSSCCE-EEE-E-EE---------ES------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEE
T ss_pred             HHHHhhhcCCcE-EEE-c-ch---------hh------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEe
Confidence            777654223333 221 1 11         11      2266667777777788777777654 3344332210  0000


Q ss_pred             h-hhhhhhccCHHHHHHHHhhhhh
Q 016493          269 K-QMFNIICELPETVARTLVPRIR  291 (388)
Q Consensus       269 ~-~~~~~~~~~pe~vA~~~l~~~~  291 (388)
                      . .......++++++|+.++.++.
T Consensus       194 ~~~~~~~~~~sK~~vA~~I~~~i~  217 (226)
T 1u7z_A          194 QDGDKVLPLERKELLGQLLLDEIV  217 (226)
T ss_dssp             TTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred             CCCcEecCCCCHHHHHHHHHHHHH
Confidence            0 0112334578999999987764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.02  E-value=3.8e-09  Score=99.25  Aligned_cols=151  Identities=17%  Similarity=0.211  Sum_probs=99.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +||||||||.||.+++++|.++|++|+++.|++.+                             ..+   ..|     .+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------------------~~~---~~~-----~~   44 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------------------GRI---TWD-----EL   44 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------------------TEE---EHH-----HH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------------------Cee---ecc-----hh
Confidence            48999999999999999999999999999997532                             111   112     11


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      .      .+....+|.+||.||... ..+....+.+..+..++.|+.++-++.+.+...   ..+..++|+.||. +.+.
T Consensus        45 ~------~~~l~~~d~vihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~-~vyg  113 (298)
T 4b4o_A           45 A------ASGLPSCDAAVNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGV-AYYQ  113 (298)
T ss_dssp             H------HHCCCSCSEEEECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEG-GGSC
T ss_pred             h------HhhccCCCEEEEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeee-eeec
Confidence            1      123457999999998654 344556677888889999998887776654321   1123456677665 2221


Q ss_pred             C-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          215 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       215 ~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      .           ......|+..|...+.     .......++++..+.||.|..|
T Consensus       114 ~~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~  163 (298)
T 4b4o_A          114 PSLTAEYDEDSPGGDFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGR  163 (298)
T ss_dssp             CCSSCCBCTTCCCSCSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECT
T ss_pred             CCCCCcccccCCccccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcC
Confidence            1           1122345545443332     2234567899999999998776

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.91  E-value=1.2e-09  Score=104.77  Aligned_cols=161  Identities=14%  Similarity=0.097  Sum_probs=103.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      .+++||||+|.||..++..|+++|+       +|++.++++  ++++....++..                   ..+.++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-------------------~~~~~~   65 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-------------------CAFPLL   65 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-------------------TTCTTE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-------------------cccccc
Confidence            4699999999999999999999996       899999875  233322223321                   001111


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                       .|+.+.++..+.+       ...|++||.||...  .+  ..+.   +..+++|+.++..+++++..+-   +...+++
T Consensus        66 -~di~~~~~~~~a~-------~~~D~Vih~Ag~~~--~~--~~~~---~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vv  127 (327)
T 1y7t_A           66 -AGLEATDDPKVAF-------KDADYALLVGAAPR--KA--GMER---RDLLQVNGKIFTEQGRALAEVA---KKDVKVL  127 (327)
T ss_dssp             -EEEEEESCHHHHT-------TTCSEEEECCCCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTCEEE
T ss_pred             -CCeEeccChHHHh-------CCCCEEEECCCcCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhhc---CCCeEEE
Confidence             3555544433332       36899999999854  11  2233   5678999999999888775531   1235788


Q ss_pred             EecCCCC-------CCC-CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc
Q 016493          205 NMDGAGS-------GGS-STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM  254 (388)
Q Consensus       205 ~isS~~~-------~~~-~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~  254 (388)
                      ++|+...       ... +.++...|+.||...+.+...+++.+   |+.+..|+|..
T Consensus       128 v~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~  182 (327)
T 1y7t_A          128 VVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMT  182 (327)
T ss_dssp             ECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCE
T ss_pred             EeCCchhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeE
Confidence            8876521       011 24455679999999999888888776   34444444433

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.90  E-value=2.5e-09  Score=96.80  Aligned_cols=92  Identities=15%  Similarity=0.267  Sum_probs=66.2

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCccc
Q 016493           52 GPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN  115 (388)
Q Consensus        52 ~gk~vlITGa----------------s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~  115 (388)
                      +||+||||||                ||++|.++|+.|+++|++|++++|+.+. ..                       
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-----------------------   57 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-----------------------   57 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-----------------------
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-----------------------
Confidence            5899999999                7889999999999999999999997431 00                       


Q ss_pred             ccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHH
Q 016493          116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE  173 (388)
Q Consensus       116 ~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~  173 (388)
                      ..+..+..  .|+   ++++++.+.+.+.++++|++|+|||+.. +.+....+.+++.
T Consensus        58 ~~~~~~~~--~~v---~s~~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~~  109 (232)
T 2gk4_A           58 EPHPNLSI--REI---TNTKDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEVQ  109 (232)
T ss_dssp             CCCTTEEE--EEC---CSHHHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHHH
T ss_pred             cCCCCeEE--EEH---hHHHHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhhh
Confidence            00112322  233   4567777777788889999999999876 5655544444443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.74  E-value=3.6e-08  Score=78.95  Aligned_cols=75  Identities=21%  Similarity=0.199  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .+++++|+|+ |++|.++++.|.++| ++|++++|++++++...    .                   ..+..+.+|+++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~-------------------~~~~~~~~d~~~   59 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R-------------------MGVATKQVDAKD   59 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T-------------------TTCEEEECCTTC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h-------------------CCCcEEEecCCC
Confidence            3578999999 999999999999999 89999999988765442    1                   235668899999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+++.++++       ++|++|+++|.
T Consensus        60 ~~~~~~~~~-------~~d~vi~~~~~   79 (118)
T 3ic5_A           60 EAGLAKALG-------GFDAVISAAPF   79 (118)
T ss_dssp             HHHHHHHTT-------TCSEEEECSCG
T ss_pred             HHHHHHHHc-------CCCEEEECCCc
Confidence            887776553       68999999964

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.71  E-value=2.5e-11  Score=120.93  Aligned_cols=46  Identities=20%  Similarity=0.258  Sum_probs=40.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   94 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~   94 (388)
                      .+++.||+++|||++ +||+++|+.|++.|++|++++|++.++++..
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            357899999999987 9999999999999999999999987765543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.69  E-value=1.4e-08  Score=86.71  Aligned_cols=78  Identities=14%  Similarity=0.063  Sum_probs=63.0

Q ss_pred             ChHHHHHHHHHHHCCCeEEEEeCChHHHHH---HHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH--HHHHHH
Q 016493           63 RGLGKALAREFLLSGDRVVVASRSSESVRM---TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP--ADVQKL  137 (388)
Q Consensus        63 ~GIG~aiA~~La~~G~~Vil~~R~~~~l~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~--~~v~~~  137 (388)
                      +-++.++++.|++.|++|++..|+.+..++   ..+.+++                 .+.+...+++|++++  ++++++
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-----------------~G~~~~~i~~Dv~~~~~~~v~~~   88 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-----------------AGMDYVYIPVDWQNPKVEDVEAF   88 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-----------------TTCEEEECCCCTTSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-----------------cCCeEEEecCCCCCCCHHHHHHH
Confidence            348899999999999999999887654321   2333332                 356788899999999  999999


Q ss_pred             HHHHHhhcCCccEEEEccccC
Q 016493          138 SNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       138 ~~~i~~~~g~iD~li~nAG~~  158 (388)
                      ++.+.+.+|+ |+||||||+.
T Consensus        89 ~~~i~~~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           89 FAAMDQHKGK-DVLVHCLANY  108 (157)
T ss_dssp             HHHHHHTTTS-CEEEECSBSH
T ss_pred             HHHHHhcCCC-CEEEECCCCC
Confidence            9999998999 9999999973

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.68  E-value=1e-07  Score=93.85  Aligned_cols=82  Identities=17%  Similarity=0.213  Sum_probs=70.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G---~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++++|+|| ||||+++++.|+++|   .+|++++|+.++++++.+++...                .+.++..+.+|++|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~----------------~~~~~~~~~~D~~d   64 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK----------------GYGEIDITTVDADS   64 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT----------------TCCCCEEEECCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh----------------cCCceEEEEecCCC
Confidence            57999999 899999999999999   48999999999998887776542                12357889999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+++++++++.     ++|+||||+|.
T Consensus        65 ~~~l~~~l~~~-----~~DvVin~ag~   86 (405)
T 4ina_A           65 IEELVALINEV-----KPQIVLNIALP   86 (405)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECSCG
T ss_pred             HHHHHHHHHhh-----CCCEEEECCCc
Confidence            99999988865     69999999985

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.60  E-value=5.5e-09  Score=106.35  Aligned_cols=101  Identities=19%  Similarity=0.218  Sum_probs=67.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ++++|+++|||| ||+|+++|+.|+++|++|++++|+.++++++.+++.                    .++.    ++.
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~--------------------~~~~----~~~  415 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG--------------------GKAL----SLT  415 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT--------------------C-CE----ETT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------------------Ccee----eHH
Confidence            467899999999 599999999999999999999999988877655431                    1121    221


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCC----CCCcCCCCHHHHHHHHHhhchHHH
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSI  184 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~----~~~~~~~~~~~~~~~~~vN~~g~~  184 (388)
                      |   ++++      ..+.+|++|||+|+...    ..++.+.+.++++.++++|+.+..
T Consensus       416 d---l~~~------~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          416 D---LDNY------HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             T---TTTC--------CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             H---hhhc------cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            2   1000      11358999999997531    134556667778889999998753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.56  E-value=2.6e-07  Score=81.43  Aligned_cols=79  Identities=16%  Similarity=0.168  Sum_probs=57.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++||||++|||.++++.+...|++|++++|++++++.+.    +                 .+..   ..+|.++.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~-----------------~g~~---~~~d~~~~   93 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----R-----------------LGVE---YVGDSRSV   93 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----T-----------------TCCS---EEEETTCS
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----H-----------------cCCC---EEeeCCcH
Confidence            5899999999999999999999999999999999987664321    1                 1121   12477776


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +..+.+.+...  .+++|++|+|+|
T Consensus        94 ~~~~~~~~~~~--~~~~D~vi~~~g  116 (198)
T 1pqw_A           94 DFADEILELTD--GYGVDVVLNSLA  116 (198)
T ss_dssp             THHHHHHHHTT--TCCEEEEEECCC
T ss_pred             HHHHHHHHHhC--CCCCeEEEECCc
Confidence            54444443321  136999999997

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.55  E-value=7.8e-08  Score=91.97  Aligned_cols=79  Identities=19%  Similarity=0.279  Sum_probs=60.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++||||++|||.++++.+.+.|++|++++|++++++.+ +++                    +..   ..+|.++.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~--------------------g~~---~~~d~~~~  200 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI--------------------GFD---AAFNYKTV  200 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCS---EEEETTSC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc--------------------CCc---EEEecCCH
Confidence            589999999999999999999999999999999998877654 222                    121   23587774


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +++.+.+.++..  +++|++|+|+|
T Consensus       201 ~~~~~~~~~~~~--~~~d~vi~~~g  223 (333)
T 1v3u_A          201 NSLEEALKKASP--DGYDCYFDNVG  223 (333)
T ss_dssp             SCHHHHHHHHCT--TCEEEEEESSC
T ss_pred             HHHHHHHHHHhC--CCCeEEEECCC
Confidence            455555554433  57999999998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.54  E-value=3.2e-08  Score=92.98  Aligned_cols=82  Identities=24%  Similarity=0.373  Sum_probs=61.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++++|+++|||++ |+|+++|+.|+++| +|++++|+.++++++.+++.....                ... .+.+|+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~----------------~~~-~~~~d~  184 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN----------------KKF-GEEVKF  184 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT----------------CCH-HHHEEE
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc----------------ccc-ceeEEE
Confidence            46789999999997 99999999999999 999999999988888777644210                000 112344


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                      ++.          .+.++++|++|||+|...
T Consensus       185 ~~~----------~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          185 SGL----------DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             ECT----------TCCCTTCCEEEECSCTTC
T ss_pred             eeH----------HHhhCCCCEEEECCCCCC
Confidence            441          345678999999999754

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.48  E-value=2.2e-07  Score=92.70  Aligned_cols=78  Identities=21%  Similarity=0.204  Sum_probs=61.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++|+++||| +||+|+++++.|++.|++|++++|+.++++++.+++                     ..+..+.+|++|.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~---------------------~~~~~~~~Dv~d~   59 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------------------QHSTPISLDVNDD   59 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC---------------------TTEEEEECCTTCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc---------------------CCceEEEeecCCH
Confidence            468999998 799999999999999999999999987765432211                     1366788999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      +++.++++       ++|+||||++..
T Consensus        60 ~~l~~~l~-------~~DvVIn~a~~~   79 (450)
T 1ff9_A           60 AALDAEVA-------KHDLVISLIPYT   79 (450)
T ss_dssp             HHHHHHHT-------TSSEEEECCC--
T ss_pred             HHHHHHHc-------CCcEEEECCccc
Confidence            88776653       699999999863

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.46  E-value=3.4e-07  Score=89.04  Aligned_cols=106  Identities=20%  Similarity=0.284  Sum_probs=74.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+++++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+                    +..   +.+|.+
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~--------------------g~~---~~~~~~  218 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF--------------------GGR---VITLTA  218 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------------------TTS---EEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc--------------------Cce---EEEecC
Confidence            478899999999 99999999999999999999999998776543321                    122   456778


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +.+++++.+.       +.|++|+++|.... .                   .+..+.+..++.|+   +++.||++++.
T Consensus       219 ~~~~l~~~~~-------~~DvVi~~~g~~~~-~-------------------~~~li~~~~l~~mk---~gg~iV~v~~~  268 (369)
T 2eez_A          219 TEANIKKSVQ-------HADLLIGAVLVPGA-K-------------------APKLVTRDMLSLMK---EGAVIVDVAVD  268 (369)
T ss_dssp             CHHHHHHHHH-------HCSEEEECCC---------------------------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred             CHHHHHHHHh-------CCCEEEECCCCCcc-c-------------------cchhHHHHHHHhhc---CCCEEEEEecC
Confidence            8777766553       58999999987420 0                   01223456677775   35889999754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.39  E-value=2.6e-06  Score=80.79  Aligned_cols=85  Identities=18%  Similarity=0.251  Sum_probs=64.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ..+++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++...                .+..+  
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~----------------~~~~~--  209 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK----------------TDCKA--  209 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH----------------SSCEE--
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh----------------cCCce--
Confidence            46789999999998 7999999999999998 89999999   88888887777653                11223  


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      ...++.+.+++.+.+.       ..|++||+....
T Consensus       210 ~~~~~~~~~~l~~~l~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          210 QLFDIEDHEQLRKEIA-------ESVIFTNATGVG  237 (315)
T ss_dssp             EEEETTCHHHHHHHHH-------TCSEEEECSSTT
T ss_pred             EEeccchHHHHHhhhc-------CCCEEEECccCC
Confidence            3446666655544332       589999988653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.32  E-value=1.4e-06  Score=83.65  Aligned_cols=80  Identities=18%  Similarity=0.139  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++|+||+||||+++++.+...|++|++++|++++++.+ +++                    +..   ..+|+++.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~--------------------g~~---~~~d~~~~  224 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI--------------------GGE---VFIDFTKE  224 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT--------------------TCC---EEEETTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc--------------------CCc---eEEecCcc
Confidence            589999999999999999999999999999999998876432 221                    121   23488765


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +++.+.+.++.+.  ++|++|+|+|.
T Consensus       225 ~~~~~~~~~~~~~--~~D~vi~~~g~  248 (347)
T 2hcy_A          225 KDIVGAVLKATDG--GAHGVINVSVS  248 (347)
T ss_dssp             SCHHHHHHHHHTS--CEEEEEECSSC
T ss_pred             HhHHHHHHHHhCC--CCCEEEECCCc
Confidence            6666666655443  79999999984

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.32  E-value=1.4e-06  Score=83.14  Aligned_cols=80  Identities=13%  Similarity=0.154  Sum_probs=58.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+. ++                    +..   ..+|.++.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~--------------------g~~---~~~d~~~~  200 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL--------------------GCH---HTINYSTQ  200 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCC---EEEECCCH
Confidence            5899999999999999999999999999999999987766442 22                    111   23477765


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+++.+.. . ..++|++|+|+|.
T Consensus       201 ~~~~~i~~~~-~-~~~~d~vi~~~g~  224 (333)
T 1wly_A          201 DFAEVVREIT-G-GKGVDVVYDSIGK  224 (333)
T ss_dssp             CHHHHHHHHH-T-TCCEEEEEECSCT
T ss_pred             HHHHHHHHHh-C-CCCCeEEEECCcH
Confidence            5444444332 1 1369999999984

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.32  E-value=1.3e-06  Score=87.46  Aligned_cols=80  Identities=18%  Similarity=0.191  Sum_probs=61.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++|+|+|+|+ ||+|+++++.|++. |++|++++|+.++++++.++                      ..+..+.+|
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----------------------~~~~~~~~D   75 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----------------------SGSKAISLD   75 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----------------------GTCEEEECC
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----------------------cCCcEEEEe
Confidence            4567899999997 99999999999998 68999999998877654321                      124557899


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      ++|.+++.++++       ++|+|||+++..
T Consensus        76 ~~d~~~l~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           76 VTDDSALDKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             TTCHHHHHHHHH-------TSSEEEECSCGG
T ss_pred             cCCHHHHHHHHc-------CCCEEEECCchh
Confidence            999888776654       689999999863

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.30  E-value=1.2e-06  Score=83.42  Aligned_cols=79  Identities=10%  Similarity=0.121  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++||||++|||.++++.+...|++|++++|++++++.+.+ +                    +..   ..+|.++.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~--------------------g~~---~~~~~~~~  195 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A--------------------GAW---QVINYREE  195 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--------------------CCC---EEEECCCc
Confidence            58999999999999999999999999999999999887654422 1                    111   23477765


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +..+++.+...  ..++|++|+|+|
T Consensus       196 ~~~~~~~~~~~--~~~~D~vi~~~g  218 (327)
T 1qor_A          196 DLVERLKEITG--GKKVRVVYDSVG  218 (327)
T ss_dssp             CHHHHHHHHTT--TCCEEEEEECSC
T ss_pred             cHHHHHHHHhC--CCCceEEEECCc
Confidence            55554443321  136999999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.29  E-value=7.1e-07  Score=82.99  Aligned_cols=48  Identities=10%  Similarity=0.141  Sum_probs=42.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (388)
                      .++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~  162 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLF  162 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHh
Confidence            4678999999998 79999999999999999999999999887766554

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.25  E-value=6.5e-07  Score=85.87  Aligned_cols=81  Identities=21%  Similarity=0.256  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+.+++                    +..   ..+|.++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~--------------------g~~---~~~d~~~~  211 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF--------------------GFD---DAFNYKEE  211 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS--------------------CCS---EEEETTSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCc---eEEecCCH
Confidence            5899999999999999999999999999999999988775443221                    121   22476665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +++.+.+.++..  +++|++|+|+|.
T Consensus       212 ~~~~~~~~~~~~--~~~d~vi~~~g~  235 (345)
T 2j3h_A          212 SDLTAALKRCFP--NGIDIYFENVGG  235 (345)
T ss_dssp             SCSHHHHHHHCT--TCEEEEEESSCH
T ss_pred             HHHHHHHHHHhC--CCCcEEEECCCH
Confidence            444444444432  479999999973

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.22  E-value=2.2e-06  Score=70.76  Aligned_cols=77  Identities=14%  Similarity=0.249  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++++++|+|+ |++|..+++.|.+.|++|++++|++++.+.+.    +                   .....+..|.++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~-------------------~~~~~~~~d~~~   59 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----S-------------------YATHAVIANATE   59 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----T-------------------TCSEEEECCTTC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H-------------------hCCEEEEeCCCC
Confidence            46788999998 99999999999999999999999976643211    0                   123457789988


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+.++++      ...+.|++|++++.
T Consensus        60 ~~~l~~~------~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           60 ENELLSL------GIRNFEYVIVAIGA   80 (144)
T ss_dssp             HHHHHTT------TGGGCSEEEECCCS
T ss_pred             HHHHHhc------CCCCCCEEEECCCC
Confidence            7655432      13468999999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.22  E-value=1.6e-06  Score=83.60  Aligned_cols=80  Identities=16%  Similarity=0.226  Sum_probs=58.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+ +++                    +..   ..+|.++.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------g~~---~~~~~~~~  217 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL--------------------GAA---AGFNYKKE  217 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCc---EEEecCCh
Confidence            589999999999999999999999999999999998877654 222                    111   23566665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+++.+.. . .+++|++|+|+|.
T Consensus       218 ~~~~~~~~~~-~-~~~~d~vi~~~G~  241 (354)
T 2j8z_A          218 DFSEATLKFT-K-GAGVNLILDCIGG  241 (354)
T ss_dssp             CHHHHHHHHT-T-TSCEEEEEESSCG
T ss_pred             HHHHHHHHHh-c-CCCceEEEECCCc
Confidence            4444433322 1 1369999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.22  E-value=5.6e-06  Score=68.59  Aligned_cols=75  Identities=17%  Similarity=0.345  Sum_probs=59.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++++++|+|+ |.+|.++|+.|.++|++|+++++++++.+++.+                       ..+.++..|.+++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-----------------------~~~~~~~gd~~~~   60 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-----------------------EGFDAVIADPTDE   60 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----------------------TTCEEEECCTTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------------------CCCcEEECCCCCH
Confidence            4578999998 779999999999999999999999887654422                       1256788999998


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +.++++      ...+.|.+|.+.+
T Consensus        61 ~~l~~~------~~~~~d~vi~~~~   79 (141)
T 3llv_A           61 SFYRSL------DLEGVSAVLITGS   79 (141)
T ss_dssp             HHHHHS------CCTTCSEEEECCS
T ss_pred             HHHHhC------CcccCCEEEEecC
Confidence            876653      2246899998776

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.21  E-value=1.4e-06  Score=83.20  Aligned_cols=80  Identities=28%  Similarity=0.301  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+||+||||.++++.+...|++|++++|++++++.+.+++                    +..   ...|..+.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~--------------------g~~---~~~~~~~~  205 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL--------------------GFD---GAIDYKNE  205 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------------------CCS---EEEETTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCC---EEEECCCH
Confidence            5899999999999999999999999999999999988876543322                    121   22466664


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+.+.+..   .+++|++|+|+|.
T Consensus       206 ~~~~~~~~~~---~~~~d~vi~~~g~  228 (336)
T 4b7c_A          206 DLAAGLKREC---PKGIDVFFDNVGG  228 (336)
T ss_dssp             CHHHHHHHHC---TTCEEEEEESSCH
T ss_pred             HHHHHHHHhc---CCCceEEEECCCc
Confidence            4333333322   2479999999984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.19  E-value=2.3e-06  Score=82.49  Aligned_cols=80  Identities=18%  Similarity=0.238  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++|+||+||||.++++.+...|++|++++|++++++.+ +++                    +..   ..+|..+.
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------ga~---~~~d~~~~  225 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN--------------------GAH---EVFNHREV  225 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCS---EEEETTST
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc--------------------CCC---EEEeCCCc
Confidence            589999999999999999999999999999999998877632 221                    121   23577665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+++.+.. . ..++|++|+|+|.
T Consensus       226 ~~~~~~~~~~-~-~~~~D~vi~~~G~  249 (351)
T 1yb5_A          226 NYIDKIKKYV-G-EKGIDIIIEMLAN  249 (351)
T ss_dssp             THHHHHHHHH-C-TTCEEEEEESCHH
T ss_pred             hHHHHHHHHc-C-CCCcEEEEECCCh
Confidence            5444433322 1 1269999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.19  E-value=1.3e-06  Score=84.38  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=56.8

Q ss_pred             CC--CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           52 GP--RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        52 ~g--k~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .|  ++++||||+||||.++++.+...|+ +|++++|++++++.+.+++                    +..   ..+|.
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~--------------------g~~---~~~d~  214 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL--------------------GFD---AAINY  214 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS--------------------CCS---EEEET
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc--------------------CCc---eEEec
Confidence            47  9999999999999999999999999 9999999987765543221                    111   23577


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ++.+..+.+ .+...  +++|++|+|+|
T Consensus       215 ~~~~~~~~~-~~~~~--~~~d~vi~~~G  239 (357)
T 2zb4_A          215 KKDNVAEQL-RESCP--AGVDVYFDNVG  239 (357)
T ss_dssp             TTSCHHHHH-HHHCT--TCEEEEEESCC
T ss_pred             CchHHHHHH-HHhcC--CCCCEEEECCC
Confidence            664333332 22222  26999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.12  E-value=5.7e-06  Score=77.32  Aligned_cols=51  Identities=22%  Similarity=0.307  Sum_probs=46.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEEN  100 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~  100 (388)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++...
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~  174 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence            4688999999998 7999999999999998 7999999999999888887654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.09  E-value=4.5e-06  Score=80.13  Aligned_cols=80  Identities=13%  Similarity=0.212  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|++++||||++|||.++++.+... |++|+++++++++++.+ +++                    +..   ..+|.++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------g~~---~~~~~~~  225 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA--------------------GAD---YVINASM  225 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH--------------------TCS---EEEETTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh--------------------CCC---EEecCCC
Confidence            6899999999999999999999998 99999999998877644 222                    111   1246666


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+..+++.+ +... +++|++|+|+|.
T Consensus       226 ~~~~~~~~~-~~~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          226 QDPLAEIRR-ITES-KGVDAVIDLNNS  250 (347)
T ss_dssp             SCHHHHHHH-HTTT-SCEEEEEESCCC
T ss_pred             ccHHHHHHH-HhcC-CCceEEEECCCC
Confidence            443333222 2111 579999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.07  E-value=2.7e-05  Score=73.72  Aligned_cols=85  Identities=18%  Similarity=0.245  Sum_probs=62.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~---~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ..++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+   .++++++.+++...                .+..+. 
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~----------------~~~~v~-  204 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN----------------TDCVVT-  204 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH----------------SSCEEE-
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc----------------cCcceE-
Confidence            46789999999997 8999999999999998 89999999   88888877777553                122233 


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                       ..+..+.+...+.+.       ..|++||+....
T Consensus       205 -~~~~~~l~~~~~~l~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          205 -VTDLADQHAFTEALA-------SADILTNGTKVG  231 (312)
T ss_dssp             -EEETTCHHHHHHHHH-------HCSEEEECSSTT
T ss_pred             -EechHhhhhhHhhcc-------CceEEEECCcCC
Confidence             345555432222222       479999988664

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.03  E-value=1.2e-05  Score=76.81  Aligned_cols=80  Identities=15%  Similarity=0.300  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++|+||+||||.++++.+...|++|+++++++++++.+ +++                    +..   ...|..+.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------ga~---~~~~~~~~  203 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY--------------------GAE---YLINASKE  203 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc--------------------CCc---EEEeCCCc
Confidence            589999999999999999999999999999999998877633 221                    121   12355554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+.+.+.. . ..++|++++|+|.
T Consensus       204 ~~~~~~~~~~-~-~~g~D~vid~~g~  227 (334)
T 3qwb_A          204 DILRQVLKFT-N-GKGVDASFDSVGK  227 (334)
T ss_dssp             CHHHHHHHHT-T-TSCEEEEEECCGG
T ss_pred             hHHHHHHHHh-C-CCCceEEEECCCh
Confidence            4333333221 1 1369999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.00  E-value=1.1e-05  Score=77.60  Aligned_cols=79  Identities=19%  Similarity=0.181  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+||+||||.++++.+...|++|++++|++++++.+. ++                    +..   ...|..+.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l--------------------Ga~---~~~~~~~~  222 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL--------------------GAK---RGINYRSE  222 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc--------------------CCC---EEEeCCch
Confidence            5899999999999999999999999999999999998876442 22                    111   12456554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+.+.+..   .+++|++|+|+|.
T Consensus       223 ~~~~~~~~~~---~~g~Dvvid~~g~  245 (353)
T 4dup_A          223 DFAAVIKAET---GQGVDIILDMIGA  245 (353)
T ss_dssp             CHHHHHHHHH---SSCEEEEEESCCG
T ss_pred             HHHHHHHHHh---CCCceEEEECCCH
Confidence            4444333322   3579999999984

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.96  E-value=1.6e-05  Score=75.51  Aligned_cols=80  Identities=11%  Similarity=0.114  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++|+||+||+|.++++.+...|++|+++++++++++.+. ++                    +..   ...|.++.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~--------------------Ga~---~~~~~~~~  195 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL--------------------GAW---ETIDYSHE  195 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCC---EEEeCCCc
Confidence            5899999999999999999999999999999999988876442 22                    111   12355554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+++.+.. . ..++|++|+|+|.
T Consensus       196 ~~~~~~~~~~-~-~~g~Dvvid~~g~  219 (325)
T 3jyn_A          196 DVAKRVLELT-D-GKKCPVVYDGVGQ  219 (325)
T ss_dssp             CHHHHHHHHT-T-TCCEEEEEESSCG
T ss_pred             cHHHHHHHHh-C-CCCceEEEECCCh
Confidence            4333333322 1 1369999999985

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.96  E-value=4.2e-05  Score=70.95  Aligned_cols=48  Identities=19%  Similarity=0.278  Sum_probs=43.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (388)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~  162 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERF  162 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            4678999999998 79999999999999999999999999888776655

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.92  E-value=3.3e-05  Score=73.75  Aligned_cols=152  Identities=9%  Similarity=0.095  Sum_probs=95.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCC----hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRS----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  121 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i  121 (388)
                      ..+++||||+|.+|..++..|+.+|.       .|++.+++    +++++....++.+..                 ...
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~-----------------~~~   67 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA-----------------FPL   67 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT-----------------CTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc-----------------ccc
Confidence            45799999999999999999999885       79999998    665655445553310                 001


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 016493          122 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  201 (388)
Q Consensus       122 ~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  201 (388)
                         ..|+...++..+.       +...|++|+.||...  .  ...+.   ...+..|......+++.+..+-   +..+
T Consensus        68 ---~~~i~~~~~~~~a-------l~~aD~Vi~~ag~~~--~--~g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p~a  127 (329)
T 1b8p_A           68 ---LAGMTAHADPMTA-------FKDADVALLVGARPR--G--PGMER---KDLLEANAQIFTVQGKAIDAVA---SRNI  127 (329)
T ss_dssp             ---EEEEEEESSHHHH-------TTTCSEEEECCCCCC--C--TTCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTC
T ss_pred             ---cCcEEEecCcHHH-------hCCCCEEEEeCCCCC--C--CCCCH---HHHHHHHHHHHHHHHHHHHHhc---CCCe
Confidence               1133322222222       236899999999743  1  12233   3457788777766666654431   1357


Q ss_pred             EEEEecCCC-------CCCC-CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 016493          202 HIFNMDGAG-------SGGS-STPLTAVYGSTKCGLRQLQASLFKESK  241 (388)
Q Consensus       202 ~Iv~isS~~-------~~~~-~~~~~~~Y~aSK~al~~l~~~la~el~  241 (388)
                      +++++|...       .... +.|....|+.++.--..+...+++++.
T Consensus       128 ~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          128 KVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             EEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             EEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            899997632       0112 344445688887666667777777775

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.91  E-value=1.6e-05  Score=76.19  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++++|+||+||+|..+++.+...|++|++++|++++++.+. ++                    +...   .+|.++.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~--------------------ga~~---~~d~~~~  221 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL--------------------GADE---TVNYTHP  221 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCSE---EEETTST
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc--------------------CCCE---EEcCCcc
Confidence            5899999999999999999999999999999999988776542 22                    1111   2477664


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +-.+. +.+... ..++|++|+|+|
T Consensus       222 ~~~~~-~~~~~~-~~~~d~vi~~~g  244 (343)
T 2eih_A          222 DWPKE-VRRLTG-GKGADKVVDHTG  244 (343)
T ss_dssp             THHHH-HHHHTT-TTCEEEEEESSC
T ss_pred             cHHHH-HHHHhC-CCCceEEEECCC
Confidence            32222 222211 136999999998

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.91  E-value=2.8e-05  Score=77.26  Aligned_cols=85  Identities=20%  Similarity=0.196  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE--EccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI--ACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~Dls  129 (388)
                      .|++|+|+||+||||.++++.+...|++|+++++++++++.+ +++                    +....+-  ..|+.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l--------------------Ga~~~i~~~~~~~~  278 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL--------------------GCDLVINRAELGIT  278 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCCCEEEHHHHTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc--------------------CCCEEEeccccccc
Confidence            689999999999999999999999999999999998877644 221                    1211111  11221


Q ss_pred             ---------CHHHHHHHHHHHHhhcC-CccEEEEcccc
Q 016493          130 ---------EPADVQKLSNFAVNEFG-SIDIWINNAGT  157 (388)
Q Consensus       130 ---------~~~~v~~~~~~i~~~~g-~iD~li~nAG~  157 (388)
                               +.++++++.+++.+..+ ++|++|+++|.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             TTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             ccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc
Confidence                     12445555666655544 59999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.83  E-value=1.6e-05  Score=76.06  Aligned_cols=80  Identities=14%  Similarity=0.162  Sum_probs=56.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+||++|||..+++.+...|++|+++++++++++.+.+ +                    +...   ..|..+.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l--------------------ga~~---~~~~~~~  199 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L--------------------GAAY---VIDTSTA  199 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H--------------------TCSE---EEETTTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C--------------------CCcE---EEeCCcc
Confidence            58999999999999999999999999999999999988764432 2                    1211   2355554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+++.+.. . ..++|++|+|+|.
T Consensus       200 ~~~~~~~~~~-~-~~g~Dvvid~~g~  223 (340)
T 3gms_A          200 PLYETVMELT-N-GIGADAAIDSIGG  223 (340)
T ss_dssp             CHHHHHHHHT-T-TSCEEEEEESSCH
T ss_pred             cHHHHHHHHh-C-CCCCcEEEECCCC
Confidence            4333333221 1 1369999999985

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.77  E-value=0.0002  Score=58.44  Aligned_cols=75  Identities=17%  Similarity=0.279  Sum_probs=55.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++++|+|+ |.+|..+++.|.+.|++|++++|++++.+++.++                      ..+.++..|.++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----------------------~~~~~~~~d~~~~~   60 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----------------------IDALVINGDCTKIK   60 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------------------CSSEEEESCTTSHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----------------------cCcEEEEcCCCCHH
Confidence            357899987 9999999999999999999999998766543221                      12445778988876


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccc
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      .+.+.      ...+.|++|.+.+
T Consensus        61 ~l~~~------~~~~~d~vi~~~~   78 (140)
T 1lss_A           61 TLEDA------GIEDADMYIAVTG   78 (140)
T ss_dssp             HHHHT------TTTTCSEEEECCS
T ss_pred             HHHHc------CcccCCEEEEeeC
Confidence            54321      1246899999874

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.75  E-value=5e-05  Score=71.41  Aligned_cols=48  Identities=19%  Similarity=0.287  Sum_probs=42.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l   97 (388)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            4678999999997 7999999999999998 9999999998887765543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.74  E-value=0.0001  Score=71.24  Aligned_cols=45  Identities=24%  Similarity=0.250  Sum_probs=40.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   95 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~   95 (388)
                      .+++++|+|+|+ ||+|+++++.+...|++|++++|++++++.+.+
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~  208 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLET  208 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            367899999999 999999999999999999999999988876543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.73  E-value=0.00021  Score=59.92  Aligned_cols=78  Identities=13%  Similarity=0.132  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ..++++|.|+ |.+|..+++.|.+.|++|+++++++ ++.+.+.+..                    ...+.++..|.++
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~--------------------~~~~~~i~gd~~~   60 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL--------------------GDNADVIPGDSND   60 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--------------------CTTCEEEESCTTS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh--------------------cCCCeEEEcCCCC
Confidence            3467888896 9999999999999999999999984 5444332221                    1236778999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ++.++++      ...+.|.+|.+.+
T Consensus        61 ~~~l~~a------~i~~ad~vi~~~~   80 (153)
T 1id1_A           61 SSVLKKA------GIDRCRAILALSD   80 (153)
T ss_dssp             HHHHHHH------TTTTCSEEEECSS
T ss_pred             HHHHHHc------ChhhCCEEEEecC
Confidence            8876543      1236899988875

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.72  E-value=9.8e-05  Score=71.37  Aligned_cols=81  Identities=14%  Similarity=0.182  Sum_probs=57.3

Q ss_pred             hhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           44 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ...++|.-+...|+|.|| |++|+.+|+.|++ .++|.+++|+.++++++.                        ..+..
T Consensus         7 ~~~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~------------------------~~~~~   60 (365)
T 3abi_A            7 HHHHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK------------------------EFATP   60 (365)
T ss_dssp             ---------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT------------------------TTSEE
T ss_pred             cccccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh------------------------ccCCc
Confidence            334444445557999998 9999999998864 589999999988775431                        23455


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+|++|.+++.++++       +.|+|||+++.
T Consensus        61 ~~~d~~d~~~l~~~~~-------~~DvVi~~~p~   87 (365)
T 3abi_A           61 LKVDASNFDKLVEVMK-------EFELVIGALPG   87 (365)
T ss_dssp             EECCTTCHHHHHHHHT-------TCSEEEECCCG
T ss_pred             EEEecCCHHHHHHHHh-------CCCEEEEecCC
Confidence            7899999998877665       57999999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.72  E-value=7.6e-05  Score=71.40  Aligned_cols=42  Identities=17%  Similarity=0.308  Sum_probs=38.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+||+||||.++++.+...|++|+++++++++++.+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  200 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV  200 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999999887543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.69  E-value=5.7e-05  Score=72.96  Aligned_cols=40  Identities=23%  Similarity=0.261  Sum_probs=36.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---HHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS---ESVR   91 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~---~~l~   91 (388)
                      ++|++|+|+|| ||+|..+++.+...|++|+++++++   ++++
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            34999999999 9999999999999999999999998   6654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.68  E-value=0.00013  Score=72.71  Aligned_cols=85  Identities=21%  Similarity=0.271  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE--Ecc--
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI--ACD--  127 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~D--  127 (388)
                      .|++|+|+||+|++|...++.+...|++|+++++++++++.+ +++                    +....+-  ..|  
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l--------------------Ga~~vi~~~~~d~~  286 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM--------------------GAEAIIDRNAEGYR  286 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH--------------------TCCEEEETTTTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh--------------------CCcEEEecCcCccc
Confidence            589999999999999999999999999999999988887644 222                    1111110  111  


Q ss_pred             ------CCCHHHHHHHHHHHHhhcC--CccEEEEcccc
Q 016493          128 ------VCEPADVQKLSNFAVNEFG--SIDIWINNAGT  157 (388)
Q Consensus       128 ------ls~~~~v~~~~~~i~~~~g--~iD~li~nAG~  157 (388)
                            .++.++++++.+.+.+..+  ++|++|.++|.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          287 FWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             SEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             ccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence                  2456667777777766543  69999999984

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.67  E-value=9.1e-05  Score=71.01  Aligned_cols=80  Identities=18%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+++++|+||+||||..+++.+...|++|+++++++++++.+. ++                    +..   ...|..+.
T Consensus       164 g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~--------------------Ga~---~~~~~~~~  219 (349)
T 3pi7_A          164 GEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI--------------------GAA---HVLNEKAP  219 (349)
T ss_dssp             CCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH--------------------TCS---EEEETTST
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCC---EEEECCcH
Confidence            3489999999999999999999999999999999998876542 22                    111   12355554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +-.+.+.+....  .++|++++++|.
T Consensus       220 ~~~~~v~~~~~~--~g~D~vid~~g~  243 (349)
T 3pi7_A          220 DFEATLREVMKA--EQPRIFLDAVTG  243 (349)
T ss_dssp             THHHHHHHHHHH--HCCCEEEESSCH
T ss_pred             HHHHHHHHHhcC--CCCcEEEECCCC
Confidence            333333332221  269999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.65  E-value=0.00063  Score=64.69  Aligned_cols=114  Identities=16%  Similarity=0.158  Sum_probs=69.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+++||||+|.+|..++..|+.+|  .+|++.+++++  +....++....               ...++..    +.+.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~---------------~~~~v~~----~~~t   67 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD---------------TGAVVRG----FLGQ   67 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC---------------SSCEEEE----EESH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc---------------ccceEEE----EeCC
Confidence            479999999999999999999999  78999998876  22223332200               0112222    2223


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      ++..+.+       ...|++|++||...  .+  ..+.   ...+.+|+.....+.+.+..+    ...+.|+++
T Consensus        68 ~d~~~al-------~gaDvVi~~ag~~~--~~--g~~r---~dl~~~N~~~~~~i~~~i~~~----~p~~~viv~  124 (326)
T 1smk_A           68 QQLEAAL-------TGMDLIIVPAGVPR--KP--GMTR---DDLFKINAGIVKTLCEGIAKC----CPRAIVNLI  124 (326)
T ss_dssp             HHHHHHH-------TTCSEEEECCCCCC--CS--SCCC---SHHHHHHHHHHHHHHHHHHHH----CTTSEEEEC
T ss_pred             CCHHHHc-------CCCCEEEEcCCcCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhh----CCCeEEEEE
Confidence            3433332       36899999999743  21  1111   244778888777776666543    223455554

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.65  E-value=0.00021  Score=66.62  Aligned_cols=50  Identities=10%  Similarity=0.201  Sum_probs=44.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~   98 (388)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++.
T Consensus       121 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~  171 (281)
T 3o8q_A          121 QVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA  171 (281)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh
Confidence            35789999999998 7999999999999996 99999999999888777663

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.63  E-value=0.00019  Score=68.46  Aligned_cols=77  Identities=22%  Similarity=0.223  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+|| ||+|..+++.+...|++|++++|++++++.+. ++                    +..   ..+|.++.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l--------------------Ga~---~~~d~~~~  218 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL--------------------GAD---LVVNPLKE  218 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT--------------------TCS---EEECTTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC--------------------CCC---EEecCCCc
Confidence            5899999999 88999999999999999999999988876432 11                    121   12466654


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      + +.+.+.+..   +++|++|+++|.
T Consensus       219 ~-~~~~~~~~~---~~~d~vid~~g~  240 (339)
T 1rjw_A          219 D-AAKFMKEKV---GGVHAAVVTAVS  240 (339)
T ss_dssp             C-HHHHHHHHH---SSEEEEEESSCC
T ss_pred             c-HHHHHHHHh---CCCCEEEECCCC
Confidence            3 222222222   579999999984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.60  E-value=0.00014  Score=70.13  Aligned_cols=42  Identities=17%  Similarity=0.162  Sum_probs=38.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++++|+||+||+|..+++.+...|++|++++|++++++.+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~  204 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL  204 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            589999999999999999999999999999999998776543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.60  E-value=0.00012  Score=71.13  Aligned_cols=78  Identities=18%  Similarity=0.189  Sum_probs=58.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++|++++|+|+ |+||+++++.+...|++|++.+|++++++.+.+.+                    +..+   .+|..
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~--------------------g~~~---~~~~~  220 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF--------------------CGRI---HTRYS  220 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------------------TTSS---EEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc--------------------CCee---EeccC
Confidence            578999999998 99999999999999999999999998876543322                    1222   23444


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      +.+++.+.+.       +.|++|++++..
T Consensus       221 ~~~~l~~~l~-------~aDvVi~~~~~p  242 (377)
T 2vhw_A          221 SAYELEGAVK-------RADLVIGAVLVP  242 (377)
T ss_dssp             CHHHHHHHHH-------HCSEEEECCCCT
T ss_pred             CHHHHHHHHc-------CCCEEEECCCcC
Confidence            5555554432       589999999863

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.59  E-value=0.00022  Score=68.20  Aligned_cols=42  Identities=19%  Similarity=0.313  Sum_probs=38.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+||+|++|...++.+...|++|+++++++++++.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT  191 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999998876544

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.55  E-value=0.00017  Score=66.01  Aligned_cols=85  Identities=16%  Similarity=0.200  Sum_probs=63.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHHhhhhhh
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMA  107 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~  107 (388)
                      +.++++++|+|.|+ ||+|.++|+.|++.|. ++.+++++.                   .+.+.+.+.+.+..+     
T Consensus        26 q~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-----   99 (249)
T 1jw9_B           26 QEALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-----   99 (249)
T ss_dssp             HHHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred             HHHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-----
Confidence            34567799999996 7999999999999996 899999998                   788888777766432     


Q ss_pred             cCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                                ..++..+..++++ +.+.+++       ...|++|.+..
T Consensus       100 ----------~~~v~~~~~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          100 ----------HIAITPVNALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             ----------TSEEEEECSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             ----------CcEEEEEeccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence                      2456677766753 3333332       26899998764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.53  E-value=0.00018  Score=60.45  Aligned_cols=79  Identities=19%  Similarity=0.190  Sum_probs=56.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +..+++++|.|+ |.+|..+++.|.+.|++|++++|++++++.+..                      ......+..|.+
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------------------~~g~~~~~~d~~   72 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------------------EFSGFTVVGDAA   72 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------------------TCCSEEEESCTT
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------------------cCCCcEEEecCC
Confidence            456789999996 999999999999999999999999876542210                      112345678888


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+.+.+.      ...+.|++|.+.+.
T Consensus        73 ~~~~l~~~------~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           73 EFETLKEC------GMEKADMVFAFTND   94 (155)
T ss_dssp             SHHHHHTT------TGGGCSEEEECSSC
T ss_pred             CHHHHHHc------CcccCCEEEEEeCC
Confidence            76544321      12368999998763

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.51  E-value=0.00012  Score=68.85  Aligned_cols=98  Identities=16%  Similarity=0.185  Sum_probs=62.0

Q ss_pred             CCCCe-EEEEcCCC-----------------h-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-----HHHHHHhhhhh
Q 016493           51 AGPRN-VVITGSTR-----------------G-LGKALAREFLLSGDRVVVASRSSESVRMTVT-----ELEENLKEGMM  106 (388)
Q Consensus        51 ~~gk~-vlITGas~-----------------G-IG~aiA~~La~~G~~Vil~~R~~~~l~~~~~-----~l~~~~~~~~~  106 (388)
                      +.||. ||||+|..                 | +|.++|+.++++|+.|+++.+... +.....     .+.+...    
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~----  108 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALR----  108 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCE----
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhc----
Confidence            57787 99998865                 6 999999999999999999988532 110000     0000000    


Q ss_pred             hcCCCCcccccCceEEEEEccCCCHHHHHHHHHHH------------------------------HhhcCCccEEEEccc
Q 016493          107 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFA------------------------------VNEFGSIDIWINNAG  156 (388)
Q Consensus       107 ~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i------------------------------~~~~g~iD~li~nAG  156 (388)
                       .     ....+..+..+..|+.+.+++.+.+...                              .+.+++.|++|.+|+
T Consensus       109 -~-----~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAA  182 (313)
T 1p9o_A          109 -P-----SGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAA  182 (313)
T ss_dssp             -E-----CCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSB
T ss_pred             -c-----ccccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCc
Confidence             0     0001123445677777766666665433                              244678999999999


Q ss_pred             cCC
Q 016493          157 TNK  159 (388)
Q Consensus       157 ~~~  159 (388)
                      +..
T Consensus       183 VsD  185 (313)
T 1p9o_A          183 VSD  185 (313)
T ss_dssp             CCS
T ss_pred             hhh
Confidence            976

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.49  E-value=0.00019  Score=67.31  Aligned_cols=42  Identities=21%  Similarity=0.290  Sum_probs=38.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++++|+||+||+|..+++.+...|++|+.++|++++++.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999998877543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.49  E-value=0.00022  Score=68.20  Aligned_cols=40  Identities=23%  Similarity=0.375  Sum_probs=35.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .|++|+|+||+|++|..+++.+...|++|+++ +++++++.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~  189 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY  189 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH
Confidence            58999999999999999999999999999998 77776553

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.48  E-value=0.0002  Score=61.84  Aligned_cols=79  Identities=15%  Similarity=0.184  Sum_probs=58.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++.+++++|.|+ |.+|..+|+.|.+. |++|++++|++++.+.+.    +                   ..+.++..|
T Consensus        35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~-------------------~g~~~~~gd   90 (183)
T 3c85_A           35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----S-------------------EGRNVISGD   90 (183)
T ss_dssp             BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----H-------------------TTCCEEECC
T ss_pred             cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----H-------------------CCCCEEEcC
Confidence            3566778999985 89999999999999 999999999988765432    2                   124456789


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      .++.+.+.++     ....+.|++|.+.+
T Consensus        91 ~~~~~~l~~~-----~~~~~ad~vi~~~~  114 (183)
T 3c85_A           91 ATDPDFWERI-----LDTGHVKLVLLAMP  114 (183)
T ss_dssp             TTCHHHHHTB-----CSCCCCCEEEECCS
T ss_pred             CCCHHHHHhc-----cCCCCCCEEEEeCC
Confidence            9887654432     01246899998775

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.46  E-value=0.00057  Score=63.83  Aligned_cols=94  Identities=14%  Similarity=0.127  Sum_probs=69.4

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh------------------HHHHHHHHHHHHHHhhhhh
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS------------------ESVRMTVTELEENLKEGMM  106 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~------------------~~l~~~~~~l~~~~~~~~~  106 (388)
                      +.+.++++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                  .|.+.+.+.+++..     
T Consensus        29 ~~q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-----  102 (292)
T 3h8v_A           29 SDYEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-----  102 (292)
T ss_dssp             ---CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-----
T ss_pred             HHHHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-----
Confidence            3455678899999997 8999999999999995 899999876                  56666666666543     


Q ss_pred             hcCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhh----cCCccEEEEcc
Q 016493          107 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNE----FGSIDIWINNA  155 (388)
Q Consensus       107 ~~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~----~g~iD~li~nA  155 (388)
                                +..++..+..++++.+.++.+++.+...    ..+.|++|.+.
T Consensus       103 ----------P~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          103 ----------PDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             ----------TTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ----------CCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence                      3467888888898877777776544221    13689998766

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.46  E-value=0.0017  Score=61.35  Aligned_cols=151  Identities=15%  Similarity=0.128  Sum_probs=87.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASR--SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R--~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++||||+|.+|..++..|+.+|.  .+++.++  ++++++....++......             .+..+.....|  |
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~-------------~~~~~~i~~~~--d   66 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAG-------------TRSDANIYVES--D   66 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTT-------------SCCCCEEEEEE--T
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHh-------------cCCCeEEEeCC--c
Confidence            589999999999999999999884  6889998  776665555555442110             11122222111  1


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                        ++.       +.+...|++|+.||...  .+  ..+.   ...++.|+.....+++.+..+    . .+.++++|...
T Consensus        67 --~l~-------~al~gaD~Vi~~Ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~-~~~vlv~SNPv  125 (313)
T 1hye_A           67 --ENL-------RIIDESDVVIITSGVPR--KE--GMSR---MDLAKTNAKIVGKYAKKIAEI----C-DTKIFVITNPV  125 (313)
T ss_dssp             --TCG-------GGGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHH----C-CCEEEECSSSH
T ss_pred             --chH-------HHhCCCCEEEECCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecCcH
Confidence              111       12346999999999743  11  2232   345888888877777666543    3 44565554321


Q ss_pred             C-------CCCCCCCchhhHH-HHHHHHHHHHHHHHHhC
Q 016493          211 S-------GGSSTPLTAVYGS-TKCGLRQLQASLFKESK  241 (388)
Q Consensus       211 ~-------~~~~~~~~~~Y~a-SK~al~~l~~~la~el~  241 (388)
                      .       ...+.|....++. +..-...+...+++.+.
T Consensus       126 ~~~t~~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          126 DVMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             HHHHHHHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            0       0012333344554 45445556666666664

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.42  E-value=0.00072  Score=55.79  Aligned_cols=73  Identities=16%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++++|.|+ |.+|..+|+.|.++|++|+++++++++.+++.+                       ..+.++..|.++++.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-----------------------~g~~~i~gd~~~~~~   63 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-----------------------RGVRAVLGNAANEEI   63 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----------------------TTCEEEESCTTSHHH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----------------------cCCCEEECCCCCHHH
Confidence            46788887 789999999999999999999999987765422                       235668899999886


Q ss_pred             HHHHHHHHHhhcCCccEEEEccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ++++      ...+.|.+|.+.+
T Consensus        64 l~~a------~i~~ad~vi~~~~   80 (140)
T 3fwz_A           64 MQLA------HLECAKWLILTIP   80 (140)
T ss_dssp             HHHT------TGGGCSEEEECCS
T ss_pred             HHhc------CcccCCEEEEECC
Confidence            6543      1236799988775

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.40  E-value=0.00023  Score=68.69  Aligned_cols=75  Identities=20%  Similarity=0.224  Sum_probs=55.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+|+ |++|..+++.+...|++|+++++++++++.+.+++                    +..   ...|..+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l--------------------Ga~---~v~~~~~~  242 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF--------------------GAD---SFLVSRDQ  242 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS--------------------CCS---EEEETTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------------------CCc---eEEeccCH
Confidence            6899999996 99999999999999999999999988876543221                    222   12466665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+++       ..+++|++|+++|.
T Consensus       243 ~~~~~-------~~~~~D~vid~~g~  261 (366)
T 1yqd_A          243 EQMQA-------AAGTLDGIIDTVSA  261 (366)
T ss_dssp             HHHHH-------TTTCEEEEEECCSS
T ss_pred             HHHHH-------hhCCCCEEEECCCc
Confidence            43332       22579999999986

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.37  E-value=0.0038  Score=58.65  Aligned_cols=113  Identities=12%  Similarity=0.110  Sum_probs=70.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASR--SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R--~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++||||+|.+|..++..|+.+|.  ++++.++  ++++++....++.+...              ....+.... |  +
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~--------------~~~~~~v~~-~--~   64 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--------------YDSNTRVRQ-G--G   64 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--------------TTCCCEEEE-C--C
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh--------------hCCCcEEEe-C--C
Confidence            589999999999999999999885  6899999  87776655555544211              011222222 2  2


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      .+.           +...|++|+.||...  .+  ..+.+   ..+..|+.....+.+.    +++....+.|+++
T Consensus        65 ~~a-----------~~~aDvVi~~ag~~~--~~--g~~r~---dl~~~N~~i~~~i~~~----i~~~~p~~~viv~  118 (303)
T 1o6z_A           65 YED-----------TAGSDVVVITAGIPR--QP--GQTRI---DLAGDNAPIMEDIQSS----LDEHNDDYISLTT  118 (303)
T ss_dssp             GGG-----------GTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHHHHHHHH----HHTTCSCCEEEEC
T ss_pred             HHH-----------hCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHH----HHHHCCCcEEEEe
Confidence            222           236899999999743  11  22332   3477777766555554    4544334555554

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.34  E-value=0.00039  Score=64.41  Aligned_cols=49  Identities=24%  Similarity=0.306  Sum_probs=43.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l   97 (388)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++
T Consensus       115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~  164 (272)
T 3pwz_A          115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNEL  164 (272)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH
T ss_pred             CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence            35788999999998 6999999999999996 9999999999988877665

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.32  E-value=0.0058  Score=57.95  Aligned_cols=119  Identities=19%  Similarity=0.152  Sum_probs=77.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ...+.+.|+|+ |.+|.++|..|+..|.  +|++.++++++++..+.+|....+-             .+..+.....| 
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~-------------~~~~v~i~~~~-   67 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAF-------------APQPVKTSYGT-   67 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------SSSCCEEEEEC-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcccc-------------ccCCeEEEeCc-
Confidence            34678999996 9999999999999996  8999999999988877777664221             11122322222 


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                        .+           .+...|++|..||...  .+  ..+.   ...++.|..    +++.+.+.+.+....+.++++|-
T Consensus        68 --~~-----------a~~~aDvVvi~ag~p~--kp--G~~R---~dL~~~N~~----Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           68 --YE-----------DCKDADIVCICAGANQ--KP--GETR---LELVEKNLK----IFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             --GG-----------GGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHH----HHHHHHHHHHHTTCCSEEEECSS
T ss_pred             --HH-----------HhCCCCEEEEecccCC--CC--CccH---HHHHHHHHH----HHHHHHHHHHHhcCCeEEEEcCC
Confidence              11           2236899999999743  22  2232   234555543    34555555655545677877753

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.30  E-value=0.00038  Score=67.30  Aligned_cols=76  Identities=17%  Similarity=0.222  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+||+|++|..+++.+...|++|++++ ++++++.+ +++                    +...   ..|..+.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l--------------------Ga~~---v~~~~~~  237 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL--------------------GADD---VIDYKSG  237 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT--------------------TCSE---EEETTSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc--------------------CCCE---EEECCch
Confidence            689999999999999999999999999999888 45554432 221                    2221   2355543


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +-.+    ++.+ .+++|++|+++|.
T Consensus       238 ~~~~----~~~~-~~g~D~vid~~g~  258 (375)
T 2vn8_A          238 SVEE----QLKS-LKPFDFILDNVGG  258 (375)
T ss_dssp             CHHH----HHHT-SCCBSEEEESSCT
T ss_pred             HHHH----HHhh-cCCCCEEEECCCC
Confidence            3222    2222 2579999999985

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.28  E-value=0.006  Score=56.52  Aligned_cols=46  Identities=20%  Similarity=0.253  Sum_probs=39.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      -++|.|.|+ |.+|..+|+.|++.|++|++.+|+++++++..+.+.+
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~   49 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEG   49 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHH
Confidence            367888886 7899999999999999999999999998887776544

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.27  E-value=0.00023  Score=59.10  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=38.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (388)
                      +++++|.|+ |++|..+++.|.+.|++|++.+|++++.+++.+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            899999996 99999999999999999999999999887665543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.17  E-value=0.00055  Score=65.47  Aligned_cols=41  Identities=27%  Similarity=0.258  Sum_probs=37.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|..+++.+...|+ +|++++|++++++.+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~  208 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA  208 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            7899999999 9999999999999999 999999998876543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.17  E-value=0.001  Score=65.14  Aligned_cols=46  Identities=24%  Similarity=0.394  Sum_probs=40.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE   96 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~   96 (388)
                      ++.|++++|.|+ |++|..+++.|...|+ +|++++|+.+++++..++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~  210 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD  210 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            478999999998 9999999999999998 899999999887655544

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.17  E-value=0.003  Score=60.63  Aligned_cols=83  Identities=12%  Similarity=0.059  Sum_probs=58.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|++|+|+|+ |++|...++.+...|++ |+++++++++++.+. ++ .                   ..+..+..|-.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~-------------------~~~~~~~~~~~~  236 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C-------------------PEVVTHKVERLS  236 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C-------------------TTCEEEECCSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c-------------------hhcccccccccc
Confidence            5899999998 99999999988899997 999999988876442 22 1                   223344555555


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+++.+.+.+... ..++|+++.++|.
T Consensus       237 ~~~~~~~v~~~t~-g~g~Dvvid~~g~  262 (363)
T 3m6i_A          237 AEESAKKIVESFG-GIEPAVALECTGV  262 (363)
T ss_dssp             HHHHHHHHHHHTS-SCCCSEEEECSCC
T ss_pred             hHHHHHHHHHHhC-CCCCCEEEECCCC
Confidence            5555444433321 1369999999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.16  E-value=0.0037  Score=59.34  Aligned_cols=118  Identities=17%  Similarity=0.230  Sum_probs=71.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +..++.+.|+|+ |++|.++|..|+..|.  +|++.++++++++....++....+-             . ..+....- 
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------------~-~~~~i~~~-   69 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPF-------------T-SPKKIYSA-   69 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------S-CCCEEEEC-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhh-------------c-CCcEEEEC-
Confidence            456788999997 9999999999999986  8999999999888777777553210             0 12222222 


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                        +.+           .+...|++|..||...  .+  ..   .-...++.|.-    +.+.+.+.+.+....+.++++|
T Consensus        70 --~~~-----------a~~~aDiVvi~ag~~~--kp--G~---tR~dL~~~N~~----I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           70 --EYS-----------DAKDADLVVITAGAPQ--KP--GE---TRLDLVNKNLK----ILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             --CGG-----------GGTTCSEEEECCCCC---------------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             --cHH-----------HhcCCCEEEECCCCCC--CC--Cc---hHHHHHHHHHH----HHHHHHHHHHhcCCceEEEEcc
Confidence              222           2346899999999743  21  11   12344555543    4455566666665567777775

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.12  E-value=0.0014  Score=58.31  Aligned_cols=73  Identities=21%  Similarity=0.167  Sum_probs=57.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      .++|.|+ |.+|..+|+.|.++|++|+++++++++.+++.++                      ..+.++..|.++++.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----------------------~~~~~i~gd~~~~~~l   58 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----------------------LKATIIHGDGSHKEIL   58 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----------------------SSSEEEESCTTSHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----------------------cCCeEEEcCCCCHHHH
Confidence            4889996 8899999999999999999999999887654322                      1356789999998776


Q ss_pred             HHHHHHHHhhcCCccEEEEccc
Q 016493          135 QKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +++      ...+.|++|.+.+
T Consensus        59 ~~a------~i~~ad~vi~~~~   74 (218)
T 3l4b_C           59 RDA------EVSKNDVVVILTP   74 (218)
T ss_dssp             HHH------TCCTTCEEEECCS
T ss_pred             Hhc------CcccCCEEEEecC
Confidence            543      1246899987764

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.11  E-value=0.001  Score=64.09  Aligned_cols=40  Identities=28%  Similarity=0.295  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .|++|+|+| +|++|...++.+...|++|+++++++++++.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  228 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR  228 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH
Confidence            589999999 7999999999999999999999999888765

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.08  E-value=0.00047  Score=65.80  Aligned_cols=39  Identities=23%  Similarity=0.312  Sum_probs=35.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   91 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~   91 (388)
                      .|++|+|+|| |++|..+++.+...|+ +|+.+++++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~  203 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA  203 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            7899999999 9999999999889999 9999999987654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.05  E-value=0.00074  Score=63.89  Aligned_cols=39  Identities=21%  Similarity=0.280  Sum_probs=35.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +|+|+||+||+|..+++.+...|++|+.+++++++++.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999999999999999999998877544

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.04  E-value=0.0047  Score=58.99  Aligned_cols=41  Identities=20%  Similarity=0.216  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  208 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA  208 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            5899999997 8999999998888999999999998877543

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.03  E-value=0.0026  Score=60.47  Aligned_cols=78  Identities=23%  Similarity=0.240  Sum_probs=55.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ..|++|+|+|+ |++|...++.+...|++|+.+++++++++.+ +++                    +...   ..|..+
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l--------------------Ga~~---~i~~~~  219 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL--------------------GAEV---AVNARD  219 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT--------------------TCSE---EEETTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc--------------------CCCE---EEeCCC
Confidence            36899999997 8999999999999999999999999887643 221                    2221   235555


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+..+.+.    +..+++|++|.++|.
T Consensus       220 ~~~~~~~~----~~~g~~d~vid~~g~  242 (340)
T 3s2e_A          220 TDPAAWLQ----KEIGGAHGVLVTAVS  242 (340)
T ss_dssp             SCHHHHHH----HHHSSEEEEEESSCC
T ss_pred             cCHHHHHH----HhCCCCCEEEEeCCC
Confidence            33333322    234689999999874

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.00  E-value=0.00015  Score=67.49  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=38.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            4678999999997 7999999999999998 89999999887543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.99  E-value=0.0022  Score=61.91  Aligned_cols=79  Identities=13%  Similarity=0.188  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++                    +..   ...|..+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l--------------------Ga~---~vi~~~~  246 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF--------------------GAT---DFVNPND  246 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT--------------------TCC---EEECGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh--------------------CCc---eEEeccc
Confidence            5899999996 8999999999888999 8999999998876432 21                    221   1234443


Q ss_pred             -HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 -PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 -~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                       .+++.+.+.++..  +++|++|+++|.
T Consensus       247 ~~~~~~~~~~~~~~--~g~D~vid~~g~  272 (374)
T 1cdo_A          247 HSEPISQVLSKMTN--GGVDFSLECVGN  272 (374)
T ss_dssp             CSSCHHHHHHHHHT--SCBSEEEECSCC
T ss_pred             cchhHHHHHHHHhC--CCCCEEEECCCC
Confidence             1234444443332  479999999984

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.97  E-value=0.0016  Score=62.54  Aligned_cols=39  Identities=15%  Similarity=0.088  Sum_probs=34.4

Q ss_pred             CC-CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 016493           52 GP-RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   90 (388)
Q Consensus        52 ~g-k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l   90 (388)
                      .| ++|+|+||+|++|...++.+...|++|++++++.+++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~  205 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL  205 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcccc
Confidence            47 9999999999999999988888999999998877653

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.97  E-value=0.0065  Score=58.13  Aligned_cols=40  Identities=20%  Similarity=0.193  Sum_probs=35.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  211 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK  211 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            5899999996 8999999998888999 89999999887654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.0033  Score=60.78  Aligned_cols=41  Identities=24%  Similarity=0.294  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+| +|++|...++.+...| ++|+++++++++++.+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  236 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA  236 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence            589999999 8999999999988999 5999999998877543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.96  E-value=0.0014  Score=62.64  Aligned_cols=117  Identities=9%  Similarity=0.075  Sum_probs=71.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++.|.|+|++|.+|..+|..++.+|  .+|++.++++++++....++.....              ...++.+ .   +
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--------------~~~~i~~-t---~   68 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--------------EGLNLTF-T---S   68 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--------------TTCCCEE-E---S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--------------CCCceEE-c---C
Confidence            45789999999999999999999999  4899999999988877777755210              1112221 1   1


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE-EEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH-IFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~-Iv~is  207 (388)
                      |..   +.       +...|++|.+||...  .+  ..+   -...++.|..-    .+.+.+.+.+....+. ++++|
T Consensus        69 d~~---~a-------l~dADvVvitaG~p~--kp--G~~---R~dLl~~N~~I----~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           69 DIK---EA-------LTDAKYIVSSGGAPR--KE--GMT---REDLLKGNAEI----AAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CHH---HH-------HTTEEEEEECCC-----------C---HHHHHHHHHHH----HHHHHHHHHHHCTTCCEEEECS
T ss_pred             CHH---HH-------hCCCCEEEEccCCCC--CC--CCC---HHHHHHHHHHH----HHHHHHHHHHhccCcEEEEEec
Confidence            221   11       136899999999743  21  122   23445666544    4455555555444564 66664

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.95  E-value=0.0024  Score=61.50  Aligned_cols=42  Identities=14%  Similarity=0.238  Sum_probs=35.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~-~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+||+|++|...++.+.. .|++|+.+++++++++.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            588999999999999988876655 589999999998877543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.93  E-value=0.014  Score=54.97  Aligned_cols=121  Identities=17%  Similarity=0.193  Sum_probs=74.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC--hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      |+.+.+.+.|+|+ |.+|..+|..|+..|. +|++.+++  +++++....++....+-.           ....++.. .
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~-----------~~~~~i~~-t   70 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQ-----------GFDANIIG-T   70 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHH-----------TCCCCEEE-E
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhc-----------cCCCEEEE-c
Confidence            3456788999997 9999999999999998 99999999  566665555554432100           01122322 1


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      .|   .+           .+...|++|..+|...  .|  ..+.   ...++.|..-    .+.+.+.+.+....+.+++
T Consensus        71 ~d---~~-----------a~~~aDvVIiaag~p~--kp--g~~R---~dl~~~N~~i----~~~i~~~i~~~~p~a~vlv  125 (315)
T 3tl2_A           71 SD---YA-----------DTADSDVVVITAGIAR--KP--GMSR---DDLVATNSKI----MKSITRDIAKHSPNAIIVV  125 (315)
T ss_dssp             SC---GG-----------GGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHH----HHHHHHHHHHHCTTCEEEE
T ss_pred             CC---HH-----------HhCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEE
Confidence            12   22           2347899999999843  22  2333   3345555544    4444555544435677777


Q ss_pred             ec
Q 016493          206 MD  207 (388)
Q Consensus       206 is  207 (388)
                      +|
T Consensus       126 vs  127 (315)
T 3tl2_A          126 LT  127 (315)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0032  Score=60.39  Aligned_cols=41  Identities=20%  Similarity=0.290  Sum_probs=36.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|| |++|...++.+... |++|+.+++++++++.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~  227 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA  227 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            5899999999 89999999888888 99999999998877643

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.88  E-value=0.0024  Score=58.32  Aligned_cols=85  Identities=15%  Similarity=0.192  Sum_probs=60.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHHhhhhhh
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMA  107 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~  107 (388)
                      +.++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .|.+.+.+.+++..+     
T Consensus        23 q~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-----   96 (251)
T 1zud_1           23 QQKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP-----   96 (251)
T ss_dssp             HHHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred             HHHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC-----
Confidence            34567899999997 7899999999999996 788887653                   566777777765432     


Q ss_pred             cCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                                ..++..+..++++ +.+.++++       ..|++|++..
T Consensus        97 ----------~~~v~~~~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1           97 ----------DIQLTALQQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ----------TSEEEEECSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             ----------CCEEEEEeccCCH-HHHHHHHh-------cCCEEEECCC
Confidence                      3556666666653 44444433       4799998753

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.86  E-value=0.0029  Score=60.96  Aligned_cols=41  Identities=12%  Similarity=0.216  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|..+++.+...|+ +|+.+++++++++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  232 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA  232 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5899999995 8999999999889999 899999999887643

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.84  E-value=0.0036  Score=59.52  Aligned_cols=51  Identities=14%  Similarity=0.283  Sum_probs=41.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENL  101 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~  101 (388)
                      ++++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .|.+.+.+.+++..
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~in  101 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF  101 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhC
Confidence            567899999997 8999999999999996 788988754                   46666667666643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.84  E-value=0.0041  Score=60.80  Aligned_cols=43  Identities=21%  Similarity=0.138  Sum_probs=38.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .+.|++|+|+|+ |.+|+.+++.+...|++|++++|++++++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367999999996 8999999999999999999999999887654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.83  E-value=0.023  Score=53.05  Aligned_cols=115  Identities=16%  Similarity=0.196  Sum_probs=73.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|+|+ |.+|.++|..|+..|.  +|++.++++++++....++.......           ....++.. ..|   .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~-----------~~~~~i~~-t~d---~~   65 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI-----------DKYPKIVG-GAD---YS   65 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT-----------TCCCEEEE-ESC---GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc-----------CCCCEEEE-eCC---HH
Confidence            4789999 9999999999999997  89999999988775555554432110           01122221 112   22


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      .           +..-|++|..+|...  .+  ..+..   ..++.|    ..+++.+.+.+.+....+.++++|
T Consensus        66 a-----------~~~aDiVViaag~~~--kp--G~~R~---dl~~~N----~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           66 L-----------LKGSEIIVVTAGLAR--KP--GMTRL---DLAHKN----AGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             G-----------GTTCSEEEECCCCCC--CS--SCCHH---HHHHHH----HHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             H-----------hCCCCEEEECCCCCC--CC--CCcHH---HHHHHH----HHHHHHHHHHHHhhCCCeEEEEeC
Confidence            2           236899999999753  21  23333   334555    345666777777765667787775

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.83  E-value=0.012  Score=55.83  Aligned_cols=118  Identities=19%  Similarity=0.229  Sum_probs=73.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +.+.+.|+|+ |.+|.++|..|+..|. +|++.++++++++....++.......           ....++.. ..|   
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~-----------~~~~~v~~-t~d---   69 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVD-----------GFDAKFTG-AND---   69 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHH-----------TCCCCEEE-ESS---
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhc-----------CCCCEEEE-eCC---
Confidence            4567999998 9999999999999998 99999999998876666665532210           01122321 122   


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      .+           .+..-|++|..+|...  .+  ..+.   ...+..|.    .+.+.+.+.+.+....+.++++|
T Consensus        70 ~~-----------a~~~aDiVIiaag~p~--k~--G~~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           70 YA-----------AIEGADVVIVTAGVPR--KP--GMSR---DDLLGINL----KVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             GG-----------GGTTCSEEEECCSCCC--C----------CHHHHHHH----HHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HH-----------HHCCCCEEEEccCcCC--CC--CCCH---HHHHHhhH----HHHHHHHHHHHHHCCCeEEEecC
Confidence            22           1236899999999743  21  1111   22344444    44555566665554567777775

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.82  E-value=0.0035  Score=60.64  Aligned_cols=42  Identities=19%  Similarity=0.294  Sum_probs=37.2

Q ss_pred             CCCeEEEEc-CCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITG-STRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITG-as~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|.| |+|++|...++.+...|++|+.+++++++++.+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~  212 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL  212 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            688999997 899999999999888999999999998887644

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.82  E-value=0.0053  Score=59.17  Aligned_cols=40  Identities=18%  Similarity=0.248  Sum_probs=35.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ..|++|+|+||+|++|...++.+...|++|+.+. ++++++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            4789999999999999999999999999999886 566654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.81  E-value=0.0041  Score=59.99  Aligned_cols=41  Identities=12%  Similarity=0.171  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  236 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA  236 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5899999996 8999999998888999 899999999887643

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.80  E-value=0.0022  Score=61.83  Aligned_cols=74  Identities=19%  Similarity=0.209  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.+. ++                    +..   ...|..+.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l--------------------Ga~---~vi~~~~~  248 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL--------------------GAD---EVVNSRNA  248 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH--------------------TCS---EEEETTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCc---EEeccccH
Confidence            5899999998 89999999988889999999999988876442 22                    111   12355554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+++    +.   +++|++|.++|.
T Consensus       249 ~~~~~----~~---~g~Dvvid~~g~  267 (369)
T 1uuf_A          249 DEMAA----HL---KSFDFILNTVAA  267 (369)
T ss_dssp             HHHHT----TT---TCEEEEEECCSS
T ss_pred             HHHHH----hh---cCCCEEEECCCC
Confidence            43322    21   479999999985

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.80  E-value=0.015  Score=55.28  Aligned_cols=120  Identities=9%  Similarity=0.107  Sum_probs=76.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +.+.+.+.|+|+ |++|.++|..|+.+|.  +|++.++++++++..+.++.....-             ... ...+.. 
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~-------------~~~-~~i~~~-   79 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF-------------LKT-PKIVSS-   79 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------CSC-CEEEEC-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhc-------------cCC-CeEEEc-
Confidence            456788999997 8999999999999996  8999999999888888887653210             011 111111 


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                       .|+++           ....|++|..||...  .|  .++.   ...++.|.-    +.+.+.+.+.+....+.++++|
T Consensus        80 -~d~~~-----------~~~aDiVvi~aG~~~--kp--G~tR---~dL~~~N~~----I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           80 -KDYSV-----------TANSKLVIITAGARQ--QE--GESR---LNLVQRNVN----IFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             -SSGGG-----------GTTEEEEEECCSCCC--CT--TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             -CCHHH-----------hCCCCEEEEccCCCC--CC--CccH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEec
Confidence             12221           236899999999853  21  1222   234555543    3444455555444567788775


Q ss_pred             C
Q 016493          208 G  208 (388)
Q Consensus       208 S  208 (388)
                      -
T Consensus       137 N  137 (331)
T 4aj2_A          137 N  137 (331)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.75  E-value=0.0011  Score=63.80  Aligned_cols=41  Identities=27%  Similarity=0.190  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|..+++.+...|++|+.+++++++++.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~  219 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA  219 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            5899999999 9999999998888999999999998887644

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.74  E-value=0.0018  Score=62.53  Aligned_cols=39  Identities=23%  Similarity=0.326  Sum_probs=34.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   91 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~   91 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  221 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR  221 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            5899999998 8999999998889999 8999999988765

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.74  E-value=0.0018  Score=62.32  Aligned_cols=41  Identities=15%  Similarity=0.221  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~  231 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA  231 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5899999996 8999999998888998 799999998887644

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.70  E-value=0.0012  Score=63.27  Aligned_cols=41  Identities=22%  Similarity=0.125  Sum_probs=36.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~  220 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEA  220 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            6899999995 9999999998888999999999998876543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.69  E-value=0.0019  Score=61.54  Aligned_cols=41  Identities=20%  Similarity=0.166  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~--G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...  |++|+.+++++++++.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~  212 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA  212 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence            7899999999 89999999988888  99999999998877543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.67  E-value=0.0015  Score=60.71  Aligned_cols=46  Identities=17%  Similarity=0.174  Sum_probs=40.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTV   94 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~   94 (388)
                      ..++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.++++
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            45788999999997 6999999999999998 8999999998876543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.65  E-value=0.0036  Score=59.70  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            6899999997 8999999999989999999999999887643

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.62  E-value=0.0039  Score=60.82  Aligned_cols=41  Identities=24%  Similarity=0.313  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  254 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA  254 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            5899999998 8999999998889999 899999998887543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.60  E-value=0.0031  Score=59.41  Aligned_cols=36  Identities=17%  Similarity=0.220  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~   86 (388)
                      ..|++++|+||+|++|...++.+...|++|+.++++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            368999999999999999999999999999988854

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.60  E-value=0.022  Score=53.88  Aligned_cols=117  Identities=16%  Similarity=0.239  Sum_probs=72.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+.+.|+|+ |.+|.++|..|+..|. +|++.++++++++....++.+.....           ....++.. ..   |+
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~-----------~~~~~v~~-t~---d~   68 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIE-----------GVDFKVRG-TN---DY   68 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHH-----------TCCCCEEE-ES---CG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhc-----------CCCcEEEE-cC---CH
Confidence            467888895 9999999999999987 99999999988876666665422100           01122221 11   22


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           .+..-|++|+.+|...  .+  ..+..   ..+..|.    .+.+.+.+.+.+....+.++++|
T Consensus        69 ~-----------a~~~aDvVIi~ag~p~--k~--G~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           69 K-----------DLENSDVVIVTAGVPR--KP--GMSRD---DLLGINI----KVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             G-----------GGTTCSEEEECCSCCC--CT--TCCHH---HHHHHHH----HHHHHHHHHHHHHCTTCEEEECC
T ss_pred             H-----------HHCCCCEEEEcCCcCC--CC--CCCHH---HHHHHhH----HHHHHHHHHHHHHCCCcEEEEec
Confidence            2           1236899999999743  21  23332   3344454    34455555555544567777774

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.59  E-value=0.0028  Score=61.21  Aligned_cols=40  Identities=25%  Similarity=0.251  Sum_probs=35.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~  233 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET  233 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            5889999998 9999999999888998 89999999988763

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.57  E-value=0.0051  Score=59.24  Aligned_cols=41  Identities=12%  Similarity=0.180  Sum_probs=35.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  232 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA  232 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            5899999996 8999999998888898 799999998887643

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.56  E-value=0.049  Score=51.59  Aligned_cols=117  Identities=14%  Similarity=0.100  Sum_probs=75.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ..+.+.|+|+ |.+|..+|..|+..|.  +|++.++++++++....++.....-            ....++. ...|..
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~------------~~~~~i~-~t~d~~   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLF------------LHTAKIV-SGKDYS   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGG------------SCCSEEE-EESSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhc------------ccCCeEE-EcCCHH
Confidence            4578999998 9999999999999996  8999999999888777777653210            0112222 223432


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +              +...|++|..||...  .+  ..+.   ...+..|.    .+.+.+.+.+.+....+.++++|
T Consensus        86 ~--------------~~daDiVIitaG~p~--kp--G~tR---~dll~~N~----~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           86 V--------------SAGSKLVVITAGARQ--QE--GESR---LNLVQRNV----NIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             S--------------CSSCSEEEECCSCCC--CS--SCCT---TGGGHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             H--------------hCCCCEEEEeCCCCC--CC--CCCH---HHHHHhhH----HHHHHHHHHHHhhCCCceEEeCC
Confidence            2              236899999999854  22  1121   12333333    34455555555544567787775

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.55  E-value=0.013  Score=55.69  Aligned_cols=118  Identities=11%  Similarity=0.133  Sum_probs=70.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD--R-----VVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~--~-----Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ..+|+||||+|.||..++..|+..|.  +     +++.++++  ++++....++.....                .-...
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~----------------~~~~~   66 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL----------------PLLKD   66 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC----------------TTEEE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh----------------cccCC
Confidence            35799999999999999999998884  5     99999975  456666666654200                11111


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc-E
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG-H  202 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g-~  202 (388)
                      +.  ..+  +.       .+.+...|++|+.||...  .+  ..+   -...++.|.....    .+.+.+.+....+ .
T Consensus        67 ~~--~~~--~~-------~~~~~daDvVvitAg~pr--kp--G~t---R~dll~~N~~i~~----~i~~~i~~~~~~~~~  124 (333)
T 5mdh_A           67 VI--ATD--KE-------EIAFKDLDVAILVGSMPR--RD--GME---RKDLLKANVKIFK----CQGAALDKYAKKSVK  124 (333)
T ss_dssp             EE--EES--CH-------HHHTTTCSEEEECCSCCC--CT--TCC---TTTTHHHHHHHHH----HHHHHHHHHSCTTCE
T ss_pred             EE--EcC--Cc-------HHHhCCCCEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHH----HHHHHHHHhCCCCeE
Confidence            11  111  11       112236899999999743  21  112   2345666665554    4445555443445 5


Q ss_pred             EEEecC
Q 016493          203 IFNMDG  208 (388)
Q Consensus       203 Iv~isS  208 (388)
                      ++++|-
T Consensus       125 vivvsN  130 (333)
T 5mdh_A          125 VIVVGN  130 (333)
T ss_dssp             EEECSS
T ss_pred             EEEcCC
Confidence            777753

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.54  E-value=0.01  Score=56.02  Aligned_cols=114  Identities=18%  Similarity=0.232  Sum_probs=66.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|+||+|.+|..++..|+..|  .+|++.++++  .+....++.+..               ...++.....    .+
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~---------------~~~~l~~~~~----t~   60 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE---------------TRATVKGYLG----PE   60 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS---------------SSCEEEEEES----GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC---------------cCceEEEecC----CC
Confidence            58999999999999999999988  6899999987  233333332210               1112322210    11


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +.++.+       ...|++|+.+|...  .+  ..+..   ..+..|......+    .+.+.+....+.++++|
T Consensus        61 d~~~a~-------~~aDvVvi~ag~~~--~~--g~~r~---dl~~~n~~i~~~i----~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           61 QLPDCL-------KGCDVVVIPAGVPR--KP--GMTRD---DLFNTNATIVATL----TAACAQHCPDAMICIIS  117 (314)
T ss_dssp             GHHHHH-------TTCSEEEECCSCCC--CT--TCCGG---GGHHHHHHHHHHH----HHHHHHHCTTSEEEECS
T ss_pred             CHHHHh-------CCCCEEEECCCcCC--CC--CCcHH---HHHHHHHHHHHHH----HHHHHhhCCCeEEEEEC
Confidence            222222       36899999999854  11  12211   2355555544444    44444433467888874

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.53  E-value=0.007  Score=61.74  Aligned_cols=91  Identities=12%  Similarity=0.154  Sum_probs=60.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHHhhhhhhcC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAG  109 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~~~  109 (388)
                      ++++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .|.+.+.+.+++..+       
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP-------  394 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP-------  394 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT-------
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC-------
Confidence            577899999997 7999999999999995 799998864                   466777777766543       


Q ss_pred             CCCcccccCceEEEEEccC-------CCHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          110 GSSKKNLVHAKVAGIACDV-------CEPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       110 ~~~~~~~~~~~i~~~~~Dl-------s~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                              ..++..+..++       ++.+...--.+.+.+.+.+.|+||++..
T Consensus       395 --------~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          395 --------LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             --------TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             --------CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence                    35666666554       2221111111112222336899998874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.50  E-value=0.0044  Score=59.36  Aligned_cols=41  Identities=17%  Similarity=0.186  Sum_probs=33.9

Q ss_pred             CCCCeEEEEcCCChHHHHH-HHHH-HHCCCe-EEEEeCChH---HHHH
Q 016493           51 AGPRNVVITGSTRGLGKAL-AREF-LLSGDR-VVVASRSSE---SVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~ai-A~~L-a~~G~~-Vil~~R~~~---~l~~   92 (388)
                      .++++|+|+|| |++|... ++.+ ...|++ |+.++++++   +++.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~  217 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI  217 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence            34499999999 9999999 7766 678997 999999887   6654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.48  E-value=0.016  Score=56.02  Aligned_cols=42  Identities=12%  Similarity=0.062  Sum_probs=38.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +.+++|+|.|+ |.+|..+++.+...|++|++.+|++++++++
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  223 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQV  223 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            47899999998 7999999999999999999999999887655

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.47  E-value=0.0024  Score=58.36  Aligned_cols=42  Identities=24%  Similarity=0.362  Sum_probs=36.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .+++ +++|.|+ ||.|++++..|++.|+ +|++.+|+.++++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4678 8999997 8999999999999998 899999998876543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.46  E-value=0.0041  Score=57.30  Aligned_cols=41  Identities=37%  Similarity=0.398  Sum_probs=38.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   94 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~   94 (388)
                      +|+++|.|+ ||.|++++..|++.|.+|.+..|+.++.+++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            899999997 89999999999999999999999999988766

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.46  E-value=0.068  Score=50.31  Aligned_cols=117  Identities=23%  Similarity=0.252  Sum_probs=73.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +...+.|+|| |.+|..++..|+.+|  ..|++.++++++++....++....+.             .+..+.... |  
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~-------------~~~~~~v~~-~--   67 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPY-------------SPTTVRVKA-G--   67 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGG-------------SSSCCEEEE-C--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhh-------------cCCCeEEEe-C--
Confidence            4467999998 999999999999988  48999999998887666666543111             111222222 2  


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +.+.           +...|++|..+|...  .+  ..+.+   ..+..|.    .+++.+.+.+.+....+.++++|
T Consensus        68 ~~~a-----------~~~aDvVvi~ag~~~--~~--g~~r~---dl~~~n~----~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           68 EYSD-----------CHDADLVVICAGAAQ--KP--GETRL---DLVSKNL----KIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             CGGG-----------GTTCSEEEECCCCCC--CT--TCCHH---HHHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CHHH-----------hCCCCEEEECCCCCC--CC--CCcHH---HHHHHHH----HHHHHHHHHHHHhCCCcEEEEec
Confidence            2222           236899999999843  21  23322   2334443    34555566666554567777764

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.44  E-value=0.0033  Score=56.38  Aligned_cols=72  Identities=19%  Similarity=0.114  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .++++|.|+ |.+|..+++.|.++|+ |++++++++..+++.                        ..+.++..|.++++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------------------------~~~~~i~gd~~~~~   62 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR------------------------SGANFVHGDPTRVS   62 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------------------------TTCEEEESCTTCHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------------------------cCCeEEEcCCCCHH
Confidence            457899997 8999999999999999 999999988765432                        12667899999987


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccc
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      .++++      ...+.|.+|.+.+
T Consensus        63 ~l~~a------~i~~ad~vi~~~~   80 (234)
T 2aef_A           63 DLEKA------NVRGARAVIVDLE   80 (234)
T ss_dssp             HHHHT------TCTTCSEEEECCS
T ss_pred             HHHhc------CcchhcEEEEcCC
Confidence            66543      1236799888764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.37  E-value=0.0059  Score=53.64  Aligned_cols=42  Identities=36%  Similarity=0.502  Sum_probs=37.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~   96 (388)
                      +++|+||+|.+|.++++.|+++|++|++.+|++++.+++.++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578999999999999999999999999999998887665443

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.37  E-value=0.011  Score=57.38  Aligned_cols=41  Identities=22%  Similarity=0.243  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|.|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA  226 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH
Confidence            5899999995 9999999988888998 689999998887643

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.27  E-value=0.0066  Score=61.81  Aligned_cols=64  Identities=13%  Similarity=0.251  Sum_probs=49.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHHhhhhhhc
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAA  108 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~~  108 (388)
                      .++++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+                   ..|.+.+.+.+++..+      
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP------  395 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP------  395 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCT------
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCC------
Confidence            4567899999997 7999999999999996 79999664                   2577777777776433      


Q ss_pred             CCCCcccccCceEEEEEccC
Q 016493          109 GGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus       109 ~~~~~~~~~~~~i~~~~~Dl  128 (388)
                               ..++..+..++
T Consensus       396 ---------~v~v~~~~~~I  406 (598)
T 3vh1_A          396 ---------LMDATGVKLSI  406 (598)
T ss_dssp             ---------TCEEEEECCCC
T ss_pred             ---------CcEEEEEeccc
Confidence                     35666666554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.26  E-value=0.049  Score=51.52  Aligned_cols=117  Identities=18%  Similarity=0.245  Sum_probs=72.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+...+.|+|| |.+|..++..|+..+.  +|++.++++++++....++.+..+              ....+.+.. | 
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~i~~-~-   69 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP--------------FTSPKKIYS-A-   69 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--------------GSCCCEEEE-C-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH--------------hcCCeEEEE-C-
Confidence            34568999998 9999999999998885  799999999988877776654211              012222222 2 


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                       +.++           +...|++|..+|...  .+  ..+.+   ..+..|.-    +++.+.+.+.+....+.|+++|
T Consensus        70 -~~~a-----------~~~aDvVii~ag~~~--k~--g~~R~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           70 -EYSD-----------AKDADLVVITAGAPQ--KP--GETRL---DLVNKNLK----ILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             -CGGG-----------GGGCSEEEECCCCC---------CHH---HHHHHHHH----HHHHHHHHHHHHTCCSEEEECS
T ss_pred             -CHHH-----------hCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeC
Confidence             2222           236899999999743  21  22322   23444433    4455555555544567888874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.26  E-value=0.0044  Score=59.18  Aligned_cols=40  Identities=13%  Similarity=0.106  Sum_probs=35.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  206 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI  206 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH
Confidence            5899999996 8999999998888998 79999999887653

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.23  E-value=0.0089  Score=57.53  Aligned_cols=46  Identities=24%  Similarity=0.343  Sum_probs=40.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~   96 (388)
                      +++||+++|.|. |.+|..+|+.|.+.|++|++.+++.+++++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999999997 8899999999999999999999998877665544

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.23  E-value=0.0068  Score=58.29  Aligned_cols=41  Identities=10%  Similarity=0.161  Sum_probs=35.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            5899999995 8999999998888898 699999998877543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.22  E-value=0.048  Score=51.30  Aligned_cols=115  Identities=12%  Similarity=0.138  Sum_probs=71.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|+|+ |.+|..+|..|+..|.  +|++.++++++++....++......             ..........|  +++
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------------~~~~~~v~~~~--~~~   65 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-------------HGFDTRVTGTN--DYG   65 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-------------HTCCCEEEEES--SSG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-------------cCCCcEEEECC--CHH
Confidence            4788997 9999999999999886  8999999998887766666553211             01112222112  222


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                                 .+..-|++|..||...  .|  ..+   -...++.|.    .+++...+.+.+....+.++++|
T Consensus        66 -----------a~~~aDvVii~ag~~~--kp--G~~---R~dl~~~N~----~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           66 -----------PTEDSDVCIITAGLPR--SP--GMS---RDDLLAKNT----EIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             -----------GGTTCSEEEECCCC--------------CHHHHHHHH----HHHHHHHHHHHTTCTTCEEEECC
T ss_pred             -----------HhCCCCEEEECCCCCC--CC--CCC---HHHHHHhhH----HHHHHHHHHHHHhCCCcEEEecC
Confidence                       2346899999999743  21  111   233445554    44566667777665567777775

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.17  E-value=0.0086  Score=58.21  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      .|++|+|.|+ |++|...++.+...|+ +|+.+++++++++.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL  225 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            5899999997 9999999988888899 89999999887654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.15  E-value=0.0034  Score=60.09  Aligned_cols=37  Identities=22%  Similarity=0.265  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .|++|+|+||+|++|...++.+...|++|+++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5899999999999999999888888999888776543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.14  E-value=0.026  Score=53.52  Aligned_cols=47  Identities=17%  Similarity=0.135  Sum_probs=39.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      +...+.|.|| |.+|.++|..|+..|. +|++.++++++++....++..
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~   55 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   55 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHh
Confidence            4457999998 9999999999999997 999999999888875555544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.13  E-value=0.0097  Score=57.73  Aligned_cols=43  Identities=14%  Similarity=0.108  Sum_probs=38.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .+.|++|+|+|+ |++|+.+++.+...|++|++.+|++++++.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            568999999996 8999999999999999999999998877654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=96.13  E-value=0.014  Score=55.34  Aligned_cols=41  Identities=20%  Similarity=0.251  Sum_probs=33.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~   92 (388)
                      ..|++++|.|| +|+|...++.+... |++|+.+++++++++.
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~  203 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL  203 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh
Confidence            46899999997 78888888877766 6899999999987653

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.12  E-value=0.017  Score=54.90  Aligned_cols=42  Identities=17%  Similarity=0.282  Sum_probs=35.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~   93 (388)
                      ..|++++|+|+ |++|...++.+... |++|+.+++++++++.+
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~  212 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA  212 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            36899999998 99999988877666 68999999999887643

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.11  E-value=0.0067  Score=58.23  Aligned_cols=84  Identities=23%  Similarity=0.361  Sum_probs=62.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHHhhhhhh
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMA  107 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~-------------------~~l~~~~~~l~~~~~~~~~~  107 (388)
                      +.++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .|.+.+.+.+++..+     
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-----  186 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS-----  186 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC-----
Confidence            34567899999997 8999999999999996 799998863                   355666666665433     


Q ss_pred             cCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                                ..++..+..++++..++.       + +.+.|++|.+.
T Consensus       187 ----------~v~v~~~~~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          187 ----------EISVSEIALNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             ----------TSEEEEEECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             ----------CCeEEEeecccCchhhhh-------H-hccCCEEEEec
Confidence                      367888888887755322       2 45789998876

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.06  E-value=0.02  Score=55.72  Aligned_cols=42  Identities=10%  Similarity=0.039  Sum_probs=38.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +.+.+|+|.|+ |.+|..+++.+...|++|++.++++++++.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  229 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV  229 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56789999998 7999999999999999999999999887654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.99  E-value=0.0064  Score=57.66  Aligned_cols=72  Identities=19%  Similarity=0.132  Sum_probs=55.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .++++|.|+ |.+|..++++|.++|. |+++++++++.+ ..    +                   ..+.++..|.+|++
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~-------------------~~~~~i~gd~~~~~  168 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R-------------------SGANFVHGDPTRVS  168 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H-------------------TTCEEEESCTTSHH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h-------------------CCcEEEEeCCCCHH
Confidence            468999997 8899999999999999 999999998765 32    1                   23677899999988


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccc
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      .++++      ...+.|.+|...+
T Consensus       169 ~L~~a------~i~~a~~vi~~~~  186 (336)
T 1lnq_A          169 DLEKA------NVRGARAVIVDLE  186 (336)
T ss_dssp             HHHHT------CSTTEEEEEECCS
T ss_pred             HHHhc------ChhhccEEEEcCC
Confidence            77653      1236788887653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.99  E-value=0.092  Score=49.25  Aligned_cols=113  Identities=18%  Similarity=0.150  Sum_probs=71.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|+|| |.+|..++..|+..+  .+|++.++++++++..+.++.+..+-              ...+.+.. |  +.+
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~--------------~~~~~v~~-~--~~~   63 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPF--------------AHPVWVWA-G--SYG   63 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGG--------------SCCCEEEE-C--CGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhh--------------cCCeEEEE-C--CHH
Confidence            5889998 999999999999988  58999999998888766666542110              01222222 2  333


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           +...|++|..+|...  .+  ..+.+   ..+..|.-    +++.+.+.+.+....+.++++|
T Consensus        64 a-----------~~~aD~Vii~ag~~~--~~--g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           64 D-----------LEGARAVVLAAGVAQ--RP--GETRL---QLLDRNAQ----VFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             G-----------GTTEEEEEECCCCCC--CT--TCCHH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             H-----------hCCCCEEEECCCCCC--CC--CcCHH---HHHHhhHH----HHHHHHHHHHHHCCCcEEEEec
Confidence            2           236899999999754  21  23333   23444433    4455555555544567888874

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.85  E-value=0.015  Score=54.51  Aligned_cols=40  Identities=25%  Similarity=0.253  Sum_probs=35.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|+|| |++|...++.+...|++|+.++ ++++++.+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~  181 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA  181 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence            5899999999 9999999998888999999999 77776543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.80  E-value=0.026  Score=55.84  Aligned_cols=52  Identities=23%  Similarity=0.163  Sum_probs=39.8

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHH
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      ..+++++|.++|.|. |+.|.++|+.|+++|++|.+.+++........+.+++
T Consensus         3 ~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~   54 (451)
T 3lk7_A            3 TITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE   54 (451)
T ss_dssp             -CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH
T ss_pred             chhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh
Confidence            345688999999998 7899999999999999999999876422223344443

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.80  E-value=0.093  Score=49.39  Aligned_cols=114  Identities=18%  Similarity=0.231  Sum_probs=71.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ..+.|+|| |.+|..++..|+..+.  +|++.++++++++....++.+..+              ....+.+.. |  +.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~v~~-~--~~   67 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA--------------FTAPKKIYS-G--EY   67 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG--------------GSCCCEEEE-C--CG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH--------------hcCCeEEEE-C--CH
Confidence            57999998 9999999999998885  899999999988877777654321              011222222 2  22


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           .+...|++|..+|...  .+  ..+.   ...+..|    ..+++.+.+.+.+....+.++++|
T Consensus        68 ~-----------a~~~aDvVii~ag~~~--~~--g~~R---~dl~~~n----~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           68 S-----------DCKDADLVVITAGAPQ--KP--GESR---LDLVNKN----LNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             G-----------GGTTCSEEEECCCC-----------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             H-----------HhCCCCEEEECCCCCC--CC--CCCH---HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEeC
Confidence            2           2346899999999743  11  1111   1223333    345566667676665678888874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.79  E-value=0.012  Score=55.37  Aligned_cols=40  Identities=23%  Similarity=0.284  Sum_probs=36.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      |+ |+|+||+|++|...++.+...|++|+.+++++++++.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            46 99999999999999999999999999999999887654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.77  E-value=0.021  Score=55.91  Aligned_cols=40  Identities=25%  Similarity=0.385  Sum_probs=35.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +.+|+|.|. |-+|..+++.|.++|+.|++++++++..+++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~   43 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETL   43 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence            356899997 7799999999999999999999999887654

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.75  E-value=0.0073  Score=57.00  Aligned_cols=39  Identities=26%  Similarity=0.370  Sum_probs=35.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +|+|+||+||+|..+++.+...|++|+++++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999989999999999998876543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.73  E-value=0.071  Score=49.95  Aligned_cols=45  Identities=16%  Similarity=0.127  Sum_probs=38.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      +++.|+|| |.+|..++..|+..|. +|++.++++++++....++.+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            46899998 9999999999999996 899999999888765555543

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=95.73  E-value=0.057  Score=53.75  Aligned_cols=122  Identities=12%  Similarity=0.134  Sum_probs=72.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-----CCeEEEEeCChHHHHHHHHHHHHHH-hhhhhhcCCCCcccccCceEEEEEc
Q 016493           53 PRNVVITGSTRGLGKALAREFLLS-----GDRVVVASRSSESVRMTVTELEENL-KEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~-----G~~Vil~~R~~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .+.+.|.||++..|.++|..|+++     +.+|++.++++++++... ++.+.. +..           ....++.. . 
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~-~~~~~~l~~~-----------~~~~~I~~-t-   93 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA-GACDVFIREK-----------APDIEFAA-T-   93 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH-HHHHHHHHHH-----------CTTSEEEE-E-
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH-HHHHHHhccC-----------CCCCEEEE-E-
Confidence            457888899888888899889988     678999999999887754 333332 110           01233332 1 


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhh----------------chHHHHHHHHH
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN----------------LVGSILCTREA  190 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN----------------~~g~~~l~~~~  190 (388)
                        +|.+   +.+       ..-|++|..+|...  .  .   ...-+..+..+                ..-.+-+++.+
T Consensus        94 --~D~~---eal-------~~AD~VViaag~~~--~--~---g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i  154 (472)
T 1u8x_X           94 --TDPE---EAF-------TDVDFVMAHIRVGK--Y--A---MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEI  154 (472)
T ss_dssp             --SCHH---HHH-------SSCSEEEECCCTTH--H--H---HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHH
T ss_pred             --CCHH---HHH-------cCCCEEEEcCCCcc--c--c---ccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHH
Confidence              2321   111       26899999998743  1  1   11112222111                22334456677


Q ss_pred             HHHHHcCCCCcEEEEec
Q 016493          191 MRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       191 lp~m~~~~~~g~Iv~is  207 (388)
                      .+.+.+....+.++++|
T Consensus       155 ~~~i~~~~P~A~ii~~T  171 (472)
T 1u8x_X          155 LDYMEKYSPDAWMLNYS  171 (472)
T ss_dssp             HHHHHHHCTTCEEEECC
T ss_pred             HHHHHHHCCCeEEEEeC
Confidence            77777765667777775

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.69  E-value=0.063  Score=53.47  Aligned_cols=45  Identities=16%  Similarity=0.194  Sum_probs=37.3

Q ss_pred             CCeEEEEcCCC-hHHHHHHHHHHHC----CCeEEEEeCChHHHHHHHHHH
Q 016493           53 PRNVVITGSTR-GLGKALAREFLLS----GDRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        53 gk~vlITGas~-GIG~aiA~~La~~----G~~Vil~~R~~~~l~~~~~~l   97 (388)
                      .+.+.|.||++ |.|.++|..|++.    |.+|++.++++++++...+..
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~   52 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIA   52 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHH
Confidence            35788999999 8999999998864    889999999999988755543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.68  E-value=0.09  Score=49.58  Aligned_cols=45  Identities=16%  Similarity=0.158  Sum_probs=38.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      +++.|.|| |.+|..+|..|+..|. +|++.++++++++....++..
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~   50 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH   50 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh
Confidence            57889998 9999999999999997 999999999888766666544

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.67  E-value=0.031  Score=52.72  Aligned_cols=115  Identities=17%  Similarity=0.207  Sum_probs=64.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ...+.|+|+ |.+|..++..|+..|.  +|++.+.++++++....++.+..+              ....+... .  .+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~i~-~--~~   68 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--------------FMGQMSLY-A--GD   68 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--------------CTTCEEEC-----C
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH--------------hcCCeEEE-E--CC
Confidence            356888898 9999999999999996  899999998877655555432100              00122211 1  12


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      .+           .+...|++|..+|...  .+  ..+.   ...+..|.--...+++.    +.+....+.|+++|
T Consensus        69 ~~-----------a~~~aDvVii~~g~p~--k~--g~~r---~dl~~~n~~i~~~i~~~----i~~~~p~a~viv~t  123 (318)
T 1y6j_A           69 YS-----------DVKDCDVIVVTAGANR--KP--GETR---LDLAKKNVMIAKEVTQN----IMKYYNHGVILVVS  123 (318)
T ss_dssp             GG-----------GGTTCSEEEECCCC----------CH---HHHHHHHHHHHHHHHHH----HHHHCCSCEEEECS
T ss_pred             HH-----------HhCCCCEEEEcCCCCC--CC--CcCH---HHHHHhhHHHHHHHHHH----HHHhCCCcEEEEec
Confidence            22           2346899999999743  11  1222   23455555544444444    44333456777753

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.66  E-value=0.14  Score=48.11  Aligned_cols=116  Identities=15%  Similarity=0.113  Sum_probs=69.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .+++.|+|+ |.+|..++..|+..|.  +|++.++++++++....++.+....             .+..+.... |  +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~-------------~~~~~~i~~-~--~   68 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVF-------------APKPVDIWH-G--D   68 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTS-------------SSSCCEEEE-C--C
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhh-------------cCCCeEEEc-C--c
Confidence            468999998 9999999999998874  7999999988776655555442110             111222222 1  2


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      .+           .+...|++|..+|.....+    .+..   ..+..|    ..+.+.+.+.+.+....+.++++|
T Consensus        69 ~~-----------al~~aDvViia~~~~~~~g----~~r~---dl~~~n----~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           69 YD-----------DCRDADLVVICAGANQKPG----ETRL---DLVDKN----IAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             GG-----------GTTTCSEEEECCSCCCCTT----TCSG---GGHHHH----HHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             HH-----------HhCCCCEEEEcCCCCCCCC----CCHH---HHHHcC----hHHHHHHHHHHHHHCCCCEEEEeC
Confidence            22           1236899999999854211    1111   123333    345566666666543456666653

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.62  E-value=0.0016  Score=62.54  Aligned_cols=39  Identities=23%  Similarity=0.329  Sum_probs=35.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      +++||++.|.| .|.+|+.+|+.+.+.|++|++.++++++
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            68999999998 5899999999999999999999988654

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.61  E-value=0.13  Score=48.70  Aligned_cols=45  Identities=13%  Similarity=0.123  Sum_probs=38.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      +.+.|.|| |.+|..+|..|+..|. +|++.++++++++....++..
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~   60 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNH   60 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh
Confidence            57899998 9999999999999998 999999999888865555544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.59  E-value=0.024  Score=52.90  Aligned_cols=44  Identities=27%  Similarity=0.327  Sum_probs=39.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      ...++||+++|.|+ |+||+++|+.+...|++|++.+|+.++.++
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            35789999999996 899999999999999999999999876543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.56  E-value=0.1  Score=48.86  Aligned_cols=114  Identities=20%  Similarity=0.285  Sum_probs=70.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +.|+|| |.+|..++..++..|. +|++.++++++++....++.+.....           ....++... .|   .+. 
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~-----------~~~~~i~~t-~d---~~a-   64 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAEL-----------GVDIRISGS-NS---YED-   64 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHH-----------TCCCCEEEE-SC---GGG-
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhc-----------CCCeEEEEC-CC---HHH-
Confidence            788998 9999999999998887 69999999988877666665432100           011223221 22   221 


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                                +...|++|..+|...  .+  ..+.+   ..+..|    ..+.+.+.+.+.+....+.++++|
T Consensus        65 ----------~~~aD~Vi~~ag~~~--k~--G~~r~---dl~~~n----~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           65 ----------MRGSDIVLVTAGIGR--KP--GMTRE---QLLEAN----ANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             ----------GTTCSEEEECCSCCC--CS--SCCTH---HHHHHH----HHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             ----------hCCCCEEEEeCCCCC--CC--CCcHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEeC
Confidence                      236899999999854  22  22222   223333    335566666666543567777774

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.55  E-value=0.21  Score=47.47  Aligned_cols=120  Identities=13%  Similarity=0.143  Sum_probs=70.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCce
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAK  120 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  120 (388)
                      +++.-.|.|+||+|+||..++..|+....       .+.+.+.++.  +++-..-++....               ....
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~---------------~~~~   85 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA---------------FPLL   85 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT---------------CTTE
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC---------------ccCC
Confidence            44556899999999999999999987642       6899998763  4455555554421               1111


Q ss_pred             EEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CC
Q 016493          121 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PK  199 (388)
Q Consensus       121 i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~  199 (388)
                      ......  +|..          +.+...|++|..||...  .|  .++.+   ..++.|..    +++...+.+.+. .+
T Consensus        86 ~~~~~~--~~~~----------~a~~~advVvi~aG~pr--kp--GmtR~---DLl~~Na~----I~~~~~~~i~~~a~~  142 (345)
T 4h7p_A           86 DKVVVT--ADPR----------VAFDGVAIAIMCGAFPR--KA--GMERK---DLLEMNAR----IFKEQGEAIAAVAAS  142 (345)
T ss_dssp             EEEEEE--SCHH----------HHTTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHH----HHHHHHHHHHHHSCT
T ss_pred             CcEEEc--CChH----------HHhCCCCEEEECCCCCC--CC--CCCHH---HHHHHhHH----HHHHHHHHHHhhccC
Confidence            111221  1211          12347899999999854  22  23443   44666654    445555555543 23


Q ss_pred             CcEEEEec
Q 016493          200 GGHIFNMD  207 (388)
Q Consensus       200 ~g~Iv~is  207 (388)
                      ...|+.+|
T Consensus       143 ~~~vlvvs  150 (345)
T 4h7p_A          143 DCRVVVVG  150 (345)
T ss_dssp             TCEEEECS
T ss_pred             ceEEEEeC
Confidence            34555554

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.53  E-value=0.024  Score=51.69  Aligned_cols=46  Identities=22%  Similarity=0.235  Sum_probs=39.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~   96 (388)
                      .+++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.++
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            46788 9999996 7899999999999999999999998877665543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.49  E-value=0.016  Score=53.53  Aligned_cols=45  Identities=20%  Similarity=0.364  Sum_probs=39.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      ..+++||+++|.|+|+-+|+.+|+.|+.+|++|.++.|+...+++
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~  199 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL  199 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHH
Confidence            368999999999998889999999999999999999887665543

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.49  E-value=0.11  Score=48.61  Aligned_cols=44  Identities=16%  Similarity=0.151  Sum_probs=37.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l   97 (388)
                      .+++.|.|+ |.+|..+|..|++.|. +|++.++++++++....++
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l   48 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDI   48 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHH
Confidence            357889998 8999999999999998 9999999998877643333

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.46  E-value=0.0099  Score=54.86  Aligned_cols=44  Identities=16%  Similarity=0.321  Sum_probs=38.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .++++++++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+++
T Consensus       125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            4567899999996 7999999999999999999999998876544

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.43  E-value=0.3  Score=45.35  Aligned_cols=114  Identities=13%  Similarity=0.172  Sum_probs=73.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |.|+|| |++|..+|..|+.+|  .++++.+.++++.+..+.+|......             .+........  .|+++
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~-------------~~~~~~i~~~--~d~~~   66 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-------------IDKYPKIVGG--ADYSL   66 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG-------------GTCCCEEEEE--SCGGG
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc-------------CCCCCeEecC--CCHHH
Confidence            677895 999999999999888  37999999998887777777653221             1111222211  12222


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                                 ...-|++|..||...  .|  .++.+   ..++.|.    .+++.+.+.+.+....+.++++|
T Consensus        67 -----------~~~aDvVvitAG~pr--kp--GmtR~---dLl~~Na----~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           67 -----------LKGSEIIVVTAGLAR--KP--GMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             -----------GTTCSEEEECCCCCC--CS--SSCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECS
T ss_pred             -----------hCCCCEEEEecCCCC--CC--CCchH---HHHHHHH----HHHHHHHHHHHhcCCceEEEEec
Confidence                       236899999999854  22  23433   4456664    35666777777765567777765

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.39  E-value=0.041  Score=53.03  Aligned_cols=72  Identities=19%  Similarity=0.118  Sum_probs=53.1

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..+.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+++...   .                      ...-..+..
T Consensus         6 ~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~----------------------~~ad~~~~~   59 (377)
T 3orq_A            6 FNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---R----------------------YVAHEFIQA   59 (377)
T ss_dssp             CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---G----------------------GGSSEEEEC
T ss_pred             cccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---h----------------------hhCCEEEEC
Confidence            345668999999996 67999999999999999999988754210   0                      001134668


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIW  151 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~l  151 (388)
                      |..|.+.+.+++++       +|++
T Consensus        60 ~~~d~~~l~~~~~~-------~dvi   77 (377)
T 3orq_A           60 KYDDEKALNQLGQK-------CDVI   77 (377)
T ss_dssp             CTTCHHHHHHHHHH-------CSEE
T ss_pred             CCCCHHHHHHHHHh-------CCcc
Confidence            99998888877653       6776

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.37  E-value=0.17  Score=50.42  Aligned_cols=47  Identities=19%  Similarity=0.328  Sum_probs=39.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEEN  100 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~  100 (388)
                      -++|.|.|+ |-+|..+|..|++.|++|++.+|+++++++..+.+.+.
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~   51 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHAR   51 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHH
Confidence            345667776 88999999999999999999999999998887766543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.33  E-value=0.034  Score=51.68  Aligned_cols=42  Identities=29%  Similarity=0.412  Sum_probs=38.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      .+++||+++|.|+ |+||+++|+.+...|++|++.+|+.++.+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            5789999999995 89999999999999999999999987654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.30  E-value=0.28  Score=45.98  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=37.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      ++.|.|+ |.+|.+++..|++.|.  +|++.++++++++....++..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~   47 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH   47 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHh
Confidence            5788998 9999999999999998  999999999888776555443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.30  E-value=0.027  Score=51.09  Aligned_cols=77  Identities=13%  Similarity=0.260  Sum_probs=56.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .+.|.|++|.+|+.+++.+.+. |++|+......+.+++...    .                 ...   +..|.+.++.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~-----------------~~D---vvIDfT~p~a   57 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G-----------------NTE---VVIDFTHPDV   57 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T-----------------TCC---EEEECSCTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c-----------------CCc---EEEEccChHH
Confidence            4899999999999999999876 8888765443333332211    0                 112   5679999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEcccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+.+..+.+.  ++++++...|.
T Consensus        58 ~~~~~~~a~~~--g~~~VigTTG~   79 (245)
T 1p9l_A           58 VMGNLEFLIDN--GIHAVVGTTGF   79 (245)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHc--CCCEEEcCCCC
Confidence            99888887665  68999888774

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.28  E-value=0.043  Score=51.07  Aligned_cols=46  Identities=17%  Similarity=0.303  Sum_probs=39.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~   98 (388)
                      .-++|.|.|+ |.+|.++|..|++.|++|++.+|+++++++..+.+.
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~   59 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   59 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence            3467999997 889999999999999999999999998887655443

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.24  E-value=0.029  Score=51.72  Aligned_cols=45  Identities=22%  Similarity=0.335  Sum_probs=39.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l   97 (388)
                      .+|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            5688999995 8999999999999997 7999999999887776554

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.20  E-value=0.0095  Score=56.16  Aligned_cols=42  Identities=12%  Similarity=0.140  Sum_probs=37.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      ..+++||+++|.|++.=+|+-+|+.|+..|++|.+++|+..+
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~  213 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ  213 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHH
Confidence            347899999999988778999999999999999999998443

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.16  E-value=0.098  Score=48.14  Aligned_cols=93  Identities=14%  Similarity=0.168  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +++.|.|+ |.+|..+|+.|++.|++|++.+|++++.+++.+.-    .     .......+ .-....++..=+.+...
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g----~-----~~~~~~~~-~~~~aDvvi~~vp~~~~   70 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALG----A-----ERAATPCE-VVESCPVTFAMLADPAA   70 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTT----C-----EECSSHHH-HHHHCSEEEECCSSHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC----C-----eecCCHHH-HHhcCCEEEEEcCCHHH
Confidence            46778885 89999999999999999999999998877654310    0     00000000 00112233344555667


Q ss_pred             HHHHH---HHHHhhcCCccEEEEcccc
Q 016493          134 VQKLS---NFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       134 v~~~~---~~i~~~~g~iD~li~nAG~  157 (388)
                      ++.++   +.+.+...+=.++|+..+.
T Consensus        71 ~~~v~~~~~~l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           71 AEEVCFGKHGVLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             HHHHHHSTTCHHHHCCTTCEEEECSCC
T ss_pred             HHHHHcCcchHhhcCCCCCEEEeCCCC
Confidence            77777   6565544444566666543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.08  E-value=0.13  Score=48.07  Aligned_cols=42  Identities=19%  Similarity=0.397  Sum_probs=35.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l   97 (388)
                      ++.|+|| |.+|..+|..|+..|.  +|++.++++++++....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l   45 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI   45 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh
Confidence            5889998 9999999999999998  9999999988776544433

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.07  E-value=0.13  Score=47.43  Aligned_cols=92  Identities=14%  Similarity=0.215  Sum_probs=57.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~---~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +++.|.|+ |.+|.++++.|++.|+   +|++.+|++++++++.+++.-..       ..+..+......+.++.+   .
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~-------~~~~~~~~~~aDvVilav---~   72 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT-------TQDNRQGALNADVVVLAV---K   72 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE-------ESCHHHHHSSCSEEEECS---C
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE-------eCChHHHHhcCCeEEEEe---C
Confidence            56778887 8899999999999998   89999999998876654310000       000000001234544444   3


Q ss_pred             HHHHHHHHHHHHhh-cCCccEEEEccc
Q 016493          131 PADVQKLSNFAVNE-FGSIDIWINNAG  156 (388)
Q Consensus       131 ~~~v~~~~~~i~~~-~g~iD~li~nAG  156 (388)
                      ++.++++++++... ..+=.++|++++
T Consensus        73 p~~~~~vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           73 PHQIKMVCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             GGGHHHHHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHHHHHHHhhccCCCeEEEEecC
Confidence            46677777777654 432237777654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.03  E-value=0.058  Score=50.10  Aligned_cols=92  Identities=12%  Similarity=0.017  Sum_probs=59.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +++.|.| .|.+|..+|+.|++.|++|++.+|++++.+++.+.    .   .  .......+...  ..++..=+.+...
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~----g---~--~~~~~~~~~~~--aDvvi~~vp~~~~   83 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA----G---A--TLADSVADVAA--ADLIHITVLDDAQ   83 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT----T---C--EECSSHHHHTT--SSEEEECCSSHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC----C---C--EEcCCHHHHHh--CCEEEEECCChHH
Confidence            4577777 47899999999999999999999999887665431    0   0  00000000011  3344455666778


Q ss_pred             HHHHHHHHHhhcCCccEEEEcccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      ++++++.+.+...+=.++|+....
T Consensus        84 ~~~v~~~l~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           84 VREVVGELAGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HHHHHHHHHTTCCTTCEEEECSCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCC
Confidence            888887776655445677776643

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=94.98  E-value=0.091  Score=49.60  Aligned_cols=41  Identities=24%  Similarity=0.339  Sum_probs=34.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~   92 (388)
                      ..|++|+|+|+ ||+|...++.+...|++ ++++++++++++.
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~  200 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL  200 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH
Confidence            36899999997 89999999999999986 4677888887653

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.94  E-value=0.11  Score=49.66  Aligned_cols=46  Identities=15%  Similarity=0.195  Sum_probs=36.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   94 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~   94 (388)
                      +++++++++.|.| .|-+|..+|+.|++.|++|++.+|++++.+++.
T Consensus        17 ~~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~   62 (358)
T 4e21_A           17 NLYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE   62 (358)
T ss_dssp             -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             hhhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            4556778888898 588999999999999999999999998876553

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.94  E-value=0.1  Score=48.76  Aligned_cols=43  Identities=26%  Similarity=0.244  Sum_probs=36.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   94 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~   94 (388)
                      .+.+++.|.|. |-+|..+|+.|++.|++|++.+|++++.+++.
T Consensus        19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            34467888885 88999999999999999999999998877654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=94.93  E-value=0.37  Score=45.13  Aligned_cols=114  Identities=15%  Similarity=0.167  Sum_probs=67.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-C--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           55 NVVITGSTRGLGKALAREFLLS-G--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~-G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|.|+||+|.+|.+++..|+.+ +  .++++.++++ +++....++...  .             ...++..+.. -.++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~-------------~~~~v~~~~~-~~~~   64 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--P-------------TAVKIKGFSG-EDAT   64 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--C-------------SSEEEEEECS-SCCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--C-------------CCceEEEecC-CCcH
Confidence            4789999999999999999875 5  5799999987 444334444321  0             1122322211 1123


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++           ...|++|..||...  .|  .++.   ...++.|..-...+    .+.+.+....+.++++|
T Consensus        65 ~~~-----------~~aDivii~ag~~r--kp--G~~R---~dll~~N~~I~~~i----~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           65 PAL-----------EGADVVLISAGVAR--KP--GMDR---SDLFNVNAGIVKNL----VQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             HHH-----------TTCSEEEECCSCSC--CT--TCCH---HHHHHHHHHHHHHH----HHHHHHHCTTSEEEECS
T ss_pred             HHh-----------CCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHHHHH----HHHHHHHCCCcEEEEec
Confidence            322           36899999999743  21  2332   44566665444444    44444433467777775

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=94.93  E-value=0.036  Score=55.09  Aligned_cols=73  Identities=11%  Similarity=0.281  Sum_probs=55.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      +++|.|+ |-+|..+|+.|.++|++|+++++++++++++.+++                      .+.++..|.++++-+
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------------------~~~~i~Gd~~~~~~L   61 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------------------DLRVVNGHASHPDVL   61 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------------------SCEEEESCTTCHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------------------CcEEEEEcCCCHHHH
Confidence            4888987 67999999999999999999999999887654432                      356678888888776


Q ss_pred             HHHHHHHHhhcCCccEEEEccc
Q 016493          135 QKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +++=      ..+-|.+|...+
T Consensus        62 ~~Ag------i~~ad~~ia~t~   77 (461)
T 4g65_A           62 HEAG------AQDADMLVAVTN   77 (461)
T ss_dssp             HHHT------TTTCSEEEECCS
T ss_pred             HhcC------CCcCCEEEEEcC
Confidence            5531      125677776544

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=94.87  E-value=0.042  Score=50.49  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=37.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      ++||+++|.|+|+=+|+.+|+.|+++|++|.++.|+...+++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~  189 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGS  189 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHH
Confidence            899999999998889999999999999999999887655544

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=94.87  E-value=0.39  Score=44.67  Aligned_cols=44  Identities=23%  Similarity=0.418  Sum_probs=37.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~   98 (388)
                      +++.|.| +|.+|..+|..|+++|  .+|++.+|++++++....++.
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~   47 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQ   47 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHH
Confidence            4688899 6899999999999999  799999999988877665554

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=94.82  E-value=0.032  Score=53.27  Aligned_cols=83  Identities=14%  Similarity=0.225  Sum_probs=57.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHHhhhhhh
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMA  107 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~-------------------~~~l~~~~~~l~~~~~~~~~~  107 (388)
                      +.++++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++..+     
T Consensus        31 q~~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp-----  104 (346)
T 1y8q_A           31 QKRLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNP-----  104 (346)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCT-----
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCC-----
Confidence            34567799999996 7999999999999996 78888543                   2466666777766432     


Q ss_pred             cCCCCcccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          108 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                                ..++..+..++++  ...+       .+.+.|++|.+.
T Consensus       105 ----------~v~v~~~~~~~~~--~~~~-------~~~~~dvVv~~~  133 (346)
T 1y8q_A          105 ----------MVDVKVDTEDIEK--KPES-------FFTQFDAVCLTC  133 (346)
T ss_dssp             ----------TSEEEEECSCGGG--CCHH-------HHTTCSEEEEES
T ss_pred             ----------CeEEEEEecccCc--chHH-------HhcCCCEEEEcC
Confidence                      3566666666543  1111       124689998764

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=94.78  E-value=0.041  Score=50.82  Aligned_cols=44  Identities=25%  Similarity=0.374  Sum_probs=38.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ..+++||+++|.|.|+=.|+.+|+.|+.+|++|.++.++...++
T Consensus       156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~  199 (286)
T 4a5o_A          156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA  199 (286)
T ss_dssp             TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH
Confidence            36889999999999888999999999999999999987655544

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.78  E-value=0.13  Score=48.19  Aligned_cols=94  Identities=14%  Similarity=0.102  Sum_probs=56.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +.+++.|.|. |.+|..+|+.|++.|++|++.+|++++.+++.+.    .   .. ...+..+-....  .++..=+.+.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~----g---~~-~~~~~~e~~~~a--DvVi~~vp~~   98 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAAL----G---AT-IHEQARAAARDA--DIVVSMLENG   98 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----T---CE-EESSHHHHHTTC--SEEEECCSSH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC----C---CE-eeCCHHHHHhcC--CEEEEECCCH
Confidence            4567888875 8899999999999999999999999887665332    0   00 000000000112  2333344556


Q ss_pred             HHHHHHHH--HHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSN--FAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~--~i~~~~g~iD~li~nAG  156 (388)
                      ..++.++.  .+.+...+=.++|+...
T Consensus        99 ~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           99 AVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            66776665  45444444456666654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	388
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-36
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-35
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-34
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-33
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	8e-32
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-31
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-31
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-31
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	4e-31
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-31
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	6e-31
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-30
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-30
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-30
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-30
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-30
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-29
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	1e-28
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-28
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-28
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-28
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-28
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	7e-28
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-28
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	8e-28
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	9e-28
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-27
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-27
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-27
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	6e-27
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	8e-27
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-25
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-24
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-24
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-24
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	5e-24
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	7e-24
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-23
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-23
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	8e-23
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-22
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-22
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-22
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-22
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-21
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-21
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-21
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-21
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-20
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-20
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	9e-20
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-19
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-17
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-15
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-15
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	9e-15
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-14
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-13
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	4e-13
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-10
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-10
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-09
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	8e-08
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	9e-08
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.001
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.002
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.002

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 4e-36
 Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 24/242 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG++ G+G A+AR  +  G +VV  +R+  ++     E +     G         
Sbjct: 11  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG--------- 61

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +    CD+    D+  + +   ++   +DI INNAG  +    LL  +    +
Sbjct: 62  ------TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWK 114

Query: 174 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQ 231
            + + N++   +CTREA + M+++    GHI N+   +G       +T  Y +TK  +  
Sbjct: 115 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 174

Query: 232 LQASLFKESKRSKVG--VHTASPGMVLTDLLLSGSTIQNKQMFNIICEL----PETVART 285
           L   L +E + ++        SPG+V T           ++      ++    PE VA  
Sbjct: 175 LTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEA 234

Query: 286 LV 287
           ++
Sbjct: 235 VI 236

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  127 bits (320), Expect = 6e-35
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITGS+ G+G+A A  F   G +V +  R +E +  T  ++         AAG S +
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL--------AAGVSEQ 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNE 170
                  V  +  DV   A   ++ +  + +FG +DI +NNAG        K     + E
Sbjct: 58  N------VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIE 111

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
             +  ++ NL   I  T++A+  +      G I N+    SG  +TP    Y   K  + 
Sbjct: 112 SYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPYYSIAKAAID 169

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDLL 260
           Q   +   +  +  + V++ SPG+V T   
Sbjct: 170 QYTRNTAIDLIQHGIRVNSISPGLVATGFG 199

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  124 bits (313), Expect = 5e-34
 Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 22/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  VITG   G+G+A+A  F + G  + +A            E E  ++      G    
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP------EAEAAIRN----LGR--- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V  + CDV +P DV+      ++ FG  DI +NNAG      P  + T E+ +
Sbjct: 53  ------RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWK 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +    N+    L  +  +  M+    G  I                  Y STK       
Sbjct: 106 KTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI--EAYTHYISTKAANIGFT 163

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L  +  +  + V+  +P +V T   
Sbjct: 164 RALASDLGKDGITVNAIAPSLVRTATT 190

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  122 bits (308), Expect = 2e-33
 Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 26/209 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++TG  RG+G+A+A+ F   G  V +     E       E+ E +            
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-----EVAEAIG----------- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   A    D+ +  +  +    A    G +D+ +NNA         L     E  
Sbjct: 50  -------GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWR 101

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL   +  +  A R MR    GG       +  G  +    A Y ++K GL  L 
Sbjct: 102 RVLEVNLTAPMHLSALAAREMRKV--GGGAIVNVASVQGLFAEQENAAYNASKGGLVNLT 159

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLS 262
            SL  +    ++ V+  +PG + T+ +L 
Sbjct: 160 RSLALDLAPLRIRVNAVAPGAIATEAVLE 188

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  119 bits (299), Expect = 8e-32
 Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 19/210 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITGS+ G+G+  A  F   G  V +  RSSE +  T   +               K
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIIL--------------K 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
             +   +V  +  DV       ++ N  + +FG ID+ +NNAG           T++ I+
Sbjct: 52  SGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGID 111

Query: 174 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
              + +  NL   I  T++    +          +   AG      P    Y   K  L 
Sbjct: 112 IYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ--PDFLYYAIAKAALD 169

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDLL 260
           Q   S   +  +  + V++ SPGMV T   
Sbjct: 170 QYTRSTAIDLAKFGIRVNSVSPGMVETGFT 199

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  118 bits (297), Expect = 1e-31
 Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++TG T+G+G A+  EF   G  +   +R+   +   +++ ++              
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK------------- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 172
                 +V G  CD     + +KL     + F G +DI INN G     KP L +T E+ 
Sbjct: 56  ----GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDF 110

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
              +STNL  +   ++ A  +++    G  IF    AG   +S    ++Y +TK  L QL
Sbjct: 111 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--GSIYSATKGALNQL 168

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 272
             +L  E     +  +  +P ++ T L  +    + K++ 
Sbjct: 169 ARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVV 208

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 2e-31
 Identities = 51/237 (21%), Positives = 83/237 (35%), Gaps = 29/237 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             V+ITG+  G+G+  A EF     ++V+   +   +  T  + +               
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL------------- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                AKV     D     D+   +     E G + I +NNAG       L    + +IE
Sbjct: 55  ----GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV-YTSDLFATQDPQIE 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +    N++     T+  +  M      GHI  +  A +G  S P    Y S+K       
Sbjct: 110 KTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASA-AGHVSVPFLLAYCSSKFAAVGFH 167

Query: 234 ASLFKE---SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
            +L  E    + + V      P  V T  + + ST     +       PE V   L+
Sbjct: 168 KTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL------EPEEVVNRLM 218

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  117 bits (293), Expect = 3e-31
 Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 27/207 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG+ +G+G+   +    SG +VV  +R++  +     E                 
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--------------- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +  +  D+ +    +K    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 51  ------GIEPVCVDLGDWDATEK----ALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFD 99

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +  S NL      ++   R M ++   G I N+    +   + P    Y STK  +  L 
Sbjct: 100 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-TFPNLITYSSTKGAMTMLT 158

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            ++  E    K+ V++ +P +VLTD+ 
Sbjct: 159 KAMAMELGPHKIRVNSVNPTVVLTDMG 185

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (293), Expect = 4e-31
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 24/207 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + VV+TG  RG+G  + R F+ SG RVV+  +     R    EL                
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--------------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     I CDV +  DV+ L +  +  FG +D  +NNAG +   +   + + +   
Sbjct: 52  ------GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFR 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           Q++  NL+G+   T+ A+  +R     G++ N+     G         Y +TK  +  + 
Sbjct: 106 QLLELNLLGTYTLTKLALPYLRKS--QGNVINISSL-VGAIGQAQAVPYVATKGAVTAMT 162

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L  +     V V+  SPG + T L 
Sbjct: 163 KALALDESPYGVRVNCISPGNIWTPLW 189

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  116 bits (292), Expect = 6e-31
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 21/208 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG +RG+G  +  E    G  V   SR+ + +   +T+                 
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK------------- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 172
                 KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+ 
Sbjct: 56  ----GFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDY 110

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
             I+S N   +   +  A   ++   +G  +F    +G+     P  AVYG+TK  + QL
Sbjct: 111 SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA--VPYEAVYGATKGAMDQL 168

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
              L  E  +  + V+   PG++ T L+
Sbjct: 169 TRCLAFEWAKDNIRVNGVGPGVIATSLV 196

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  116 bits (291), Expect = 6e-31
 Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 22/209 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG T G+G A+A +F+  G +V++  R S+        +                
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-------------- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 ++     D  +     KL +     FG +   +NNAG     K + + T  E  
Sbjct: 53  ----PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWR 107

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++++ NL G    TR  ++ M+++  G  I NM     G    P    Y ++K  +R + 
Sbjct: 108 KLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI-EGFVGDPSLGAYNASKGAVRIMS 166

Query: 234 ASLFKES--KRSKVGVHTASPGMVLTDLL 260
            S   +   K   V V+T  PG + T L+
Sbjct: 167 KSAALDCALKDYDVRVNTVHPGYIKTPLV 195

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  115 bits (288), Expect = 1e-30
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 32/239 (13%)

Query: 56  VVITGSTRGLGKALAREFLLSGDR-------VVVASRSSESVRMTVTELEENLKEGMMAA 108
           ++ITG+ +G+G+A+A EF  +          +V++SR++  +     E            
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-------- 55

Query: 109 GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 168
                     A    I  D+ + ADV++L+   V  +G ID  +NN      F  L   T
Sbjct: 56  ---------GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNN-AGVGRFGALSDLT 105

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
            E+ +  ++TNL G+   T+    +M  Q  G   F    A +       +++Y  +K G
Sbjct: 106 EEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF--RHSSIYCMSKFG 163

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
            R L  ++   +++  V +    PG V T +           M       PE +A  +V
Sbjct: 164 QRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMM-----PEDIAAPVV 217

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  115 bits (289), Expect = 1e-30
 Identities = 66/239 (27%), Positives = 100/239 (41%), Gaps = 28/239 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG  RGLG   AR+ + +G RVV+A    E    T  EL +              
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD-------------- 51

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                        DV    D Q++  +A  EFGS+D  +NNAG + G   L   + E   
Sbjct: 52  ------AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFR 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++V  NL G  +  +  +  M+D   GG I N+  A  G     LT+ YG++K G+R L 
Sbjct: 105 KVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAA-GLMGLALTSSYGASKWGVRGLS 162

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII-----CELPETVARTLV 287
                E    ++ V++  PGM  T +       Q +  +           P  +A  +V
Sbjct: 163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV 221

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 2e-30
 Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 24/242 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG   G+GKA+ +E L  G  VV+ASR  E ++    EL+ NL            
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK-------- 64

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A+V  I C++    +V  L    ++ FG I+  +NN G      P    +++   
Sbjct: 65  ----QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWH 119

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++ TNL G+    +        +  G  +  +    +G    PL    G+ + G+  L 
Sbjct: 120 AVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---PLAVHSGAARAGVYNLT 176

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL--------PETVART 285
            SL  E   S + ++  +PG++ +   +       +  F    +         PE V+  
Sbjct: 177 KSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSV 236

Query: 286 LV 287
           + 
Sbjct: 237 VC 238

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  115 bits (289), Expect = 2e-30
 Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 17/208 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           ++V+ITGS+ G+G++ A  F   G +V +  R+ + +  T  ++          AG  ++
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL--------KAGVPAE 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN-KGFKPLLQFTNEEI 172
                 K+  +  DV E +    + N  + +FG IDI +NNAG N            E  
Sbjct: 57  ------KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELY 110

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++    N    I  T++           G I N+    +G  +      Y   K  L Q 
Sbjct: 111 QKTFKLNFQAVIEMTQKTK--EHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQY 168

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
                 +  +  V V++ SPG V T  +
Sbjct: 169 TRCTAIDLIQHGVRVNSVSPGAVATGFM 196

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  115 bits (288), Expect = 2e-30
 Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 20/236 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG   G+G+  A+ F+  G +VV+A  + +  +     +                
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP------------- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEI 172
                  ++ + CDV +  DV+ L +  + + G +DI   N G        +L+  NE+ 
Sbjct: 54  -----DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF 108

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           ++++  N+ G+ L  + A RVM    K G I       S  +   ++ VY +TK  +  L
Sbjct: 109 KRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGL 167

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 288
             SL  E     + V+  SP +V + LL     + + ++  +  +        L  
Sbjct: 168 TTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA 223

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 2e-29
 Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 27/210 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ +G+G+A A   LL G +V +   + E+       L E  +           
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ--------- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K   I CDV +   ++      V+ FG +DI +NNAG             +  E
Sbjct: 55  ------KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV---------NNEKNWE 99

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + +  NLV  I  T   +  M  Q  G G I     + +G        VY ++K G+   
Sbjct: 100 KTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGF 159

Query: 233 --QASLFKESKRSKVGVHTASPGMVLTDLL 260
              A+L      S V ++   PG V T +L
Sbjct: 160 TRSAALAANLMNSGVRLNAICPGFVNTAIL 189

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  111 bits (279), Expect = 1e-28
 Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 14/206 (6%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V++TG+  GLG+A A  F   G  VVV                +    G  ++     
Sbjct: 8   RVVLVTGAGGGLGRAYALAFAERGALVVVNDLG-----------GDFKGVGKGSSAADKV 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
              +  +      +       +KL   A++ FG ID+ +NNAG     +   + ++E+ +
Sbjct: 57  VEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWD 115

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            I   +L GS   TR A   M+ Q   G I     A SG       A Y + K GL  L 
Sbjct: 116 IIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASA-SGIYGNFGQANYSAAKLGLLGLA 173

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
            +L  E +++ +  +T +P       
Sbjct: 174 NTLVIEGRKNNIHCNTIAPNAGSRMT 199

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  109 bits (274), Expect = 2e-28
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 18/207 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R  ++TG +RGLG  +A+    +G  VVVASR+ E       +L E              
Sbjct: 6   RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY------------ 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +     CDV    +V+KL      +FG +D  +N AG N+   P  +F  +E  
Sbjct: 54  ----GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFR 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           Q++  NL G+    REA  ++R+      I           + P  + Y ++K G+  L 
Sbjct: 109 QVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPNISAYAASKGGVASLT 167

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L KE  R  + V+  +PG   T + 
Sbjct: 168 KALAKEWGRYGIRVNVIAPGWYRTKMT 194

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  109 bits (274), Expect = 2e-28
 Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 22/237 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  + TG+ RG+G+ +A E    G  VVV   SS        +  E +   +   G    
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS-------KAAEEVVAELKKLGA--- 56

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   I  D+ +P++V  L + AV+ FG +D  ++N+G    +   L+ T E  +
Sbjct: 57  ------QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFD 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N  G     ++ ++  R   +GG I       +  +  P  A+Y  +K  +    
Sbjct: 110 KVFNLNTRGQFFVAQQGLKHCR---RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFC 166

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 290
            +   +     V V+  +PG V TD+    S   +           E +   L    
Sbjct: 167 RAFAVDCGAKGVTVNCIAPGGVKTDMFDENS--WHYAPGGYKGMPQEKIDEGLANMN 221

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  109 bits (273), Expect = 2e-28
 Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 17/207 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V+ITG   GLG+A A      G ++ +   SSE +  +   + E   +          
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA--------- 55

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +V     DV + A V+         FG ID + NNAG      P   FT  E +
Sbjct: 56  ------EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFD 109

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++VS NL G  L   + +++MR+Q  G  +      G  G      + Y + K G+  L 
Sbjct: 110 KVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--GNQSGYAAAKHGVVGLT 167

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +   E  R  + ++  +PG + T ++
Sbjct: 168 RNSAVEYGRYGIRINAIAPGAIWTPMV 194

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  108 bits (272), Expect = 3e-28
 Identities = 46/243 (18%), Positives = 91/243 (37%), Gaps = 35/243 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +NV+   +  G+G   +RE +    +  V     E+           L E          
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN--------PTALAELKAINPK--- 54

Query: 114 KNLVHAKVAGIACDVCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  +     DV  P A+ +KL     ++  ++DI IN AG            + +I
Sbjct: 55  -----VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQI 100

Query: 173 EQIVSTNLVGSILCTREAMR--VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 230
           E+ ++ N  G +  T   +     R    GG I N+    +G ++     VY ++K  + 
Sbjct: 101 ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV-TGFNAIHQVPVYSASKAAVV 159

Query: 231 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN------KQMFNIICELPETVAR 284
               SL K +  + V  ++ +PG+  T L+ + ++  +      + + +   +  E   +
Sbjct: 160 SFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQ 219

Query: 285 TLV 287
             V
Sbjct: 220 NFV 222

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  108 bits (270), Expect = 7e-28
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 18/205 (8%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+T G+G  +AR     G RV V +R  E +R T+ EL E                
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--------------- 49

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +  G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    +
Sbjct: 50  --GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDV 106

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           V TNL G    T++ ++      +G        +  G       A Y ++K G+     +
Sbjct: 107 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKA 166

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           L  E  R+ + V+   PG V T + 
Sbjct: 167 LGLELARTGITVNAVCPGFVETPMA 191

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  108 bits (269), Expect = 7e-28
 Identities = 40/256 (15%), Positives = 83/256 (32%), Gaps = 47/256 (18%)

Query: 53  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 112
           P +VV+TG+ RG+G  L ++ +   +   + + + +          E   E         
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD---------VEKATE--------- 44

Query: 113 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS--IDIWINNAGTNKGFKPLLQFTNE 170
            K++  ++V  +   V     +    +      GS  + + INNAG    +    +    
Sbjct: 45  LKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI----------------FNMDGAGSGGS 214
            I + +  N    +L T++ + ++++                              + GS
Sbjct: 105 VIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGS 164

Query: 215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI 274
           +      Y  +K  +     +L  + K   V V    PG V T+L    + +        
Sbjct: 165 AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALT------- 217

Query: 275 ICELPETVARTLVPRI 290
                E     L+   
Sbjct: 218 ----VEQSTAELISSF 229

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (269), Expect = 8e-28
 Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 27/206 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V++TG+ +G+G+   +    +G RVV  SR+   +   V E                 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--------------- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  +  +  D+ +    ++    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 53  ------GIEPVCVDLGDWEATER----ALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFD 101

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +    NL   I  ++   R +  +   G I N+        +    +VY STK  L  L 
Sbjct: 102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC-SQRAVTNHSVYCSTKGALDMLT 160

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDL 259
             +  E    K+ V+  +P +V+T +
Sbjct: 161 KVMALELGPHKIRVNAVNPTVVMTSM 186

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  108 bits (270), Expect = 9e-28
 Identities = 54/241 (22%), Positives = 91/241 (37%), Gaps = 28/241 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             V+ITG   GLG+AL   F+  G +V V  +S+E +    T+  +N             
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN------------- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  V GI  DV    D ++ ++  V  FG ID  I NAG       L+    E ++
Sbjct: 53  -------VLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLD 105

Query: 174 ----QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 229
               ++   N+ G I   +  +  +    +G  IF +  AG   +      +Y + K  +
Sbjct: 106 AAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPN--GGGPLYTAAKHAI 162

Query: 230 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 289
             L   L  E     V V+    G + +DL    S     +  + +       +   + R
Sbjct: 163 VGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR 221

Query: 290 I 290
           +
Sbjct: 222 M 222

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  107 bits (268), Expect = 1e-27
 Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 26/209 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG   G+G  + +  L  G +V  +  +  + +    EL E              
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE-------------- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +  DV   AD   +        G++++ +NNAG       +     E+  
Sbjct: 53  ------RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFS 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  N     +  ++ +  M++   GG I NM    S        A Y ++K  +  L 
Sbjct: 106 RLLKINTESVFIGCQQGIAAMKET--GGSIINMASV-SSWLPIEQYAGYSASKAAVSALT 162

Query: 234 ASLFKE--SKRSKVGVHTASPGMVLTDLL 260
            +       +   + V++  P  + T ++
Sbjct: 163 RAAALSCRKQGYAIRVNSIHPDGIYTPMM 191

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  106 bits (266), Expect = 2e-27
 Identities = 49/238 (20%), Positives = 85/238 (35%), Gaps = 30/238 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V+ITG+  G+G+A    F   G R+V        +R     +                
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---------------- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV +PA V++    A+   G +D  ++ AG         +   E+ E
Sbjct: 50  ------GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWE 102

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++  NL GS L  + A   MR++  G  +     A          A Y ++  G+  L 
Sbjct: 103 LVLRVNLTGSFLVAKAASEAMREKNPGSIVLT---ASRVYLGNLGQANYAASMAGVVGLT 159

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 287
            +L  E  R  + V+T +PG + T +         ++            P  VA   +
Sbjct: 160 RTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL 217

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 5e-27
 Identities = 54/279 (19%), Positives = 106/279 (37%), Gaps = 34/279 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++TG+++G+G+ +A      G  VVV +RS E+++  V+   E              
Sbjct: 15  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE-------------- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
             L  A    IA  + +    ++    A    G +D+ I N  TN     L       + 
Sbjct: 61  --LGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN-TSLNLFHDDIHHVR 117

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           + +  N +  ++ T  A+ +++     G I  +  + +G  + P+ A Y ++K  L    
Sbjct: 118 KSMEVNFLSYVVLTVAALPMLKQ--SNGSIVVV-SSLAGKVAYPMVAAYSASKFALDGFF 174

Query: 234 ASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 291
           +S+ KE    R  V +     G++ T+  +         + ++     E  A  ++    
Sbjct: 175 SSIRKEYSVSRVNVSITLCVLGLIDTETAMK----AVSGIVHMQAAPKEECALEIIKGGA 230

Query: 292 -----VVKGSGKAINYLT---PPRILLALVTAWLRRGRW 322
                V   S      L      +IL  L +      R+
Sbjct: 231 LRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDRF 269

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  105 bits (263), Expect = 6e-27
 Identities = 47/238 (19%), Positives = 89/238 (37%), Gaps = 20/238 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+   +G A A      G  + +   + E++      + E              
Sbjct: 6   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK------------- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +     CDV     V    +  V +FG ID   NNAG    F P+  + +++  
Sbjct: 53  ----GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFA 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++++ N+ G+    +   R M  Q  G  +     AG  G   P  A YG++K  +  L 
Sbjct: 109 RVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALT 166

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGST-IQNKQMFNIICELPETVARTLVPRI 290
            +   +     + V+  SPG +    +      +Q K         P+ VA+ ++  +
Sbjct: 167 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  105 bits (263), Expect = 8e-27
 Identities = 47/213 (22%), Positives = 74/213 (34%), Gaps = 23/213 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + +++TG  RG+G A  R    +G  V V  RS+        ++ +              
Sbjct: 10  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG----------- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K     CDV     V K       + G I   I NAG +   KP  + T+E+  
Sbjct: 59  -----VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFA 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFN------MDGAGSGGSSTPLTAVYGSTKC 227
            +   N+ G     R   ++   + + G I             S  + +     Y S+K 
Sbjct: 113 FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKA 172

Query: 228 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
               L   L  E   + + V+  SPG V TD  
Sbjct: 173 ACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT 205

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  101 bits (252), Expect = 2e-25
 Identities = 29/205 (14%), Positives = 58/205 (28%), Gaps = 25/205 (12%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++T      G   A     +G  V     S +       + +E                
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-------QKDE---------------- 39

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
           L                +  +L     + +G +D+ ++N      F+P+ ++  E+    
Sbjct: 40  LEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA 99

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           V    +            M+ +  G  IF               + Y S + G   L  +
Sbjct: 100 VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF--GPWKELSTYTSARAGACTLANA 157

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
           L KE     + V    P  + ++  
Sbjct: 158 LSKELGEYNIPVFAIGPNYLHSEDS 182

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 98.6 bits (245), Expect = 2e-24
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 21/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITG+  G+GK +A  F  +G  VVV+  ++++    V E++          GG   
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ--------QLGG--- 60

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +     CD+    ++  L++FA+++ G +DI +NNAG              +  
Sbjct: 61  ------QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFR 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +    N+      ++  +     +  GG +     + +  +       Y S+K     L 
Sbjct: 113 RAYELNVFSFFHLSQ--LVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLV 170

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            ++  +     + V+  +PG +LTD L
Sbjct: 171 RNMAFDLGEKNIRVNGIAPGAILTDAL 197

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 98.7 bits (245), Expect = 3e-24
 Identities = 52/241 (21%), Positives = 91/241 (37%), Gaps = 18/241 (7%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+TGST G+G  +A      G  +V+                E ++ G+ A  G   
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHG--- 54

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV     D+ +   V+ L + AV + G IDI +NN    +    +  F  E+ +
Sbjct: 55  -----VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNN-AGIQHTALIEDFPTEKWD 108

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            I++ NL      T  A+  M+ Q   G I N+  A  G  ++   + Y + K G+    
Sbjct: 109 AILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASA-HGLVASANKSAYVAAKHGVVGFT 166

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 293
                E+    +  +   PG V T L+    +   ++           +     P ++ V
Sbjct: 167 KVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFV 226

Query: 294 K 294
            
Sbjct: 227 T 227

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.8 bits (245), Expect = 3e-24
 Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 60/251 (23%)

Query: 51  AGPRNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 109
           +G    ++TG  +G+G A+ R+   L    VV+ +R     +  V +L+           
Sbjct: 1   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--------- 51

Query: 110 GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 169
                            D+ +   ++ L +F   E+G +D+ +NNAG            +
Sbjct: 52  --------GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFH 102

Query: 170 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--------- 220
            + E  + TN  G+     E + +++ Q +  ++ ++    +  S +P            
Sbjct: 103 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 162

Query: 221 ----------------------------VYGSTKCGL----RQLQASLFKESKRSKVGVH 248
                                        YG TK G+    R     L ++ K  K+ ++
Sbjct: 163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLN 222

Query: 249 TASPGMVLTDL 259
              PG V TD+
Sbjct: 223 ACCPGWVRTDM 233

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 97.1 bits (241), Expect = 5e-24
 Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 26/207 (12%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + +++TG+  G+G+A    F   G  +V   R    +   V  LE               
Sbjct: 6   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--------------- 50

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A+   +  DV +P  V+ +   A+ EFG +    + AG             E  E
Sbjct: 51  -----AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSWNLPLEAWE 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++  NL GS L  R+A  V+ +        ++ G G+ G      A Y + K G+  L 
Sbjct: 105 KVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG-----LAHYAAGKLGVVGLA 159

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L  E  R  V V+   PG++ T + 
Sbjct: 160 RTLALELARKGVRVNVLLPGLIQTPMT 186

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 97.5 bits (242), Expect = 7e-24
 Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 20/207 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ RG+G+ +A E    G +V+V   +S        E  E +   +   G    
Sbjct: 19  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANST-------ESAEEVVAAIKKNGS--- 68

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   A +  +V    D+ ++   AV  FG +DI  +N+G    F  +   T EE +
Sbjct: 69  ------DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFD 121

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N  G     REA + +      G +  M        + P  AVY  +K  +    
Sbjct: 122 RVFTINTRGQFFVAREAYKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFA 178

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
             +  +    K+ V+  +PG + TD+ 
Sbjct: 179 RCMAIDMADKKITVNVVAPGGIKTDMY 205

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 96.7 bits (240), Expect = 1e-23
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + VVITGS+ GLGK++A  F     +VVV  RS E       +   ++ E +   GG   
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE-------DEANSVLEEIKKVGG--- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  
Sbjct: 58  ------EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWN 110

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +++ TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ + 
Sbjct: 111 KVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS-VHEKIPWPLFVHYAASKGGMKLMT 169

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L  E     + V+   PG + T + 
Sbjct: 170 ETLALEYAPKGIRVNNIGPGAINTPIN 196

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 95.9 bits (238), Expect = 2e-23
 Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 24/234 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +++G  RG+G +  R  +  G +VV      E  +    EL +              
Sbjct: 7   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD-------------- 52

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     +  DV +PA  +   + AV  FG + + +NNAG       +  +   E +
Sbjct: 53  ------AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQ 105

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           +I+  NL G  L  R  ++ M++  +G  I        G + T     Y +TK  +R L 
Sbjct: 106 RILDVNLTGVFLGIRAVVKPMKEAGRGSIINISS--IEGLAGTVACHGYTATKFAVRGLT 163

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
            S   E   S + V++  PG+V T +         +       E P  V+  +V
Sbjct: 164 KSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAE-PVEVSNLVV 216

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 94.4 bits (234), Expect = 8e-23
 Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 21/208 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              ++TG ++G+G A+  E    G RV   SR+ + +   +    E              
Sbjct: 7   TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK------------- 53

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 172
                  V G  CD+    +  KL     + F G ++I +NNA      K    FT ++ 
Sbjct: 54  ----GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA-GVVIHKEAKDFTEKDY 108

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
             I+ TN   +   ++ A  +++    G  IF    AG     +   ++Y ++K  + Q+
Sbjct: 109 NIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV--SLYSASKGAINQM 166

Query: 233 QASLFKESKRSKVGVHTASPGMVLTDLL 260
             SL  E  +  + V++ +PG++LT L+
Sbjct: 167 TKSLACEWAKDNIRVNSVAPGVILTPLV 194

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.7 bits (232), Expect = 1e-22
 Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 35/252 (13%)

Query: 54  RNVVITGSTRGLGKALAREF---LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 110
              V+TG++RG G+ALA +    L  G  ++V++RS   +R    EL     +       
Sbjct: 7   AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL------ 60

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQK----LSNFAVNEFGSIDIWINNA--GTNKGFKPL 164
                    KV   A D+   A VQ+    +      E     + INNA    +     L
Sbjct: 61  ---------KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFL 111

Query: 165 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGS 224
                 E+    + NL   +  T   +   +D P          +           +Y +
Sbjct: 112 NVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCA 171

Query: 225 TKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL----LSGSTIQNKQMFNIICEL-- 278
            K     L   L  E     V V + +PG +  D+      +    + +     +     
Sbjct: 172 GKAARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGA 229

Query: 279 ---PETVARTLV 287
                T A+ L+
Sbjct: 230 LVDCGTSAQKLL 241

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 92.9 bits (230), Expect = 2e-22
 Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 27/238 (11%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG++RG+G+A+A      G +V+  + S    +     L                
Sbjct: 5   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--------------- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                A   G+  +V +PA ++ +      EFG +DI +NNAG  +     ++  +EE  
Sbjct: 50  -----ANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKDEEWN 103

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            I+ TNL      ++  MR M  + + G I  + G+  G       A Y + K GL    
Sbjct: 104 DIIETNLSSVFRLSKAVMRAMMKK-RHGRIITI-GSVVGTMGNGGQANYAAAKAGLIGFS 161

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 287
            SL +E     + V+  +PG + TD+  + S  Q   +   +        + +A  + 
Sbjct: 162 KSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVA 219

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 92.2 bits (228), Expect = 4e-22
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  +ITGS RG+G+A A  ++  G RV +A  + E+ R T  E+                
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---------------- 49

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                     IA DV + A + +     ++ +GSIDI +NN        P+++ T E  +
Sbjct: 50  ----GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNN-AALFDLAPIVEITRESYD 104

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++ + N+ G++   +   R M    +GG I NM     G     L  VY +TK  +  L 
Sbjct: 105 RLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQA-GRRGEALVGVYCATKAAVISLT 163

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            S      R  + V+  +PG+V  +  
Sbjct: 164 QSAGLNLIRHGINVNAIAPGVVDGEHW 190

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 92.0 bits (228), Expect = 5e-22
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 24/238 (10%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  ++TG+ RG+G+ +A+    S   V+  SR+ +S    V E++               
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF------------- 57

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 + +G A DV +  ++ ++ N  + E  ++DI +NNAG  +     L+  N+E E
Sbjct: 58  ----GYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF-LRMKNDEWE 112

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            ++ TNL      T+   + M +  + G I N+  +  G +     A Y S+K G+    
Sbjct: 113 DVLRTNLNSLFYITQPISKRMINN-RYGRIINI-SSIVGLTGNVGQANYSSSKAGVIGFT 170

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 287
            SL KE     + V+  +PG + +D+    S    K + + I       PE VA    
Sbjct: 171 KSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLAC 228

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 90.2 bits (223), Expect = 2e-21
 Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 23/236 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           VV+TG++RG+GKA+A     +G +V+V    S        +  E + + + A GG     
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSA-------KAAEEVSKQIEAYGG----- 51

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
               +      DV + ADV+ +   A++ +G+ID+ +NNAG  +     ++    + +++
Sbjct: 52  ----QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLL-IRMKKSQWDEV 106

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  NL G  LCT+ A ++M  + + G I N+  +  G       A Y + K G+     +
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKK-RKGRIINI-ASVVGLIGNIGQANYAAAKAGVIGFSKT 164

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 287
             +E     + V+   PG + +D+         K++   I       PE VA  + 
Sbjct: 165 AAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVE 220

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 90.6 bits (224), Expect = 2e-21
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 19/205 (9%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            ++TG+ +G+GKA+A   +  G  V +A  +  + +   +E+ +                
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--------------- 48

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   +  DV +   V      A    G  D+ +NNAG      P+   T E ++++
Sbjct: 49  --GGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKV 105

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
            + N+ G I   + A+   + +  GG I N     +G    P  AVY S+K  +R L  +
Sbjct: 106 YNINVKGVIWGIQAAVEAFKKEGHGGKIINACS-QAGHVGNPELAVYSSSKFAVRGLTQT 164

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL 260
             ++     + V+   PG+V T + 
Sbjct: 165 AARDLAPLGITVNGYCPGIVKTPMW 189

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 90.6 bits (224), Expect = 3e-21
 Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 18/205 (8%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +   ITG   GLGK +       G + V+ASR  + ++ T  ++                
Sbjct: 26  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN---------- 75

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV  I CDV +P  VQ   +  +   G  +I INNA  N    P  + +    +
Sbjct: 76  ------KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWK 128

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            I    L G+   T E  + +    KG    ++    +   S  +     S K G+  + 
Sbjct: 129 TITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP-SASAKAGVEAMS 187

Query: 234 ASLFKESKRSKVGVHTASPGMVLTD 258
            SL  E  +  +  +   PG + T 
Sbjct: 188 KSLAAEWGKYGMRFNVIQPGPIKTK 212

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.2 bits (220), Expect = 8e-21
 Identities = 53/299 (17%), Positives = 88/299 (29%), Gaps = 46/299 (15%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V+ITG + G+G  LA        +      +   ++ T   L E  +      G      
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK-TQGRLWEAARALACPPG------ 57

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                +  +  DV +   V                 +          PL     + +  +
Sbjct: 58  ----SLETLQLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASV 110

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
           +  N+VG++   +  +  M+ +  G  +      G  G   P   VY ++K  L  L  S
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL--PFNDVYCASKFALEGLCES 168

Query: 236 LFKESKRSKVGVHTASPGMVLTDLL---------------------LSGSTIQNKQMFNI 274
           L        V +     G V T  +                            +KQ+F  
Sbjct: 169 LAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE 228

Query: 275 ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAA 333
             + PE VA   +     ++     + Y T  R L       LR  R  D  G     A
Sbjct: 229 AAQNPEEVAEVFL---TALRAPKPTLRYFTTERFL-----PLLRM-RLDDPSGSNYVTA 278

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 87.4 bits (216), Expect = 2e-20
 Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 35/207 (16%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + V++  ++RG+G+A+A      G  V + +R+           EE LK           
Sbjct: 5   KGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----------EELLKR---------- 43

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   +G    VC   D++K  +    +   +DI + NAG  K      + TNE+ +
Sbjct: 44  --------SGHRYVVC---DLRKDLDLLFEKVKEVDILVLNAGGPK-AGFFDELTNEDFK 91

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           + + +  +  I   R  +  M+++  G  +     +              S +  L    
Sbjct: 92  EAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP--IENLYTSNSARMALTGFL 149

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            +L  E     + V+  +PG   T+ +
Sbjct: 150 KTLSFEVAPYGITVNCVAPGWTETERV 176

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 88.0 bits (217), Expect = 2e-20
 Identities = 44/226 (19%), Positives = 67/226 (29%), Gaps = 26/226 (11%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
            VITG  R +G ++A      G RVVV  R SE          + L   + AA   S   
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE-------GAAQRLVAELNAARAGS--- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                   ++         + + + +   FG  D+ +NNA       PLL   +      
Sbjct: 54  -AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAAD 111

Query: 176 VST-----------NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS---STPLTAV 221
                         N V  +   R   R   +                       P   V
Sbjct: 112 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCV 171

Query: 222 YGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 267
           Y   K  L  L  +   E     + V+  +PG+ L    +   T +
Sbjct: 172 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 217

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 9e-20
 Identities = 43/207 (20%), Positives = 78/207 (37%), Gaps = 28/207 (13%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           + +++T + +G+G+A A  F   G +V+    +           E  L+E          
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----------ESKLQE---------- 45

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 K  GI   V +    +++  F  NE   +D+  N AG       +L    ++ +
Sbjct: 46  ----LEKYPGIQTRVLDVTKKKQIDQF-ANEVERLDVLFNVAGFV-HHGTVLDCEEKDWD 99

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
             ++ N+    L  +  +  M  Q   G+I NM    S         VY +TK  +  L 
Sbjct: 100 FSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLT 158

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLL 260
            S+  +  +  +  +   PG V T  L
Sbjct: 159 KSVAADFIQQGIRCNCVCPGTVDTPSL 185

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 84.8 bits (209), Expect = 1e-19
 Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 35/238 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+V++TG  RG+G A+A+     G +V V  R S +                        
Sbjct: 8   RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------- 44

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                  + G+  DV +   V +         G +++ ++NA        L++ T E+ E
Sbjct: 45  -----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA-GLSADAFLMRMTEEKFE 98

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
           ++++ NL G+    + A R M+    G  IF    +G  G      A Y ++K G+  + 
Sbjct: 99  KVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--ANYAASKAGVIGMA 156

Query: 234 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 287
            S+ +E  ++ V  +  +PG + TD+  +      +     I       P  VA  + 
Sbjct: 157 RSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVS 214

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 79.0 bits (193), Expect = 2e-17
 Identities = 39/223 (17%), Positives = 75/223 (33%), Gaps = 35/223 (15%)

Query: 54  RNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 110
            +++ITG  RGLG  L +  L        +    R+ E  +    ELE+  K        
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK----ELEDLAKNHSN---- 54

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQK--LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 168
                     +  +  D+       K       V +   +++  NNAG       +    
Sbjct: 55  ----------IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVR 104

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG------------HIFNMDGAGSGGSST 216
           ++E+   + TN V  I+  +  + +++   K                 +       G++ 
Sbjct: 105 SQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD 164

Query: 217 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 259
                Y ++K  L     SL  +    ++   +  PG V TD+
Sbjct: 165 GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.2 bits (176), Expect = 3e-15
 Identities = 30/207 (14%), Positives = 56/207 (27%), Gaps = 31/207 (14%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R V++ G    LG    + F      V                                 
Sbjct: 3   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN------------------------- 37

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
           +    + +  +     E AD        +     +D  +  AG   G     +   +  +
Sbjct: 38  EEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCD 97

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
            +   ++  S + +  A + +++           GA +    TP    YG  K  + QL 
Sbjct: 98  LMWKQSIWTSTISSHLATKHLKEGGLLTLA----GAKAALDGTPGMIGYGMAKGAVHQLC 153

Query: 234 ASLFKE--SKRSKVGVHTASPGMVLTD 258
            SL  +     S        P  + T 
Sbjct: 154 QSLAGKNSGMPSGAAAIAVLPVTLDTP 180

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 71.4 bits (174), Expect = 7e-15
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 35/208 (16%)

Query: 55  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 114
            V++ G    LG A+   F  +G  V+    S+                           
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------------------- 40

Query: 115 NLVHAKVAGIACDVCEPADVQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEI 172
                    +  +       Q +     +  +   +D     AG   G     +   +  
Sbjct: 41  ----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNA 96

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 232
           + ++  ++  S +  + A   ++       +  + GA +    TP    YG  K  +  L
Sbjct: 97  DLMIKQSVWSSAIAAKLATTHLKPG----GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHL 152

Query: 233 QASLFKE--SKRSKVGVHTASPGMVLTD 258
            +SL  +         V T  P  + T 
Sbjct: 153 TSSLAAKDSGLPDNSAVLTIMPVTLDTP 180

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (173), Expect = 9e-15
 Identities = 39/212 (18%), Positives = 66/212 (31%), Gaps = 21/212 (9%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
              VITG   GLG A A   +  G   V+    +        +L  N             
Sbjct: 6   LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA------- 58

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                      +    + A       F   +       I  A      K     T E+ +
Sbjct: 59  --------DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ 110

Query: 174 QIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
           +++  NL+G+    R     M         + G I N   + +        A Y ++K G
Sbjct: 111 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINT-ASVAAFEGQVGQAAYSASKGG 169

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMVLTDLL 260
           +  +   + ++     + V T +PG+  T LL
Sbjct: 170 IVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 70.6 bits (172), Expect = 1e-14
 Identities = 51/247 (20%), Positives = 83/247 (33%), Gaps = 44/247 (17%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           R+ ++TG   GLG+A A      G RVVV     E                         
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------------------ 37

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL---LQFTNE 170
                  +  +  DV    DV++ +     E   +   ++ AG     K L        E
Sbjct: 38  -----EDLIYVEGDVTREEDVRR-AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLE 91

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGST 225
              +++  NL+G+    R A   MR+ P     + G I N   + +        A Y ++
Sbjct: 92  SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNT-ASVAAFEGQIGQAAYAAS 150

Query: 226 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-----PE 280
           K G+  L     +E     + V T +PG+  T LL          +   +        PE
Sbjct: 151 KGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPE 210

Query: 281 TVARTLV 287
             A  ++
Sbjct: 211 EYAALVL 217

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 68.2 bits (165), Expect = 1e-13
 Identities = 25/186 (13%), Positives = 52/186 (27%), Gaps = 8/186 (4%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL--EENLKEGMMAAGGSSK 113
            ++TG+ + LG+++A      G  V +    S +    ++           +      S 
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                   A  +  V       +L       +G  D+ +NNA +     PLL+   +  E
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHE 123

Query: 174 QI-----VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
                          +  +         +     +        G + + +  V   T   
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 229 LRQLQA 234
           L     
Sbjct: 184 LLGYTI 189

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.4 bits (161), Expect = 4e-13
 Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 27/207 (13%)

Query: 54  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 111
           +  ++ G  + R LG A+A +   +G  V ++ ++          L    ++   A GG+
Sbjct: 9   KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER--------LRPEAEKLAEALGGA 60

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFT 168
                          DV +  ++  L       FG +D  ++              +   
Sbjct: 61  LLFR----------ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTR 110

Query: 169 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 228
            ++    +  +    +   R A  ++    +GG I  +    +     P   V    K  
Sbjct: 111 RQDWLLALEVSAYSLVAVARRAEPLL---REGGGIVTL-TYYASEKVVPKYNVMAIAKAA 166

Query: 229 LRQLQASLFKESKRSKVGVHTASPGMV 255
           L      L  E     V V+  S G V
Sbjct: 167 LEASVRYLAYELGPKGVRVNAISAGPV 193

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.4 bits (139), Expect = 4e-10
 Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 22/222 (9%)

Query: 56  VVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             I G   T G G  +A+E      +++                       M+       
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 114 KNLVHAKVA---------------GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN 158
             L                         ++ +   ++ ++N    ++G I++ +++    
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANA 124

Query: 159 KGF-KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP 217
           K   K LL  + +     +S +    I   +  + +M+ Q     I ++    S      
Sbjct: 125 KEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS---SIISLTYHASQKVVPG 181

Query: 218 LTAVYGSTKCGLRQLQASLFKE-SKRSKVGVHTASPGMVLTD 258
                 S K  L      L     +   + ++T S G + + 
Sbjct: 182 YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 57.6 bits (138), Expect = 4e-10
 Identities = 18/154 (11%), Positives = 41/154 (26%), Gaps = 43/154 (27%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
             +VI+G   G+G A  +    +G ++V        V                       
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------- 38

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 172
                        D+      ++     + +    +D  +  AG        L    + +
Sbjct: 39  -----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG--------LGPQTKVL 79

Query: 173 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 206
             +VS N  G+       +  ++   +   +   
Sbjct: 80  GNVVSVNYFGATELMDAFLPALKKGHQPAAVVIS 113

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 54.9 bits (131), Expect = 3e-09
 Identities = 29/207 (14%), Positives = 59/207 (28%), Gaps = 20/207 (9%)

Query: 54  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 111
           + +++TG  S   +   +A+     G  +    ++         +L+  ++E     G  
Sbjct: 6   KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND--------KLKGRVEEFAAQLGSD 57

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                  A+ A I     E   V    +  V+            G       +   T E 
Sbjct: 58  IVLQCDVAEDASIDTMFAELGKVWPKFDGFVH------SIGFAPGDQLDGDYVNAVTREG 111

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
            +     +    +   +    ++     G  +  +   G    + P   V G  K  L  
Sbjct: 112 FKIAHDISSYSFVAMAKACRSML---NPGSALLTLSYLG-AERAIPNYNVMGLAKASLEA 167

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTD 258
               +        V V+  S G + T 
Sbjct: 168 NVRYMANAMGPEGVRVNAISAGPIRTL 194

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 52.6 bits (125), Expect = 1e-08
 Identities = 21/183 (11%), Positives = 40/183 (21%), Gaps = 32/183 (17%)

Query: 54  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 113
           +  V+   T  +G   A      G  VV+  R  +  +     + +              
Sbjct: 24  KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK-------------- 69

Query: 114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 173
                 KV   A +  + A   +                           L        +
Sbjct: 70  ----RFKVNVTAAETADDASRAEA-------VKGAHFVFTAGAI-----GLELLPQAAWQ 113

Query: 174 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 233
              S  +V              D    G  +   G  + G+           +  + +L 
Sbjct: 114 NESSIEIVADYNAQPPLGIGGIDATDKGKEYG--GKRAFGALGIGGLKLKLHRACIAKLF 171

Query: 234 ASL 236
            S 
Sbjct: 172 ESS 174

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.1 bits (118), Expect = 8e-08
 Identities = 25/200 (12%), Positives = 47/200 (23%), Gaps = 20/200 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V + G T  LGK LA      G  +VV SR  E       E      +  +         
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI--------- 53

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                         + A+   ++   +    +ID   +     +  K ++          
Sbjct: 54  --------TGMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGA 104

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
                            V+  +     +  +  A            +    CG       
Sbjct: 105 KGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFAN--LDEKFDWDVPVCGDDDESKK 162

Query: 236 LFKESKRSKVGVHTASPGMV 255
           +         G+     G +
Sbjct: 163 VVMSLISEIDGLRPLDAGPL 182

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 50.5 bits (119), Expect = 9e-08
 Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 27/242 (11%)

Query: 54  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 111
           +  +I G  + + +   +A+     G  +      +ES+   V  + +            
Sbjct: 6   KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL-NESLEKRVRPIAQE----------- 53

Query: 112 SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 171
                          DV +    + L N    + GS+D  +++                 
Sbjct: 54  ------LNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETS 107

Query: 172 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 231
                +   +           +      G  +  +   GS         V G  K  L  
Sbjct: 108 KSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-YNVMGLAKAALES 166

Query: 232 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE------LPETVART 285
               L  +  +  + V+  S G + T      +  +    +N I          E V   
Sbjct: 167 AVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNA 226

Query: 286 LV 287
            +
Sbjct: 227 GM 228

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 49.6 bits (117), Expect = 2e-07
 Identities = 32/232 (13%), Positives = 55/232 (23%), Gaps = 25/232 (10%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++TG T G+G  +AR     G   ++    S        EL   L+             
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA--------- 62

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 175
                                               + +A        +   T E IE+ 
Sbjct: 63  ------RTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERA 116

Query: 176 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 235
               ++G+             +      F +  + +     P    Y      L  L   
Sbjct: 117 SRAKVLGARNLHE------LTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQ 170

Query: 236 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 287
              +           + G      +  G      +   +I   PET  R L 
Sbjct: 171 RRSDGLP----ATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQ 218

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 47.1 bits (110), Expect = 2e-06
 Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 3/177 (1%)

Query: 54  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL-KEGMMAAGG 110
           +   I G     G G A+A+    +G  ++V +          +       +  ++  G 
Sbjct: 9   KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGS 68

Query: 111 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 170
             +   V+   A        P DV+    +A +   ++         + G   +L  +  
Sbjct: 69  LMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLA 128

Query: 171 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 227
              ++    L  S      A+              +     GG+S  LT +      
Sbjct: 129 NGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 40.5 bits (93), Expect = 2e-04
 Identities = 6/46 (13%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 54 RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 97
          + ++++G  +   +   +AR     G ++V+       +   +T+ 
Sbjct: 7  KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR 52

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 39.6 bits (91), Expect = 4e-04
 Identities = 8/38 (21%), Positives = 15/38 (39%)

Query: 54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR 91
          + + + G+T   G +L R     G  V     S + + 
Sbjct: 4  KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI 41

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM 92
          + + I G+T   G     + + +G  V V  R S  +  
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS 42

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 10/48 (20%), Positives = 18/48 (37%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKE 103
           V+I G T  +GK +    +  G    V  R      +   ++    K+
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ 53

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.3 bits (84), Expect = 0.002
 Identities = 13/96 (13%), Positives = 24/96 (25%)

Query: 56  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 115
           V++ G     G A A         V +       +      LE       +    S  K 
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 116 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW 151
           L    +     D+C+   + +       +       
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGE 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	388
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.8
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.69
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.65
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.62
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.62
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.59
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.56
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.55
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.54
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.5
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.48
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.48
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.45
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.45
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.45
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.44
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.43
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.41
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.41
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.4
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.36
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.36
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.27
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.17
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.07
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.98
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.97
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.97
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.76
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.65
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.99
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.83
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.8
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.75
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.73
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.67
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.67
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.63
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.59
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.58
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.57
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.55
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.49
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.47
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.4
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.35
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.18
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.17
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.16
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.14
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.1
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.09
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.09
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.0
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.99
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.94
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.94
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.93
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.91
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.88
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.86
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.85
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.85
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.78
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.77
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.76
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.71
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.7
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.61
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.59
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.59
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.59
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.57
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.56
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.54
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.54
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.54
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.51
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.46
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.46
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.41
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.32
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.28
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.26
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.21
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.2
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.18
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.17
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.08
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.05
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.04
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.02
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.93
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.79
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.47
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.25
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.08
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.97
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.9
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.75
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.69
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.6
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.3
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.28
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.25
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.16
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.02
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.86
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.76
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.76
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.52
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.37
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.27
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.26
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	93.26
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.13
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.13
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.09
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.08
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.03
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.03
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.98
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.79
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.74
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.73
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.73
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.7
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.7
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.5
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.31
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.28
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.18
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.07
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.97
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.94
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.88
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.79
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.72
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.68
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.6
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.6
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.5
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.44
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.42
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.17
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.79
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	90.79
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	90.72
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.72
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.39
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.14
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	90.05
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	90.04
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.99
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.75
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.58
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.32
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.09
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	89.07
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	89.02
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	88.86
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.61
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.41
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	88.39
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.07
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	87.84
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	87.83
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.52
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	87.42
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	87.39
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.28
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.18
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	87.17
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	86.84
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	86.55
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.17
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	86.07
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	85.73
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.63
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	85.28
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.2
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	84.89
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.71
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.42
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	84.17
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	83.96
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	83.87
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	83.57
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.54
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	83.09
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.68
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.65
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	82.57
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	82.52
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	82.35
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	82.25
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	81.69
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.66
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	81.13
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	81.13
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	80.71
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.37

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.4e-51  Score=379.95  Aligned_cols=249  Identities=26%  Similarity=0.374  Sum_probs=221.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+++                +.++.++++|+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~----------------g~~~~~~~~Dv   64 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY----------------GVETMAFRCDV   64 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----------------CCCEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh----------------CCcEEEEEccC
Confidence            47899999999999999999999999999999999999999999988886643                46788999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|+||+||||||+.. .+++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||+++|
T Consensus        65 ~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i~S  142 (251)
T d1vl8a_          65 SNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGS  142 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-cccccccccc
Confidence            9999999999999999999999999999977 7899999999999999999999999999999999988 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      ..+...+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+........ ..       ......+.+++
T Consensus       143 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~-------~~~~~~~~pl~  214 (251)
T d1vl8a_         143 LTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDP-EK-------LDYMLKRIPLG  214 (251)
T ss_dssp             GGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCH-HH-------HHHHHHTCTTS
T ss_pred             chhccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCH-HH-------HHHHHhcCCCC
Confidence            74556678888999999999999999999999999999999999999999864322110 00       01223345688


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |+..|+|++..+.||++++..+.+|+.+.+||+|.
T Consensus       215 R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         215 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            99999999999999999999999999999999985

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=6.4e-51  Score=378.53  Aligned_cols=250  Identities=24%  Similarity=0.321  Sum_probs=222.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+..               .+.++.+++||++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~---------------~~~~~~~~~~Dvt   65 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA---------------PDAEVLTTVADVS   65 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTCCEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC---------------CCCeEEEEeccCC
Confidence            4799999999999999999999999999999999999999999988887643               2357899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|+||+||||||+..+.+++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||++||.
T Consensus        66 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~  144 (258)
T d1iy8a_          66 DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASV  144 (258)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccH
Confidence            99999999999999999999999999987656789999999999999999999999999999999987 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH-----
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR-----  284 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~-----  284 (388)
                       ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+||+......       ......+++..+     
T Consensus       145 -~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~-------~~~~~~~~~~~~~~~~~  216 (258)
T d1iy8a_         145 -GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK-------QLDPENPRKAAEEFIQV  216 (258)
T ss_dssp             -GGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHH-------HHCTTCHHHHHHHHHTT
T ss_pred             -hhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHh-------hcCcccHHHHHHHHHhc
Confidence             6788999999999999999999999999999999999999999999998643211       111112333322     


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+++|+..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       217 ~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         217 NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            356788999999999999999999999999999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.8e-51  Score=378.77  Aligned_cols=248  Identities=21%  Similarity=0.335  Sum_probs=221.7

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +.|+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.+++|
T Consensus         5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~-----------------~g~~~~~~~~   67 (255)
T d1fmca_           5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQAFACRC   67 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------cCCcEEEEEc
Confidence            45789999999999999999999999999999999999999999999998876                 3467899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++ +.+.++|++++++|+.++++++|+++|+|+++ ++|+||++
T Consensus        68 Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Ii~i  144 (255)
T d1fmca_          68 DITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTI  144 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-cccccccc
Confidence            999999999999999999999999999999876 4555 78999999999999999999999999999998 57899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++..+|++||+|+.+|+++||.|++++|||||+|+||+|+||+.........         ......+.+
T Consensus       145 sS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~---------~~~~~~~~p  214 (255)
T d1fmca_         145 TSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI---------EQKMLQHTP  214 (255)
T ss_dssp             CCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHH---------HHHHHHTCS
T ss_pred             ccc-chhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHH---------HHHHHhcCC
Confidence            998 7788999999999999999999999999999999999999999999998754332110         012233456


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ++|+..|+|++..+.||+++...+++|+.+..||+|..
T Consensus       215 l~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         215 IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCccc
Confidence            78899999999999999999999999999999999853

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.5e-50  Score=376.36  Aligned_cols=254  Identities=23%  Similarity=0.330  Sum_probs=224.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+.++.++++|
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~D   65 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-----------------KGFKVEASVCD   65 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCCceEEEee
Confidence            4689999999999999999999999999999999999999999999888876                 35678899999


Q ss_pred             CCCHHHHHHHHHHHHhhcC-CccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          128 VCEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g-~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      ++|+++++++++++.++++ ++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||++
T Consensus        66 v~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i  143 (259)
T d2ae2a_          66 LSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFI  143 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-cccccccc
Confidence            9999999999999999987 7999999999987 6889999999999999999999999999999999988 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++...|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+...........  ..   ..+...+.+
T Consensus       144 sS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--~~---~~~~~~~~p  217 (259)
T d2ae2a_         144 SSV-SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQK--EN---LNKLIDRCA  217 (259)
T ss_dssp             CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHH--HH---HHHHHHTST
T ss_pred             ccc-ccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhH--HH---HHHHHhcCC
Confidence            998 678889999999999999999999999999999999999999999999865322111100  00   012234467


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ  326 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~  326 (388)
                      ++|+..|+|++..+.||+++...+++|+.+.+||+|....
T Consensus       218 l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a~~  257 (259)
T d2ae2a_         218 LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMANC  257 (259)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEeeC
Confidence            8899999999999999999999999999999999996543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.3e-51  Score=377.15  Aligned_cols=247  Identities=22%  Similarity=0.308  Sum_probs=219.0

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~-----------------~g~~~~~~~~   66 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-----------------FGYESSGYAG   66 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-----------------TTCCEEEEEC
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEc
Confidence            34789999999999999999999999999999999999999999999888865                 3467899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||++
T Consensus        67 Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVni  144 (251)
T d2c07a1          67 DVSKKEEISEVINKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINI  144 (251)
T ss_dssp             CTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHhcCCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEE
Confidence            999999999999999999999999999999987 6889999999999999999999999999999999988 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++.........          .+...+.+
T Consensus       145 sS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~----------~~~~~~~p  213 (251)
T d2c07a1         145 SSI-VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIK----------KNIISNIP  213 (251)
T ss_dssp             CCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHH----------HHHHTTCT
T ss_pred             CCH-HhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHH----------HHHHhcCC
Confidence            998 6778889999999999999999999999999999999999999999998754332111          12223356


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ++|+..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       214 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         214 AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence            7888999999999999999999999999999999974

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.5e-50  Score=376.57  Aligned_cols=256  Identities=21%  Similarity=0.234  Sum_probs=215.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .++||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.                .+.++.++++|+
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~----------------~g~~~~~~~~Dv   64 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ----------------HGVKVLYDGADL   64 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH----------------HTSCEEEECCCT
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh----------------cCCcEEEEECCC
Confidence            3689999999999999999999999999999999997 56677777777664                246789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. .+++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||
T Consensus        65 ~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS  142 (260)
T d1x1ta1          65 SKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIAS  142 (260)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeeccc
Confidence            9999999999999999999999999999987 6899999999999999999999999999999999988 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhh--hccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI--ICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~pe~vA~~~  286 (388)
                      . ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+...............  ...........+
T Consensus       143 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  221 (260)
T d1x1ta1         143 A-HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQP  221 (260)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCT
T ss_pred             c-cceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCC
Confidence            8 7888999999999999999999999999999999999999999999999765432211110000  000011234457


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ++|+..|+|++..+.||+++...+.+|+.+..||+|..
T Consensus       222 l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchhc
Confidence            78999999999999999999999999999999999853

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.6e-50  Score=374.62  Aligned_cols=249  Identities=22%  Similarity=0.310  Sum_probs=197.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +.++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+.++.++.|
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~   64 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-----------------KGFQVTGSVC   64 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCceEEEec
Confidence            34689999999999999999999999999999999999999999999888866                 3457999999


Q ss_pred             cCCCHHHHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          127 DVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      |++++++++++++++.+++ |++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||+
T Consensus        65 Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~  142 (259)
T d1xq1a_          65 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIF  142 (259)
T ss_dssp             CTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-ccccccc
Confidence            9999999999999999998 78999999999987 6889999999999999999999999999999999987 5799999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      +||. ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.........         ......+.
T Consensus       143 isS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~---------~~~~~~~~  212 (259)
T d1xq1a_         143 MSSI-AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---------KKVVISRK  212 (259)
T ss_dssp             EC-----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------
T ss_pred             cccc-cccccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH---------HHHHHhCC
Confidence            9998 6788889999999999999999999999999999999999999999998754322110         12234457


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +++|+..|+|++..+.||+++...+++|+.+.+||+|.-
T Consensus       213 pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~  251 (259)
T d1xq1a_         213 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV  251 (259)
T ss_dssp             -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEEC
Confidence            889999999999999999999999999999999999854

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.7e-51  Score=375.16  Aligned_cols=241  Identities=24%  Similarity=0.377  Sum_probs=216.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.                    .+...+++|++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~--------------------~~~~~~~~Dv~   60 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--------------------ANGKGLMLNVT   60 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------------------GGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--------------------CCCcEEEEEec
Confidence            5799999999999999999999999999999999999999988776652                    45778999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||.
T Consensus        61 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~  138 (243)
T d1q7ba_          61 DPASIESVLEKIRAEFGEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSV  138 (243)
T ss_dssp             CHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHhhhhhhhhhcccCCcceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecch
Confidence            999999999999999999999999999987 6899999999999999999999999999999999987 57999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++.++|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.........          .+...+.+++|
T Consensus       139 -~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~----------~~~~~~~pl~R  207 (243)
T d1q7ba_         139 -VGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQR----------AGILAQVPAGR  207 (243)
T ss_dssp             -HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHH----------HHHHTTCTTSS
T ss_pred             -hhcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHH----------HHHHhcCCCCC
Confidence             6778889999999999999999999999999999999999999999998755432211          12223356788


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|+|++..+.||++++..+.+|+.+..||+|.
T Consensus       208 ~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         208 LGGAQEIANAVAFLASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence            8899999999999999999999999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.6e-50  Score=374.12  Aligned_cols=251  Identities=24%  Similarity=0.356  Sum_probs=218.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.+++||+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--------------------~~~~~~~~~Dv   60 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--------------------GPAACAIALDV   60 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCceEEEEeeC
Confidence            5789999999999999999999999999999999999999988877665                    24688899999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|+||+||||||+.. .+++.+.+.++|++++++|+.|+++++|+++|.|.++++.|+||++||
T Consensus        61 t~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS  139 (256)
T d1k2wa_          61 TDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMAS  139 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccc
Confidence            9999999999999999999999999999987 689999999999999999999999999999998877656899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhh--ccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII--CELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~pe~vA~~~  286 (388)
                      . ++..+.++.++|++||+|+.+|+++|+.|++++|||||+|+||+|+||+........... ....  ....+.....+
T Consensus       140 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P  217 (256)
T d1k2wa_         140 Q-AGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADY-ENLPRGEKKRQVGAAVP  217 (256)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHH-HTCCTTHHHHHHHHHST
T ss_pred             h-hhccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhh-ccCChHHHHHHHHhcCC
Confidence            8 788899999999999999999999999999999999999999999999875432211110 0000  00112234457


Q ss_pred             hhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          287 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ++|+..|+|++..+.||++++..+++|+.+.+||+.
T Consensus       218 lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~  253 (256)
T d1k2wa_         218 FGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGN  253 (256)
T ss_dssp             TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCccCceEEECcch
Confidence            889999999999999999999999999999998884

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=3.6e-50  Score=374.02  Aligned_cols=253  Identities=19%  Similarity=0.291  Sum_probs=221.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++..++||++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~Dv~   64 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-----------------KGVEARSYVCDVT   64 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTSCEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            57999999999999999999999999999999999999999998888765                 3467899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||...+.+++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~  143 (260)
T d1zema1          65 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASM  143 (260)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeech
Confidence            99999999999999999999999999987656889999999999999999999999999999999987 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh-hhhhhccCHHHHHHH---
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-MFNIICELPETVART---  285 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~pe~vA~~---  285 (388)
                       ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+|++........... ........|++.++.   
T Consensus       144 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T d1zema1         144 -AGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG  222 (260)
T ss_dssp             -HHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred             -hhccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh
Confidence             678889999999999999999999999999999999999999999999875432211111 111222346655554   


Q ss_pred             --HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCc
Q 016493          286 --LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  321 (388)
Q Consensus       286 --~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  321 (388)
                        +++|+..|+|++..+.||+++...+++|+.+.+||+
T Consensus       223 ~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         223 SVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             TSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence              467888999999999999999998888888887775

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1.8e-50  Score=375.06  Aligned_cols=251  Identities=22%  Similarity=0.330  Sum_probs=220.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.+++||++|+++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~-----------------~g~~~~~~~~Dv~~~~~   64 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-----------------AGGHAVAVKVDVSDRDQ   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTSHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeCCCHHH
Confidence            7899999999999999999999999999999999999999988876                 34678999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++++++.++||+||+||||||+.. .+++.+.+.++|++++++|+.|+++++|+++|+|.++++.++|+++||. ++.
T Consensus        65 v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~  142 (255)
T d1gega_          65 VFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ-AGH  142 (255)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GGT
T ss_pred             HHHHHHHHHHHhCCccEEEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccch-hhc
Confidence            99999999999999999999999987 6899999999999999999999999999999998887677899999998 678


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhc-cCHHHHHHHHhhhhhh
Q 016493          214 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC-ELPETVARTLVPRIRV  292 (388)
Q Consensus       214 ~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~pe~vA~~~l~~~~~  292 (388)
                      .+.|+.+.|++||+|+.+|+++|+.|++++|||||+|+||+|+||+................. ...+...+.+++|+..
T Consensus       143 ~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~  222 (255)
T d1gega_         143 VGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSE  222 (255)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBC
T ss_pred             ccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcC
Confidence            899999999999999999999999999999999999999999999875432211111100000 0122234457889999


Q ss_pred             ccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          293 VKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |+|++..+.||++++..+.+|+.+.+||+|.
T Consensus       223 peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         223 PEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence            9999999999999999999999999999884

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.4e-50  Score=371.34  Aligned_cols=237  Identities=23%  Similarity=0.323  Sum_probs=215.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++++|++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~   62 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--------------------ADAARYVHLDVT   62 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------------------GGGEEEEECCTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------hCcceEEEeecC
Confidence            579999999999999999999999999999999999999888776664                    245788999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~g~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~  140 (244)
T d1nffa_          63 QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSI  140 (244)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEecccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999988 57999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+......               +..+.+++|
T Consensus       141 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~---------------~~~~~pl~R  204 (244)
T d1nffa_         141 -EGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE---------------DIFQTALGR  204 (244)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT---------------TCSCCSSSS
T ss_pred             -ccccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH---------------HHHhccccC
Confidence             6788999999999999999999999999999999999999999999998654321               122345778


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +..|+|++..+.||++++..+.+|+.+.+||++..
T Consensus       205 ~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         205 AAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCCEEEECCCeec
Confidence            88888899999999999999999999999999864

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.9e-50  Score=373.75  Aligned_cols=248  Identities=24%  Similarity=0.329  Sum_probs=218.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++++                 .+.++.++++|+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-----------------~g~~~~~~~~Dv   66 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-----------------VGGEAIAVKGDV   66 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh-----------------cCCcEEEEEccC
Confidence            689999999999999999999999999999999999864 57777777765                 356789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|++++.+++|+++||
T Consensus        67 t~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS  145 (261)
T d1geea_          67 TVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS  145 (261)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccccccccccc
Confidence            9999999999999999999999999999987 688999999999999999999999999999999998866778999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.|+..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+........  ..      ..+...+.+++
T Consensus       146 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~--~~------~~~~~~~~pl~  216 (261)
T d1geea_         146 V-HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADP--EQ------RADVESMIPMG  216 (261)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSH--HH------HHHHHTTCTTS
T ss_pred             c-hhcccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCH--HH------HHHHHhcCCCC
Confidence            8 678899999999999999999999999999999999999999999999864321110  00      01122334678


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      |+..|+|++..+.||+++...+++|+.+..||+|.-
T Consensus       217 R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence            899999999999999999999999999999999843

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3e-50  Score=372.58  Aligned_cols=245  Identities=22%  Similarity=0.316  Sum_probs=217.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++..                  +.++.++++|++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dv~   64 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------------------PDQIQFFQHDSS   64 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------------------CCcEEEEEccCC
Confidence            47999999999999999999999999999999999999999888776632                  357889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|+||+||||||... .+++.+.+.++|++++++|+.++++++|+++|+|++++.+++||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~  143 (251)
T d1zk4a1          65 DEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI  143 (251)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999998666799999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~e--l~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                       ++..+.|+...|++||+|+.+|++++|.|  ++++|||||+|+||+|+||+..........  ..       ...+.++
T Consensus       144 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~--~~-------~~~~~pl  213 (251)
T d1zk4a1         144 -EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEA--MS-------QRTKTPM  213 (251)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHH--HT-------STTTCTT
T ss_pred             -ceeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHH--HH-------HHhCCCC
Confidence             67888999999999999999999999998  678999999999999999987654321111  11       1123467


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +|+..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       214 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence            888999999999999999999999999999999985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=7.4e-50  Score=369.07  Aligned_cols=244  Identities=20%  Similarity=0.303  Sum_probs=204.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++.  ..+.+++                 .+.++.+++||++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~-----------------~g~~~~~~~~Dvs   62 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRN-----------------LGRRVLTVKCDVS   62 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHH-----------------cCCcEEEEEeeCC
Confidence            57999999999999999999999999999999999987542  2223322                 3567899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~G~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~  140 (247)
T d2ew8a1          63 QPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTST  140 (247)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccc
Confidence            999999999999999999999999999987 7899999999999999999999999999999999988 57999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+..............        -...+++|
T Consensus       141 -~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~--------~~~~~l~r  211 (247)
T d2ew8a1         141 -TYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP--------NMLQAIPR  211 (247)
T ss_dssp             -GGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------------CTTSSSCS
T ss_pred             -hhcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH--------HHhccCCC
Confidence             678889999999999999999999999999999999999999999999875433211111000        00124678


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|+|++..+.||+++...+++|+.+.+||+|.
T Consensus       212 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         212 LQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCeEEECCCEe
Confidence            8899999999999999999999999999999884

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=5.4e-50  Score=372.26  Aligned_cols=247  Identities=26%  Similarity=0.363  Sum_probs=217.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++|++|+
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~-----------------~g~~~~~~~~Dvs~~   63 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-----------------AGVEADGRTCDVRSV   63 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeecCCH
Confidence            489999999999999999999999999999999999999999998876                 346799999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHH--HHcCCCCcEEEEecCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGA  209 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~--m~~~~~~g~Iv~isS~  209 (388)
                      ++++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+  |+++ +.|+||+++|.
T Consensus        64 ~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-~~g~Ii~i~S~  141 (257)
T d2rhca1          64 PEIEALVAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIAST  141 (257)
T ss_dssp             HHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-TEEEEEEECCG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-CCccccccccc
Confidence            9999999999999999999999999987 689999999999999999999999999999997  4555 56899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH-----H
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----R  284 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA-----~  284 (388)
                       ++..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+........    .......+++..     +
T Consensus       142 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~e~~~~~~~~  216 (257)
T d2rhca1         142 -GGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHY----SDIWEVSTEEAFDRITAR  216 (257)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHH----HHHTTCCHHHHHHHHHTT
T ss_pred             -ccccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhh----hhhcccChHHHHHHHHhc
Confidence             678899999999999999999999999999999999999999999999875432111    111122333333     3


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      .+++|+..|+|++..+.||+|++..+++|+.+.+||++
T Consensus       217 ~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         217 VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             STTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCc
Confidence            45678899999999999999999999999999999886

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-49  Score=366.44  Aligned_cols=239  Identities=22%  Similarity=0.256  Sum_probs=212.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                      +.++++||+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~----------------------~~~~~~~Dv   58 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------GAHPVVMDV   58 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------------TCEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----------------------CCeEEEEec
Confidence            5789999999999999999999999999999999999998887665432                      356789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|.|+++ +.++|+++||
T Consensus        59 ~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss  136 (242)
T d1ulsa_          59 ADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTAS  136 (242)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeecc
Confidence            9999999999999999999999999999987 6899999999999999999999999999999999987 5778888776


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      .  +..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.........          .+.....+++
T Consensus       137 ~--~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~----------~~~~~~~pl~  204 (242)
T d1ulsa_         137 R--VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR----------EKAIAATPLG  204 (242)
T ss_dssp             G--GGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHH----------HHHHHTCTTC
T ss_pred             c--cccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHH----------HHHHhcCCCC
Confidence            4  567888899999999999999999999999999999999999999998765332111          2233445688


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |+..|+|++..+.||++++..+.+|+.+..||+|.
T Consensus       205 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         205 RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            89999999999999999999999999999999984

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=7.1e-50  Score=370.30  Aligned_cols=242  Identities=28%  Similarity=0.359  Sum_probs=215.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++++|++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~   61 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------------------GDAARYQHLDVT   61 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------------------GGGEEEEECCTT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCceEEEEcccC
Confidence            589999999999999999999999999999999999998887765543                    356889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||.
T Consensus        62 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~  139 (254)
T d1hdca_          62 IEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSA  139 (254)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999988 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+..+........          ...+.+++|
T Consensus       140 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~----------~~~~~pl~R  208 (254)
T d1hdca_         140 -AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG----------NYPNTPMGR  208 (254)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT----------SCTTSTTSS
T ss_pred             -hhcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH----------HHhCCCCCC
Confidence             678899999999999999999999999999999999999999999999875433221111          112345677


Q ss_pred             hh-hccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          290 IR-VVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       290 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      +. .|+|++..+.||++++..+++|+.+..||+|..
T Consensus       209 ~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCccC
Confidence            76 588888889999999999999999999999854

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-50  Score=370.48  Aligned_cols=245  Identities=24%  Similarity=0.334  Sum_probs=211.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                     .++.+++||++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~---------------------~~~~~~~~Dvs   61 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------------------PGAVFILCDVT   61 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------------------TTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEccCC
Confidence            689999999999999999999999999999999999998887765543                     34678999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|+||+||||||+.....++.+.+.++|++++++|+.++++++|+++|+|+++  +|+||++||.
T Consensus        62 ~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~  139 (250)
T d1ydea1          62 QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSL  139 (250)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccc
Confidence            99999999999999999999999999987645678899999999999999999999999999999875  4899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.+............    ..+.....+++|
T Consensus       140 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~----~~~~~~~~pl~R  214 (250)
T d1ydea1         140 -VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRAS----IREGMLAQPLGR  214 (250)
T ss_dssp             -HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHH----HHHHHHTSTTSS
T ss_pred             -cccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHH----HHHHHhcCCCCC
Confidence             677888999999999999999999999999999999999999999999875422111100000    112233456788


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|+|++..+.||+++ ..+++|+.+.+||++.
T Consensus       215 ~g~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~~  247 (250)
T d1ydea1         215 MGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAE  247 (250)
T ss_dssp             CBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred             CCCHHHHHHHHHHHhCc-cCCCcCCeEEECCCcc
Confidence            99999999999999986 6788999999999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-49  Score=365.41  Aligned_cols=244  Identities=20%  Similarity=0.272  Sum_probs=209.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .++||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++                      ...+++||++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~----------------------~~~~~~~Dv~   58 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI----------------------GGAFFQVDLE   58 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH----------------------TCEEEECCTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc----------------------CCeEEEEeCC
Confidence            479999999999999999999999999999999999987543 22221                      2356899999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|+||+||||||+.. .+++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||.
T Consensus        59 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~  136 (248)
T d2d1ya1          59 DERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASV  136 (248)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhcCCCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-ccccccccccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999988 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                       ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+||+..+........    ...........+++|
T Consensus       137 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~pl~R  211 (248)
T d2d1ya1         137 -QGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDP----ERTRRDWEDLHALRR  211 (248)
T ss_dssp             -GGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC------------CHHHHTTSTTSS
T ss_pred             -cccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCH----HHHHHHHHhcCCCCC
Confidence             778899999999999999999999999999999999999999999999864321100000    000111222346788


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|+|+++.+.||++++..+.+|+.+..||+|.
T Consensus       212 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         212 LGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            8999999999999999999999999999999984

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.7e-49  Score=361.95  Aligned_cols=240  Identities=21%  Similarity=0.284  Sum_probs=209.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                     ..+..+.+|+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---------------------~~~~~~~~Dv   59 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---------------------PGIEPVCVDL   59 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEEeC
Confidence            6799999999999999999999999999999999999998887766543                     2467789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|++++++++    +++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|.|.+++.+|+||+++|
T Consensus        60 ~~~~~v~~~~----~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS  134 (242)
T d1cyda_          60 GDWDATEKAL----GGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS  134 (242)
T ss_dssp             TCHHHHHHHH----TTCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHH----HHcCCCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccch
Confidence            9999887655    56799999999999977 689999999999999999999999999999998776656899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.|+...|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+........  ..      ......+.+++
T Consensus       135 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~--~~------~~~~~~~~pl~  205 (242)
T d1cyda_         135 M-VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADP--EF------ARKLKERHPLR  205 (242)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCH--HH------HHHHHHHSTTS
T ss_pred             h-hccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCH--HH------HHHHHhcCCCC
Confidence            8 778889999999999999999999999999999999999999999999865422110  00      11223445788


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |+..|+|++..+.||++++..+++|+.+..||+|.
T Consensus       206 R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         206 KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCchhcCcCCceEEeCcchh
Confidence            99999999999999999999999999999999985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.5e-48  Score=363.87  Aligned_cols=257  Identities=20%  Similarity=0.256  Sum_probs=206.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+...              .+.++.++++|++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~--------------~~~~~~~~~~Dvt   67 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--------------SEQNVNSVVADVT   67 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--------------CcCceEEEEccCC
Confidence            58999999999999999999999999999999999999999999999876421              2356999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |+++++++++++.+++|++|+||||||+..+   ..++.+.+.|+|++++++|+.++++++|+++|+|+++  .|++|++
T Consensus        68 ~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~  145 (264)
T d1spxa_          68 TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNI  145 (264)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceee
Confidence            9999999999999999999999999998642   2345677999999999999999999999999999876  4677777


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      +|+.++..+.|+...|++||+|+.+|+++|+.|++++|||||+|+||+|+|++........... ..............+
T Consensus       146 ~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~P  224 (264)
T d1spxa_         146 SSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS-KKFYSTMATMKECVP  224 (264)
T ss_dssp             CCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHHHCT
T ss_pred             eeeccccccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHH-HHHHHHHHHHHhcCC
Confidence            7765677889999999999999999999999999999999999999999999875432211110 000000112233457


Q ss_pred             hhhhhhccccccceeeccCHH-HHHHHHHhHhhcCccc
Q 016493          287 VPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWF  323 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~  323 (388)
                      ++|+..|+|++..+.||+|++ ..+++|+.+.+||+|.
T Consensus       225 l~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         225 AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            889999999999999999965 7789999999999874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.4e-49  Score=362.54  Aligned_cols=239  Identities=23%  Similarity=0.399  Sum_probs=212.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ++||||||++|||+++|++|+++|++|++. .|+++.++++.+++++                 .+.++.++++|++|++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~Dv~~~~   64 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-----------------YGGQAITFGGDVSKEA   64 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------HTCEEEEEECCTTSHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCcEEEEeCCCCCHH
Confidence            689999999999999999999999999987 5677788888887765                 3467899999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      +++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+|||+||. ++
T Consensus        65 ~v~~~~~~~~~~~g~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~-~~  141 (244)
T d1edoa_          65 DVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASV-VG  141 (244)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-HH
T ss_pred             HHHHHHHHHHHHcCCCCcccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcCh-hh
Confidence            999999999999999999999999987 6899999999999999999999999999999999987 58999999998 67


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhh
Q 016493          213 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  292 (388)
Q Consensus       213 ~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~  292 (388)
                      ..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.........          .+...+.+++|+..
T Consensus       142 ~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~----------~~~~~~~pl~R~~~  211 (244)
T d1edoa_         142 LIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDME----------KKILGTIPLGRTGQ  211 (244)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHH----------HHHHTSCTTCSCBC
T ss_pred             cCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHH----------HHHHhcCCCCCCcC
Confidence            88889999999999999999999999999999999999999999998755332111          11223356788899


Q ss_pred             ccccccceeecc-CHHHHHHHHHhHhhcCcc
Q 016493          293 VKGSGKAINYLT-PPRILLALVTAWLRRGRW  322 (388)
Q Consensus       293 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~g~~  322 (388)
                      |+|++..+.||+ +++..+.+|+.+..||++
T Consensus       212 p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         212 PENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            999999999996 999999999999998886

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=2.7e-48  Score=361.32  Aligned_cols=249  Identities=20%  Similarity=0.247  Sum_probs=218.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.++.                +.++.+++||
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~----------------g~~~~~~~~D   67 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF----------------GVKTKAYQCD   67 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH----------------TCCEEEEECC
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh----------------CCceEEEEcc
Confidence            368999999999999999999999999999999999999999999888886643                4678999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|.+++..++|++++
T Consensus        68 v~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~  146 (260)
T d1h5qa_          68 VSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTS  146 (260)
T ss_dssp             TTCHHHHHHHHHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEee
Confidence            99999999999999999999999999999987 68999999999999999999999999999999997666788888887


Q ss_pred             CCCCCC------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH
Q 016493          208 GAGSGG------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  281 (388)
Q Consensus       208 S~~~~~------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  281 (388)
                      |.....      .+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.........          ...
T Consensus       147 s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~----------~~~  216 (260)
T d1h5qa_         147 SMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIR----------DHQ  216 (260)
T ss_dssp             CGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHH----------HHH
T ss_pred             ccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHH----------HHH
Confidence            752211      2335678999999999999999999999999999999999999998754322111          122


Q ss_pred             HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          282 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       282 vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..+.+++|+..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       217 ~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         217 ASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             HHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence            344678899999999999999999999999999999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.6e-48  Score=362.03  Aligned_cols=248  Identities=23%  Similarity=0.337  Sum_probs=212.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||+||||||++|||+++|++|+++|++|++++|++++++++.+++..                  ...+.+++||++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~------------------~~~~~~~~~Dv~   64 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS------------------PDVISFVHCDVT   64 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------------------CCceEEEEccCC
Confidence            58999999999999999999999999999999999999999988877642                  245778999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCC-CCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      |+++++++++++.+++|++|+||||||+.... ..+.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||
T Consensus        65 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss  143 (268)
T d2bgka1          65 KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTAS  143 (268)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCcccccc
Confidence            99999999999999999999999999986522 357889999999999999999999999999999988 5799999998


Q ss_pred             CCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH---
Q 016493          209 AGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR---  284 (388)
Q Consensus       209 ~~~~~~~~~-~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~---  284 (388)
                      . ++..+.+ ....|++||+|+.+|+++|+.|++++|||||+|+||+|+||+..+........        .++...   
T Consensus       144 ~-~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--------~~~~~~~~~  214 (268)
T d2bgka1         144 I-SSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR--------VEELAHQAA  214 (268)
T ss_dssp             G-GGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHH--------HHHHHHHTC
T ss_pred             c-cccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHH--------HHHHHHhcc
Confidence            8 4455444 45689999999999999999999999999999999999999976543221111        111111   


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      .+++|+..|+|++..+.||++++..+++|+.+.+||+|...
T Consensus       215 ~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         215 NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccC
Confidence            24567888999999999999999999999999999999543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=6.7e-48  Score=358.09  Aligned_cols=254  Identities=22%  Similarity=0.333  Sum_probs=218.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++++||+||||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.+++++.||+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~D~   64 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-----------------KGLNVEGSVCDL   64 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCCceEEEeec
Confidence            578999999999999999999999999999999999999999998888866                 356788999999


Q ss_pred             CCHHHHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++++++++++++.+++ +++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|+++ +.|+||++|
T Consensus        65 s~~~~~~~~~~~~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~is  142 (258)
T d1ae1a_          65 LSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLS  142 (258)
T ss_dssp             TCHHHHHHHHHHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccc-ccccccccc
Confidence            99999999999999998 67999999999987 6899999999999999999999999999999999988 689999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.+....|+++|+|+++|++.|++|++++|||||+|+||+|+||+........... ...   ..+...+.++
T Consensus       143 S~-~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~-~~~---~~~~~~~~pl  217 (258)
T d1ae1a_         143 SI-AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQ-KEE---IDNFIVKTPM  217 (258)
T ss_dssp             CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------C-HHH---HHHHHHHSTT
T ss_pred             cc-ccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhh-HHH---HHHHHhcCCC
Confidence            98 678899999999999999999999999999999999999999999999875533211110 000   1122344577


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcccccc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ  326 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~  326 (388)
                      +|+..|+|++..+.||++++..+.+|..+.+||+|....
T Consensus       218 gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         218 GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTANG  256 (258)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeeccC
Confidence            899999999999999999999999999999999997544

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=358.88  Aligned_cols=240  Identities=22%  Similarity=0.304  Sum_probs=209.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                     ..+..+.+|+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~---------------------~~~~~~~~Dv   61 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------------------PGIEPVCVDL   61 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEEeC
Confidence            5789999999999999999999999999999999999999888776553                     2367789999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|++++++++    +++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|.|.++++.|+||++||
T Consensus        62 ~d~~~v~~~~----~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS  136 (244)
T d1pr9a_          62 GDWEATERAL----GSVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS  136 (244)
T ss_dssp             TCHHHHHHHH----TTCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHH----HHhCCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccc
Confidence            9999987655    56799999999999987 689999999999999999999999999999998765546899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.|+...|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.+........        ......+.+++
T Consensus       137 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~--------~~~~~~~~pl~  207 (244)
T d1pr9a_         137 Q-CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK--------AKTMLNRIPLG  207 (244)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHH--------HHHHHTTCTTC
T ss_pred             c-cccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHH--------HHHHHhcCCCC
Confidence            8 67888999999999999999999999999999999999999999999987543321111        01122345678


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |+..|+|++..+.||+++...+.+|+.+..||+|.
T Consensus       208 R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         208 KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCchhCCcCCcEEEECccHh
Confidence            88999999999999999999999999999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-48  Score=365.07  Aligned_cols=252  Identities=23%  Similarity=0.377  Sum_probs=221.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+....            ..+.++.+++||++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~------------~~~~~~~~~~~Dvs   76 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP------------TKQARVIPIQCNIR   76 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT------------TCCCCEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhcc------------ccCceEEEEeccCC
Confidence            589999999999999999999999999999999999999999999998764332            13568999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|.|+++ +.++||++||.
T Consensus        77 ~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~Ii~~ss~  154 (297)
T d1yxma1          77 NEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVP  154 (297)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-ccccccccccc
Confidence            999999999999999999999999999987 7899999999999999999999999999999999988 57889998664


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                        +..+.|+...|++||+|+.+|+++||.|++++|||||+|+||+|+|++.........+....      ....+.+++|
T Consensus       155 --~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~------~~~~~~plgR  226 (297)
T d1yxma1         155 --TKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE------GSFQKIPAKR  226 (297)
T ss_dssp             --CTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT------TGGGGSTTSS
T ss_pred             --ccccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHH------HHHhcCCCCC
Confidence              55678889999999999999999999999999999999999999999876543322222111      1223456889


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|+|+++.+.||+++...+++|+.+.+||++.
T Consensus       227 ~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         227 IGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             CBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence            9999999999999999999999999999999874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.7e-48  Score=357.58  Aligned_cols=234  Identities=21%  Similarity=0.316  Sum_probs=199.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+++                            .++..+++|
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------------------~~~~~~~~D   53 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------------KGLFGVEVD   53 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------TTSEEEECC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------------------cCceEEEEe
Confidence            3578999999999999999999999999999999999986532                            346779999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++|
T Consensus        54 v~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~is  131 (237)
T d1uzma1          54 VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIG  131 (237)
T ss_dssp             TTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHhcCCceEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEc
Confidence            99999999999999999999999999999987 6899999999999999999999999999999999998 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.........          .......++
T Consensus       132 S~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~----------~~~~~~~pl  200 (237)
T d1uzma1         132 SV-SGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQ----------QGALQFIPA  200 (237)
T ss_dssp             CC-CC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHH----------HHHGGGCTT
T ss_pred             ch-hhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHH----------HHHHhcCCC
Confidence            98 6788889999999999999999999999999999999999999999998754322111          111223467


Q ss_pred             hhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          288 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       288 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +|+..|+|++..+.||++++..+.+|+.+..||++
T Consensus       201 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         201 KRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            88899999999999999999999999999888886

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.5e-48  Score=362.09  Aligned_cols=258  Identities=21%  Similarity=0.241  Sum_probs=213.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++...              .+.++.+++||++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~--------------~~~~~~~~~~Dvs   67 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--------------SEKQVNSVVADVT   67 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--------------CCCceEEEEccCC
Confidence            58999999999999999999999999999999999999999999988865311              2357999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCc----CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      |+++++++++++.+++|++|+||||||...+ .++    .+.+.++|++++++|+.++++++|+++|+|+++  +|++|+
T Consensus        68 ~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~-~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~  144 (272)
T d1xkqa_          68 TEDGQDQIINSTLKQFGKIDVLVNNAGAAIP-DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVN  144 (272)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCceEEEeCCcccCc-ccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc--CCcccc
Confidence            9999999999999999999999999999763 333    467888999999999999999999999999876  356666


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      ++|+.++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+||+............ .............
T Consensus       145 ~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~-~~~~~~~~~~~~~  223 (272)
T d1xkqa_         145 VSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQ-KFYNFMASHKECI  223 (272)
T ss_dssp             ECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHH-HHHHHHHHCTTTC
T ss_pred             ccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHH-HHHHHHHHHhcCC
Confidence            666546788999999999999999999999999999999999999999999998764332111100 0000000111234


Q ss_pred             HhhhhhhccccccceeeccCHHH-HHHHHHhHhhcCccccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRGRWFDD  325 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~g~~~~~  325 (388)
                      +++|+..|+|+++.+.||++++. .+++|+.+.+||+|.--
T Consensus       224 PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         224 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            67889999999999999999876 47899999999988543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.4e-48  Score=361.57  Aligned_cols=243  Identities=16%  Similarity=0.214  Sum_probs=211.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                    +.+..++++|++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~Dv~   62 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--------------------GERSMFVRHDVS   62 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEEECCCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCCeEEEEeecC
Confidence            579999999999999999999999999999999999999988877665                    245778999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|+|+++  +|+||++||.
T Consensus        63 ~~~~~~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~  139 (253)
T d1hxha_          63 SEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASV  139 (253)
T ss_dssp             CHHHHHHHHHHHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccch
Confidence            999999999999999999999999999987 6889999999999999999999999999999999865  5999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccccccccCccch-hhhh-hhhhccCHHHHHHH
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQ-NKQM-FNIICELPETVART  285 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~--~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~-~~~~~~~pe~vA~~  285 (388)
                       ++..+.++..+|++||+|+.+|+++++.|+++  +|||||+|+||+|+||+........ .+.. ....       ...
T Consensus       140 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-------~~~  211 (253)
T d1hxha_         140 -SSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP-------KLN  211 (253)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT-------TTB
T ss_pred             -hhhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCc-------ccc
Confidence             67889999999999999999999999999987  4599999999999999875422111 1111 0000       112


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +++|+..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       212 ~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         212 RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred             ccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECccHh
Confidence            35677788999999999999999999999999999985

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.1e-47  Score=359.84  Aligned_cols=257  Identities=20%  Similarity=0.228  Sum_probs=216.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+...              ...++.++++|++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~--------------~~~~~~~~~~Dv~   66 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--------------PAEKINAVVADVT   66 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCcceEEEEeeCC
Confidence            57999999999999999999999999999999999999999999998876421              2357899999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      |+++++++++++.++||++|+||||||...+ ..+..+.+.++|++++++|+.++++++|+++|.|+++ ++|+|+++||
T Consensus        67 ~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss  145 (274)
T d1xhla_          67 EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSI  145 (274)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhh
Confidence            9999999999999999999999999998542 2345667899999999999999999999999999987 5788888877


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhh--hhhhhhccCHHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK--QMFNIICELPETVARTL  286 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~pe~vA~~~  286 (388)
                      . ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+..........  ......   .......+
T Consensus       146 ~-~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~---~~~~~~iP  221 (274)
T d1xhla_         146 V-AGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFI---GSRKECIP  221 (274)
T ss_dssp             G-GSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH---HHCTTTCT
T ss_pred             h-hccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHH---HHHHcCCC
Confidence            6 67788899999999999999999999999999999999999999999987543221110  000000   00011246


Q ss_pred             hhhhhhccccccceeeccCH-HHHHHHHHhHhhcCccccc
Q 016493          287 VPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       287 l~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~~~~  325 (388)
                      ++|+..|+|++..+.||+++ ...+++|+.+..||++.--
T Consensus       222 lgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         222 VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHh
Confidence            88999999999999999996 5788999999999998543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=5.8e-47  Score=355.21  Aligned_cols=252  Identities=21%  Similarity=0.196  Sum_probs=208.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++..+.+|+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~--------------------~~~~~~~~~Dv   60 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH--------------------GDNVLGIVGDV   60 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------------------CCCeeEEeccc
Confidence            5789999999999999999999999999999999999999887765543                    35688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC----cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +++++++++++++.+++|++|++|||||+..+..+    ..+.+.+.|++++++|+.++++++|+++|.|+++  +|+||
T Consensus        61 ~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI  138 (276)
T d1bdba_          61 RSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVI  138 (276)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEE
T ss_pred             ccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCce
Confidence            99999999999999999999999999998653222    2445567899999999999999999999999876  48899


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      +++|. ++..+.++.+.|++||+|+.+|+|+||.|+++. ||||+|+||+|+||+.........................
T Consensus       139 ~i~S~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (276)
T d1bdba_         139 FTISN-AGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV  216 (276)
T ss_dssp             EECCG-GGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT
T ss_pred             eeeec-hhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc
Confidence            99887 677889999999999999999999999999975 9999999999999987543322111110000000111223


Q ss_pred             HHhhhhhhccccccceeeccCH-HHHHHHHHhHhhcCcccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWFD  324 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~~~  324 (388)
                      .+++|+..|+|++..+.||+++ +..+++|+.+.+||+|..
T Consensus       217 ~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         217 LPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             CTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            4678999999999999999984 688999999999999854

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=4.1e-45  Score=335.70  Aligned_cols=214  Identities=27%  Similarity=0.443  Sum_probs=192.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCe-------EEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDR-------VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~-------Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++||||||++|||+++|++|+++|++       |++.+|++++++++.+++++                 .+.++.+++|
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~   64 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-----------------EGALTDTITA   64 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-----------------TTCEEEEEEC
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEe
Confidence            46899999999999999999999998       99999999999999888865                 3568899999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ +.|+||++
T Consensus        65 Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~i  142 (240)
T d2bd0a1          65 DISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFI  142 (240)
T ss_dssp             CTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEE
Confidence            999999999999999999999999999999987 7899999999999999999999999999999999987 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  286 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~  286 (388)
                      ||. ++..+.|+...|++||+|+.+|+++|+.|++++|||||+|+||+|+|||+.........     ...+||++|+.+
T Consensus       143 sS~-~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~~-----~~~~PedvA~~v  216 (240)
T d2bd0a1         143 TSV-AATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQA-----LMMMPEDIAAPV  216 (240)
T ss_dssp             CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGG-----GSBCHHHHHHHH
T ss_pred             ech-hhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhHh-----cCCCHHHHHHHH
Confidence            998 78889999999999999999999999999999999999999999999998654432221     224688888877


Q ss_pred             hhhhhh
Q 016493          287 VPRIRV  292 (388)
Q Consensus       287 l~~~~~  292 (388)
                      +..+..
T Consensus       217 ~~l~s~  222 (240)
T d2bd0a1         217 VQAYLQ  222 (240)
T ss_dssp             HHHHTS
T ss_pred             HHHHcC
Confidence            765543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=338.60  Aligned_cols=218  Identities=24%  Similarity=0.301  Sum_probs=196.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+.+++.+.||+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~Dv   65 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-----------------LGAKVHTFVVDC   65 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeC
Confidence            579999999999999999999999999999999999999999999999876                 356799999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|++|++|||||... ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||
T Consensus        66 s~~~~v~~~~~~i~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS  143 (244)
T d1yb1a_          66 SNREDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVAS  143 (244)
T ss_dssp             TCHHHHHHHHHHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeec
Confidence            9999999999999999999999999999988 6888899999999999999999999999999999998 5899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC---CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR---SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  285 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~---~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~  285 (388)
                      . ++..+.|++++|++||+|+.+|+++|+.|+++   +||+||+|+||+|+|++.+....    .  .....+||++|+.
T Consensus       144 ~-~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~----~--~~~~~~pe~va~~  216 (244)
T d1yb1a_         144 A-AGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST----S--LGPTLEPEEVVNR  216 (244)
T ss_dssp             C-C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH----H--HCCCCCHHHHHHH
T ss_pred             c-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc----c--ccCCCCHHHHHHH
Confidence            8 68889999999999999999999999999875   68999999999999998754321    1  1123479999999


Q ss_pred             Hhhhhhh
Q 016493          286 LVPRIRV  292 (388)
Q Consensus       286 ~l~~~~~  292 (388)
                      ++..+..
T Consensus       217 i~~~~~~  223 (244)
T d1yb1a_         217 LMHGILT  223 (244)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            8876654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.6e-47  Score=352.12  Aligned_cols=238  Identities=16%  Similarity=0.155  Sum_probs=208.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++.+....                       +.++|++|.+++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-----------------------~~~~dv~~~~~~   58 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-----------------------YPQLKPMSEQEP   58 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-----------------------CTTSEECCCCSH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-----------------------EEEeccCCHHHH
Confidence            799999999999999999999999999999999888765432211                       236899999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++++.++||+||+||||||+..+..++.+.+.++|++.+++|+.++++++|+++|+|+++ +.|+||++||. ++..
T Consensus        59 ~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~-~~~~  136 (252)
T d1zmta1          59 AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSA-TPFG  136 (252)
T ss_dssp             HHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCS-TTTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeeccccc-cccc
Confidence            999999999999999999999987656889999999999999999999999999999999988 57999999998 7888


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH----HHHHHhhhh
Q 016493          215 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET----VARTLVPRI  290 (388)
Q Consensus       215 ~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~----vA~~~l~~~  290 (388)
                      +.+...+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++...........      ..++.    ....+++|+
T Consensus       137 ~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~------~~~e~~~~~~~~~pl~R~  210 (252)
T d1zmta1         137 PWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK------TNPEHVAHVKKVTALQRL  210 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHT------TCHHHHHHHHHHSSSSSC
T ss_pred             ccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccccc------CCHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999999999999999999999875543221110      12332    233467889


Q ss_pred             hhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          291 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       291 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..|+|++..+.||++++..+.+|+.+.+||+|.
T Consensus       211 g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         211 GTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             BCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            999999999999999999999999999999984

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.3e-46  Score=348.04  Aligned_cols=250  Identities=22%  Similarity=0.284  Sum_probs=213.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~-R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      +|+||+||||||++|||+++|++|+++|++|++++ |+++.++++.+++++                 .+.++++++||+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~D~   65 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-----------------LGAQGVAIQADI   65 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH-----------------cCCCceEecCCC
Confidence            58999999999999999999999999999999875 556667777777765                 456789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|+++++++++++.+++|+||+||||||... ..++.+.+.++|++.+++|+.++++++|+++|+|+++   +++++++|
T Consensus        66 ~~~~~v~~~~~~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s  141 (259)
T d1ja9a_          66 SKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSS  141 (259)
T ss_dssp             TSHHHHHHHHHHHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---Cccccccc
Confidence            9999999999999999999999999999987 6889999999999999999999999999999999754   67777777


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH-----H
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----A  283 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v-----A  283 (388)
                      ..+...+.+.+..|++||+|+.+|+|+|++|++++|||||+|+||+|+||+..........  .......+++.     .
T Consensus       142 ~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  219 (259)
T d1ja9a_         142 IAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAP--GGYKGMPQEKIDEGLAN  219 (259)
T ss_dssp             GGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTST--TCCTTCCHHHHHHHHHH
T ss_pred             ccccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhh--hhcccCCHHHHHHHHHh
Confidence            6566668899999999999999999999999999999999999999999987543221111  11111123332     3


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      ..+++|+.+|+|++..+.||++++..+++|..+..||+|
T Consensus       220 ~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         220 MNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            346778999999999999999999999999999999987

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-46  Score=344.09  Aligned_cols=242  Identities=25%  Similarity=0.298  Sum_probs=205.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      +.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.+++||++|
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dv~~   65 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF---------------EPQKTLFIQCDVAD   65 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS---------------CGGGEEEEECCTTS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---------------CCCcEEEEEeecCC
Confidence            479999999999999999999999999999999999999998888876532               24678999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEecC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDG  208 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS  208 (388)
                      +++++++++++.+++|++|+||||||+..         .++|++++++|+.++++++++++|+|++++  .+|+||++||
T Consensus        66 ~~~v~~~~~~~~~~~G~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS  136 (254)
T d2gdza1          66 QQQLRDTFRKVVDHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  136 (254)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeecc
Confidence            99999999999999999999999999854         235899999999999999999999998753  3589999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHH--HHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH-HHHH
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQAS--LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VART  285 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~--la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-vA~~  285 (388)
                      . ++..+.++.++|++||+|+.+|+|+  |+.|++++|||||+|+||+|+|||...........  ... ...+. ....
T Consensus       137 ~-~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--~~~-~~~~~~~~~~  212 (254)
T d2gdza1         137 L-AGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMG--QYI-EYKDHIKDMI  212 (254)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHG--GGG-GGHHHHHHHH
T ss_pred             H-hhccCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcccccccc--ccH-HHHHHHHhcC
Confidence            8 7889999999999999999999997  78899999999999999999999876543221111  111 11222 3445


Q ss_pred             HhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          286 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       286 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                      +++|+..|+|+++.+.||++++.  ++|+.+.+||++
T Consensus       213 p~~r~~~pedvA~~v~fL~s~~~--itG~~i~VdGG~  247 (254)
T d2gdza1         213 KYYGILDPPLIANGLITLIEDDA--LNGAIMKITTSK  247 (254)
T ss_dssp             HHHCCBCHHHHHHHHHHHHHCTT--CSSCEEEEETTT
T ss_pred             CCCCCcCHHHHHHHHHHHHcCCC--CCCCEEEECCCC
Confidence            77889999999999999998764  788888888776

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4.1e-46  Score=342.68  Aligned_cols=238  Identities=22%  Similarity=0.278  Sum_probs=204.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..++                    .+.++.++++|++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dls   61 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA--------------------LEAEAIAVVADVS   61 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------------------CCSSEEEEECCTT
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------------------cCCceEEEEecCC
Confidence            47999999999999999999999999999999999999887655443                    2457889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      ++++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++|+++|+|+++   +.|+++||.
T Consensus        62 ~~~~i~~~~~~i~~~~g~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~---~~i~~~ss~  137 (241)
T d2a4ka1          62 DPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGSV  137 (241)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT---CEEEEECCC
T ss_pred             CHHHHHHHHHHHHHHhCCccEecccccccc-ccchhhhhccccccccccccccccccccccccccccc---cceeecccc
Confidence            999999999999999999999999999977 6899999999999999999999999999999998754   567766664


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                        +..+.|+...|+++|+|+++|+++|++|++++|||||+|+||+|+|++.....+...          .+...+.+++|
T Consensus       138 --a~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~----------~~~~~~~p~~r  205 (241)
T d2a4ka1         138 --AGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAW----------EQEVGASPLGR  205 (241)
T ss_dssp             --TTCCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHH----------HHHHHTSTTCS
T ss_pred             --ccccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHH----------HHHHhCCCCCC
Confidence              345557889999999999999999999999999999999999999998754322111          12334566788


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|+|+++.+.||+++...+++|+.+..||+|.
T Consensus       206 ~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         206 AGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            9999999999999999999999999999999874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-45  Score=341.07  Aligned_cols=238  Identities=22%  Similarity=0.341  Sum_probs=202.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||+||||||++|||+++|++|+++|++|++++|++++++++.+++++..               .+.++.+++||++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~---------------~~~~~~~~~~Dls   71 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG---------------YPGTLIPYRCDLS   71 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---------------CSSEEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------------CCceEEEEEccCC
Confidence            4899999999999999999999999999999999999999999999988742               2358999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEEEEecC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDG  208 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~Iv~isS  208 (388)
                      |+++++++++++.+++|+||+||||||... .+++.+.+.++|++.+++|+.++++++++++|.|++++ ++|+||++||
T Consensus        72 ~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS  150 (257)
T d1xg5a_          72 NEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  150 (257)
T ss_dssp             CHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEec
Confidence            999999999999999999999999999987 68999999999999999999999999999999998764 4789999999


Q ss_pred             CCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          209 AGSGG--SSTPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       209 ~~~~~--~~~~~~~~Y~aSK~al~~l~~~la~el--~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      . ++.  .|.+....|++||+|+.+|+++|+.|+  +++|||||+|+||+++|++........          ..+..+.
T Consensus       151 ~-~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~----------~~~~~~~  219 (257)
T d1xg5a_         151 M-SGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD----------PEKAAAT  219 (257)
T ss_dssp             G-GGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC----------HHHHHHH
T ss_pred             h-HhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh----------HHHHHhc
Confidence            7 443  345667789999999999999999998  789999999999999999864322111          1223445


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHH
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVT  314 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~  314 (388)
                      .++.++..|+|++..+.||+++...+.+++
T Consensus       220 ~~~~r~~~pedvA~~v~fL~s~~a~~itG~  249 (257)
T d1xg5a_         220 YEQMKCLKPEDVAEAVIYVLSTPAHIQIGD  249 (257)
T ss_dssp             HC---CBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             CCCCCCcCHHHHHHHHHHHhCChhcCeECC
Confidence            567778888888888889988776555443

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2e-45  Score=341.07  Aligned_cols=245  Identities=16%  Similarity=0.141  Sum_probs=203.4

Q ss_pred             cCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ++++||++|||||+|  |||+++|++|+++|++|++++|+++..++.. ++.+.                 ..+..++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~   65 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEA-----------------LGGALLFRA   65 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHH-----------------TTCCEEEEC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-Hhhhc-----------------cCccccccc
Confidence            589999999999986  9999999999999999999999976555433 33221                 245678999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      |++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++|+++|.|++   .|+|
T Consensus        66 D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~I  142 (256)
T d1ulua_          66 DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGI  142 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEE
T ss_pred             ccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEE
Confidence            9999999999999999999999999999998542   345678899999999999999999999999999975   4899


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHH
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  283 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA  283 (388)
                      |++||. ++..+.|+..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++........  ..      ..+...
T Consensus       143 v~isS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~--~~------~~~~~~  213 (256)
T d1ulua_         143 VTLTYY-ASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFT--KM------YDRVAQ  213 (256)
T ss_dssp             EEEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CH--HH------HHHHHH
T ss_pred             EEEeeh-HhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhH--HH------HHHHHh
Confidence            999998 678889999999999999999999999999999999999999999999865432111  00      112334


Q ss_pred             HHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          284 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..+++|+..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       214 ~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         214 TAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence            5578899999999999999999999999999999999984

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.9e-45  Score=342.06  Aligned_cols=252  Identities=20%  Similarity=0.268  Sum_probs=214.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++++                 .+.++.+++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~   74 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-----------------NGSDAACVK   74 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh-----------------hCCceeeEe
Confidence            3467999999999999999999999999999999999877 5567777777665                 356799999


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|++|+++++++++++.+++|++|++|||+|... ..++.+.+.++|++++++|+.+++.++|+++|+|+++   |++++
T Consensus        75 ~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~---g~~i~  150 (272)
T d1g0oa_          75 ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG---GRLIL  150 (272)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT---CEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeeccccccccccc---ccccc
Confidence            9999999999999999999999999999999987 7899999999999999999999999999999999854   78888


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHH----
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET----  281 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~----  281 (388)
                      ++|+.+...+.+....|++||+|+++|+++|+.|++++|||||+|+||+|+|++.............   ...+++    
T Consensus       151 i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~---~~~~~~~~~~  227 (272)
T d1g0oa_         151 MGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGE---NLSNEEVDEY  227 (272)
T ss_dssp             ECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCT---TCCHHHHHHH
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhccc---ccchHHHHHH
Confidence            8887556667888899999999999999999999999999999999999999986543221111100   111222    


Q ss_pred             --HHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcc
Q 016493          282 --VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  322 (388)
Q Consensus       282 --vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  322 (388)
                        ....+++|+..|+|++..+.||+++...+++|..+..||++
T Consensus       228 ~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         228 AAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence              23346788999999999999999999999999999888876

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.8e-45  Score=335.66  Aligned_cols=229  Identities=17%  Similarity=0.236  Sum_probs=197.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++                          ....++.||+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------------------------~~~~~~~~Dv~~   55 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR--------------------------SGHRYVVCDLRK   55 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------------------------TCSEEEECCTTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------------------------cCCcEEEcchHH
Confidence            689999999999999999999999999999999999765532                          123457899986


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .      ++.+.+++|++|+||||||+.. ..++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||+++|. 
T Consensus        56 ~------~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~-  126 (234)
T d1o5ia_          56 D------LDLLFEKVKEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSF-  126 (234)
T ss_dssp             C------HHHHHHHSCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred             H------HHHHHHHhCCCcEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-ccccccccccc-
Confidence            4      4456678899999999999876 6889999999999999999999999999999999987 57999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhh
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  290 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~  290 (388)
                      .+..+.+....|++||+|+.+|+++++.|++++|||||+|+||+++|++..........         .+...+.+++|+
T Consensus       127 ~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~---------~~~~~~~pl~R~  197 (234)
T d1o5ia_         127 SVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK---------KQVESQIPMRRM  197 (234)
T ss_dssp             GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH---------HHHHTTSTTSSC
T ss_pred             cccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHH---------HHHHhcCCCCCC
Confidence            67788899999999999999999999999999999999999999999986543221110         112234578889


Q ss_pred             hhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          291 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       291 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      ..|+|++..+.||++++..+++|+.+..||+|.
T Consensus       198 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         198 AKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHhChhhcCCcCcEEEECcccc
Confidence            999999999999999999999999999999984

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.6e-45  Score=346.10  Aligned_cols=234  Identities=24%  Similarity=0.277  Sum_probs=204.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC---------hHHHHHHHHHHHHHHhhhhhhcCCCCcccccC
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS---------SESVRMTVTELEENLKEGMMAAGGSSKKNLVH  118 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~---------~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~  118 (388)
                      +|+++||++|||||++|||+++|++|+++|++|++.+|+         .+.++++.+++..                   
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-------------------   62 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-------------------   62 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-------------------
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-------------------
Confidence            578999999999999999999999999999999998664         4455666665543                   


Q ss_pred             ceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 016493          119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  198 (388)
Q Consensus       119 ~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  198 (388)
                       +.....+|++|.++++++++.+.+++|+||+||||||+.. .+++.+.+.++|++++++|+.|+++++|+++|+|+++ 
T Consensus        63 -~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-  139 (302)
T d1gz6a_          63 -RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-  139 (302)
T ss_dssp             -TTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             -cccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-
Confidence             2334678999999999999999999999999999999987 6899999999999999999999999999999999988 


Q ss_pred             CCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccC
Q 016493          199 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  278 (388)
Q Consensus       199 ~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  278 (388)
                      +.|+||++||. ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||++.|++....               
T Consensus       140 ~~G~IV~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---------------  203 (302)
T d1gz6a_         140 NYGRIIMTASA-SGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---------------  203 (302)
T ss_dssp             TCEEEEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---------------
T ss_pred             CCcEEEEeCCh-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---------------
Confidence            57999999998 67788999999999999999999999999999999999999999988753221               


Q ss_pred             HHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCccccc
Q 016493          279 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  325 (388)
Q Consensus       279 pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  325 (388)
                      +++     +.+...|++++..+.||+++.. +.+|+.+.+||+|...
T Consensus       204 ~~~-----~~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         204 PED-----LVEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             CHH-----HHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEEEE
T ss_pred             cHh-----hHhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCCceeE
Confidence            121     2334578899999999999876 6799999999998654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-44  Score=332.53  Aligned_cols=242  Identities=18%  Similarity=0.241  Sum_probs=203.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+                      ...+....+|+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------------------~~~~~~~~~d~~   60 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------------------YPGIQTRVLDVT   60 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------------------STTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------------------ccCCceeeeecc
Confidence            3899999999999999999999999999999999999887654322                      134677889998


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      +.+.++.    ..+.++++|+||||||... .+++.+.+.++|++.+++|+.+++.++|+++|.|.++ +.|+||+++|.
T Consensus        61 ~~~~~~~----~~~~~~~id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~  134 (245)
T d2ag5a1          61 KKKQIDQ----FANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSV  134 (245)
T ss_dssp             CHHHHHH----HHHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS
T ss_pred             ccccccc----cccccccceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeech
Confidence            8766655    4456689999999999987 6889999999999999999999999999999999988 57999999988


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                      .+...+.+...+|+++|+|+++|+|+|+.|++++|||||+|+||+|+||+............    ....+...+.+++|
T Consensus       135 ~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~----~~~~~~~~~~pl~R  210 (245)
T d2ag5a1         135 ASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPE----EARNDFLKRQKTGR  210 (245)
T ss_dssp             BTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHH----HHHHHHHHTCTTSS
T ss_pred             hhccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhH----HHHHHHHhcCCCCC
Confidence            55566788999999999999999999999999999999999999999998654221110000    00122334567788


Q ss_pred             hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          290 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       290 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       211 ~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            9999999999999999999999999999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=334.64  Aligned_cols=250  Identities=21%  Similarity=0.232  Sum_probs=216.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.++.                +.++.++++|+
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~----------------g~~~~~~~~D~   84 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT----------------GNKVHAIQCDV   84 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH----------------SSCEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc----------------CCceEEEEecc
Confidence            48999999999999999999999999999999999999999999998887653                46788999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +++++++++++.+.++++++|+||||||... ..++.+.+.+++++.+.+|+.+.+.+.+...+.+......+.+++++|
T Consensus        85 ~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss  163 (294)
T d1w6ua_          85 RDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT  163 (294)
T ss_dssp             TCHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             cChHHHHHHhhhhhhhccccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhccccccccccccccccc
Confidence            9999999999999999999999999999987 688899999999999999999999999998888887766778888887


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          209 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       209 ~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      . ++..+.++..+|++||+|+++|++.||.|++++|||||+|+||+|+|++...........       ..+..+..+++
T Consensus       164 ~-~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-------~~~~~~~~pl~  235 (294)
T d1w6ua_         164 I-YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF-------EKEMIGRIPCG  235 (294)
T ss_dssp             T-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH-------HHHHHTTCTTS
T ss_pred             c-hhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHH-------HHHHhhcCCCC
Confidence            6 667788889999999999999999999999999999999999999999875543221111       12233445788


Q ss_pred             hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          289 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      |+..|+|++..+.||+++...+++|+.+..||++.
T Consensus       236 R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         236 RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence            99999999999999999999899999999998863

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-41  Score=316.48  Aligned_cols=194  Identities=25%  Similarity=0.244  Sum_probs=175.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~---~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      .++||++|||||++|||+++|++|++   +|++|++++|++++++++.+++.++.+               +.++.+++|
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~---------------~~~~~~~~~   67 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP---------------DLKVVLAAA   67 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT---------------TSEEEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC---------------CceEEEEEc
Confidence            57899999999999999999999996   799999999999999999999877532               468999999


Q ss_pred             cCCCHHHHHHHHHHHHh----hcCCccEEEEccccCC--CCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-C
Q 016493          127 DVCEPADVQKLSNFAVN----EFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-K  199 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~----~~g~iD~li~nAG~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~  199 (388)
                      |++|+++++++++.+.+    .++.+|++|||||...  +.+++.+.+.++|++++++|+.++++++|+++|+|++++ .
T Consensus        68 Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~  147 (259)
T d1oaaa_          68 DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL  147 (259)
T ss_dssp             CTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC
T ss_pred             cCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCC
Confidence            99999999999998876    3467999999999854  245688999999999999999999999999999999874 3


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccc
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  261 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~  261 (388)
                      .|+||++||. ++..+.+++..|++||+|+.+|+++|+.|  .+|||||+|+||+|+|+|..
T Consensus       148 ~g~Iv~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~  206 (259)
T d1oaaa_         148 SKTVVNISSL-CALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQ  206 (259)
T ss_dssp             EEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHH
T ss_pred             cccccccccc-cccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHH
Confidence            6899999998 78899999999999999999999999999  56999999999999999864

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.9e-41  Score=312.38  Aligned_cols=216  Identities=21%  Similarity=0.274  Sum_probs=178.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+++||+||||||++|||+++|++|+++|++|++++|+.++.+++ +++.+..               .+.++.++.+|+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~---------------~~~~~~~~~~d~   64 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAIN---------------PKVNITFHTYDV   64 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHC---------------TTSEEEEEECCT
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhC---------------CCCCEEEEEeec
Confidence            579999999999999999999999999999999999888776554 3333321               346899999999


Q ss_pred             C-CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC--CCCcEEEE
Q 016493          129 C-EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ--PKGGHIFN  205 (388)
Q Consensus       129 s-~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~~g~Iv~  205 (388)
                      + +.++++++++++.+++|+||+||||||..         +.+.|++++++|+.|+++++++++|.|.++  +.+|+||+
T Consensus        65 ~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~  135 (254)
T d1sbya1          65 TVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIAN  135 (254)
T ss_dssp             TSCHHHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEE
Confidence            8 67789999999999999999999999963         346799999999999999999999999765  24689999


Q ss_pred             ecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccch--h----hhhhhhhccCH
Q 016493          206 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--N----KQMFNIICELP  279 (388)
Q Consensus       206 isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~--~----~~~~~~~~~~p  279 (388)
                      +||. ++..+.+++..|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.+......  .    .........+|
T Consensus       136 isS~-~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (254)
T d1sbya1         136 ICSV-TGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTS  214 (254)
T ss_dssp             ECCG-GGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEH
T ss_pred             Eech-hhccCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCH
Confidence            9998 778899999999999999999999999999999999999999999999865432211  1    11111222357


Q ss_pred             HHHHHHHhhhh
Q 016493          280 ETVARTLVPRI  290 (388)
Q Consensus       280 e~vA~~~l~~~  290 (388)
                      |++|+.++..+
T Consensus       215 e~va~~~~~~~  225 (254)
T d1sbya1         215 EQCGQNFVKAI  225 (254)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            77776665433

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-40  Score=306.76  Aligned_cols=217  Identities=21%  Similarity=0.276  Sum_probs=193.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++||++||||||+|||+++|++|+++|++|++++|++++++++.+++.+.                .+..+..+.+|+++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~----------------~~~~~~~~~~d~~~   75 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL----------------GAASAHYIAGTMED   75 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------TCSEEEEEECCTTC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh----------------hcccchhhhhhhhh
Confidence            89999999999999999999999999999999999999999998887664                34678899999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      .+.+....+.+.+.+|.+|+++||||... ..++.+.+.++|++++++|+.+++.+++.++|.|+++  +|+||++||. 
T Consensus        76 ~~~~~~~~~~~~~~~g~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~-  151 (269)
T d1xu9a_          76 MTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSL-  151 (269)
T ss_dssp             HHHHHHHHHHHHHHHTSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEG-
T ss_pred             HHHHHHHHHHHHHHhCCcccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccc-
Confidence            99999999999999999999999999987 6788899999999999999999999999999999864  5999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~--~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      ++..+.|+...|++||+|+.+|+++|+.|+++  .||+||+|+||+|+|++........    ......+||++|+.++.
T Consensus       152 ~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~----~~~~~~~~e~~a~~i~~  227 (269)
T d1xu9a_         152 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----VHMQAAPKEECALEIIK  227 (269)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----GGGGCBCHHHHHHHHHH
T ss_pred             hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC----ccccCCCHHHHHHHHHH
Confidence            78899999999999999999999999999974  5799999999999999875432211    12234579999999887


Q ss_pred             hhh
Q 016493          289 RIR  291 (388)
Q Consensus       289 ~~~  291 (388)
                      ...
T Consensus       228 ~~~  230 (269)
T d1xu9a_         228 GGA  230 (269)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            554

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-40  Score=310.66  Aligned_cols=192  Identities=19%  Similarity=0.241  Sum_probs=164.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEE---EEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVV---VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vi---l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .|+|||||||+|||+++|++|+++|++|+   +..|+.+..+++.+..++...              .+.++.+++||++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~--------------~~~~~~~~~~Dv~   67 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALAC--------------PPGSLETLQLDVR   67 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTC--------------CTTSEEEEECCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhc--------------cCCceEEEecccc
Confidence            47899999999999999999999998754   456766655544444333111              3568999999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      |+++++++++++.+  |++|+||||||... .+++.+.+.++|++++++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus        68 ~~~~~~~~~~~~~~--g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~  143 (285)
T d1jtva_          68 DSKSVAAARERVTE--GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSV  143 (285)
T ss_dssp             CHHHHHHHHHTCTT--SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEG
T ss_pred             chHhhhhhhhhccc--cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEech
Confidence            99999999988743  89999999999987 6889999999999999999999999999999999987 57999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccC
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~  263 (388)
                       ++..+.|+...|++||+|+.+|+++|+.|++++||+||+|+||+|+|++....
T Consensus       144 -~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~  196 (285)
T d1jtva_         144 -GGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (285)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHh
Confidence             78899999999999999999999999999999999999999999999997653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-41  Score=312.96  Aligned_cols=220  Identities=21%  Similarity=0.269  Sum_probs=184.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~-G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|||||++|||+++|++|+++ |++|++++|++++++++.+++++.                 +.++.+++||++|.
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~-----------------~~~~~~~~~Dvs~~   65 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----------------GLSPRFHQLDIDDL   65 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-----------------TCCCEEEECCTTCH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-----------------CCcEEEEEEecCCH
Confidence            356699999999999999999986 899999999999999999998763                 45688999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ++++++++++.+++|+||+||||||+.. ..+..+.+.++|++++++|++|+++++++++|.|++   .|+||++||..+
T Consensus        66 ~sv~~~~~~~~~~~g~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~  141 (275)
T d1wmaa1          66 QSIRALRDFLRKEYGGLDVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMS  141 (275)
T ss_dssp             HHHHHHHHHHHHHHSSEEEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccce
Confidence            9999999999999999999999999987 577788888999999999999999999999999975   489999998521


Q ss_pred             ----------------------------------------CCCCCCCchhhHHHHHHHHHHHHHHHHHhCC----CCeEE
Q 016493          212 ----------------------------------------GGSSTPLTAVYGSTKCGLRQLQASLFKESKR----SKVGV  247 (388)
Q Consensus       212 ----------------------------------------~~~~~~~~~~Y~aSK~al~~l~~~la~el~~----~gI~v  247 (388)
                                                              ......+..+|++||+++.+|++.+++|+++    .||+|
T Consensus       142 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~v  221 (275)
T d1wmaa1         142 VRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL  221 (275)
T ss_dssp             HHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEE
T ss_pred             eccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence                                                    0112233457999999999999999998864    59999


Q ss_pred             EEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhhhhhcccccc-ceeecc
Q 016493          248 HTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGK-AINYLT  304 (388)
Q Consensus       248 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~-~~~~l~  304 (388)
                      |+|+||+|+|+|.....           ..+||++|+.++.....+++... +..|+.
T Consensus       222 n~v~PG~v~T~m~~~~~-----------~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         222 NACCPGWVRTDMAGPKA-----------TKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             EEEECCSBCSTTTCTTC-----------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             EEEecccccCCcccCcc-----------cCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence            99999999999865432           23799999999887665555433 334443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4.5e-39  Score=296.67  Aligned_cols=193  Identities=21%  Similarity=0.264  Sum_probs=167.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH---HCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           53 PRNVVITGSTRGLGKALAREFL---LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La---~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .|+|||||||+|||+++|++|+   ++|++|++++|++++++++.+ +.+.                 +.++.+++||++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~-----------------~~~~~~~~~Dvs   63 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN-----------------HSNIHILEIDLR   63 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH-----------------CTTEEEEECCTT
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc-----------------CCcEEEEEEEec
Confidence            5899999999999999999996   579999999999999877643 3321                 357899999999


Q ss_pred             CHHHHHHHHHHHHh--hcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC----------
Q 016493          130 EPADVQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ----------  197 (388)
Q Consensus       130 ~~~~v~~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----------  197 (388)
                      |+++++++++++.+  .++++|+||||||+..+..++.+.+.++|++++++|+.|++.++++++|+|+++          
T Consensus        64 ~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~  143 (248)
T d1snya_          64 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMG  143 (248)
T ss_dssp             CGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSS
T ss_pred             cHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccc
Confidence            99999999998854  678999999999997655678899999999999999999999999999999863          


Q ss_pred             CCCcEEEEecCCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccC
Q 016493          198 PKGGHIFNMDGAGSGG--SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG  263 (388)
Q Consensus       198 ~~~g~Iv~isS~~~~~--~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~  263 (388)
                      ...|++|+++|..+..  .+.++..+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|....
T Consensus       144 ~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~  211 (248)
T d1snya_         144 VGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS  211 (248)
T ss_dssp             TTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred             ccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc
Confidence            2468999999974332  34566789999999999999999999999999999999999999997543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.2e-39  Score=297.98  Aligned_cols=213  Identities=18%  Similarity=0.270  Sum_probs=170.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.|+||||||++|||+++|++|+++|+  +|++.+|+.++++++.+.                    .+.++++++||++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~--------------------~~~~~~~~~~Dvs   61 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI--------------------KDSRVHVLPLTVT   61 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC--------------------CCTTEEEEECCTT
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh--------------------hCCceEEEEEecC
Confidence            569999999999999999999999996  689999999887654221                    3457899999999


Q ss_pred             CHHHHHHHHHHHHhhcCC--ccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC---------
Q 016493          130 EPADVQKLSNFAVNEFGS--IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---------  198 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~--iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---------  198 (388)
                      |.++++++++++.+.++.  +|+||||||+..+..++.+.+.++|++++++|+.|++++++.++|+|++++         
T Consensus        62 ~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~  141 (250)
T d1yo6a1          62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLS  141 (250)
T ss_dssp             CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCcccc
Confidence            999999999999988764  999999999876567888999999999999999999999999999998642         


Q ss_pred             -CCcEEEEecCCCCC------CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhh
Q 016493          199 -KGGHIFNMDGAGSG------GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM  271 (388)
Q Consensus       199 -~~g~Iv~isS~~~~------~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  271 (388)
                       ..++++++++....      ..+..+..+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|.....       
T Consensus       142 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~-------  214 (250)
T d1yo6a1         142 VSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-------  214 (250)
T ss_dssp             TTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------
T ss_pred             ceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC-------
Confidence             24789998865211      1223345679999999999999999999999999999999999999864321       


Q ss_pred             hhhhccCHHHHHHHHhhhhhhccc
Q 016493          272 FNIICELPETVARTLVPRIRVVKG  295 (388)
Q Consensus       272 ~~~~~~~pe~vA~~~l~~~~~~~~  295 (388)
                          ..+||+.++.++..+..++.
T Consensus       215 ----~~~~e~~a~~~~~~~~~~~~  234 (250)
T d1yo6a1         215 ----ALTVEQSTAELISSFNKLDN  234 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCG
T ss_pred             ----CCCHHHHHHHHHHHHhcCCC
Confidence                23789999998887765443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-38  Score=289.48  Aligned_cols=225  Identities=21%  Similarity=0.253  Sum_probs=184.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .......+|+.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--------------------~~~~~~~~~~~   61 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--------------------NNCVFAPADVT   61 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--------------------TTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--------------------CCccccccccc
Confidence            6899999999999999999999999999999999999999988776652                    45778899999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCC-----CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CC
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PK  199 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~  199 (388)
                      +.++++...+.+...++.+|.+++|+++...     ..++.+.+.++|++++++|+.++++++|+++|+|..+     .+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~  141 (248)
T d2o23a1          62 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ  141 (248)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC
T ss_pred             ccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCC
Confidence            9999999999999999999999999887542     2355677899999999999999999999999998754     24


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCH
Q 016493          200 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  279 (388)
Q Consensus       200 ~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  279 (388)
                      .|+||++||. ++..+.++.++|++||+|+++|+++|+.|++++|||||+|+||+++|++............        
T Consensus       142 ~G~Ii~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--------  212 (248)
T d2o23a1         142 RGVIINTASV-AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFL--------  212 (248)
T ss_dssp             CEEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHH--------
T ss_pred             ceEEEEecch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHH--------
Confidence            6899999998 6778899999999999999999999999999999999999999999998765332211111        


Q ss_pred             HHHHHHHh-hhhhhccccccceeeccC
Q 016493          280 ETVARTLV-PRIRVVKGSGKAINYLTP  305 (388)
Q Consensus       280 e~vA~~~l-~~~~~~~~~~~~~~~l~~  305 (388)
                        ..+.++ +|+..|+|++..+.||++
T Consensus       213 --~~~~pl~~R~g~peevA~~v~fL~s  237 (248)
T d2o23a1         213 --ASQVPFPSRLGDPAEYAHLVQAIIE  237 (248)
T ss_dssp             --HHTCSSSCSCBCHHHHHHHHHHHHH
T ss_pred             --HhcCCCCCCCcCHHHHHHHHHHHHh
Confidence              112222 556666777766667654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.5e-39  Score=296.84  Aligned_cols=244  Identities=14%  Similarity=0.151  Sum_probs=204.8

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++...                 ..+...+.+|
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~~~   63 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ-----------------LGSDIVLQCD   63 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH-----------------TTCCCEEECC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh-----------------cCCcceeecc
Confidence            37899999999998  899999999999999999999996655444 333331                 2456778999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC-----cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP-----LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      +++..++...++++.+.++++|++||||+.... ..     ......+.+...+++|+.+.+.+++.+.|.|++   ++.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  139 (258)
T d1qsga_          64 VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPG-DQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSA  139 (258)
T ss_dssp             TTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCG-GGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEE
T ss_pred             cchHHHHHHHHHHhhhcccccceEEEeeccccc-ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcE
Confidence            999999999999999999999999999998652 22     235666789999999999999999999998864   467


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHH
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  282 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~v  282 (388)
                      |+++||. ++..+.|....|++||+|+++|++++++|++++|||||+|+||+|+|++.........  .      ..+..
T Consensus       140 Ii~iss~-~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~--~------~~~~~  210 (258)
T d1qsga_         140 LLTLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRK--M------LAHCE  210 (258)
T ss_dssp             EEEEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHH--H------HHHHH
T ss_pred             EEEecch-hhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhh--H------HHHHH
Confidence            9999887 6778889999999999999999999999999999999999999999998654321111  0      12334


Q ss_pred             HHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          283 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       283 A~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      .+.+++|+..|+|++..+.||++++..+.+|+.+..||+|.-
T Consensus       211 ~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i  252 (258)
T d1qsga_         211 AVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  252 (258)
T ss_dssp             HHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hCCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHH
Confidence            566788999999999999999999999999999999999853

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.8e-38  Score=294.06  Aligned_cols=256  Identities=16%  Similarity=0.145  Sum_probs=192.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHHhhhhhhcCCC-CcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGS-SKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .++|||||++|||+++|++|+++|++|++++| ++++++++.+++.+..+........+ ..............+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            57999999999999999999999999998765 56667777777776543211100000 00111223455677889999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHH--------------HHHHhhchHHHHHHHHHHHHHHc-
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE--------------QIVSTNLVGSILCTREAMRVMRD-  196 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~--------------~~~~vN~~g~~~l~~~~lp~m~~-  196 (388)
                      ++++++++++.+++|+||+||||||+.. ..++.+.+.++|+              .++++|+.++++++|.+.+.+.. 
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999999999999999999999999977 5777777666554              47899999999999999987642 


Q ss_pred             ----CCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhh
Q 016493          197 ----QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF  272 (388)
Q Consensus       197 ----~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  272 (388)
                          ++..++|++++|. ....+.++..+|++||+|+.+|+++|++|++++|||||+|+||++.|...  .....   . 
T Consensus       162 ~~~~~~~~~~ii~~~s~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--~~~~~---~-  234 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--MPPAV---W-  234 (284)
T ss_dssp             CGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--SCHHH---H-
T ss_pred             HHHhcCCCCcccccccc-cccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--CCHHH---H-
Confidence                3356789999887 67788899999999999999999999999999999999999998655321  11100   0 


Q ss_pred             hhhccCHHHHHHHH-hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          273 NIICELPETVARTL-VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       273 ~~~~~~pe~vA~~~-l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                            .+...+.+ .+|+..|+|++..+.||++++..+++|+.+.+||+|.
T Consensus       235 ------~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         235 ------EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             ------HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ------HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence                  01112223 3788899999999999999999999999999999984

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.7e-38  Score=296.67  Aligned_cols=263  Identities=16%  Similarity=0.137  Sum_probs=198.1

Q ss_pred             ccCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           48 HCKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        48 ~~~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +++++||++|||||++  |||+++|++|+++|++|++++|++..........+.......   ...........++..+.
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   79 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSR---VLPDGSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGG---BCTTSSBCCEEEEEEEC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhh---hhhhhhhhhhhhhhhhh
Confidence            5789999999999875  999999999999999999999986654333222211111000   00000000011222222


Q ss_pred             cc------------------CCCHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHH
Q 016493          126 CD------------------VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILC  186 (388)
Q Consensus       126 ~D------------------ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l  186 (388)
                      .+                  .++..+++++++++.++||+||+||||||.... ..++.+.+.++|++++++|+.+++++
T Consensus        80 ~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~  159 (297)
T d1d7oa_          80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             hhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhh
Confidence            22                  355667889999999999999999999998542 46789999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcccccccccCcc
Q 016493          187 TREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGST  265 (388)
Q Consensus       187 ~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~-~~gI~vn~v~PG~v~T~~~~~~~~  265 (388)
                      +++++|.|.++   ++++++++........+....|+++|+++.++++.++.|++ ++|||||+|+||+|+|++......
T Consensus       160 ~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~  236 (297)
T d1d7oa_         160 LSHFLPIMNPG---GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             HHHHGGGEEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             hhHHHHHhhcC---CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccC
Confidence            99999988754   56666666544555567778999999999999999999996 579999999999999998754321


Q ss_pred             chhhhhhhhhccCHHHHHHHHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          266 IQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       266 ~~~~~~~~~~~~~pe~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      .  +..      ......+.+++|+..|+|++..+.||+++...+++|+.+.+||++..
T Consensus       237 ~--~~~------~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         237 I--DTM------IEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             H--HHH------HHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             C--HHH------HHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence            1  111      11223345688899999999999999999999999999999999853

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.9e-38  Score=300.38  Aligned_cols=263  Identities=12%  Similarity=0.095  Sum_probs=196.9

Q ss_pred             CCeEEEEc--CCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE------
Q 016493           53 PRNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI------  124 (388)
Q Consensus        53 gk~vlITG--as~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~------  124 (388)
                      +|++||||  +++|||+++|++|+++|++|++++++............++...........     ........      
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   76 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDK-----KMNILDMLPFDASF   76 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTE-----ECCEEEEEECCTTC
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHh-----hhhhhhccccccee
Confidence            69999999  568999999999999999999999987765544443322221110000000     01112222      


Q ss_pred             --------------EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCC-CCCcCCCCHHHHHHHHHhhchHHHHHHHH
Q 016493          125 --------------ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTRE  189 (388)
Q Consensus       125 --------------~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  189 (388)
                                    .+|+++.++++++++++.+.||+||+||||||...+ .+++.+.+.++|++++++|+++++.++|+
T Consensus        77 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~  156 (329)
T d1uh5a_          77 DTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKY  156 (329)
T ss_dssp             SSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             hhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHH
Confidence                          347778889999999999999999999999998653 25788999999999999999999999999


Q ss_pred             HHHHHHcCCCCcEEEEecCCCCCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccccccccCcc--
Q 016493          190 AMRVMRDQPKGGHIFNMDGAGSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGST--  265 (388)
Q Consensus       190 ~lp~m~~~~~~g~Iv~isS~~~~~~~~~~-~~~Y~aSK~al~~l~~~la~el~~-~gI~vn~v~PG~v~T~~~~~~~~--  265 (388)
                      ++|+|++   .|+||++||. ++..+.|+ ...|++||+|+++|+|+|+.||++ +|||||+|+||+|+|+.......  
T Consensus       157 ~~~~m~~---~GsIv~iss~-~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~  232 (329)
T d1uh5a_         157 FVNIMKP---QSSIISLTYH-ASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN  232 (329)
T ss_dssp             HGGGEEE---EEEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---
T ss_pred             HHhhccc---ccccccceee-hhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchh
Confidence            9999964   5899999987 56667776 467999999999999999999986 69999999999999954322100  


Q ss_pred             ----------------------------chhhhhhhhhccCH-----HHHHHHHhhhhhhccccccceeeccCHHHHHHH
Q 016493          266 ----------------------------IQNKQMFNIICELP-----ETVARTLVPRIRVVKGSGKAINYLTPPRILLAL  312 (388)
Q Consensus       266 ----------------------------~~~~~~~~~~~~~p-----e~vA~~~l~~~~~~~~~~~~~~~l~~~~~~~~~  312 (388)
                                                  ..............     ......+++|+..|+|++..+.||+|+...+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iT  312 (329)
T d1uh5a_         233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAIT  312 (329)
T ss_dssp             ---------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             hhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCcc
Confidence                                        00000000000011     122334778999999999999999999999999


Q ss_pred             HHhHhhcCcccc
Q 016493          313 VTAWLRRGRWFD  324 (388)
Q Consensus       313 ~~~~~~~g~~~~  324 (388)
                      |+.+.+||++..
T Consensus       313 Gq~i~VDGG~~~  324 (329)
T d1uh5a_         313 GQTIYVDNGLNI  324 (329)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCeEEECCCccc
Confidence            999999999743

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=7.2e-38  Score=292.29  Aligned_cols=247  Identities=13%  Similarity=0.100  Sum_probs=191.7

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~--GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.++                 +....++++|
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~-----------------~~~~~~~~~d   63 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE-----------------LNSPYVYELD   63 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH-----------------TTCCCEEECC
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh-----------------CCceeEeeec
Confidence            47899999999765  9999999999999999999999954 44445555443                 2456678999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCC---CCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      +++.++++++++++.+.+|++|++|||+|.....   ....+...+.+...+.++..+.....+...+.++   ..+.|+
T Consensus        64 ~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~  140 (274)
T d2pd4a1          64 VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVL  140 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEE
T ss_pred             ccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc---cCccee
Confidence            9999999999999999999999999999986532   2233344455555555555555555555444322   334566


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++|+. +...+.+....|+++|+|+.+++++++.|++++|||||+|+||+++|++..........        .......
T Consensus       141 ~~s~~-~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~--------~~~~~~~  211 (274)
T d2pd4a1         141 TLSYL-GSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMI--------LKWNEIN  211 (274)
T ss_dssp             EEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHH--------HHHHHHH
T ss_pred             eeccc-ccccccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHH--------HHHHhhh
Confidence            66665 66777888899999999999999999999999999999999999999986543321110        1223345


Q ss_pred             HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccccc
Q 016493          285 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ  326 (388)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~  326 (388)
                      .+++|+..|+|++..+.||+++...+++|+.+.+||+|....
T Consensus       212 ~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~g  253 (274)
T d2pd4a1         212 APLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMG  253 (274)
T ss_dssp             STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBS
T ss_pred             hhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChhhcc
Confidence            667889999999999999999999999999999999996543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-36  Score=275.99  Aligned_cols=202  Identities=14%  Similarity=0.092  Sum_probs=167.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +||+||||||++|||+++|++|+++|++|+++++++.+.                           ........+|.++.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~---------------------------~~~~~~~~~~~~~~   53 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------------------------ASASVIVKMTDSFT   53 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------------------------SSEEEECCCCSCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------------------ccccceeecccCcH
Confidence            589999999999999999999999999999999875421                           23455678899989


Q ss_pred             HHHHHHHHHHHhhc--CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 016493          132 ADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  209 (388)
Q Consensus       132 ~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  209 (388)
                      ++++.+.+.+.+.+  +++|+||||||......++.+.+.++|++++++|+.++++++++++|+|++   +|+||++||.
T Consensus        54 ~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~  130 (236)
T d1dhra_          54 EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAK  130 (236)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG
T ss_pred             HHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccH
Confidence            99988888887765  469999999997553456677778999999999999999999999999974   5899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          210 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       210 ~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                       ++..+.++...|++||+|+++|+++|+.|++  ++|||||+|+||+|+||+.+...+..+..    ...+||++|+.+.
T Consensus       131 -~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~----~~~~pe~va~~~~  205 (236)
T d1dhra_         131 -AALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFS----SWTPLEFLVETFH  205 (236)
T ss_dssp             -GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSCGG----GSEEHHHHHHHHH
T ss_pred             -HHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccchhh----cCCCHHHHHHHHH
Confidence             6788999999999999999999999999998  57999999999999999875432211111    1124777777665


Q ss_pred             h
Q 016493          288 P  288 (388)
Q Consensus       288 ~  288 (388)
                      .
T Consensus       206 ~  206 (236)
T d1dhra_         206 D  206 (236)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=9.5e-36  Score=276.10  Aligned_cols=240  Identities=21%  Similarity=0.248  Sum_probs=189.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC---
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC---  129 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls---  129 (388)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.                .+.+....++|+.   
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~   65 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA----------------RAGSAVLCKGDLSLSS   65 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCSSST
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh----------------cCCceEEEecccccch
Confidence            479999999999999999999999999999998665 56666776654                2345666666554   


Q ss_pred             -CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcC-----------CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 016493          130 -EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-----------QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  197 (388)
Q Consensus       130 -~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~-----------~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  197 (388)
                       +.+.++++++.+.+++|++|+||||||+..+ .++.           +...+.+...+.+|+.+++...+...+.+...
T Consensus        66 ~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (266)
T d1mxha_          66 SLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG  144 (266)
T ss_dssp             THHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---
T ss_pred             hHHHHHHHHHHHHHHHhCCCCEEEECCccCCC-Ccccccccccchhcccccccccccccccccccccchhhhhccccccc
Confidence             3677888889999999999999999998763 3322           23345678889999999999999988887653


Q ss_pred             ----CCCcEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhh
Q 016493          198 ----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN  273 (388)
Q Consensus       198 ----~~~g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  273 (388)
                          ...+.++++++. .+..+.|++..|++||+|+++|+++++.|++++|||||+|+||+++|++.....  ..     
T Consensus       145 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~--~~-----  216 (266)
T d1mxha_         145 GAWRSRNLSVVNLCDA-MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQE--TQ-----  216 (266)
T ss_dssp             ----CCCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHH--HH-----
T ss_pred             cccccccccchhhhhc-cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHH--HH-----
Confidence                235678888776 678888999999999999999999999999999999999999999998653211  00     


Q ss_pred             hhccCHHHHHHHHhhh-hhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          274 IICELPETVARTLVPR-IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       274 ~~~~~pe~vA~~~l~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                           .+..++.+++| ..+|+|++..+.||++++..+.+|+.+..||+|.
T Consensus       217 -----~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         217 -----EEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             -----HHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -----HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence                 11122234433 4688888999999999999999999999999985

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.2e-35  Score=267.78  Aligned_cols=202  Identities=16%  Similarity=0.119  Sum_probs=165.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++||||||++|||+++|++|+++|++|++++|++++.                           ......+.+|+.+.++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~   55 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---------------------------ADSNILVDGNKNWTEQ   55 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT---------------------------SSEEEECCTTSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc---------------------------ccccceeccccCchhH
Confidence            4579999999999999999999999999999986531                           1234556788888888


Q ss_pred             HHHHHHHHHh--hcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          134 VQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       134 v~~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      .+...+.+.+  ++++||+||||||+.....+..+.+.+.|+.++++|+.++++++|+++|+|++   +|+||++||. +
T Consensus        56 ~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~-~  131 (235)
T d1ooea_          56 EQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAA-A  131 (235)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG-G
T ss_pred             HHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccH-H
Confidence            8777777666  45899999999998653345566667889999999999999999999999974   4899999998 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhhh
Q 016493          212 GGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  289 (388)
Q Consensus       212 ~~~~~~~~~~Y~aSK~al~~l~~~la~el~--~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~~  289 (388)
                      +..+.++...|++||+|+++|+++|+.|++  +.+|+||+|+||+++|++.+........    ....+|+++++.++..
T Consensus       132 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~----~~~~~~~~va~~~~~~  207 (235)
T d1ooea_         132 AMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH----SSWTPLSFISEHLLKW  207 (235)
T ss_dssp             GGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCG----GGCBCHHHHHHHHHHH
T ss_pred             hcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCcc----ccCCCHHHHHHHHHHH
Confidence            788999999999999999999999999998  5799999999999999987543322111    1223688888876643


Q ss_pred             h
Q 016493          290 I  290 (388)
Q Consensus       290 ~  290 (388)
                      +
T Consensus       208 l  208 (235)
T d1ooea_         208 T  208 (235)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=4.5e-36  Score=278.90  Aligned_cols=250  Identities=13%  Similarity=0.124  Sum_probs=193.8

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGa--s~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++||++|||||  ++|||+++|++|+++|++|++++|+.+++.+.   +.++                .+.+...++||
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~---~~~~----------------~~~~~~~~~~d   63 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR---ITDR----------------LPAKAPLLELD   63 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHH---HHTT----------------SSSCCCEEECC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHH---HHHH----------------cCCceeeEeee
Confidence            478999999994  57999999999999999999999998775432   2221                34567788999


Q ss_pred             CCCHHHHHHHHHHHHhhc---CCccEEEEccccCCC----CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 016493          128 VCEPADVQKLSNFAVNEF---GSIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  200 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~---g~iD~li~nAG~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  200 (388)
                      ++++++++++++.+.+.+   +++|++|||+|+...    ..++.+.+.+++.+.+++|+.+.+...+...+.+..   .
T Consensus        64 v~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  140 (268)
T d2h7ma1          64 VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---G  140 (268)
T ss_dssp             TTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---E
T ss_pred             cccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---c
Confidence            999999999999987765   679999999997531    345678889999999999999999999988776542   2


Q ss_pred             cEEEEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhh-hhhhhccCH
Q 016493          201 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-MFNIICELP  279 (388)
Q Consensus       201 g~Iv~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~p  279 (388)
                      +.|+++ |. ....+.|....|+++|+|+.+|+++++.|++++|||||+|+||+|+|++........... .........
T Consensus       141 ~~i~~~-s~-~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  218 (268)
T d2h7ma1         141 GSIVGM-DF-DPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE  218 (268)
T ss_dssp             EEEEEE-EC-CCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred             cccccc-cc-cccccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHH
Confidence            344444 44 466778889999999999999999999999999999999999999999864322111110 011000011


Q ss_pred             HHH-HHHHhh-hhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          280 ETV-ARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       280 e~v-A~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      +.. .+.++. ++..|+|+++.+.||++|...+++|+.+.+||++.
T Consensus       219 ~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         219 EGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             HHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence            122 223444 48899999999999999999999999999999884

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.3e-36  Score=275.19  Aligned_cols=228  Identities=22%  Similarity=0.222  Sum_probs=185.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|++|||||++|||+++|++|+++|++|++++|+++.                             .+....++|+++..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------------------~~~~~~~~d~~~~~   51 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------------------------EDLIYVEGDVTREE   51 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------------------SSSEEEECCTTCHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------------------ccceEeeccccchh
Confidence            4999999999999999999999999999999998642                             34567899999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCC---CCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CCCcEEE
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIF  204 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~~g~Iv  204 (388)
                      ....+.+...+.. ..|.++++++....   .......+.+.+++++++|+.+++.+++.+.+.+.+.     .+.|+||
T Consensus        52 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii  130 (241)
T d1uaya_          52 DVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV  130 (241)
T ss_dssp             HHHHHHHHHHHHS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEE
T ss_pred             hhHHHHHhhhccc-cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeee
Confidence            9999988877665 45666677665432   2345567889999999999999999999999995432     2579999


Q ss_pred             EecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHH
Q 016493          205 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  284 (388)
Q Consensus       205 ~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~  284 (388)
                      ++||. ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+|++............          ..+
T Consensus       131 ~isS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~----------~~~  199 (241)
T d1uaya_         131 NTASV-AAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASL----------AAQ  199 (241)
T ss_dssp             EECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHH----------HTT
T ss_pred             eecch-hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHH----------Hhc
Confidence            99998 6788899999999999999999999999999999999999999999998765433221111          112


Q ss_pred             HH-hhhhhhccccccceeeccCHHHHHHHHHhHhhcCccc
Q 016493          285 TL-VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  323 (388)
Q Consensus       285 ~~-l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  323 (388)
                      .+ .+|+.+|+|++..+.||+++  .+.+|+.+.+||+|.
T Consensus       200 ~~~~~R~g~pedvA~~v~fL~s~--~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         200 VPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGALR  237 (241)
T ss_dssp             CCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTTCC
T ss_pred             CCCCCCCcCHHHHHHHHHHHHhC--CCCCCCEEEECCccc
Confidence            22 36777888888888899874  478899999999873

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=4.3e-33  Score=256.89  Aligned_cols=220  Identities=16%  Similarity=0.173  Sum_probs=164.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|+||||||++|||+++|++|+++|++|++++|++++                                  ..+|+.+.+
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~----------------------------------~~~d~~~~~   46 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------------------------VIADLSTAE   46 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS----------------------------------EECCTTSHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH----------------------------------HHHHhcCHH
Confidence            3899999999999999999999999999999997531                                  357999999


Q ss_pred             HHHHHHHHHHhhc-CCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          133 DVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      ..+....++..+. +++|++|||||+...        .+.++....+|+.+...+.+..+|.+.+. ....+.++++...
T Consensus        47 ~~~~~~~~~~~~~~~~id~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  117 (257)
T d1fjha_          47 GRKQAIADVLAKCSKGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVAS  117 (257)
T ss_dssp             HHHHHHHHHHTTCTTCCSEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhh-ccCcceeeeeccc
Confidence            8887766655544 579999999998541        23467889999999999999999998876 3455555544311


Q ss_pred             C---------------------------CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCc
Q 016493          212 G---------------------------GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS  264 (388)
Q Consensus       212 ~---------------------------~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~  264 (388)
                      .                           ....++..+|++||+|+++|+|+|+.||+++|||||+|+||+|+||+.....
T Consensus       118 ~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (257)
T d1fjha_         118 AHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL  197 (257)
T ss_dssp             GSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------
T ss_pred             cchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc
Confidence            1                           1122334579999999999999999999999999999999999999875432


Q ss_pred             cchhhhhhhhhccCHHHHHH--HHhhhhhhccccccceeeccCHHHHHHHHHhHhhcCcccc
Q 016493          265 TIQNKQMFNIICELPETVAR--TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  324 (388)
Q Consensus       265 ~~~~~~~~~~~~~~pe~vA~--~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  324 (388)
                      ....         ..+..++  .+++|+..|+|+++.+.||+|++..+.+|+.+..||+|..
T Consensus       198 ~~~~---------~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         198 QDPR---------YGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             --------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCHH---------HHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            2110         1122222  3688999999999999999999999999999999999853

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=8.2e-31  Score=242.27  Aligned_cols=213  Identities=20%  Similarity=0.213  Sum_probs=165.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH---HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~---~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++++|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++++                 .+.++.++.||
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~g~~v~~~~~D   70 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-----------------LGARTTVAACD   70 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-----------------ccccccccccc
Confidence            356999999999999999999999998 6899999754   34555555543                 45789999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|+++++++++.+.+. +++|++|||+|... ..++.+.+.+++++++++|+.+++++.+.+    .+. +.++||++|
T Consensus        71 v~d~~~~~~~~~~i~~~-~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~-~~~~iv~~S  143 (259)
T d2fr1a1          71 VTDRESVRELLGGIGDD-VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELT----REL-DLTAFVLFS  143 (259)
T ss_dssp             TTCHHHHHHHHHTSCTT-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTS-CCSEEEEEE
T ss_pred             cchHHHHHHhhcccccc-cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHHh----hcc-CCceEeeec
Confidence            99999999999988554 68999999999988 689999999999999999999999887653    333 568999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHh
Q 016493          208 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  287 (388)
Q Consensus       208 S~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l  287 (388)
                      |. ++..+.++.+.|+++|+++++|++.++    ..||+|++|+||++.++.+................++|+++++.+.
T Consensus       144 S~-a~~~g~~~~~~YaAaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~  218 (259)
T d2fr1a1         144 SF-ASAFGAPGLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQ  218 (259)
T ss_dssp             EH-HHHTCCTTCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHH
T ss_pred             ch-hhccCCcccHHHHHHHHhHHHHHHHHH----hCCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHH
Confidence            98 678889999999999999988877655    4589999999999976543322111111112233468999988876


Q ss_pred             hhhhhc
Q 016493          288 PRIRVV  293 (388)
Q Consensus       288 ~~~~~~  293 (388)
                      ..+...
T Consensus       219 ~~l~~~  224 (259)
T d2fr1a1         219 NALDRA  224 (259)
T ss_dssp             HHHHTT
T ss_pred             HHHhCC
Confidence            666543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.80  E-value=4.9e-21  Score=168.22  Aligned_cols=156  Identities=12%  Similarity=0.058  Sum_probs=116.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      ...+++||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.                  .++....+
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~   78 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------------------FKVNVTAA   78 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------------HTCCCEEE
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc------------------cchhhhhh
Confidence            356999999999999999999999999999999999999999999988888664                  23445789


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      |++|.+++++++       +++|+||||||+..     ...+.+.|+..+++|+.+.++.+..+.+.+......++++..
T Consensus        79 d~~~~~~~~~~~-------~~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (191)
T d1luaa1          79 ETADDASRAEAV-------KGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGG  146 (191)
T ss_dssp             ECCSHHHHHHHT-------TTCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETT
T ss_pred             hcccHHHHHHHh-------cCcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecc
Confidence            999999887654       57999999999742     456899999999999988887765544433332222232221


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHH
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQA  234 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~  234 (388)
                      ++. .+. ...+...|+++|+++..+++
T Consensus       147 ~~~-~g~-~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         147 KRA-FGA-LGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             EEE-ECH-HHHHHHHHHHHHHHHHHHTS
T ss_pred             eEE-Eec-cCcCcHHHHHHHHHHHHHHh
Confidence            111 111 01223569999999887764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.6e-16  Score=152.01  Aligned_cols=174  Identities=14%  Similarity=0.031  Sum_probs=126.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-----HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+||||||+|.||..++++|+++|++|+.++|....     ++.+..+...                 ...++.++++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl   64 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT-----------------CNPKFHLHYGDL   64 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--------------------------------------CCEEECCCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh-----------------cCCCeEEEEeec
Confidence            899999999999999999999999999999995432     2222211111                 345789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.++++++++.+     .+|+++|.|+....     ..+.++.+..+++|+.|+.++++++...-.+  +..++|++||
T Consensus        65 ~d~~~~~~~~~~~-----~~d~v~h~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~--~~~r~i~~SS  132 (357)
T d1db3a_          65 SDTSNLTRILREV-----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQAST  132 (357)
T ss_dssp             SCHHHHHHHHHHH-----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred             CCHHHHHHHHhcc-----CCCEEEEeeccccc-----chhhhCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEEc
Confidence            9999999998876     78999999998542     1122445678899999999998887543211  3457999987


Q ss_pred             CCC-CC---C------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          209 AGS-GG---S------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       209 ~~~-~~---~------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ... +.   .      +..+...|+.||.+.+.+++..++.+   ++.+..+.|+.+-.|.
T Consensus       133 ~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         133 SELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR  190 (357)
T ss_dssp             GGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             hhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCC
Confidence            521 11   1      11235679999999999999888776   6888899998887764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.8e-15  Score=132.08  Aligned_cols=193  Identities=15%  Similarity=0.081  Sum_probs=124.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ..|+|+||||||+||.+++++|+++|++|++..|+++++...                       ....+.++.+|++|.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~gD~~d~   58 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------------------GPRPAHVVVGDVLQA   58 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------------------SCCCSEEEESCTTSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----------------------cccccccccccccch
Confidence            468899999999999999999999999999999998764211                       234578899999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      +++.++++       +.|++|+++|...+   ....         +++..+..++    ++.+++. +-.++|++||...
T Consensus        59 ~~l~~al~-------~~d~vi~~~g~~~~---~~~~---------~~~~~~~~~l----~~aa~~~-~v~r~i~~ss~~~  114 (205)
T d1hdoa_          59 ADVDKTVA-------GQDAVIVLLGTRND---LSPT---------TVMSEGARNI----VAAMKAH-GVDKVVACTSAFL  114 (205)
T ss_dssp             HHHHHHHT-------TCSEEEECCCCTTC---CSCC---------CHHHHHHHHH----HHHHHHH-TCCEEEEECCGGG
T ss_pred             hhHHHHhc-------CCCEEEEEeccCCc---hhhh---------hhhHHHHHHH----HHHHHhc-CCCeEEEEeeeec
Confidence            98877654       68999999997442   1111         1223333333    4445554 4568999988632


Q ss_pred             CCCC---CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccchhhhhhhhhccCHHHHHHHHhh
Q 016493          212 GGSS---TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  288 (388)
Q Consensus       212 ~~~~---~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~vA~~~l~  288 (388)
                      ...+   .+....|...|...+.+       +...|++...|.||.+......................+.+++|+.+++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~e~~-------l~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~  187 (205)
T d1hdoa_         115 LWDPTKVPPRLQAVTDDHIRMHKV-------LRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLR  187 (205)
T ss_dssp             TSCTTCSCGGGHHHHHHHHHHHHH-------HHHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHH
T ss_pred             cCCCccccccccccchHHHHHHHH-------HHhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHH
Confidence            2211   12223455566554433       3346899999999988543222111111111111222468999999998


Q ss_pred             hhhhcccccc
Q 016493          289 RIRVVKGSGK  298 (388)
Q Consensus       289 ~~~~~~~~~~  298 (388)
                      .+..++-.++
T Consensus       188 ~l~~~~~~g~  197 (205)
T d1hdoa_         188 CLTTDEYDGH  197 (205)
T ss_dssp             TTSCSTTTTC
T ss_pred             HhCCCCCCCE
Confidence            8877664443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.62  E-value=4.2e-15  Score=141.07  Aligned_cols=177  Identities=13%  Similarity=0.138  Sum_probs=128.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ..--+||+||||||+|.||..++++|+++|++|+.+.|+.++.+.+........               .......+..|
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D   70 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY---------------PGRFETAVVED   70 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS---------------TTTEEEEECSC
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc---------------cccccEEEecc
Confidence            334569999999999999999999999999999999999887665544322211               22345667889


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.+++.+++.       .+|+++|+++...     ...++   ...+..|+.|+.++++.+..    .+...++|++|
T Consensus        71 l~~~~~~~~~~~-------~~~~v~~~a~~~~-----~~~~~---~~~~~~nv~gt~~ll~~~~~----~~~v~~~i~~S  131 (342)
T d1y1pa1          71 MLKQGAYDEVIK-------GAAGVAHIASVVS-----FSNKY---DEVVTPAIGGTLNALRAAAA----TPSVKRFVLTS  131 (342)
T ss_dssp             TTSTTTTTTTTT-------TCSEEEECCCCCS-----CCSCH---HHHHHHHHHHHHHHHHHHHT----CTTCCEEEEEC
T ss_pred             ccchhhhhhhcc-------cchhhhhhccccc-----ccccc---cccccchhhhHHHHHHhhhc----ccccccccccc
Confidence            999887766543       6899999998643     12233   45567899998888777543    22456899998


Q ss_pred             CCCCCCCCCC------------------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccc
Q 016493          208 GAGSGGSSTP------------------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  257 (388)
Q Consensus       208 S~~~~~~~~~------------------------------~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T  257 (388)
                      |..+...+.+                              +...|+.||.+.+.+++.++++.. .++++.+++|+.+-.
T Consensus       132 S~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~G  210 (342)
T d1y1pa1         132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIG  210 (342)
T ss_dssp             CGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEEC
T ss_pred             cceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeC
Confidence            8632222111                              224699999999999998888765 468889999988866


Q ss_pred             cc
Q 016493          258 DL  259 (388)
Q Consensus       258 ~~  259 (388)
                      |.
T Consensus       211 p~  212 (342)
T d1y1pa1         211 TI  212 (342)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=1e-14  Score=140.79  Aligned_cols=177  Identities=12%  Similarity=0.099  Sum_probs=128.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH----------------HHHHHHHHHHHHHhhhhhhcCCCCcccc
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE----------------SVRMTVTELEENLKEGMMAAGGSSKKNL  116 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~----------------~l~~~~~~l~~~~~~~~~~~~~~~~~~~  116 (388)
                      |+.||||||+|.||.+++++|+++|++|+++|.-..                ...+........                
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   64 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL----------------   64 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH----------------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh----------------
Confidence            689999999999999999999999999999862111                111111111111                


Q ss_pred             cCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 016493          117 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  196 (388)
Q Consensus       117 ~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  196 (388)
                      .+.++.++++|++|.+.++++++..     ++|+++|.|+...  .+....+++.....+++|+.|+.++++++...   
T Consensus        65 ~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---  134 (393)
T d1i24a_          65 TGKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---  134 (393)
T ss_dssp             HCCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             cCCCcEEEEccCCCHHHHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHh---
Confidence            2357899999999999999998865     7999999998743  33445567778889999999999998887543   


Q ss_pred             CCCCcEEEEecCCCCCCC-----------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 016493          197 QPKGGHIFNMDGAGSGGS-----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG  253 (388)
Q Consensus       197 ~~~~g~Iv~isS~~~~~~-----------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG  253 (388)
                       +...++++.||......                       +..+...|+.||.+.+.+++.++++.   ++++.++.|+
T Consensus       135 -~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~  210 (393)
T d1i24a_         135 -GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG  210 (393)
T ss_dssp             -CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred             -ccccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccc
Confidence             22345666766422110                       11233469999999999998888776   6899999998


Q ss_pred             cccccc
Q 016493          254 MVLTDL  259 (388)
Q Consensus       254 ~v~T~~  259 (388)
                      .+-.|-
T Consensus       211 ~v~G~~  216 (393)
T d1i24a_         211 VVYGVK  216 (393)
T ss_dssp             EEECSC
T ss_pred             cccCCC
Confidence            887653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=1e-14  Score=138.08  Aligned_cols=169  Identities=15%  Similarity=0.121  Sum_probs=123.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      ||||||+|.||..++++|+++|++|++++|-..............                ...++.++++|++|.+.+.
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~~~l~   66 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALMT   66 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTCHHHHH
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh----------------cCCCCEEEEeecCCHHHHH
Confidence            999999999999999999999999999976322211111111111                1357889999999999998


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  215 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  215 (388)
                      ++++..     ++|++||.|+...     ...+.++.+..+++|+.|+.++++++...     +-.++|++||.. ...+
T Consensus        67 ~~~~~~-----~~d~ViHlAa~~~-----~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~-vy~~  130 (338)
T d1udca_          67 EILHDH-----AIDTVIHFAGLKA-----VGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSAT-VYGD  130 (338)
T ss_dssp             HHHHHT-----TCSEEEECCSCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGG-GGCS
T ss_pred             HHHhcc-----CCCEEEECCCccc-----hhhHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcce-EEcc
Confidence            887753     6999999998642     11223345688999999999999887654     235788888752 2211


Q ss_pred             ------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          216 ------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       216 ------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                                  ..+...|+.+|.+.+.+.+....+..  ++.+..++|+.+-.+
T Consensus       131 ~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~  183 (338)
T d1udca_         131 QPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGA  183 (338)
T ss_dssp             CCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST--TCEEEEEEECEEECC
T ss_pred             ccccccccccccCCCcchHHHHHhhhhHHHHHHHhhcc--CCeEEEEeeccEEec
Confidence                        12356799999999999887776653  678888888887765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=1.5e-14  Score=137.40  Aligned_cols=172  Identities=19%  Similarity=0.190  Sum_probs=121.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+||||||+|.||..++++|+++|++|+++++....-.+........                ...++.++.+|++|.++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~----------------~~~~v~~~~~Dl~d~~~   65 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL----------------TKHHIPFYEVDLCDRKG   65 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH----------------HTSCCCEEECCTTCHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh----------------cccCCeEEEeecCCHHH
Confidence            78999999999999999999999999999875322111111111111                13568889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      ++++.+..     ++|++||+|+...+     ....+..+....+|+.++.++.+++...     +..++|++||.....
T Consensus        66 l~~~~~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg  130 (347)
T d1z45a2          66 LEKVFKEY-----KIDSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYG  130 (347)
T ss_dssp             HHHHHHHS-----CCCEEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGC
T ss_pred             HHHHHhcc-----CCCEEEEccccccc-----cccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeec
Confidence            99887643     79999999997431     1122344677889999999999987543     234789988852110


Q ss_pred             --------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccc
Q 016493          214 --------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  257 (388)
Q Consensus       214 --------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T  257 (388)
                                    .+..+...|+.||.+.+.+++.+.+.. ..++.+..+.|+.+-.
T Consensus       131 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         131 DATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG  187 (347)
T ss_dssp             CGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred             CcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEe
Confidence                          111234579999999999988877543 3467777777766543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=2.8e-14  Score=134.35  Aligned_cols=177  Identities=13%  Similarity=0.070  Sum_probs=128.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-----HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-----SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~-----~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+||||||||.||.++++.|+++|++|+.++|...     +++.+......                .....+.++.+|+
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~Di   65 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN----------------VNKALMKLHYADL   65 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC------------------------CCEEEEECCT
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh----------------ccccceEEEEccc
Confidence            89999999999999999999999999999998532     22211111111                0235688999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++.+++++.++..     ++|++||.|+...     .....+.....+++|..+...+..++.....+.....+++..||
T Consensus        66 ~~~~~~~~~~~~~-----~~D~Vih~Aa~~~-----~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss  135 (339)
T d1n7ha_          66 TDASSLRRWIDVI-----KPDEVYNLAAQSH-----VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS  135 (339)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred             cCHHHHHHHHhhh-----ccchhhhcccccc-----ccccccCccccccccccccchhhhhhhhcccccccceeeeeccc
Confidence            9999999888754     7999999998743     12233455788899999999999888765544333445666655


Q ss_pred             CCC-CC--------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          209 AGS-GG--------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       209 ~~~-~~--------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ... +.        .+..+...|+.+|.+.+.+++..++..   ++.+..+.|+.|-.|.
T Consensus       136 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         136 SEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPR  192 (339)
T ss_dssp             GGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             ceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCC
Confidence            421 11        112345689999999999998888765   6899999998887664

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.55  E-value=1.7e-14  Score=136.55  Aligned_cols=185  Identities=15%  Similarity=0.072  Sum_probs=129.5

Q ss_pred             hhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEE
Q 016493           43 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  122 (388)
Q Consensus        43 ~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  122 (388)
                      ..+++.+....|++|||||+|.||.+++++|.++|++|+.++|....-......++......            ....+.
T Consensus         6 ~~~~~~~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~------------~~~~~~   73 (341)
T d1sb8a_           6 EELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------------QWSNFK   73 (341)
T ss_dssp             HHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------------HHTTEE
T ss_pred             HHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc------------ccCCee
Confidence            34455566678999999999999999999999999999999863221111112221111000            124688


Q ss_pred             EEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          123 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       123 ~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      ++.+|..|........       ...|.+++.+....     ...+.++....+++|+.|+.++++++...     +..+
T Consensus        74 ~~~~d~~d~~~~~~~~-------~~~~~v~~~~a~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~~~  136 (341)
T d1sb8a_          74 FIQGDIRNLDDCNNAC-------AGVDYVLHQAALGS-----VPRSINDPITSNATNIDGFLNMLIAARDA-----KVQS  136 (341)
T ss_dssp             EEECCTTSHHHHHHHH-------TTCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSE
T ss_pred             EEeecccccccccccc-------cccccccccccccc-----ccccccCccchhheeehhHHHHHHHHHhc-----CCce
Confidence            8999999988765433       26788888886532     12245667889999999999998887542     3458


Q ss_pred             EEEecCCCCCC----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          203 IFNMDGAGSGG----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       203 Iv~isS~~~~~----------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +|++||.....          .+..+...|+.||.+.+.+++.+++..   ++++..+.|+.|-.+.
T Consensus       137 ~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         137 FTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             EEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred             EEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence            99998863111          112234789999999999999888776   5788889998877654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.4e-14  Score=133.57  Aligned_cols=174  Identities=14%  Similarity=0.037  Sum_probs=123.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-----HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      |+||||||+|.||.+++++|+++|++|+.++|....     ++.+......                ....++.++.+|+
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~Dl   65 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA----------------HIEGNMKLHYGDL   65 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-------------------------CEEEEECCT
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh----------------hccCCcEEEEeec
Confidence            455999999999999999999999999999996431     2211111111                1235789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +|.+.+.++++..     .+|++++.++...     .....+.....+++|+.|+.++++++...-..  +..++|++||
T Consensus        66 ~d~~~~~~~~~~~-----~~~~v~~~~a~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~~~~i~~SS  133 (347)
T d1t2aa_          66 TDSTCLVKIINEV-----KPTEIYNLGAQSH-----VKISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQAST  133 (347)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred             CCchhhHHHHhhc-----ccceeeeeeeccc-----cchhhccchhhhhhHHHHHHHHHHHHHHcCCC--CCcEEEEecc
Confidence            9999999988765     6889999987643     12233445667899999999998887554222  2357999987


Q ss_pred             CCC-CC---------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          209 AGS-GG---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       209 ~~~-~~---------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      ... +.         .+..+...|+.||.+.+.+++..++.+   ++.+..+.|+.+-.|
T Consensus       134 ~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         134 SELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  190 (347)
T ss_dssp             GGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             hheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence            621 11         011234579999999999998887775   678888888777665

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.50  E-value=1.7e-13  Score=129.70  Aligned_cols=176  Identities=16%  Similarity=0.082  Sum_probs=129.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++||+||||||+|.||.+++++|+++|++|+.++|+..+.....+..+                  ....+.++.+|++|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~i~~~~~Dl~d   67 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------------------VADGMQSEIGDIRD   67 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT------------------TTTTSEEEECCTTC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh------------------cccCCeEEEeeccC
Confidence            478999999999999999999999999999999998765433322211                  12468899999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      ++.+.++.+..     .+|+++|.|+...     ...+.+..+..+++|+.++.++++++...    +....++..||..
T Consensus        68 ~~~l~~~~~~~-----~~~~v~~~aa~~~-----~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~----~~~~~~~~~s~~~  133 (356)
T d1rkxa_          68 QNKLLESIREF-----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDK  133 (356)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGG
T ss_pred             hHhhhhhhhhc-----hhhhhhhhhcccc-----ccccccCCccccccccccchhhhhhhhcc----ccccccccccccc
Confidence            99999888765     7899999998643     12234456778999999999998887543    1234555555442


Q ss_pred             CCCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCC------CCeEEEEEecCccccc
Q 016493          211 SGGS-----------STPLTAVYGSTKCGLRQLQASLFKESKR------SKVGVHTASPGMVLTD  258 (388)
Q Consensus       211 ~~~~-----------~~~~~~~Y~aSK~al~~l~~~la~el~~------~gI~vn~v~PG~v~T~  258 (388)
                      ....           +..+...|+.+|...+.+.+..+.++..      .++.+..+.|+.+-.|
T Consensus       134 ~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp  198 (356)
T d1rkxa_         134 CYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG  198 (356)
T ss_dssp             GBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred             cccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence            2211           1123456999999999999988877642      4688889998877654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.48  E-value=1.5e-13  Score=128.44  Aligned_cols=172  Identities=15%  Similarity=-0.002  Sum_probs=123.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+||||||+|.||++++++|+++|++|+.++|......  ...+....               ...++.++.+|++|.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~---------------~~~~~~~~~~Dl~d~~~   63 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELG---------------IEGDIQYEDGDMADACS   63 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTT---------------CGGGEEEEECCTTCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhc---------------ccCCcEEEEccccChHH
Confidence            78999999999999999999999999999998653211  01111110               23568999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG-  212 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~-  212 (388)
                      +.+.+...     ..++++++|+...  ..   ...+.....+++|+.|+.++++++...    +...++++.||.... 
T Consensus        64 ~~~~~~~~-----~~~~~~~~a~~~~--~~---~~~~~~~~~~~~n~~g~~~~l~~~~~~----~~~~~~i~~Ss~~~~~  129 (321)
T d1rpna_          64 VQRAVIKA-----QPQEVYNLAAQSF--VG---ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFG  129 (321)
T ss_dssp             HHHHHHHH-----CCSEEEECCSCCC--HH---HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGC
T ss_pred             hhhhhccc-----ccccccccccccc--cc---ccccchHHHHhhhhhchHHHHHHHHHh----CCCcccccccchhhcC
Confidence            98888765     6788888887643  11   111234678899999999998877553    233467777764211 


Q ss_pred             C---------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          213 G---------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       213 ~---------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .         .+..+...|+.+|.+.+.+++..+.+.   ++.+..+.|+.+..|.
T Consensus       130 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         130 LIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL  182 (321)
T ss_dssp             SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             cccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCC
Confidence            1         111245689999999999999888776   5788888887766654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.48  E-value=1.2e-13  Score=131.93  Aligned_cols=176  Identities=13%  Similarity=0.145  Sum_probs=124.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .||||||+|.||.+++++|+++|++|++. ++......  ...+..               .....++.++++|++|.+.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~---------------~~~~~~~~~~~~Dl~d~~~   64 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSD---------------ISESNRYNFEHADICDSAE   64 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTT---------------TTTCTTEEEEECCTTCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHh---------------hhhcCCcEEEEccCCCHHH
Confidence            48999999999999999999999986554 43211100  000000               0023578999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC----CCCcEEEEecCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ----PKGGHIFNMDGA  209 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~~~g~Iv~isS~  209 (388)
                      ++++++..     ++|++||+|+...+     ..+.++....+++|+.|+.++.+.+...-...    .+..++|++||.
T Consensus        65 l~~~~~~~-----~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~  134 (361)
T d1kewa_          65 ITRIFEQY-----QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD  134 (361)
T ss_dssp             HHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG
T ss_pred             HHHHHHhC-----CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccc
Confidence            99888754     79999999986431     11233446789999999999999988765432    123579999885


Q ss_pred             CCCC--------------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          210 GSGG--------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       210 ~~~~--------------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      ....                    .+..+...|+.||.+.+.+++..+..+   |+.+..+.|+.|-.|..
T Consensus       135 ~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~  202 (361)
T d1kewa_         135 EVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             GGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             eeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCC
Confidence            2110                    011234569999999999999988776   68889999988877643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=5.3e-13  Score=124.31  Aligned_cols=152  Identities=15%  Similarity=0.123  Sum_probs=115.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|.||||||+|.||.+++++|+++|+.|+++++..                                     ++|+.|.+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------------------~~~~~~~~   44 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------------------ELNLLDSR   44 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------------------TCCTTCHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------------------hccccCHH
Confidence            36799999999999999999999999988765421                                     25899999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                      .++++++.-     .+|.++|+|+....    ......+..+.+++|+.++.++++++...     +-.++|++||.. .
T Consensus        45 ~~~~~~~~~-----~~d~v~~~a~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~-v  109 (315)
T d1e6ua_          45 AVHDFFASE-----RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSC-I  109 (315)
T ss_dssp             HHHHHHHHH-----CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGG-G
T ss_pred             HHHHHHhhc-----CCCEEEEcchhccc----cccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCce-E
Confidence            988877643     69999999976431    11223445667889999999998877442     345799999863 2


Q ss_pred             CCC----------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          213 GSS----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       213 ~~~----------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +.+                .+....|+.||.+.+.+++.+.++.   |+++..+.|+.|-.|.
T Consensus       110 yg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         110 YPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred             cCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence            211                1123469999999999999998877   6999999999887663

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.2e-13  Score=123.85  Aligned_cols=197  Identities=18%  Similarity=0.144  Sum_probs=129.9

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ++.+++++|+||||||||.||.+++++|+++|.  +|++.+|++.+...                       .....+..
T Consensus         7 ~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-----------------------~~~~~i~~   63 (232)
T d2bkaa1           7 REDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----------------------EAYKNVNQ   63 (232)
T ss_dssp             HHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----------------------GGGGGCEE
T ss_pred             HHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-----------------------cccceeee
Confidence            344556789999999999999999999999995  89999997643211                       01245666


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  203 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  203 (388)
                      ..+|+.+.+++.+       .+...|++||++|...        .........++|+.++..+.+.+..    . +-.++
T Consensus        64 ~~~D~~~~~~~~~-------~~~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~f  123 (232)
T d2bkaa1          64 EVVDFEKLDDYAS-------AFQGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKA----G-GCKHF  123 (232)
T ss_dssp             EECCGGGGGGGGG-------GGSSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHH----T-TCCEE
T ss_pred             eeecccccccccc-------cccccccccccccccc--------cccchhhhhhhcccccceeeecccc----c-Ccccc
Confidence            7788887665543       3346899999998632        2334566778899999998887743    3 35679


Q ss_pred             EEecCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccccccccCccch---------hhhhhh
Q 016493          204 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLLLSGSTIQ---------NKQMFN  273 (388)
Q Consensus       204 v~isS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI-~vn~v~PG~v~T~~~~~~~~~~---------~~~~~~  273 (388)
                      |++|+...   .......|+.+|...+...+    ++   +. ++..+.||.+-.+.........         ......
T Consensus       124 i~~Ss~~~---~~~~~~~Y~~~K~~~E~~l~----~~---~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~  193 (232)
T d2bkaa1         124 NLLSSKGA---DKSSNFLYLQVKGEVEAKVE----EL---KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWAS  193 (232)
T ss_dssp             EEECCTTC---CTTCSSHHHHHHHHHHHHHH----TT---CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGG
T ss_pred             ccCCcccc---ccCccchhHHHHHHhhhccc----cc---cccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccC
Confidence            99987632   22334679999987765443    22   33 5778999999776432211100         000111


Q ss_pred             hhccCHHHHHHHHhhhhhhccc
Q 016493          274 IICELPETVARTLVPRIRVVKG  295 (388)
Q Consensus       274 ~~~~~pe~vA~~~l~~~~~~~~  295 (388)
                      ....+.+++|+.++..+..+.+
T Consensus       194 ~~~I~~~dvA~a~i~~~~~~~~  215 (232)
T d2bkaa1         194 GHSVPVVTVVRAMLNNVVRPRD  215 (232)
T ss_dssp             GTEEEHHHHHHHHHHHHTSCCC
T ss_pred             CCeEEHHHHHHHHHHHHhcCcc
Confidence            1123468888888877655544

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=5.1e-13  Score=126.32  Aligned_cols=172  Identities=17%  Similarity=0.104  Sum_probs=120.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC------ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASR------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      |+||||||+|.||.+++++|+++|++|+.++|      +.....+..+.+...                ...++.++++|
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   66 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL----------------TGRSVEFEEMD   66 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH----------------HTCCCEEEECC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh----------------cCCCcEEEEee
Confidence            68899999999999999999999999999864      221111222222221                23578999999


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++|.++++++....     .+|+++|.|+....     ..+.++....+++|+.++.++++++..    . +-.++++.|
T Consensus        67 l~d~~~l~~~~~~~-----~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~-~v~~~i~~s  131 (346)
T d1ek6a_          67 ILDQGALQRLFKKY-----SFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKA----H-GVKNLVFSS  131 (346)
T ss_dssp             TTCHHHHHHHHHHC-----CEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEE
T ss_pred             cccccccccccccc-----ccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhh----c-Ccccccccc
Confidence            99999998877653     68899999997431     122333467889999999988877643    3 345788887


Q ss_pred             CCCCCCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          208 GAGSGGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       208 S~~~~~~~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                      |+......           ......|+.+|...+...+.+++..  .++....+.|+.+-.+
T Consensus       132 s~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         132 SATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             EGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECC
T ss_pred             cceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceecc
Confidence            65221111           1233569999999988887766533  3677888888776654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.44  E-value=1.4e-12  Score=121.92  Aligned_cols=155  Identities=17%  Similarity=0.105  Sum_probs=109.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .||||||+|.||..++++|+++|++|+++++-. ....+....+.                  ...++.++.+|++|.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~------------------~~~~~~~i~~Di~~~~~   63 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS------------------SLGNFEFVHGDIRNKND   63 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH------------------TTCCCEEEECCTTCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh------------------ccCCcEEEEcccCCHHH
Confidence            489999999999999999999999999987421 11111112221                  13568899999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +.++++..     ++|++||+|+....     ....++.+..+++|+.|+.++++++...    +....|++.|+.....
T Consensus        64 l~~~~~~~-----~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~  129 (338)
T d1orra_          64 VTRLITKY-----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYG  129 (338)
T ss_dssp             HHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGT
T ss_pred             HHHHHHhc-----CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhcc----cccccccccccccccc
Confidence            99988766     68999999987431     1223345788999999999999876553    1223455554431111


Q ss_pred             C--------------------------CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 016493          214 S--------------------------STPLTAVYGSTKCGLRQLQASLFKESK  241 (388)
Q Consensus       214 ~--------------------------~~~~~~~Y~aSK~al~~l~~~la~el~  241 (388)
                      .                          ...+...|+.+|...+.+.......+.
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         130 DLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             TCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence            1                          112346799999999999888888774

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.43  E-value=9.1e-13  Score=125.34  Aligned_cols=172  Identities=15%  Similarity=0.059  Sum_probs=124.4

Q ss_pred             hcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           46 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        46 ~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      +++.+.++..||||||+|.||.+++++|.++|++|++++|....-.                       ........+..
T Consensus         8 ~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-----------------------~~~~~~~~~~~   64 (363)
T d2c5aa1           8 EQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-----------------------TEDMFCDEFHL   64 (363)
T ss_dssp             CCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-----------------------CGGGTCSEEEE
T ss_pred             cCcCCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-----------------------hhhcccCcEEE
Confidence            3444556778999999999999999999999999999987543210                       00113456778


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  205 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  205 (388)
                      +|+.+.+++.++.+       .+|.+||.|+.... .   ....+.....+.+|+.++.+++.++...     +..++|+
T Consensus        65 ~D~~~~~~~~~~~~-------~~d~Vih~a~~~~~-~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~~i~  128 (363)
T d2c5aa1          65 VDLRVMENCLKVTE-------GVDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFY  128 (363)
T ss_dssp             CCTTSHHHHHHHHT-------TCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEE
T ss_pred             eechhHHHHHHHhh-------cCCeEeeccccccc-c---cccccccccccccccchhhHHHHhHHhh-----Ccccccc
Confidence            89999887766543       68999999987541 1   1122345678889999999988886543     3457999


Q ss_pred             ecCCCCCCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          206 MDGAGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       206 isS~~~~~~-----------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +||......                 +..+...|+.||.+.+.+++...++.   |+++..+.|+.+-.+.
T Consensus       129 ~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         129 ASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             EEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             ccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence            988632111                 11234579999999999999888776   6899999998887663

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.41  E-value=2.2e-12  Score=114.15  Aligned_cols=202  Identities=12%  Similarity=0.103  Sum_probs=124.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCe--EEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDR--VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~--Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      -++||||||+|+||++++++|+++|++  |+...|++++.+.                        ...++.++.+|+++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~------------------------~~~~~~~~~~d~~~   58 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK------------------------IGGEADVFIGDITD   58 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH------------------------TTCCTTEEECCTTS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh------------------------ccCCcEEEEeeecc
Confidence            489999999999999999999999965  6667888765432                        12457789999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCC--------cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  202 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  202 (388)
                      .+++.++++       .+|.+||+|+......+        ..............+|+.+...+.......     ..+.
T Consensus        59 ~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  126 (252)
T d2q46a1          59 ADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKH  126 (252)
T ss_dssp             HHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSE
T ss_pred             ccccccccc-------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-----cccc
Confidence            998877654       68999999987431111        011112234566788999988887766544     3456


Q ss_pred             EEEecCCCCCCCCCCCchhhHHHH-HHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCccc--hhhh--hhhhhcc
Q 016493          203 IFNMDGAGSGGSSTPLTAVYGSTK-CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQ--MFNIICE  277 (388)
Q Consensus       203 Iv~isS~~~~~~~~~~~~~Y~aSK-~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~--~~~~~~~  277 (388)
                      ....++. ....+......|..++ .......+.+..   ..|+++..++||.+-.+........  ....  .......
T Consensus       127 ~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i  202 (252)
T d2q46a1         127 IVVVGSM-GGTNPDHPLNKLGNGNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTV  202 (252)
T ss_dssp             EEEEEET-TTTCTTCGGGGGGGCCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEE
T ss_pred             ccccccc-ccCCCCcccccccccchhhhhhhhhhhhh---cccccceeecceEEECCCcchhhhhhccCcccccCCCCeE
Confidence            6777665 2333332222222222 222222222222   3478999999999876643221110  0000  1111123


Q ss_pred             CHHHHHHHHhhhhhhcc
Q 016493          278 LPETVARTLVPRIRVVK  294 (388)
Q Consensus       278 ~pe~vA~~~l~~~~~~~  294 (388)
                      ..+++|+.++..+..++
T Consensus       203 ~~~Dva~a~~~~l~~~~  219 (252)
T d2q46a1         203 PRADVAEVCIQALLFEE  219 (252)
T ss_dssp             EHHHHHHHHHHHTTCGG
T ss_pred             EHHHHHHHHHHHhCCcc
Confidence            57899998887776554

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.41  E-value=2.5e-13  Score=128.60  Aligned_cols=170  Identities=14%  Similarity=0.160  Sum_probs=117.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .|.||||||||-||..++++|+++|++|.+++++.-.-......+                ......++.++.+|++|.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----------------~~~~~~~i~~~~~Di~d~~   65 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----------------EAILGDRVELVVGDIADAE   65 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----------------GGGCSSSEEEEECCTTCHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----------------HHhhcCCeEEEEccCCCHH
Confidence            478999999999999999999999987655544310000000000                0113467899999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC-C
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG-S  211 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~-~  211 (388)
                      .+..+..       ..|.++|.|+....     ....++.+..+++|+.|+.+++..+...      +.+++++||.. .
T Consensus        66 ~~~~~~~-------~~~~v~~~a~~~~~-----~~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vy  127 (346)
T d1oc2a_          66 LVDKLAA-------KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVY  127 (346)
T ss_dssp             HHHHHHT-------TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGG
T ss_pred             HHHHHHh-------hhhhhhhhhhcccc-----cchhhCcccceeeehHhHHhhhhhhccc------cccccccccceEe
Confidence            8877654       57889999987541     1122334678899999999998877543      23566665541 1


Q ss_pred             CCC---------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          212 GGS---------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       212 ~~~---------------------~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      +..                     +..+...|+.+|.+.+.+++...++.   |+++.++.|+.|-.|.
T Consensus       128 g~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         128 GDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPY  193 (346)
T ss_dssp             CCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTT
T ss_pred             cccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCC
Confidence            111                     11123569999999999999888776   7999999999887763

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=1.2e-12  Score=123.52  Aligned_cols=163  Identities=12%  Similarity=0.057  Sum_probs=117.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +||||||+|.||..++++|+++| ++|+.+++.........                      ...++.++++|+++.++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----------------------~~~~~~~i~~Di~~~~~   59 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDISIHSE   59 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------------------TCTTEEEEECCTTTCSH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----------------------cCCCeEEEECccCChHH
Confidence            48999999999999999999999 58999888654322110                      23578999999998877


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC-C
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-G  212 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~-~  212 (388)
                      +.+.+.   +   ++|++||+|+....     ....+.....+++|+.|+.++++.+..    .  +-+.++.||... +
T Consensus        60 ~~~~~~---~---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~~~~~----~--~~~~~~~ss~~~~~  122 (342)
T d2blla1          60 WIEYHV---K---KCDVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYG  122 (342)
T ss_dssp             HHHHHH---H---HCSEEEECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGB
T ss_pred             HHHHHH---h---CCCccccccccccc-----cccccCCcccccccccccccccccccc----c--cccccccccccccc
Confidence            655332   1   48999999997541     112233467899999999999888643    2  235566665421 1


Q ss_pred             CCC----------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          213 GSS----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       213 ~~~----------------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ...                ..+...|+.||.+.+.+++..++..   |+.+..+.|+.+-.+.
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~  182 (342)
T d2blla1         123 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPR  182 (342)
T ss_dssp             TCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSS
T ss_pred             cccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeecccccccc
Confidence            100                1233679999999999999888876   6888888888887663

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=5.7e-13  Score=124.57  Aligned_cols=162  Identities=20%  Similarity=0.223  Sum_probs=111.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      |.||||||+|-||++++++|+++|++|++++|.... .+.. ...                  ....++.....|+.+. 
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~------------------~~~~~~d~~~~~~~~~-   61 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHW------------------IGHENFELINHDVVEP-   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGG------------------TTCTTEEEEECCTTSC-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHh------------------cCCCceEEEehHHHHH-
Confidence            789999999999999999999999999999863221 1110 000                  0123455555555432 


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                                 .+.++|++||+|+....  +...   ++.++.+++|+.++.++++++...      +.++|++||....
T Consensus        62 -----------~~~~~d~VihlAa~~~~--~~~~---~~~~~~~~~Nv~g~~~ll~~~~~~------~~k~I~~SS~~vy  119 (312)
T d2b69a1          62 -----------LYIEVDQIYHLASPASP--PNYM---YNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVY  119 (312)
T ss_dssp             -----------CCCCCSEEEECCSCCSH--HHHT---TCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGG
T ss_pred             -----------HHcCCCEEEECcccCCc--hhHH---hCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEEChhee
Confidence                       22369999999987431  1111   234567899999999998876432      2378888875211


Q ss_pred             C---------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          213 G---------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       213 ~---------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      .               .+..+...|+.||.+.+.+++..++++   |+.+..++|+.|-.|..
T Consensus       120 ~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         120 GDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             BSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             cCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCC
Confidence            0               011245679999999999999988876   68999999999987643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.36  E-value=9.5e-12  Score=119.18  Aligned_cols=180  Identities=14%  Similarity=0.073  Sum_probs=122.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHH-CCCeEEEEeC---------ChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE
Q 016493           55 NVVITGSTRGLGKALAREFLL-SGDRVVVASR---------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  124 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~-~G~~Vil~~R---------~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  124 (388)
                      .||||||+|.||..++++|++ .|++|+++++         ..+..+.....+.....         .........+.++
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~   74 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDG---------PKPPWADRYAALE   74 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCS---------SCCTTTTCCCEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhcc---------ccccccccceEEE
Confidence            589999999999999999986 7899999874         12223333333222110         0111123467889


Q ss_pred             EccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 016493          125 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  204 (388)
Q Consensus       125 ~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  204 (388)
                      .+|++|.+.++++++..    .++|+++|.|+....     ....+.....+++|+.++.++++++...     +..+++
T Consensus        75 ~~Di~d~~~l~~~~~~~----~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~~  140 (383)
T d1gy8a_          75 VGDVRNEDFLNGVFTRH----GPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKII  140 (383)
T ss_dssp             ESCTTCHHHHHHHHHHS----CCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEE
T ss_pred             ECcccCHHHhhhhhhcc----ceeehhhcccccccc-----cccccccccccccccccccccchhhhcc-----CCcccc
Confidence            99999999988877643    579999999987441     1223445678889999999998877542     234566


Q ss_pred             EecCCCCCC-----------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccccc
Q 016493          205 NMDGAGSGG-----------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  260 (388)
Q Consensus       205 ~isS~~~~~-----------------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~  260 (388)
                      +.++.....                 .+..+...|+.+|.+.+.+++.+...+   |+.+.++.|+.+-.|..
T Consensus       141 ~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         141 FSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (383)
T ss_dssp             EEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             cccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCc
Confidence            665432111                 011234679999999999998887766   68999999988866543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.27  E-value=5.2e-12  Score=118.14  Aligned_cols=167  Identities=12%  Similarity=0.107  Sum_probs=117.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEE------EeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVV------ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil------~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .||||||+|.||.+++++|+++|++|..      .++.......  ..+..               .....++.++..|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~---------------~~~~~~~~~~~~d~   64 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAP---------------VDADPRLRFVHGDI   64 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGG---------------GTTCTTEEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhh---------------hhcCCCeEEEEecc
Confidence            4899999999999999999999976543      3321100000  00000               00235789999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      ++........       ...|.++|.|+...     .....+..+..+++|+.++.++++++..    . +..++|++||
T Consensus        65 ~~~~~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~N~~gt~~ll~~~~~----~-~~~~~I~~Ss  127 (322)
T d1r6da_          65 RDAGLLAREL-------RGVDAIVHFAAESH-----VDRSIAGASVFTETNVQGTQTLLQCAVD----A-GVGRVVHVST  127 (322)
T ss_dssp             TCHHHHHHHT-------TTCCEEEECCSCCC-----HHHHHHCCHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEEEE
T ss_pred             ccchhhhccc-------cccceEEeeccccc-----ccccccchHHHhhhhHHHHHHHHHHHHH----c-CCceEEEeec
Confidence            9988766432       37899999998743     1223344577889999999999888753    2 3467999987


Q ss_pred             CCCCCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          209 AGSGGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       209 ~~~~~~~-----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      .. ....           ..+...|+.||.+.+.+++.++++.   |+.+..+.|+.|-.|.
T Consensus       128 ~~-~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~  185 (322)
T d1r6da_         128 NQ-VYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPY  185 (322)
T ss_dssp             GG-GGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred             ce-eecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcC
Confidence            62 2211           1234679999999999999998876   6899999999987764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.17  E-value=2.1e-10  Score=105.34  Aligned_cols=197  Identities=12%  Similarity=0.055  Sum_probs=113.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      ++||||||+|.||++++++|+++|++|+++.|+.........+.....               ....+.++++|+.|.++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~---------------~~~~v~~v~~d~~d~~~   68 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF---------------KQLGAKLIEASLDDHQR   68 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH---------------HTTTCEEECCCSSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh---------------ccCCcEEEEeecccchh
Confidence            459999999999999999999999999999997543221111111111               12457889999999988


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  213 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  213 (388)
                      +.+.++       ..+.++++++....                ..|..+...++.++.    +. ...+.++.||.+...
T Consensus        69 ~~~~~~-------~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a~----~~-~~~~~v~~Ss~g~~~  120 (312)
T d1qyda_          69 LVDALK-------QVDVVISALAGGVL----------------SHHILEQLKLVEAIK----EA-GNIKRFLPSEFGMDP  120 (312)
T ss_dssp             HHHHHT-------TCSEEEECCCCSSS----------------STTTTTHHHHHHHHH----HS-CCCSEEECSCCSSCT
T ss_pred             hhhhcc-------Ccchhhhhhhhccc----------------ccchhhhhHHHHHHH----Hh-cCCcEEEEeeccccC
Confidence            776554       67889988875321                123444444444432    22 234566666652222


Q ss_pred             CCC----CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc-------chh------hhhhhhhc
Q 016493          214 SST----PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST-------IQN------KQMFNIIC  276 (388)
Q Consensus       214 ~~~----~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~------~~~~~~~~  276 (388)
                      ...    .....|..+|.....    ...   ..++....++||.+..+.......       ...      ..-.....
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  193 (312)
T d1qyda_         121 DIMEHALQPGSITFIDKRKVRR----AIE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIW  193 (312)
T ss_dssp             TSCCCCCSSTTHHHHHHHHHHH----HHH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEE
T ss_pred             CCcccccchhhhhhHHHHHHHH----hhc---ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccce
Confidence            111    222334444443332    222   236777888888875432211000       000      00011122


Q ss_pred             cCHHHHHHHHhhhhhhccccccce
Q 016493          277 ELPETVARTLVPRIRVVKGSGKAI  300 (388)
Q Consensus       277 ~~pe~vA~~~l~~~~~~~~~~~~~  300 (388)
                      ...+++|+.++..+..++...+..
T Consensus       194 i~v~Dva~a~~~~l~~~~~~~~~~  217 (312)
T d1qyda_         194 VDEDDVGTYTIKSIDDPQTLNKTM  217 (312)
T ss_dssp             ECHHHHHHHHHHHTTCGGGSSSEE
T ss_pred             eeHHHHHHHHHHHhcCccccCceE
Confidence            468899999988887766544443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.07  E-value=3.4e-10  Score=99.10  Aligned_cols=182  Identities=17%  Similarity=0.145  Sum_probs=112.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|+++||||||.||++++++|+++|+  +|+...|++..                           ...+   +..+..|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------------------------~~~~---~~~~~~d   51 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------------------------EHPR---LDNPVGP   51 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------------------------CCTT---EECCBSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------------------------hccc---ccccccc
Confidence            58999999999999999999999997  67777775421                           0122   3445555


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      ..++..      ...+.+|.+|+++|....    .   ...-+...++|+.++.++++.+..    . +..+++++||..
T Consensus        52 ~~~~~~------~~~~~~d~vi~~~g~~~~----~---~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~~i~~Ss~~  113 (212)
T d2a35a1          52 LAELLP------QLDGSIDTAFCCLGTTIK----E---AGSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSALG  113 (212)
T ss_dssp             HHHHGG------GCCSCCSEEEECCCCCHH----H---HSSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTT
T ss_pred             hhhhhh------ccccchheeeeeeeeecc----c---cccccccccchhhhhhhccccccc----c-cccccccccccc
Confidence            443322      223568999999987421    1   112256788899999888887633    3 456899998763


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccccccccCccch-----hhhh-hhhhccCHHHHH
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLLLSGSTIQ-----NKQM-FNIICELPETVA  283 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI-~vn~v~PG~v~T~~~~~~~~~~-----~~~~-~~~~~~~pe~vA  283 (388)
                      +.   ......|..+|...+...+       ..+. +.+.+.|+.|-.+.........     .... ........+++|
T Consensus       114 ~~---~~~~~~y~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA  183 (212)
T d2a35a1         114 AD---AKSSIFYNRVKGELEQALQ-------EQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLA  183 (212)
T ss_dssp             CC---TTCSSHHHHHHHHHHHHHT-------TSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHH
T ss_pred             cc---cccccchhHHHHHHhhhcc-------ccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHH
Confidence            22   2345679999987665432       2333 6778999998665322110000     0000 011113467888


Q ss_pred             HHHhhhhhh
Q 016493          284 RTLVPRIRV  292 (388)
Q Consensus       284 ~~~l~~~~~  292 (388)
                      +.++..+..
T Consensus       184 ~ai~~~~~~  192 (212)
T d2a35a1         184 RALWRLALE  192 (212)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHcC
Confidence            887766643

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.98  E-value=9.5e-09  Score=93.17  Aligned_cols=194  Identities=11%  Similarity=0.093  Sum_probs=111.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH--HHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT--VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|+||||||||.||.+++++|+++|++|++++|+.......  ...+...                ....+.++.+|+.+
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~d~~~   66 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF----------------KASGANIVHGSIDD   66 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH----------------HTTTCEEECCCTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh----------------ccCCcEEEEeeccc
Confidence            47799999999999999999999999999999976543221  1122111                12457788999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  210 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  210 (388)
                      ..+..+.++       ..|.++++++...                    ..+...+.+++...     ...++++.||..
T Consensus        67 ~~~~~~~~~-------~~~~vi~~~~~~~--------------------~~~~~~~~~a~~~~-----~~~~~~~~s~~~  114 (307)
T d1qyca_          67 HASLVEAVK-------NVDVVISTVGSLQ--------------------IESQVNIIKAIKEV-----GTVKRFFPSEFG  114 (307)
T ss_dssp             HHHHHHHHH-------TCSEEEECCCGGG--------------------SGGGHHHHHHHHHH-----CCCSEEECSCCS
T ss_pred             chhhhhhhh-------hceeeeecccccc--------------------cchhhHHHHHHHHh-----ccccceeeeccc
Confidence            988776654       5789999887532                    12222333333222     234566666652


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccccccCcc----c-h-------hhhhhhhhccC
Q 016493          211 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST----I-Q-------NKQMFNIICEL  278 (388)
Q Consensus       211 ~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~~~~~~~----~-~-------~~~~~~~~~~~  278 (388)
                      . .........+...+.......+....+   .++....+.|+.+-.+.......    . .       ...........
T Consensus       115 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  190 (307)
T d1qyca_         115 N-DVDNVHAVEPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVK  190 (307)
T ss_dssp             S-CTTSCCCCTTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEEC
T ss_pred             c-ccccccccccccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCc
Confidence            2 222222223333333332233333333   36777888998876543211000    0 0       00001111236


Q ss_pred             HHHHHHHHhhhhhhcccccc
Q 016493          279 PETVARTLVPRIRVVKGSGK  298 (388)
Q Consensus       279 pe~vA~~~l~~~~~~~~~~~  298 (388)
                      .+++|+.++..+..++...+
T Consensus       191 v~Dva~~~~~~l~~~~~~~~  210 (307)
T d1qyca_         191 EEDIGTFTIKAVDDPRTLNK  210 (307)
T ss_dssp             HHHHHHHHHTTSSCGGGTTE
T ss_pred             HHHHHHHHHHHhcChhhcCc
Confidence            88999999887766654443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.97  E-value=3e-14  Score=123.06  Aligned_cols=46  Identities=33%  Similarity=0.433  Sum_probs=41.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL  101 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~  101 (388)
                      +.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++....
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            5677888999999999999999999999999999999999887653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.97  E-value=2.5e-09  Score=96.83  Aligned_cols=142  Identities=18%  Similarity=0.184  Sum_probs=100.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      ||||||||.||.+++++|.++|++|+..+|++                                      +|++|.++++
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------------------~D~~d~~~~~   45 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------------------LDITNVLAVN   45 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------------------CCTTCHHHHH
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------------------ccCCCHHHHH
Confidence            89999999999999999999999999998741                                      4899999999


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--
Q 016493          136 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG--  213 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~--  213 (388)
                      ++++..     ++|++||+|+....     +......+..+..|......+.......      ...+++.||.....  
T Consensus        46 ~~l~~~-----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~  109 (281)
T d1vl0a_          46 KFFNEK-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGE  109 (281)
T ss_dssp             HHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSC
T ss_pred             HHHHHc-----CCCEEEeecccccc-----ccccccchhhcccccccccccccccccc------cccccccccceeeecc
Confidence            888765     78999999987431     1223334667788888887776665442      23455555431111  


Q ss_pred             --------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccccc
Q 016493          214 --------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  258 (388)
Q Consensus       214 --------~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~  258 (388)
                              .+..+...|+.+|...+.+.+    +.   +.+...+.|+.+-.+
T Consensus       110 ~~~~~~e~~~~~~~~~~~~~k~~~e~~~~----~~---~~~~~i~R~~~vyG~  155 (281)
T d1vl0a_         110 AKEPITEFDEVNPQSAYGKTKLEGENFVK----AL---NPKYYIVRTAWLYGD  155 (281)
T ss_dssp             CSSCBCTTSCCCCCSHHHHHHHHHHHHHH----HH---CSSEEEEEECSEESS
T ss_pred             ccccccccccccchhhhhhhhhHHHHHHH----Hh---CCCccccceeEEeCC
Confidence                    112345679999987666553    22   456677899888655

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.94  E-value=8.2e-10  Score=100.65  Aligned_cols=129  Identities=19%  Similarity=0.198  Sum_probs=89.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      .||||||+|-||.+++++|.++|+.|++ +++...                                  +..|++|.+.+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~----------------------------------~~~Dl~~~~~~   46 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE----------------------------------FCGDFSNPKGV   46 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS----------------------------------SCCCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc----------------------------------ccCcCCCHHHH
Confidence            3899999999999999999999865544 443210                                  34699999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 016493          135 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  214 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  214 (388)
                      +++++..     ++|++||+||...+ . ...   +.-+..+++|+.+...+.+++.    +  .+.+++++||......
T Consensus        47 ~~~i~~~-----~~D~Vih~Aa~~~~-~-~~~---~~~~~~~~~n~~~~~~l~~~~~----~--~~~~~~~~ss~~~~~~  110 (298)
T d1n2sa_          47 AETVRKL-----RPDVIVNAAAHTAV-D-KAE---SEPELAQLLNATSVEAIAKAAN----E--TGAWVVHYSTDYVFPG  110 (298)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-H-HHT---TCHHHHHHHHTHHHHHHHHHHT----T--TTCEEEEEEEGGGSCC
T ss_pred             HHHHHHc-----CCCEEEEecccccc-c-ccc---cCccccccccccccccchhhhh----c--cccccccccccccccC
Confidence            9888765     79999999997541 1 112   2235778999999988887763    2  2456777776522111


Q ss_pred             ----------CCCCchhhHHHHHHHHHHHH
Q 016493          215 ----------STPLTAVYGSTKCGLRQLQA  234 (388)
Q Consensus       215 ----------~~~~~~~Y~aSK~al~~l~~  234 (388)
                                +..+...|+.+|.+.+.+.+
T Consensus       111 ~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         111 TGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             CTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccccCCCchHhhhhhhhhhhHH
Confidence                      11234679999987766543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.76  E-value=7.3e-08  Score=90.22  Aligned_cols=153  Identities=11%  Similarity=0.053  Sum_probs=94.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +.|+|+||||||.||.+++++|+++|++|+++.|+.++...  ..+.                  ....+..+++|+.|.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~------------------~~~~v~~~~gD~~d~   61 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ------------------AIPNVTLFQGPLLNN   61 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH------------------TSTTEEEEESCCTTC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc------------------ccCCCEEEEeeCCCc
Confidence            46999999999999999999999999999999998776432  1221                  124588899999996


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  211 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  211 (388)
                      .++.+      ..+...|.++.+.....      .           .|+....+++.++..    . +..+++..||...
T Consensus        62 ~~~~~------~a~~~~~~~~~~~~~~~------~-----------~~~~~~~~~~~aa~~----a-gv~~~v~~Ss~~~  113 (350)
T d1xgka_          62 VPLMD------TLFEGAHLAFINTTSQA------G-----------DEIAIGKDLADAAKR----A-GTIQHYIYSSMPD  113 (350)
T ss_dssp             HHHHH------HHHTTCSEEEECCCSTT------S-----------CHHHHHHHHHHHHHH----H-SCCSEEEEEECCC
T ss_pred             HHHHH------HHhcCCceEEeeccccc------c-----------hhhhhhhHHHHHHHH----h-CCCceEEEeeccc
Confidence            65422      12246788877654321      1           122223334444322    2 2334666665421


Q ss_pred             -CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          212 -GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       212 -~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                       ...+......|..+|.....+.+       ..++....+.||....++
T Consensus       114 ~~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         114 HSLYGPWPAVPMWAPKFTVENYVR-------QLGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             GGGTSSCCCCTTTHHHHHHHHHHH-------TSSSCEEEEEECEEGGGC
T ss_pred             cccCCcccchhhhhhHHHHHHHHH-------hhccCceeeeeceeeccc
Confidence             12222334567778876655433       235677788888765543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=3.6e-08  Score=89.68  Aligned_cols=160  Identities=13%  Similarity=0.164  Sum_probs=95.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      ||||||+|.||..++++|+++|+ .|+++++-....+ . ..+.+                   .    ..+|..+.+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~-~~~~~-------------------~----~~~~~~~~~~~   56 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F-VNLVD-------------------L----NIADYMDKEDF   56 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-G-HHHHT-------------------S----CCSEEEEHHHH
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-h-hcccc-------------------c----chhhhccchHH
Confidence            89999999999999999999996 5777753211100 0 00100                   0    12233333332


Q ss_pred             HHHHHHHH--hhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 016493          135 QKLSNFAV--NEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  212 (388)
Q Consensus       135 ~~~~~~i~--~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  212 (388)
                         .+...  ..+..++++++.|+...    ....+   .+...+.|+.+...+.+.+...     ....++..|+. ..
T Consensus        57 ---~~~~~~~~~~~~~~~i~~~aa~~~----~~~~~---~~~~~~~~~~~~~~~l~~~~~~-----~i~~v~~ss~~-~~  120 (307)
T d1eq2a_          57 ---LIQIMAGEEFGDVEAIFHEGACSS----TTEWD---GKYMMDNNYQYSKELLHYCLER-----EIPFLYASSAA-TY  120 (307)
T ss_dssp             ---HHHHHTTCCCSSCCEEEECCSCCC----TTCCC---HHHHHHHTHHHHHHHHHHHHHH-----TCCEEEEEEGG-GG
T ss_pred             ---HHHHhhhhcccchhhhhhhccccc----ccccc---cccccccccccccccccccccc-----ccccccccccc-cc
Confidence               33222  23456889999987643    11222   3456677788887777765443     12334444443 22


Q ss_pred             CCC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccccc
Q 016493          213 GSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  259 (388)
Q Consensus       213 ~~~----------~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~PG~v~T~~  259 (388)
                      ..+          .++...|+.+|.+.+.+++.+..+.   ++.+..+.|..+-.|.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp~  174 (307)
T d1eq2a_         121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPR  174 (307)
T ss_dssp             TTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSS
T ss_pred             ccccccccccccccccccccccccchhhhhcccccccc---ccccccccceeEeecc
Confidence            211          1345679999999999888776554   5777788887776653

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=3.8e-05  Score=64.75  Aligned_cols=89  Identities=13%  Similarity=0.163  Sum_probs=66.0

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  125 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~  125 (388)
                      ...++++|+|+|.|+ ||.|++++..|++.|. +++++.|++++++++....++....               .......
T Consensus        12 ~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~---------------~~~~~~~   75 (182)
T d1vi2a1          12 SGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN---------------TDCVVTV   75 (182)
T ss_dssp             TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH---------------SSCEEEE
T ss_pred             cCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh---------------cCcceEe
Confidence            346889999999997 7999999999999997 6889999988776654433221111               2244567


Q ss_pred             ccCCCHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          126 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       126 ~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      .|+.+.+++.....       ..|++||+....
T Consensus        76 ~~~~~~~~~~~~~~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          76 TDLADQQAFAEALA-------SADILTNGTKVG  101 (182)
T ss_dssp             EETTCHHHHHHHHH-------TCSEEEECSSTT
T ss_pred             eecccccchhhhhc-------ccceeccccCCc
Confidence            88988877755443       689999998654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.99  E-value=1.5e-05  Score=67.27  Aligned_cols=80  Identities=19%  Similarity=0.261  Sum_probs=55.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|.+|+|+||+||+|.+.++.....|++||.++|++++.+.+.    +                 .+....   .|..++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~-----------------~Ga~~v---i~~~~~   84 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----Q-----------------IGFDAA---FNYKTV   84 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----H-----------------TTCSEE---EETTSC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----h-----------------hhhhhh---cccccc
Confidence            5899999999999999999999999999999999988754332    2                 122222   244444


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..+...+..  ...++|+++++.|.
T Consensus        85 ~~~~~~~~~~--~~~Gvd~v~D~vG~  108 (182)
T d1v3va2          85 NSLEEALKKA--SPDGYDCYFDNVGG  108 (182)
T ss_dssp             SCHHHHHHHH--CTTCEEEEEESSCH
T ss_pred             cHHHHHHHHh--hcCCCceeEEecCc
Confidence            4333333322  12369999999973

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=8.4e-06  Score=68.40  Aligned_cols=80  Identities=10%  Similarity=0.124  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|++|+|+||++|+|..+++.....|++|+.+++++++.+.+. ++                    +..   ...|.+++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l--------------------Ga~---~vi~~~~~   83 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA--------------------GAW---QVINYREE   83 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc--------------------CCe---EEEECCCC
Confidence            4899999999999999999999999999999999998875542 22                    222   12466665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +-.+++.+ +. .-..+|+++.+.|.
T Consensus        84 d~~~~v~~-~t-~g~g~d~v~d~~g~  107 (179)
T d1qora2          84 DLVERLKE-IT-GGKKVRVVYDSVGR  107 (179)
T ss_dssp             CHHHHHHH-HT-TTCCEEEEEECSCG
T ss_pred             CHHHHHHH-Hh-CCCCeEEEEeCccH
Confidence            44444322 21 12358999998874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2e-05  Score=65.89  Aligned_cols=79  Identities=18%  Similarity=0.260  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|++|+|+||+|++|...++.....|++|+++++++++.+.+. ++                    +...   ..|.++.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~--------------------Ga~~---vi~~~~~   83 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QN--------------------GAHE---VFNHREV   83 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT--------------------TCSE---EEETTST
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc-cc--------------------Cccc---ccccccc
Confidence            5899999999999999999999999999999999887764332 21                    2211   2366665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +-.+++.+....  ..+|+++.+.|
T Consensus        84 ~~~~~i~~~t~~--~g~d~v~d~~g  106 (174)
T d1yb5a2          84 NYIDKIKKYVGE--KGIDIIIEMLA  106 (174)
T ss_dssp             THHHHHHHHHCT--TCEEEEEESCH
T ss_pred             cHHHHhhhhhcc--CCceEEeeccc
Confidence            544443333211  35999999886

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.93  E-value=2.2e-05  Score=65.93  Aligned_cols=44  Identities=18%  Similarity=0.231  Sum_probs=39.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ..+|++|||+||+||.|....+.....|++|+.+++++++.+.+
T Consensus        29 ~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~   72 (176)
T d1xa0a2          29 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL   72 (176)
T ss_dssp             CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH
Confidence            44589999999999999999999889999999999998887543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.83  E-value=3.4e-05  Score=64.75  Aligned_cols=40  Identities=23%  Similarity=0.276  Sum_probs=36.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      +|++|+|+||+|++|...++.+...|++|+++++++++.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~   64 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   64 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc
Confidence            4799999999999999999999899999999999887754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.80  E-value=3.9e-05  Score=63.55  Aligned_cols=75  Identities=23%  Similarity=0.228  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+|.|+|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+++                     ........+..+.
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~---------------------~~~~~~~~~~~~~   58 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------------------QHSTPISLDVNDD   58 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC---------------------TTEEEEECCTTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc---------------------cccccccccccch
Confidence            3689999987 89999999999999999999999999887765432                     2234445566665


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      ......+.       ..|.++...
T Consensus        59 ~~~~~~i~-------~~~~~i~~~   75 (182)
T d1e5qa1          59 AALDAEVA-------KHDLVISLI   75 (182)
T ss_dssp             HHHHHHHT-------TSSEEEECS
T ss_pred             hhhHhhhh-------ccceeEeec
Confidence            55544432       467776544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.75  E-value=4.8e-05  Score=64.39  Aligned_cols=87  Identities=18%  Similarity=0.135  Sum_probs=56.7

Q ss_pred             CCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVI-TGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlI-TGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      |++++| +||+||+|.+.++-....|++||.+.|+.++.++..+.+++.                 +... ++..|-.+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l-----------------Gad~-vi~~~~~~~   90 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL-----------------GATQ-VITEDQNNS   90 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH-----------------TCSE-EEEHHHHHC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc-----------------cccE-EEeccccch
Confidence            555555 799999999999988889999999999888877766666552                 2221 222221122


Q ss_pred             HHHHHHHHHHHh-hcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVN-EFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~-~~g~iD~li~nAG~  157 (388)
                      .+..+.+.++.+ ..+++|+++++.|.
T Consensus        91 ~~~~~~v~~~~~~~g~~vdvv~D~vg~  117 (189)
T d1gu7a2          91 REFGPTIKEWIKQSGGEAKLALNCVGG  117 (189)
T ss_dssp             GGGHHHHHHHHHHHTCCEEEEEESSCH
T ss_pred             hHHHHHHHHHHhhccCCceEEEECCCc
Confidence            233333333333 34569999998873

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.73  E-value=0.00012  Score=60.29  Aligned_cols=47  Identities=26%  Similarity=0.414  Sum_probs=41.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l   97 (388)
                      ++++|+++|.|+ |++|..+++.|.++|+ ++.++.|+.++.+++.+++
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            678999999998 9999999999999997 6999999999887776654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.67  E-value=9.9e-05  Score=61.04  Aligned_cols=82  Identities=17%  Similarity=0.204  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|.+|+|+| +|++|...++.+...|++|+++++++++++.+.+ +                    +... .+..|-.+ 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~--------------------ga~~-~~~~~~~~-   81 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C--------------------GADV-TLVVDPAK-   81 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T--------------------TCSE-EEECCTTT-
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c--------------------CCcE-EEeccccc-
Confidence            578999998 5899999999999999999999999998754322 1                    2222 22233322 


Q ss_pred             HHHHHHHHHHHhhcC-CccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFG-SIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g-~iD~li~nAG~  157 (388)
                      ++.....+.+.+..| .+|++|.++|.
T Consensus        82 ~~~~~~~~~~~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          82 EEESSIIERIRSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             SCHHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred             cccchhhhhhhcccccCCceeeecCCC
Confidence            233444445555443 59999999985

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.67  E-value=0.00013  Score=61.11  Aligned_cols=41  Identities=24%  Similarity=0.274  Sum_probs=36.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+|+|+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a   69 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA   69 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc
Confidence            5899999997 8999999999999998 799999999987543

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=0.0001  Score=52.80  Aligned_cols=43  Identities=21%  Similarity=0.296  Sum_probs=38.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .++++++|+||+||+|....+.+...|++|+.+.+++++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999998889999999999998887544

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.59  E-value=0.00022  Score=59.26  Aligned_cols=78  Identities=17%  Similarity=0.288  Sum_probs=59.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      ...+++|+|+|-|+ ||-+++++..|.+.+.+|+++.|+.++++.+.+.+...                  ..+..+..|
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~------------------~~~~~~~~~   73 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY------------------GNIQAVSMD   73 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------------------SCEEEEEGG
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc------------------cccchhhhc
Confidence            46789999999986 88999999999998899999999999988887766431                  234445544


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                      -.+              ....|++||+....
T Consensus        74 ~~~--------------~~~~diiIN~tp~g   90 (171)
T d1p77a1          74 SIP--------------LQTYDLVINATSAG   90 (171)
T ss_dssp             GCC--------------CSCCSEEEECCCC-
T ss_pred             ccc--------------ccccceeeeccccc
Confidence            221              24689999998764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=8.8e-05  Score=61.67  Aligned_cols=51  Identities=10%  Similarity=0.113  Sum_probs=45.1

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   98 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~   98 (388)
                      ...+++||.|+|.|+ ||-+++++..|.+.|.+|.++.|+.++.+++.+.+.
T Consensus        12 ~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~   62 (170)
T d1nyta1          12 LSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA   62 (170)
T ss_dssp             HTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG
T ss_pred             cCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHh
Confidence            346889999999996 899999999999999999999999999887776553

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.57  E-value=0.00039  Score=56.16  Aligned_cols=119  Identities=15%  Similarity=0.177  Sum_probs=74.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      |.+.|.|+ |.+|..+|..|+.+|  .++++.++++++++....++.+....             ..........|   +
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~-------------~~~~~~~~~~d---~   64 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMAN-------------LEAHGNIVIND---W   64 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG-------------SSSCCEEEESC---G
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccc-------------cCCccceeccC---H
Confidence            67788895 899999999999988  47999999999887777777654321             12223333333   3


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++           ..-|++|..||...+.   .+.+-+.-...++.|    ..+++.+.+.+.+....+.++++|
T Consensus        65 ~~l-----------~~adiVVitaG~~~~~---~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          65 AAL-----------ADADVVISTLGNIKLQ---QDNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             GGG-----------TTCSEEEECCSCGGGT---C-------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHh-----------ccccEEEEeccccccc---cccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEec
Confidence            222           2579999999974311   111111112233444    456677788887775567777664

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.55  E-value=0.00064  Score=54.96  Aligned_cols=118  Identities=18%  Similarity=0.176  Sum_probs=75.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      -.++.+.|.|| |.+|..+|..|+.+|.  ++++.++++++++..+.++......             ....+.....|.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~~~~~d~   69 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVF-------------APKPVDIWHGDY   69 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTS-------------SSSCCEEEECCG
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccc-------------cCCCeEEEECCH
Confidence            45678889997 9999999999999884  7999999999888777777653211             122333334443


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                         ++           ...-|++|..+|...  .+ .+..    ...+..|    ..+++.+.+.+.+....+.++++|
T Consensus        70 ---~~-----------l~daDvvvitag~~~--~~-~~~R----~dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          70 ---DD-----------CRDADLVVICAGANQ--KP-GETR----LDLVDKN----IAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             ---GG-----------TTTCSEEEECCSCCC--CT-TTCS----GGGHHHH----HHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ---HH-----------hccceeEEEeccccc--cc-Ccch----hHHHHHH----HHHHHHHHHHHHhhCCCceEEEec
Confidence               21           235799999999754  21 1111    1223333    445566667666655567777774

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.49  E-value=0.00056  Score=55.20  Aligned_cols=115  Identities=18%  Similarity=0.247  Sum_probs=71.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .+.+.|.|+ |.+|..+|..|+.+|  .+|++.++++++++....++......             . ........|.  
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~-------------~-~~~~~~~~d~--   67 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAF-------------T-APKKIYSGEY--   67 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGG-------------S-CCCEEEECCG--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccc-------------c-CCceEeeccH--
Confidence            456788896 899999999999988  58999999998877666666542211             1 1223334443  


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                       ++           ....|++|..||...  .+  .   +.-...++.|    ..+++...+.+.+....+.++++|
T Consensus        68 -~~-----------~~~adivvitag~~~--~~--g---~~r~~l~~~N----~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          68 -SD-----------CKDADLVVITAGAPQ--KP--G---ESRLDLVNKN----LNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             -GG-----------GTTCSEEEECCCC-----------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -HH-----------hccccEEEEeccccc--CC--C---CCHHHHHHHH----HHHHHHHHHHHhhcCCCcEEEEeC
Confidence             21           236899999999743  11  1   1223344445    355666777777765566666664

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.47  E-value=0.00019  Score=59.55  Aligned_cols=42  Identities=21%  Similarity=0.285  Sum_probs=37.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      .+|++|+|+||+|++|...++.+...|++|+.+++++++.+.
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~   67 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL   67 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccc
Confidence            378999999999999999999988999999999999887654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.40  E-value=0.00029  Score=55.66  Aligned_cols=72  Identities=17%  Similarity=0.276  Sum_probs=56.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  134 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v  134 (388)
                      .|+|.|+ |-+|+.+|+.|.++|+.|+++++|+++.+++.++                      ....++..|.+|++.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~----------------------~~~~vi~Gd~~~~~~l   58 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----------------------IDALVINGDCTKIKTL   58 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------------------CSSEEEESCTTSHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh----------------------hhhhhccCcccchhhh
Confidence            5889997 8899999999999999999999999987765332                      1356788999998877


Q ss_pred             HHHHHHHHhhcCCccEEEEcc
Q 016493          135 QKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       135 ~~~~~~i~~~~g~iD~li~nA  155 (388)
                      +++      .....|.++...
T Consensus        59 ~~~------~i~~a~~vv~~t   73 (132)
T d1lssa_          59 EDA------GIEDADMYIAVT   73 (132)
T ss_dssp             HHT------TTTTCSEEEECC
T ss_pred             hhc------ChhhhhhhcccC
Confidence            654      113577777643

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.0015  Score=53.64  Aligned_cols=80  Identities=18%  Similarity=0.249  Sum_probs=56.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.+ +++                    +.. +++..+-.+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~--------------------Ga~-~~~~~~~~~   82 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI--------------------GAD-LVLQISKES   82 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT--------------------TCS-EEEECSSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh--------------------CCc-ccccccccc
Confidence            5789999987 9999999999999998 799999999987643 222                    222 223333344


Q ss_pred             HHHHHHHHHHHHhhcC-CccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFG-SIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g-~iD~li~nAG~  157 (388)
                      .....+..+   ..+| ++|++|.++|.
T Consensus        83 ~~~~~~~~~---~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          83 PQEIARKVE---GQLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHHHHHHHH---HHHTSCCSEEEECSCC
T ss_pred             ccccccccc---ccCCCCceEEEeccCC
Confidence            444444443   3333 69999999985

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.18  E-value=0.00053  Score=56.44  Aligned_cols=80  Identities=11%  Similarity=0.160  Sum_probs=55.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|.+++|.|++|++|...++.+...|. +|+++++++++++.+. ++                    +.. +  ..|.++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~--------------------Ga~-~--~i~~~~   82 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA--------------------GAD-Y--VINASM   82 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH--------------------TCS-E--EEETTT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc--------------------CCc-e--eeccCC
Confidence            578999999999999999999998995 8999999988765432 21                    222 1  224444


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+..++..+...  -+.+|+++.++|.
T Consensus        83 ~~~~~~~~~~~~--~~~~d~vid~~g~  107 (170)
T d1jvba2          83 QDPLAEIRRITE--SKGVDAVIDLNNS  107 (170)
T ss_dssp             SCHHHHHHHHTT--TSCEEEEEESCCC
T ss_pred             cCHHHHHHHHhh--cccchhhhccccc
Confidence            444444433221  1359999999985

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=0.00053  Score=59.44  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=55.5

Q ss_pred             CCCCCeEEEEc----------------CCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCc
Q 016493           50 KAGPRNVVITG----------------STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK  113 (388)
Q Consensus        50 ~~~gk~vlITG----------------as~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~  113 (388)
                      +++||+||||+                .||-+|.++|+++..+|++|.++.-....                        
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~------------------------   58 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL------------------------   58 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC------------------------
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc------------------------
Confidence            68999999998                46789999999999999999988653221                        


Q ss_pred             ccccCceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          114 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       114 ~~~~~~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                        ..+..+..+  .+.+.++...   .+.+.+...|++|.+|.+..
T Consensus        59 --~~p~~~~~~--~~~t~~~m~~---~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          59 --PTPPFVKRV--DVMTALEMEA---AVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             --CCCTTEEEE--ECCSHHHHHH---HHHHHGGGCSEEEECCBCCS
T ss_pred             --Ccccccccc--eehhhHHHHH---HHHhhhccceeEeeeechhh
Confidence              012234333  3444444444   44444457899999999865

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.16  E-value=0.00049  Score=57.46  Aligned_cols=44  Identities=20%  Similarity=0.310  Sum_probs=38.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ..+++++||+||+||+|...++.....|++||.++|++++.+.+
T Consensus        29 ~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             CGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            34567999999999999999999999999999999999886543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.14  E-value=0.005  Score=50.12  Aligned_cols=119  Identities=10%  Similarity=0.081  Sum_probs=77.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .+..+.+.|.|+ |.+|..+|..|+.+|.  ++++.+++++.++..+.++......             ..........|
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~-------------~~~~~~~~~~d   82 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLF-------------LQTPKIVADKD   82 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------CCCSEEEECSS
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccc-------------cCCCeEEeccc
Confidence            344567888896 8999999999999994  7999999998887777777542111             11222223333


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      .   +++           ..-|++|..||...  .+  ..+.   ...++.    ...+++.+.|.+.+....+.++++|
T Consensus        83 ~---~~~-----------~~adiVVitAg~~~--~~--g~tR---~~l~~~----N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          83 Y---SVT-----------ANSKIVVVTAGVRQ--QE--GESR---LNLVQR----NVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             G---GGG-----------TTCSEEEECCSCCC--CT--TCCG---GGGHHH----HHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             h---hhc-----------ccccEEEEecCCcc--cc--Ccch---HHHHHH----HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            3   222           36899999999743  21  2222   123333    3456677788877765567777775

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.10  E-value=0.00038  Score=57.58  Aligned_cols=44  Identities=23%  Similarity=0.313  Sum_probs=38.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ..++.+|||+||+||+|...++-....|++|+.+++++++.+.+
T Consensus        21 ~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          21 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            33577899999999999999988888999999999998887654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.09  E-value=0.00023  Score=59.91  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=51.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEE-EEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vi-l~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +++|||+||+||+|...++-....|++++ .+++++++..++.+++                    +..   ...|..++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~--------------------gad---~vi~~~~~   87 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL--------------------GFD---AAVNYKTG   87 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS--------------------CCS---EEEETTSS
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc--------------------cce---EEeeccch
Confidence            48999999999999999998888998655 4566666655444332                    122   23355554


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +. .+..+++..  ..+|+++.+.|.
T Consensus        88 ~~-~~~~~~~~~--~GvDvv~D~vGg  110 (187)
T d1vj1a2          88 NV-AEQLREACP--GGVDVYFDNVGG  110 (187)
T ss_dssp             CH-HHHHHHHCT--TCEEEEEESSCH
T ss_pred             hH-HHHHHHHhc--cCceEEEecCCc
Confidence            33 333333322  369999999873

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.09  E-value=0.0033  Score=51.23  Aligned_cols=118  Identities=13%  Similarity=0.132  Sum_probs=74.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++...+.|.|+ |.+|..+|..|+.+|.  ++++.++++++++..+.++......             .+........|.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~-------------~~~~~~~~~~d~   82 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLF-------------LSTPKIVFGKDY   82 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTT-------------CSCCEEEEESSG
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchh-------------cCCCeEEeccch
Confidence            34456777796 9999999999999984  7999999999888777777653211             112222223333


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                         ++           ...-|++|..||...  .+  ..+..   ..++    ....+.+.+.+.+.+....+.++++|
T Consensus        83 ---~~-----------~~~adivvitag~~~--~~--~~~R~---dll~----~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          83 ---NV-----------SANSKLVIITAGARM--VS--GQTRL---DLLQ----RNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             ---GG-----------GTTEEEEEECCSCCC--CT--TTCSS---CTTH----HHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             ---hh-----------hccccEEEEeccccc--CC--CCCHH---HHHH----HHHHHHHHHHHHHhccCCCeEEEEeC
Confidence               21           136899999999754  22  11111   1122    33445667777777665567777775

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.0071  Score=48.00  Aligned_cols=112  Identities=19%  Similarity=0.180  Sum_probs=71.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +.|.|+ |.+|..+|..++.+|  .++++.++++++++....++.....-              .........|   +++
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~--------------~~~~~~~~~~---~~~   64 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPF--------------TRRANIYAGD---YAD   64 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG--------------SCCCEEEECC---GGG
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccc--------------cccccccCCc---HHH
Confidence            556686 899999999999888  48999999998887766666553211              1222333333   222


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           ..-|++|..||....    ...+.   ...+..|    ..+++...+.+.+....+.++++|
T Consensus        65 ~-----------~~adivvitag~~~~----~g~~r---~dl~~~N----~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          65 L-----------KGSDVVIVAAGVPQK----PGETR---LQLLGRN----ARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             G-----------TTCSEEEECCCCCCC----SSCCH---HHHHHHH----HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             h-----------cCCCEEEEecccccC----CCcch---hhhhccc----cchHHHHHHHHHhcCCCcEEEEeC
Confidence            2           257999999997441    12232   2234444    346677777777765567777664

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.99  E-value=0.00042  Score=57.59  Aligned_cols=41  Identities=20%  Similarity=0.190  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      +|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a   68 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA   68 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH
Confidence            5789999986 8999999999989997 799999999886544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.94  E-value=0.014  Score=46.48  Aligned_cols=115  Identities=14%  Similarity=0.138  Sum_probs=72.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ..+.|.|+ |.+|.++|..++.+|.  ++++.++++++++....++.....-             .+........|.   
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~-------------~~~~~i~~~~~~---   64 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-------------YPTVSIDGSDDP---   64 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-------------STTCEEEEESCG---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhcccc-------------CCCceeecCCCH---
Confidence            34677797 9999999999999984  7999999998887666666553211             111111122222   


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++           ..-|++|..||...  .  ...+..   +.++.|.    .+++...+.+.+....+.++++|
T Consensus        65 ~~~-----------~daDvVVitaG~~~--~--~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          65 EIC-----------RDADMVVITAGPRQ--K--PGQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             GGG-----------TTCSEEEECCCCCC--C--TTCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             HHh-----------hCCcEEEEeccccc--C--CCCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            222           25799999999743  1  223332   3455554    45566667766665566666664

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.94  E-value=0.00083  Score=52.87  Aligned_cols=73  Identities=15%  Similarity=0.278  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |.++|.|+ |-+|+.+|+.|.++|+.|++++.|+++.+++.+                       .....+..|.++++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-----------------------~~~~~~~gd~~~~~~   56 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----------------------YATHAVIANATEENE   56 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-----------------------TCSEEEECCTTCTTH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-----------------------hCCcceeeecccchh
Confidence            56788887 789999999999999999999999988765421                       123456789999887


Q ss_pred             HHHHHHHHHhhcCCccEEEEccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ++++      ...+.|.+|...+
T Consensus        57 l~~a------~i~~a~~vi~~~~   73 (134)
T d2hmva1          57 LLSL------GIRNFEYVIVAIG   73 (134)
T ss_dssp             HHHH------TGGGCSEEEECCC
T ss_pred             hhcc------CCccccEEEEEcC
Confidence            6553      1125688877664

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.93  E-value=0.0076  Score=48.16  Aligned_cols=116  Identities=16%  Similarity=0.159  Sum_probs=68.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChH--HHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           55 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~--~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .+.|.||+|.+|..+|..|+.+|  .++++.+++++  +++....++.......           ....++.....+  |
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~-----------~~~~~~~~~~~~--d   68 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-----------RSDANIYVESDE--N   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-----------CCCCEEEEEETT--C
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccccc-----------ccCCccccCCcc--h
Confidence            38899999999999999999999  48999998863  4455555555432210           011223222221  2


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                      .+.           ...-|++|..||...  .  ...+.   ...++.|.    .+++...+.+.+.. +..|+.+
T Consensus        69 ~~~-----------l~~aDvVVitAG~~~--~--~g~sR---~dl~~~Na----~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          69 LRI-----------IDESDVVIITSGVPR--K--EGMSR---MDLAKTNA----KIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             GGG-----------GTTCSEEEECCSCCC--C--TTCCH---HHHHHHHH----HHHHHHHHHHHHHC-CCEEEEC
T ss_pred             HHH-----------hccceEEEEeccccc--C--CCCCh---hhhhhhhH----HHHHHHHHHHhccC-CCeEEEE
Confidence            221           235899999999743  1  22233   23455554    34555666665543 3445545

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.93  E-value=0.0015  Score=52.23  Aligned_cols=113  Identities=19%  Similarity=0.245  Sum_probs=64.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|.|+ |.+|..+|..++.+|.  ++++.++++++++....++.....              ..........   +++
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~--------------~~~~~~~~~~---~~~   64 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--------------FMGQMSLYAG---DYS   64 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--------------CTTCEEEC-----CGG
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcc--------------cCCCeeEeeC---cHH
Confidence            3555587 9999999999999984  799999999876655555543110              1112222222   222


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           ...-|++|..||...  .+  ..+   -...++.|.    .+++.+.+.+.+....+.++++|
T Consensus        65 ~-----------~~~adivvitag~~~--~~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          65 D-----------VKDCDVIVVTAGANR--KP--GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             G-----------GTTCSEEEECCCC----------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECS
T ss_pred             H-----------hCCCceEEEeccccc--Cc--Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEec
Confidence            1           235799999999743  11  122   233445454    55666677777654566666664

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.91  E-value=0.0012  Score=54.57  Aligned_cols=41  Identities=12%  Similarity=0.216  Sum_probs=36.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+++++++++++..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a   69 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA   69 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH
Confidence            5899999999 7899999999999995 899999999987643

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.88  E-value=0.0043  Score=50.43  Aligned_cols=41  Identities=20%  Similarity=0.220  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|++|+|.|+ |++|...++.+...|++|+++++++++++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            5889999886 9999999998889999999999999887543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.86  E-value=0.017  Score=45.91  Aligned_cols=114  Identities=12%  Similarity=0.141  Sum_probs=71.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCC--hHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~--~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .+.|+||+|.+|.++|..++.+|.  ++++.+.+  ++.++....++.....              ..........|.  
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~--------------~~~~~~i~~~~~--   65 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--------------YDSNTRVRQGGY--   65 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--------------TTCCCEEEECCG--
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc--------------ccCCceEeeCCH--
Confidence            478999999999999999999983  79999864  3444444445544221              112233333333  


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                       ++           ...-|++|..||...  .+  ..+   -.+.++.|    ..+.+...+.+.+....+.++++|
T Consensus        66 -~~-----------~~~aDiVvitaG~~~--~~--g~~---R~dl~~~N----~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          66 -ED-----------TAGSDVVVITAGIPR--QP--GQT---RIDLAGDN----APIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             -GG-----------GTTCSEEEECCCCCC--CT--TCC---HHHHHHHH----HHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             -HH-----------hhhcCEEEEeccccc--cc--CCc---hhhHHHHH----HHHHHHHHHHHHhcCCCceEEEec
Confidence             22           136899999999743  22  223   23445555    356677888888776566666664

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.85  E-value=0.0076  Score=47.87  Aligned_cols=114  Identities=16%  Similarity=0.113  Sum_probs=68.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      +.|+|| |.+|..+|..|+.+|  .++++.++++++++....++......             ..........  .++++
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~-------------~~~~~~i~~~--~~~~~   66 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV-------------GLFDTKVTGS--NDYAD   66 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH-------------HTCCCEEEEE--SCGGG
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccch-------------hcccceEEec--CCHHH
Confidence            567796 899999999999998  58999999998877655555332211             0112222222  22222


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                                 ....|++|..||....    ...+.   ...++.|.    .+++...+.+.+....+.++++|
T Consensus        67 -----------~~dadvvvitag~~~~----~g~~r---~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          67 -----------TANSDIVIITAGLPRK----PGMTR---EDLLMKNA----GIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             -----------GTTCSEEEECCSCCCC----TTCCH---HHHHHHHH----HHHHHHHHHHHHHCSSCEEEECC
T ss_pred             -----------hcCCeEEEEEEecCCC----CCCch---HHHHHHHH----HHHHHHHHHhhccCCCeEEEEec
Confidence                       2368999999998431    11222   23344443    34556666666554566666664

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.85  E-value=0.0035  Score=50.06  Aligned_cols=115  Identities=17%  Similarity=0.183  Sum_probs=69.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEE-EccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~Dls~~  131 (388)
                      |.+.|.|+ |.+|.++|..|+.++ .++++.+.++++.+....++......             .+...... .-|.   
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~-------------~~~~~~i~~~~d~---   64 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPI-------------EGFDVRVTGTNNY---   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHH-------------HTCCCCEEEESCG---
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccc-------------cCCCCEEEecCcH---
Confidence            45667796 999999999999888 58999999988877666666432111             01111111 1222   


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +++           ..-|++|.+||...  .+  ..+   -.+.++.|    ..+++...+.+.+....+.++++|
T Consensus        65 ~~~-----------~~advvvitag~~~--~~--~~~---r~dl~~~N----~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          65 ADT-----------ANSDVIVVTSGAPR--KP--GMS---REDLIKVN----ADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             GGG-----------TTCSEEEECCSCC----------------CHHHH----HHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             HHh-----------cCCCEEEEeeeccC--Cc--Ccc---hhHHHhHH----HHHHHHHHHHHhccCCCceEEEeC
Confidence            221           25799999999743  11  111   22334444    357788888888765566666664

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.78  E-value=0.0079  Score=48.49  Aligned_cols=117  Identities=15%  Similarity=0.197  Sum_probs=67.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---------eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD---------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~---------~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      .-.|.|+||+|.+|..++..|+..+.         +++...++.++++....++...                .......
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~   67 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----------------AFPLLAG   67 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----------------TCTTEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc----------------ccccccc
Confidence            34799999999999999999998662         2333455666665555444332                1122333


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH  202 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~  202 (388)
                      +...-.+++.           +...|++|..||...    -...+.++   .++.|    ..+++.+.+.+.+. ++.+.
T Consensus        68 ~~~~~~~~~~-----------~~~advViitaG~~~----~pg~~r~d---l~~~N----~~i~~~~~~~i~k~a~~~~~  125 (154)
T d1y7ta1          68 LEATDDPKVA-----------FKDADYALLVGAAPR----KAGMERRD---LLQVN----GKIFTEQGRALAEVAKKDVK  125 (154)
T ss_dssp             EEEESCHHHH-----------TTTCSEEEECCCCCC----CTTCCHHH---HHHHH----HHHHHHHHHHHHHHSCTTCE
T ss_pred             cccCCchhhh-----------cccccEEEeecCcCC----CCCCcHHH---HHHHH----HHHHHHHHHHHHHhCCCCcE
Confidence            3333222222           236899999999843    12334333   34444    34556666766663 33456


Q ss_pred             EEEec
Q 016493          203 IFNMD  207 (388)
Q Consensus       203 Iv~is  207 (388)
                      |+++|
T Consensus       126 vivvs  130 (154)
T d1y7ta1         126 VLVVG  130 (154)
T ss_dssp             EEECS
T ss_pred             EEEec
Confidence            66664

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.77  E-value=0.0031  Score=51.12  Aligned_cols=125  Identities=15%  Similarity=0.076  Sum_probs=74.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..+.+.+.|.|+ |.+|..+|..++..| +++++.+.++++++..+.++......             .+.......  -
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~-------------~~~~~~~~~--~   67 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSV-------------VDTNVSVRA--E   67 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH-------------TTCCCCEEE--E
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccc-------------cCCeeEEec--c
Confidence            345577888897 999999999988888 58999999998888777777653221             011111111  1


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCC-cCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP-LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++.+   +.       ...-|++|..+|.....+. -.+.+.   ...+..    ...+++...+.+.+....+.++++|
T Consensus        68 ~~~~---~~-------~~~adiVvitag~~~~~g~~~~~~tR---~~l~~~----n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          68 YSYE---AA-------LTGADCVIVTAGLTKVPGKPDSEWSR---NDLLPF----NSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             CSHH---HH-------HTTCSEEEECCSCSSCTTCCGGGCCG---GGGHHH----HHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             Cchh---hh-------hcCCCeEEEecccccCCCCCCcccch---hhhhhh----hHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            1221   11       1258999999998542111 111121   122333    3445666677766665567777765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.0017  Score=53.15  Aligned_cols=74  Identities=19%  Similarity=0.222  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|.+|+|.|+ ||+|...++.+...|++++++++++++.+. .+++                    +..   ...|..+.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l--------------------Gad---~~i~~~~~   84 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL--------------------GAD---EVVNSRNA   84 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH--------------------TCS---EEEETTCH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc--------------------CCc---EEEECchh
Confidence            5899999986 899999999888899999999999887643 2333                    122   12355555


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +...       ....++|++|.++|.
T Consensus        85 ~~~~-------~~~~~~D~vid~~g~  103 (168)
T d1uufa2          85 DEMA-------AHLKSFDFILNTVAA  103 (168)
T ss_dssp             HHHH-------TTTTCEEEEEECCSS
T ss_pred             hHHH-------HhcCCCceeeeeeec
Confidence            4332       222479999999986

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.71  E-value=0.0034  Score=51.38  Aligned_cols=41  Identities=27%  Similarity=0.190  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            6899999997 8999999988878999999999999987643

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.70  E-value=0.0036  Score=51.74  Aligned_cols=42  Identities=14%  Similarity=0.224  Sum_probs=37.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      ..|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++..
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A   70 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA   70 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH
Confidence            36899999986 8999999999999995 899999999998743

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.61  E-value=0.0052  Score=46.78  Aligned_cols=39  Identities=26%  Similarity=0.421  Sum_probs=35.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ++++||+++|.|+ |.+|..-|+.|++.|++|++.+....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            5899999999997 66999999999999999999987654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.59  E-value=0.013  Score=48.24  Aligned_cols=116  Identities=10%  Similarity=0.135  Sum_probs=64.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEE
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  123 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~--~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~  123 (388)
                      ...|.||||+|+||..++..|++...       .+.+.+.+.  +.++...-++....                ......
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a----------------~~~~~~   87 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL----------------YPLLRE   87 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT----------------CTTEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc----------------cccccC
Confidence            44699999999999999999997531       344555544  33444444443311                111111


Q ss_pred             EEccCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcE
Q 016493          124 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH  202 (388)
Q Consensus       124 ~~~Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~  202 (388)
                      +..- ++..          +.+...|++|..+|...    -...+.   ...++.|    ..+.+...+.+.+. ++...
T Consensus        88 ~~~~-~~~~----------~~~~~aDvVvi~ag~~r----kpg~tR---~Dll~~N----~~I~k~~~~~i~~~a~~~~~  145 (175)
T d7mdha1          88 VSIG-IDPY----------EVFEDVDWALLIGAKPR----GPGMER---AALLDIN----GQIFADQGKALNAVASKNVK  145 (175)
T ss_dssp             EEEE-SCHH----------HHTTTCSEEEECCCCCC----CTTCCH---HHHHHHH----HHHHHHHHHHHHHHSCTTCE
T ss_pred             cccc-ccch----------hhccCCceEEEeeccCC----CCCCcH---HHHHHHH----HHHHHHHHHHHHhhCCCCcE
Confidence            1111 1211          22347899999999843    123343   3345555    45556677777663 33455


Q ss_pred             EEEe
Q 016493          203 IFNM  206 (388)
Q Consensus       203 Iv~i  206 (388)
                      |+.+
T Consensus       146 vlvv  149 (175)
T d7mdha1         146 VLVV  149 (175)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            5555

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.59  E-value=0.0035  Score=51.76  Aligned_cols=41  Identities=12%  Similarity=0.171  Sum_probs=35.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   92 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~   92 (388)
                      -.|.+|+|.|+ ||||...++.+...|+ +|+++++++++++.
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~   68 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK   68 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH
Confidence            36789999985 9999999999999998 68888999988643

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.59  E-value=0.0023  Score=52.55  Aligned_cols=44  Identities=23%  Similarity=0.342  Sum_probs=38.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE   96 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~   96 (388)
                      ++|.|+|.|+ ||.+++++..|.+.|. +|.++.|+.++.+++.+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~   60 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL   60 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence            7889999997 8999999999999996 799999999988776554

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.57  E-value=0.0056  Score=48.90  Aligned_cols=115  Identities=19%  Similarity=0.256  Sum_probs=67.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      .+.|+||+|.+|.++|..|+.+|.  ++++.+.++.+.+.  .++...  .             ......... .   ..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~--~-------------~~~~~~~~~-~---~~   60 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHI--E-------------TRATVKGYL-G---PE   60 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTS--S-------------SSCEEEEEE-S---GG
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhh--h-------------hhcCCCeEE-c---CC
Confidence            578999999999999999999984  69999998765432  233210  0             011111111 1   12


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +..+.+       ..-|++|..||...  .+  ..+.   ...++.|..    +++.+.+.+.+....+.++++|-
T Consensus        61 ~~~~~~-------~~aDivVitag~~~--~~--g~sR---~~ll~~N~~----i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          61 QLPDCL-------KGCDVVVIPAGVPR--KP--GMTR---DDLFNTNAT----IVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             GHHHHH-------TTCSEEEECCSCCC--CT--TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             ChHHHh-------CCCCEEEECCCcCC--CC--CCCc---chHHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence            222111       26899999999743  22  1222   234555543    44666666666655677777753

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.56  E-value=0.0032  Score=50.55  Aligned_cols=44  Identities=25%  Similarity=0.311  Sum_probs=38.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      .++..-|++.|.||.|-+|..+|+.|.++|++|.+.+|+.....
T Consensus         4 ~~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           4 TINSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             CSCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             ccCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            35567789999999999999999999999999999999876544

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.0046  Score=49.62  Aligned_cols=77  Identities=13%  Similarity=0.091  Sum_probs=58.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .+++|.|. +-+|..++++|.++|.+|++++.++++..+..++...                   ..+.++..|.+|++.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-------------------~~~~vi~Gd~~d~~~   63 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------------------DNADVIPGDSNDSSV   63 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------------------TTCEEEESCTTSHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-------------------CCcEEEEccCcchHH
Confidence            36889997 6899999999999999999999998876555544422                   357789999999887


Q ss_pred             HHHHHHHHHhhcCCccEEEEccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ++++-      ..+.|.+|...+
T Consensus        64 L~~a~------i~~a~~vi~~~~   80 (153)
T d1id1a_          64 LKKAG------IDRCRAILALSD   80 (153)
T ss_dssp             HHHHT------TTTCSEEEECSS
T ss_pred             HHHhc------cccCCEEEEccc
Confidence            65432      235788877653

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.54  E-value=0.0032  Score=51.99  Aligned_cols=42  Identities=12%  Similarity=0.181  Sum_probs=36.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      ..|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++..
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a   68 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA   68 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH
Confidence            36899999996 8999999999999996 789999999988644

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.54  E-value=0.0021  Score=53.08  Aligned_cols=78  Identities=10%  Similarity=0.126  Sum_probs=51.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .|.+|+|.|+ |++|...++.+...|++ |+++++++++++.+ +++                    +. .++  .|..+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~--------------------Ga-~~~--i~~~~   82 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL--------------------GA-THV--INSKT   82 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH--------------------TC-SEE--EETTT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc--------------------CC-eEE--EeCCC
Confidence            5889999997 89999999998888985 55667888776543 222                    11 122  35555


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+ +.+.+.++.  .+++|++|.+.|.
T Consensus        83 ~~-~~~~i~~~t--~gg~D~vid~~G~  106 (174)
T d1f8fa2          83 QD-PVAAIKEIT--DGGVNFALESTGS  106 (174)
T ss_dssp             SC-HHHHHHHHT--TSCEEEEEECSCC
T ss_pred             cC-HHHHHHHHc--CCCCcEEEEcCCc
Confidence            33 333333332  2579999999985

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.51  E-value=0.0095  Score=47.85  Aligned_cols=120  Identities=13%  Similarity=0.107  Sum_probs=72.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ..+.|.|+ |++|..+|..++.++ .++++.++++++++....++.....-             ..........|  +++
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~v~~~~--~~~   67 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVM-------------AYSNCKVSGSN--TYD   67 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHH-------------HTCCCCEEEEC--CGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccc-------------cCCCcEEEecc--ccc
Confidence            35777785 899999999888888 58999999998887777766543211             11222222222  222


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCc-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +           ...-|++|..+|.....+.. .+.+   -...++.|    ..+++.+.+.+.+....+.++++|
T Consensus        68 ~-----------~~~advvvitag~~~~~g~~~~~~~---R~~l~~~N----~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          68 D-----------LAGADVVIVTAGFTKAPGKSDKEWN---RDDLLPLN----NKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             G-----------GTTCSEEEECCSCSSCTTCCSTTCC---GGGGHHHH----HHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             c-----------cCCCcEEEEecccccCCCCCccccc---hhHHHHHH----HHHHHHHHHHHHhcCCCeEEEEec
Confidence            1           23689999999975421111 1111   12234444    356666777777665566677764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.46  E-value=0.0038  Score=51.18  Aligned_cols=79  Identities=16%  Similarity=0.174  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC-
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls-  129 (388)
                      .|.+|+|.|+ +|+|...++.+...|+ +|+.+++++++++. .+++                    +.. +++  |.. 
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l--------------------Ga~-~~i--~~~~   82 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF--------------------GAT-ECI--NPQD   82 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH--------------------TCS-EEE--CGGG
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh--------------------CCc-EEE--eCCc
Confidence            5889999998 5999999999999996 57777888877643 3333                    111 122  222 


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+.+.+..+...  .+++|++|.+.|.
T Consensus        83 ~~~~~~~~~~~~~--~~g~D~vid~~G~  108 (176)
T d2fzwa2          83 FSKPIQEVLIEMT--DGGVDYSFECIGN  108 (176)
T ss_dssp             CSSCHHHHHHHHT--TSCBSEEEECSCC
T ss_pred             hhhHHHHHHHHHc--CCCCcEeeecCCC
Confidence            2233444444332  2469999999985

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.46  E-value=0.0025  Score=52.71  Aligned_cols=52  Identities=27%  Similarity=0.444  Sum_probs=45.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL  101 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~  101 (388)
                      ..+++||.|+|.|+ ||.+++++..|.+.| +|.+..|+.++.+++.+.+....
T Consensus        13 ~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~   64 (177)
T d1nvta1          13 IGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL   64 (177)
T ss_dssp             HCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhh
Confidence            45789999999996 789999999998776 99999999999999988886643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.41  E-value=0.047  Score=43.12  Aligned_cols=113  Identities=13%  Similarity=0.163  Sum_probs=70.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEE-ccCCCHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA-CDVCEPA  132 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dls~~~  132 (388)
                      +.|.|+ |.+|..+|..++.+|  .++++.++++++++....++......             .+....... -|.   +
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~-------------~~~~~~i~~~~d~---~   65 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-------------IDKYPKIVGGADY---S   65 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT-------------TTCCCEEEEESCG---G
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccc-------------cCCCCccccCCCH---H
Confidence            556686 999999999999888  47999999999887766667553221             111122222 232   2


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      ++           ..-|++|..||...  .  ...+.   ...+..|    ..+.+...+.+.+....+.++++|
T Consensus        66 ~~-----------~~adiVvitag~~~--~--~g~~r---~~l~~~n----~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          66 LL-----------KGSEIIVVTAGLAR--K--PGMTR---LDLAHKN----AGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             GG-----------TTCSEEEECCCCCC--C--SSCCH---HHHHHHH----HHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             Hh-----------ccccEEEEeccccC--C--CCCch---HHHHHHh----hHHHHHHHHHHHhhCCCcEEEEec
Confidence            21           35799999999743  1  12232   2233333    456677778777765566666664

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.32  E-value=0.0051  Score=50.39  Aligned_cols=41  Identities=20%  Similarity=0.291  Sum_probs=34.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++..
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~   73 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA   73 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHH
Confidence            5799999986 9999999999888886 677788988876543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.28  E-value=0.0051  Score=51.73  Aligned_cols=41  Identities=22%  Similarity=0.243  Sum_probs=34.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+|+|.|+ +++|...++.+...|+ +|+++++++++++.+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a   66 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA   66 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh
Confidence            5899999986 8999988888878887 789999999887643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.26  E-value=0.0099  Score=50.17  Aligned_cols=43  Identities=23%  Similarity=0.295  Sum_probs=38.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      -+++||+|+|-| -|.+|..+|+.|.+.|++|++.+.+.+++..
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            379999999998 5789999999999999999999999877654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.21  E-value=0.017  Score=47.29  Aligned_cols=99  Identities=18%  Similarity=0.120  Sum_probs=62.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCccc--ccCceEEEEEccCCCH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN--LVHAKVAGIACDVCEP  131 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~Dls~~  131 (388)
                      +.|-|.|- |-+|..+|+.|+++|++|++.+|++++.+++.++-.+...    ..+......  ..-.....+...+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~----~~~a~~~~~~~~~~~~~~~ii~~~~~~   77 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTK----VLGAHSLEEMVSKLKKPRRIILLVKAG   77 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSS----CEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccc----ccchhhhhhhhhhhcccceEEEecCch
Confidence            45677775 8899999999999999999999999998776443100000    000000000  0011223445567777


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+.+..+.+.....+=+++|...-.
T Consensus        78 ~~v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          78 QAVDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHHHhccccCcEEEecCcc
Confidence            88888888877766556777776643

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.02  Score=45.63  Aligned_cols=115  Identities=15%  Similarity=0.185  Sum_probs=67.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHH-CC--CeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           55 NVVITGSTRGLGKALAREFLL-SG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~-~G--~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .+.|+|++|.+|.++|..|+. .+  .++++.+.++ ..+..+-++....               ....... ..+-.+.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~---------------~~~~~~~-~~~~~~~   64 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---------------TAVKIKG-FSGEDAT   64 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSC---------------SSCEEEE-ECSSCCH
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCc---------------cccCCcE-EEcCCCc
Confidence            478999999999999998864 34  6899999865 4444444443310               1122222 2233344


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  208 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  208 (388)
                      +.+           ..-|++|..||...  .+  ..+.   .+.++.|.    .+++...+.+.+....+.++++|.
T Consensus        65 ~~~-----------~~aDvvvitaG~~~--k~--g~~R---~dl~~~N~----~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          65 PAL-----------EGADVVLISAGVRR--KP--GMDR---SDLFNVNA----GIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             HHH-----------TTCSEEEECCSCCC--CT--TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             ccc-----------CCCCEEEECCCccC--CC--Ccch---hhHHHHHH----HHHHHHHHHHHhhCCCcEEEEccC
Confidence            332           14799999999843  22  1222   23455553    455666666666545666777753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.006  Score=51.14  Aligned_cols=47  Identities=21%  Similarity=0.401  Sum_probs=41.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL  101 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~  101 (388)
                      |+|.|.|| |-+|..+|..++.+|++|++.+++++.+++..+.+++..
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l   51 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESL   51 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHH
Confidence            78999998 779999999999999999999999999888877776544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.17  E-value=0.0025  Score=46.85  Aligned_cols=38  Identities=26%  Similarity=0.184  Sum_probs=34.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      +++||+++|.|. |.-|+++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999998 67899999999999999999998654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.08  E-value=0.011  Score=48.26  Aligned_cols=41  Identities=12%  Similarity=0.189  Sum_probs=34.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~   93 (388)
                      .|.+|+|.|+ +|+|...+..+...|. +|+.+++++++++.+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a   69 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA   69 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH
Confidence            5789999986 7788888888888886 688899999887643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.05  E-value=0.017  Score=47.97  Aligned_cols=96  Identities=13%  Similarity=0.062  Sum_probs=61.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhc---------------CCCCcccccC
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAA---------------GGSSKKNLVH  118 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~---------------~~~~~~~~~~  118 (388)
                      |+|.|.|| |-||..+|..++.+|++|++.+++++.+++..+.+...........               ...... ...
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~   82 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYG-DFG   82 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSST-TGG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecccccc-ccc
Confidence            66889998 7799999999999999999999999988887776655433211000               000000 111


Q ss_pred             ceEEEEEccCCCHHHHHHHHHHHHhhcCCccEEE
Q 016493          119 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWI  152 (388)
Q Consensus       119 ~~i~~~~~Dls~~~~v~~~~~~i~~~~g~iD~li  152 (388)
                      ..-.++++-..+.+.-++++.++.+.. +.|.++
T Consensus        83 ~adlViEav~E~l~~K~~lf~~l~~~~-~~~~Ii  115 (186)
T d1wdka3          83 NVDLVVEAVVENPKVKQAVLAEVENHV-REDAIL  115 (186)
T ss_dssp             GCSEEEECCCSCHHHHHHHHHHHHTTS-CTTCEE
T ss_pred             ccceeeeeecchHHHHHHHHHHHHhhc-CCCeeE
Confidence            222345666677777777777775543 345444

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.04  E-value=0.0061  Score=49.99  Aligned_cols=41  Identities=17%  Similarity=0.257  Sum_probs=36.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   94 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~   94 (388)
                      .|++.|.|+ |.+|.++|..|+++|++|.+.+|++++.+...
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            378999997 88999999999999999999999988776543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.02  E-value=0.016  Score=46.80  Aligned_cols=41  Identities=24%  Similarity=0.244  Sum_probs=35.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5789999975 8999999999999999999999999887543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.93  E-value=0.031  Score=45.00  Aligned_cols=90  Identities=16%  Similarity=0.145  Sum_probs=55.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      +.|.|. |-+|.++|+.|.++|++|++.+|+++.++++.+.-.   .+    ...+..+......+.++.+   ..++++
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~---~~----~~~~~~~~~~~~DiIilav---p~~~~~   71 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL---VD----EAGQDLSLLQTAKIIFLCT---PIQLIL   71 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS---CS----EEESCGGGGTTCSEEEECS---CHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc---cc----eeeeecccccccccccccC---cHhhhh
Confidence            556665 899999999999999999999999887665432100   00    0001111112334444433   356788


Q ss_pred             HHHHHHHhhcCCccEEEEccc
Q 016493          136 KLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ++++++.+...+=.++++.++
T Consensus        72 ~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          72 PTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHHHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhhhhcccccceeeccc
Confidence            888888665555455555544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.79  E-value=0.05  Score=41.06  Aligned_cols=87  Identities=15%  Similarity=0.251  Sum_probs=64.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++..+.++.|.|| |-+|+-++....+.|+++++.+.+++.-.                         ....-.++..|.
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA-------------------------~~va~~~i~~~~   60 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA-------------------------MHVAHRSHVINM   60 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG-------------------------GGGSSEEEECCT
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch-------------------------hhcCCeEEECCC
Confidence            4445678999995 77999999999999999999998765311                         011225678899


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHH
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI  175 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~  175 (388)
                      .|.+.+.+++...     ++|++.         -.++.++.+-++..
T Consensus        61 ~d~~~l~~~~~~~-----~~DviT---------~E~EnI~~~~L~~l   93 (111)
T d1kjqa2          61 LDGDALRRVVELE-----KPHYIV---------PEIEAIATDMLIQL   93 (111)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEE---------ECSSCSCHHHHHHH
T ss_pred             CCHHHHHHHHHhh-----CCceEE---------EEecCcCHHHHHHH
Confidence            9999999888765     689983         34566666665554

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.47  E-value=0.05  Score=44.12  Aligned_cols=78  Identities=19%  Similarity=0.201  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      .+.-+|+|.|+ +--|++.++.....|++|.+.+.+.++++++.....                    ..+   .+-.++
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--------------------~~~---~~~~~~   85 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--------------------SRV---ELLYSN   85 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGS---EEEECC
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--------------------ccc---eeehhh
Confidence            35678999997 668999999999999999999999998876544331                    122   223455


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                      .+.+++.+.       .-|++|..+=+..
T Consensus        86 ~~~l~~~~~-------~aDivI~aalipG  107 (168)
T d1pjca1          86 SAEIETAVA-------EADLLIGAVLVPG  107 (168)
T ss_dssp             HHHHHHHHH-------TCSEEEECCCCTT
T ss_pred             hhhHHHhhc-------cCcEEEEeeecCC
Confidence            666555443       5799999997754

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.25  E-value=0.13  Score=40.89  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=26.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS   87 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~-------~Vil~~R~~   87 (388)
                      .-.|.|+||+|.+|.++|..|+..+-       .+++.+.++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            34799999999999999999987552       356666544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.026  Score=45.69  Aligned_cols=41  Identities=20%  Similarity=0.276  Sum_probs=37.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      .+.+.||+++|.|= |-||+.+|+.+...|++|+++++++.+
T Consensus        19 ~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          19 DVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            46899999999994 689999999999999999999999855

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.97  E-value=0.19  Score=40.56  Aligned_cols=122  Identities=13%  Similarity=0.172  Sum_probs=66.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-----CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           54 RNVVITGSTRGLGKALAREFLLS-----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~-----G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..+.|.||++.-...+...++.+     +.+|++.+.++++++.....+.......           ..+.++.. ..  
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~--   69 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREK-----------APDIEFAA-TT--   69 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHH-----------CTTSEEEE-ES--
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHh-----------CCCcceEe-cC--
Confidence            34666777553222233333332     2489999999999886666554433220           01112221 11  


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhc----------------hHHHHHHHHHHH
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL----------------VGSILCTREAMR  192 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~----------------~g~~~l~~~~lp  192 (388)
                       |..   +.       ...-|++|+.+|....       ....-++.+..|+                .-....++.+.+
T Consensus        70 -d~~---ea-------l~~AD~Vvitag~~~~-------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~  131 (167)
T d1u8xx1          70 -DPE---EA-------FTDVDFVMAHIRVGKY-------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILD  131 (167)
T ss_dssp             -CHH---HH-------HSSCSEEEECCCTTHH-------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             -Chh---hc-------cCCCCEEEECCCcCCC-------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHH
Confidence             221   11       1368999999997431       1223344444442                223456677777


Q ss_pred             HHHcCCCCcEEEEec
Q 016493          193 VMRDQPKGGHIFNMD  207 (388)
Q Consensus       193 ~m~~~~~~g~Iv~is  207 (388)
                      .+++....+.++++|
T Consensus       132 ~i~~~~P~A~li~~T  146 (167)
T d1u8xx1         132 YMEKYSPDAWMLNYS  146 (167)
T ss_dssp             HHHHHCTTCEEEECC
T ss_pred             HHHhhCCCeEEEEeC
Confidence            777765667777774

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.90  E-value=0.0093  Score=47.64  Aligned_cols=38  Identities=11%  Similarity=0.267  Sum_probs=33.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~   86 (388)
                      .++++||++||.|| |.+|..-|+.|++.|++|++++..
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999998 669999999999999999999754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.75  E-value=0.058  Score=43.24  Aligned_cols=90  Identities=17%  Similarity=0.251  Sum_probs=54.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      |-|.| -|-+|..+|+.|+++|++|++.+|++++.+++.+.-..        ...+.  ...-.+...+-.=+.+.++++
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~--------~~~~~--~e~~~~~d~ii~~v~~~~~v~   71 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAE--------TASTA--KAIAEQCDVIITMLPNSPHVK   71 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE--------ECSSH--HHHHHHCSEEEECCSSHHHHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhh--------hcccH--HHHHhCCCeEEEEcCCHHHHH
Confidence            55566 48899999999999999999999999988765432100        00000  000112334455567778887


Q ss_pred             HHH---HHHHhhcCCccEEEEccc
Q 016493          136 KLS---NFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       136 ~~~---~~i~~~~g~iD~li~nAG  156 (388)
                      +++   +.+.....+=+++|.+.-
T Consensus        72 ~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          72 EVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHhCCcchhhccCCCCEEEECCC
Confidence            776   334444334456666553

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.69  E-value=0.062  Score=44.88  Aligned_cols=39  Identities=13%  Similarity=0.152  Sum_probs=34.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ..++||++.|.|- |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4678999999995 78999999999999999999987654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.60  E-value=0.026  Score=43.61  Aligned_cols=70  Identities=21%  Similarity=0.216  Sum_probs=51.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      |+++|.|. +.+|.+++++|  +|.+|++++.++++.+...    .                   ..+.++..|.++++.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~-------------------~~~~~i~Gd~~~~~~   54 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----R-------------------SGANFVHGDPTRVSD   54 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----H-------------------TTCEEEESCTTSHHH
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----h-------------------cCccccccccCCHHH
Confidence            67899986 77999999998  5677888899888765432    1                   246778899999887


Q ss_pred             HHHHHHHHHhhcCCccEEEEcc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      ++++      ...+.+.+|...
T Consensus        55 L~~a------~i~~A~~vi~~~   70 (129)
T d2fy8a1          55 LEKA------NVRGARAVIVNL   70 (129)
T ss_dssp             HHHT------TCTTCSEEEECC
T ss_pred             HHHh------hhhcCcEEEEec
Confidence            7652      224577777654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.30  E-value=0.024  Score=47.20  Aligned_cols=41  Identities=29%  Similarity=0.282  Sum_probs=34.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ..+.+.|.|| |-.|.++|..|++.|++|.+.+|+++..+++
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i   46 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLV   46 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence            3456889986 6699999999999999999999998776544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.28  E-value=0.077  Score=45.36  Aligned_cols=47  Identities=21%  Similarity=0.286  Sum_probs=40.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   95 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~   95 (388)
                      ..+++||+++|-|- |.+|..+|+.|.+.|++|+..+.+...++....
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~   80 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA   80 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH
Confidence            45799999999995 789999999999999999999999887765543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.097  Score=46.39  Aligned_cols=26  Identities=31%  Similarity=0.369  Sum_probs=22.4

Q ss_pred             CCChHHHHHHHHHHHCCCeEEEEeCC
Q 016493           61 STRGLGKALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        61 as~GIG~aiA~~La~~G~~Vil~~R~   86 (388)
                      .||-.|.++|+.+..+|++|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            45679999999999999999988643

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.16  E-value=0.094  Score=39.46  Aligned_cols=36  Identities=22%  Similarity=0.429  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .+|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            4589999996 88999999999999999999988654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.09  E-value=0.23  Score=41.17  Aligned_cols=75  Identities=27%  Similarity=0.262  Sum_probs=53.9

Q ss_pred             cCCCCCeEEEEcCCCh-HHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGSTRG-LGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas~G-IG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      -+++|++||=-|+++| +|.    .++.+|+ +|+.++.+++.++.+.+.++.                 .+.+..++..
T Consensus        43 ~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~-----------------~~~~~~~~~~  101 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGE-----------------FKGKFKVFIG  101 (201)
T ss_dssp             TSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGG-----------------GTTSEEEEES
T ss_pred             CCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHH-----------------cCCCceEEEC
Confidence            3678999999998766 443    3456785 899999999887766554332                 2356777888


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      |+.+.             .+++|++|.|.-.
T Consensus       102 d~~~~-------------~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         102 DVSEF-------------NSRVDIVIMNPPF  119 (201)
T ss_dssp             CGGGC-------------CCCCSEEEECCCC
T ss_pred             chhhh-------------CCcCcEEEEcCcc
Confidence            87442             3579999999865

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.02  E-value=0.16  Score=41.72  Aligned_cols=41  Identities=17%  Similarity=0.154  Sum_probs=35.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      ...+.||++.|.|. |.||+++|+.+...|++|+..++...+
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            34688999999995 889999999999999999999987554

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.86  E-value=0.52  Score=37.91  Aligned_cols=122  Identities=14%  Similarity=0.065  Sum_probs=67.2

Q ss_pred             eEEEEcCCChHHH--HHHHHHHHC----CCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           55 NVVITGSTRGLGK--ALAREFLLS----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        55 ~vlITGas~GIG~--aiA~~La~~----G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      .+.|.|| |..|.  ++...++..    +.++++.++++++++.....++.....             .+....+..  .
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~-------------~~~~~~i~~--~   67 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEE-------------VGADLKFEK--T   67 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHH-------------TTCCCEEEE--E
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHh-------------cCCCeEEEE--e
Confidence            3566675 44554  455555543    458999999999988766665553322             112222211  1


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHH-----------Hhh---------chHHHHHHH
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV-----------STN---------LVGSILCTR  188 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~-----------~vN---------~~g~~~l~~  188 (388)
                      +|.++   .+       ...|++|+.++....    ...+.+ ..-..           +.+         ..-...+++
T Consensus        68 td~~e---aL-------~dad~Vv~~~~~g~~----~~~~~~-~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~  132 (171)
T d1obba1          68 MNLDD---VI-------IDADFVINTAMVGGH----TYLEKV-RQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFV  132 (171)
T ss_dssp             SCHHH---HH-------TTCSEEEECCCTTHH----HHHHHH-HHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHH
T ss_pred             CChhh---cc-------cCCCeEeeecccccc----cceeee-hhcchhhhhccCCCccccCCCCCcceeeecchHHHHH
Confidence            23222   11       368999999987431    110000 00000           112         233677888


Q ss_pred             HHHHHHHcCCCCcEEEEec
Q 016493          189 EAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       189 ~~lp~m~~~~~~g~Iv~is  207 (388)
                      .+.+.+++....+.++++|
T Consensus       133 ~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1         133 DIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             HHHHHHHHHCTTCEEEECS
T ss_pred             HHHHHHHHHCcCeEEEEEC
Confidence            8889888776677888875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.76  E-value=0.053  Score=44.13  Aligned_cols=40  Identities=23%  Similarity=0.226  Sum_probs=33.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~   96 (388)
                      +-|.| -|-+|..+|++|+++|++|.+.+|++++.+++.++
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            34444 68899999999999999999999999988776554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.76  E-value=0.15  Score=42.22  Aligned_cols=40  Identities=18%  Similarity=0.101  Sum_probs=35.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ...++||++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            35689999999986 78999999999999999999998644

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.52  E-value=0.064  Score=43.41  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=38.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ..+++||+++|.|-|.=+|+-++..|.++|++|.++.+....+.
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            46889999999999999999999999999999998877665544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.37  E-value=0.066  Score=40.93  Aligned_cols=37  Identities=30%  Similarity=0.374  Sum_probs=32.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      +.++|+++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        27 ~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            346789999986 7999999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.13  Score=39.15  Aligned_cols=34  Identities=21%  Similarity=0.284  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      .|+++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            588999997 6899999999999999999999864

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.26  E-value=0.075  Score=42.59  Aligned_cols=39  Identities=18%  Similarity=0.254  Sum_probs=33.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      ++|-|.| .|-+|.++|++|+++|++|.+.+|++++.+++
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~   40 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL   40 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhh
Confidence            4567776 57899999999999999999999998876544

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.26  E-value=0.42  Score=38.41  Aligned_cols=119  Identities=8%  Similarity=0.028  Sum_probs=63.4

Q ss_pred             EEEEcC-CChHHHHHHHHHHHCC----CeEEEEeCChHHHH-HHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           56 VVITGS-TRGLGKALAREFLLSG----DRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        56 vlITGa-s~GIG~aiA~~La~~G----~~Vil~~R~~~~l~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +.|.|| |.|.+..++..+...-    .++++.+.++++.+ +..+.+.+.....            .+..+  -....+
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~------------~~~~~--~~~~~t   69 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEK------------AGVPI--EIHLTL   69 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHH------------TTCCC--EEEEES
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHh------------cCCCc--eeeecC
Confidence            556665 5677777777666532    48999999886532 2222222221110            01111  122334


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHH--HHHhh----------------chHHHHHHHHHH
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ--IVSTN----------------LVGSILCTREAM  191 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~--~~~vN----------------~~g~~~l~~~~l  191 (388)
                      |..+   .       ...-|++|+.||....         +.+.+  .+..|                ..-...+++.+.
T Consensus        70 d~~~---a-------l~gaDvVv~ta~~~~~---------~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~  130 (169)
T d1s6ya1          70 DRRR---A-------LDGADFVTTQFRVGGL---------EARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDII  130 (169)
T ss_dssp             CHHH---H-------HTTCSEEEECCCTTHH---------HHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHH
T ss_pred             Cchh---h-------cCCCCEEEEccccCCC---------CCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHH
Confidence            4321   1       1257999999997531         12222  12111                234556778888


Q ss_pred             HHHHcCCCCcEEEEec
Q 016493          192 RVMRDQPKGGHIFNMD  207 (388)
Q Consensus       192 p~m~~~~~~g~Iv~is  207 (388)
                      +.+.+....+.++++|
T Consensus       131 ~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1         131 RDMEELCPDAWLINFT  146 (169)
T ss_dssp             HHHHHHCTTCEEEECS
T ss_pred             HHHhhcCCCeEEEEeC
Confidence            8888776677777774

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.13  E-value=0.16  Score=41.79  Aligned_cols=39  Identities=13%  Similarity=0.080  Sum_probs=34.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      ..+++++++.|.|. |.||+++|+.|...|.+|+..+|..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            45789999999995 7899999999999999999999864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.13  E-value=0.28  Score=40.69  Aligned_cols=39  Identities=18%  Similarity=0.258  Sum_probs=34.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ..+.||++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            4678999999996 78999999999999999999998543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.062  Score=43.71  Aligned_cols=44  Identities=14%  Similarity=0.262  Sum_probs=39.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   91 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~   91 (388)
                      ..+++||+++|.|.|.=+|+-++..|+++|++|.++.++...+.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            46899999999999999999999999999999999987665544

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.08  E-value=0.09  Score=45.15  Aligned_cols=37  Identities=22%  Similarity=0.241  Sum_probs=32.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeC
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASR   85 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R   85 (388)
                      +.++++++|+|.|+ ||+|..+++.|++.|. ++.++|.
T Consensus        25 Q~kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          25 QEALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            44578899999995 8999999999999996 7888875

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.03  E-value=0.15  Score=38.71  Aligned_cols=34  Identities=24%  Similarity=0.187  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~   86 (388)
                      .+|.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            4578999986 789999999999999999999886

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.03  E-value=0.28  Score=36.92  Aligned_cols=37  Identities=19%  Similarity=0.259  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      +--+|.++|.|| |-||.++|..|++.|.+|.++.|+.
T Consensus        19 ~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          19 QNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            345688999996 8899999999999999999988754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.045  Score=43.63  Aligned_cols=34  Identities=18%  Similarity=0.255  Sum_probs=30.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      +|+|.|+ |.||..+|..|++.|++|.+++|++++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4778887 999999999999999999999998754

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.79  E-value=0.24  Score=37.55  Aligned_cols=35  Identities=20%  Similarity=0.328  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      -.|.++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            3588999996 7899999999999999999998754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.74  E-value=0.086  Score=41.71  Aligned_cols=39  Identities=23%  Similarity=0.330  Sum_probs=32.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVT   95 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G-~~Vil~~R~~~~l~~~~~   95 (388)
                      +.+.|+ |-+|.++++.|++.| ++|++.+|++++++++.+
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~   42 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK   42 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhh
Confidence            556676 889999999999888 899999999988766544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.73  E-value=0.095  Score=43.67  Aligned_cols=71  Identities=27%  Similarity=0.366  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ++.||+||=-|+++|+   ++..++..|+ +|+.++.+++.++.+.+.                     -..+.++.+|+
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N---------------------~~~~~~~~~D~  101 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN---------------------CGGVNFMVADV  101 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH---------------------CTTSEEEECCG
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc---------------------cccccEEEEeh
Confidence            6789999999998873   3344667885 699999998776543221                     13467888888


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+.             .++.|++|.|.-.
T Consensus       102 ~~l-------------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         102 SEI-------------SGKYDTWIMNPPF  117 (197)
T ss_dssp             GGC-------------CCCEEEEEECCCC
T ss_pred             hhc-------------CCcceEEEeCccc
Confidence            542             2589999998754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.73  E-value=0.085  Score=40.21  Aligned_cols=36  Identities=19%  Similarity=0.247  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .+|+++|.|| |-+|.++|..|+++|.+|.++.|.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4688999986 89999999999999999999988754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.70  E-value=0.28  Score=40.09  Aligned_cols=42  Identities=14%  Similarity=0.094  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   94 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~   94 (388)
                      +.-.|+|.|| +-.|++.++.....|++|.+.|.+.++++++.
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            3457999997 67999999999999999999999999887654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.70  E-value=0.18  Score=42.76  Aligned_cols=76  Identities=9%  Similarity=-0.057  Sum_probs=57.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ..++++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+....                 .+.++.++..|+.
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~-----------------~~~~v~~~~~d~~   94 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRS-----------------QGLKPRLACQDIS   94 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHH-----------------TTCCCEEECCCGG
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccc-----------------cCccceeeccchh
Confidence            4567899999999885   7888899999999999999887766555433                 2346888888886


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                      +.+           ..++.|++++.-+
T Consensus        95 ~~~-----------~~~~fD~i~~~~~  110 (246)
T d1y8ca_          95 NLN-----------INRKFDLITCCLD  110 (246)
T ss_dssp             GCC-----------CSCCEEEEEECTT
T ss_pred             hhc-----------ccccccccceeee
Confidence            642           1247899887544

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.56  E-value=0.056  Score=50.72  Aligned_cols=35  Identities=29%  Similarity=0.443  Sum_probs=30.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   86 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~   86 (388)
                      +++..|+|.|+ ||||.++++.|+..|. ++.++|.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            45578999998 7899999999999997 78888774

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.50  E-value=0.16  Score=39.49  Aligned_cols=76  Identities=14%  Similarity=0.270  Sum_probs=52.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEE-EeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           55 NVVITGSTRGLGKALAREFLLS-GDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~-G~~Vil-~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ++.|.|++|-+|+++++...+. +++++. .++.. .+..    +..                 .+..   +..|+|.++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~----~~~-----------------~~~D---vvIDFS~p~   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL----LTD-----------------GNTE---VVIDFTHPD   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH----HHT-----------------TTCS---EEEECCCTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh----hcc-----------------ccCC---EEEEcccHH
Confidence            4789999999999999987765 466654 34432 1211    111                 1122   567999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEcccc
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .+.+.++.+.+.  ++-+++-..|.
T Consensus        56 ~~~~~~~~~~~~--~~~~ViGTTG~   78 (135)
T d1yl7a1          56 VVMGNLEFLIDN--GIHAVVGTTGF   78 (135)
T ss_dssp             THHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--CCCEEEecccc
Confidence            999999988765  57788777765

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.31  E-value=0.086  Score=41.84  Aligned_cols=40  Identities=13%  Similarity=0.252  Sum_probs=33.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~   96 (388)
                      +.|.| .|-+|.++++.|.+.|++|++.+|+.++.+++.++
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~   42 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ   42 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccc
Confidence            44555 58899999999999999999999999887765543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.28  E-value=0.14  Score=40.95  Aligned_cols=39  Identities=26%  Similarity=0.335  Sum_probs=33.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHH
Q 016493           54 RNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMT   93 (388)
Q Consensus        54 k~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~~~l~~~   93 (388)
                      |.++|.|. |-||.++|+.|.+.|+  +|+..+|+++.++.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a   42 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKA   42 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHH
Confidence            56888885 8999999999999995  788899998877654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.18  E-value=0.1  Score=41.33  Aligned_cols=49  Identities=22%  Similarity=0.328  Sum_probs=34.6

Q ss_pred             hhhhhhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           41 ANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        41 ~~~~~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      +...+.......++.++|-.+++-||.++|..|+++|.+|.++.+.+.-
T Consensus        28 ~~d~l~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          28 PEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             HHHHHHTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             HHHHhcCccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            3344444434444444444566899999999999999999999987543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.07  E-value=0.22  Score=37.49  Aligned_cols=34  Identities=18%  Similarity=0.175  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      .|+++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            588999996 7899999999999999999999854

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.97  E-value=0.15  Score=40.86  Aligned_cols=41  Identities=24%  Similarity=0.234  Sum_probs=37.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      .+.+.||+++|.|= |-+|+.+|+.+...|++|+++..++-+
T Consensus        18 ~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          18 DFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             CceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            57899999999996 779999999999999999999999855

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.94  E-value=0.11  Score=43.81  Aligned_cols=35  Identities=26%  Similarity=0.286  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      ..|.|+|.|| |=.|.++|..|+++|++|.+++|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4467999996 7899999999999999999999863

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.88  E-value=0.3  Score=36.47  Aligned_cols=35  Identities=17%  Similarity=0.161  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      -.|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        20 ~p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            3578889886 8899999999999999999998864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.79  E-value=0.68  Score=37.70  Aligned_cols=39  Identities=18%  Similarity=0.084  Sum_probs=34.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ..+.++++.|.|. |.||+++|+.+...|++|+..++...
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence            4688999999985 88999999999999999999988543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.72  E-value=0.18  Score=38.84  Aligned_cols=73  Identities=14%  Similarity=0.248  Sum_probs=54.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  133 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~-~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~  133 (388)
                      .+.|.|++|-+|+++++.+.++|++++.. +++....                         .....   +..|+|.++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~-------------------------~~~~D---VvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE-------------------------LDSPD---VVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE-------------------------CSCCS---EEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH-------------------------hccCC---EEEEecCHHH
Confidence            38999999999999999999999987754 4432210                         01122   4669999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEcccc
Q 016493          134 VQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       134 v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.+.++.+.+.  ++-+++-..|.
T Consensus        54 ~~~~l~~~~~~--~~p~ViGTTG~   75 (128)
T d1vm6a3          54 LPKTVDLCKKY--RAGLVLGTTAL   75 (128)
T ss_dssp             HHHHHHHHHHH--TCEEEECCCSC
T ss_pred             HHHHHHHHHhc--CCCEEEEcCCC
Confidence            99999988776  56788777775

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.68  E-value=0.92  Score=37.16  Aligned_cols=145  Identities=10%  Similarity=0.117  Sum_probs=77.8

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           49 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        49 ~~~~gk~vlITGas--~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      -...|++++|...+  .....+++..|...|..++.+.-+..                                      
T Consensus        21 ~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~--------------------------------------   62 (209)
T d2fr1a2          21 ARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR--------------------------------------   62 (209)
T ss_dssp             CCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT--------------------------------------
T ss_pred             CCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc--------------------------------------
Confidence            34456655555433  34777888888888888776543321                                      


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEe
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  206 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  206 (388)
                        .+.+.   +.+ .....+.++.+|+-.+.......  ..+.  .    ...+...+.++|.+.    +.+...++.++
T Consensus        63 --~~~~~---l~~-~~~~~~~~~~vv~l~~~~~~~~~--~~~~--~----~~~~~~~l~l~qal~----~~~~~~~l~~v  124 (209)
T d2fr1a2          63 --CGRDE---LAE-RLRSVGEVAGVLSLLAVDEAEPE--EAPL--A----LASLADTLSLVQAMV----SAELGCPLWTV  124 (209)
T ss_dssp             --CCHHH---HHH-HHTTSCCCSEEEECTTTTCCCCS--SCGG--G----CHHHHHHHHHHHHHH----HTTCCCCEEEE
T ss_pred             --cCHHH---HHH-HhhccCCCCeEEEeCCCCCCCCc--chhH--H----HHHHHHHHHHHHHHH----hCCCCCcEEEE
Confidence              11222   222 22344678888888766431111  1110  0    112334455555543    22234556666


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 016493          207 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  251 (388)
Q Consensus       207 sS~~~~~~~~~~~~~Y~aSK~al~~l~~~la~el~~~gI~vn~v~  251 (388)
                      +..+..  ..+.-..-....+++-+|+++++.|+....+++..+.
T Consensus       125 T~~a~~--~~~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         125 TESAVA--TGPFERVRNAAHGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             EESCSC--SSTTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             EcCCcc--cCCCcccCCHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence            532111  1122233356788999999999999986555555553

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.60  E-value=0.58  Score=38.40  Aligned_cols=76  Identities=17%  Similarity=-0.007  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      ++.+||=.|++.|.   ++..|++.|++|+.++.+++-++.+.+.+..                 .+..+..+..|..+.
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~-----------------~~~~~~~~~~d~~~l   96 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKS-----------------RESNVEFIVGDARKL   96 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCCEEEECCTTSC
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcc-----------------ccccccccccccccc
Confidence            34578999999876   6678889999999999998887766555444                 234567778887763


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .          ......|+++++..+
T Consensus        97 ~----------~~~~~fD~I~~~~~l  112 (226)
T d1ve3a1          97 S----------FEDKTFDYVIFIDSI  112 (226)
T ss_dssp             C----------SCTTCEEEEEEESCG
T ss_pred             c----------ccCcCceEEEEecch
Confidence            2          111468999887654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.60  E-value=0.27  Score=41.32  Aligned_cols=42  Identities=19%  Similarity=0.087  Sum_probs=35.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   96 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~   96 (388)
                      .+++||.-|++.|   ..+..|+++|++|+.++-+++.++.+.++
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~   86 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTE   86 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            6789999999876   45788899999999999999887665544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.50  E-value=0.12  Score=42.22  Aligned_cols=39  Identities=23%  Similarity=0.277  Sum_probs=34.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ...++|.|+|.|| |--|++.|..|+++|++|.+..+++.
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3456899999996 78999999999999999999998754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.44  E-value=0.11  Score=39.40  Aligned_cols=35  Identities=23%  Similarity=0.302  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      +|.++|.|| |-+|.++|..|+++|.+|.++.|++.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            478899886 89999999999999999999988653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.42  E-value=0.15  Score=38.35  Aligned_cols=37  Identities=22%  Similarity=0.259  Sum_probs=32.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ..+|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            35799999996 88999999999999999999988654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.17  E-value=0.1  Score=42.42  Aligned_cols=36  Identities=8%  Similarity=0.058  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~-Vil~~R~~~   88 (388)
                      .+|+|+|.|| |-.|.+.|..|+++|++ |.+..|+..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3688999996 78999999999999985 989888654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.79  E-value=0.16  Score=38.05  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      .+|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            4588999986 8999999999999999999998854

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=90.79  E-value=0.6  Score=40.11  Aligned_cols=75  Identities=15%  Similarity=0.122  Sum_probs=52.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      ...|++||=.|+++|+   ++..+++.|++|+.++.++..++.+.+..+.                 .+....++..|+.
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~-----------------n~~~~~~~~~d~~  177 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKR-----------------NGVRPRFLEGSLE  177 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHH-----------------TTCCCEEEESCHH
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHH-----------------cCCceeEEecccc
Confidence            3578999999999986   2335677899999999999998877665543                 2234556666642


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      +          . ...++.|+++.|.
T Consensus       178 ~----------~-~~~~~fD~V~ani  192 (254)
T d2nxca1         178 A----------A-LPFGPFDLLVANL  192 (254)
T ss_dssp             H----------H-GGGCCEEEEEEEC
T ss_pred             c----------c-ccccccchhhhcc
Confidence            1          1 1235799999873

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=90.72  E-value=0.34  Score=39.82  Aligned_cols=40  Identities=20%  Similarity=0.107  Sum_probs=35.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      ..++||++.|.|. |.||+++|+.+...|.+|+..++....
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            5678999999996 789999999999999999999886543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.72  E-value=0.12  Score=44.14  Aligned_cols=34  Identities=24%  Similarity=0.278  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      +|+|+|.|| |-=|+..|.+|+++|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            688999996 6678999999999999999998753

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.39  E-value=0.18  Score=40.83  Aligned_cols=39  Identities=13%  Similarity=0.164  Sum_probs=35.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~   86 (388)
                      ..+++||+++|.|-|.=+|+=+|..|+++|+.|..+..+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            358999999999999999999999999999999988754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.14  E-value=0.21  Score=38.50  Aligned_cols=36  Identities=14%  Similarity=0.236  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .+|+++|.|| |-+|.++|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            5788999985 89999999999999999999988644

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.05  E-value=0.15  Score=41.51  Aligned_cols=33  Identities=24%  Similarity=0.356  Sum_probs=28.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           55 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .|.|.|+ |..|.++|..|++.|++|.+.+|+.+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            3567775 78999999999999999999999654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=90.04  E-value=0.22  Score=40.75  Aligned_cols=38  Identities=18%  Similarity=0.230  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      .++||++.|.|. |.||+.+|+.+...|++|+..+|++.
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            488999999997 55999999999999999999998753

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.99  E-value=0.48  Score=41.78  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  128 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl  128 (388)
                      ..+||+||-.|++.|+   ++..++++|+ +|+.++.++.. ..+.+...+..               ...++.++..|+
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~---------------~~~~i~~~~~~~   93 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNK---------------LEDTITLIKGKI   93 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTT---------------CTTTEEEEESCT
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhC---------------CCccceEEEeeH
Confidence            4689999999999886   5666778896 79999988753 33333322211               346788999998


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          129 CEPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       129 s~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      .+...          ...+.|+++..-
T Consensus        94 ~~l~~----------~~~~~D~Ivse~  110 (311)
T d2fyta1          94 EEVHL----------PVEKVDVIISEW  110 (311)
T ss_dssp             TTSCC----------SCSCEEEEEECC
T ss_pred             HHhcC----------ccccceEEEEee
Confidence            77431          124799998753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.75  E-value=0.17  Score=38.43  Aligned_cols=36  Identities=25%  Similarity=0.362  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      -+|.++|.|| |-||.++|..|.+.|.+|.++.|++.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4688999996 88999999999999999999988654

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.58  E-value=0.64  Score=39.03  Aligned_cols=78  Identities=23%  Similarity=0.118  Sum_probs=56.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEc
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  126 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  126 (388)
                      +....+++++|=.|++.|   .++..|+++|++|+.++.+++-++.+.+.+.+                 .+.++.++..
T Consensus        36 ~~~~~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~-----------------~~~~i~~~~~   95 (251)
T d1wzna1          36 EDAKREVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKE-----------------RNLKIEFLQG   95 (251)
T ss_dssp             HTCSSCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCCEEEES
T ss_pred             HhcCCCCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccc-----------------ccccchheeh
Confidence            334456789999999887   45667889999999999998777666555443                 2346888999


Q ss_pred             cCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          127 DVCEPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       127 Dls~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      |+.+..-           .+..|.+++.-
T Consensus        96 d~~~l~~-----------~~~fD~I~~~~  113 (251)
T d1wzna1          96 DVLEIAF-----------KNEFDAVTMFF  113 (251)
T ss_dssp             CGGGCCC-----------CSCEEEEEECS
T ss_pred             hhhhccc-----------ccccchHhhhh
Confidence            9876420           13689887753

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.32  E-value=0.22  Score=41.20  Aligned_cols=37  Identities=22%  Similarity=0.239  Sum_probs=31.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   93 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~   93 (388)
                      +.|.| .|-+|..+|..|+++|++|+..+.|+++.+.+
T Consensus         3 I~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            45555 58899999999999999999999998876654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.09  E-value=0.26  Score=37.58  Aligned_cols=37  Identities=22%  Similarity=0.323  Sum_probs=32.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      +-.+|.++|.|| |-||.++|..|.+.|.+|.++.|.+
T Consensus        23 ~~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          23 KEVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            345689999996 8999999999999999999998754

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.07  E-value=1.5  Score=38.77  Aligned_cols=117  Identities=11%  Similarity=0.099  Sum_probs=69.9

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGST-RGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas-~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +|++||=.|+. |+++.++    ++.|+ +|+.++.+++.++.+.+.++...               ...+++++..|+.
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ng---------------l~~~~~~~~~d~~  205 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNG---------------VEDRMKFIVGSAF  205 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTT---------------CGGGEEEEESCHH
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcC---------------CCccceeeechhh
Confidence            58889888875 5555544    45676 79999999998887766654421               2246777887764


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCcCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEec
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  207 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  207 (388)
                      +      ..........+.|++|.++.....       +..+.....    .....+.+.+++.++   .+|.++..|
T Consensus       206 ~------~~~~~~~~~~~fD~Vi~DpP~~~~-------~~~~~~~~~----~~y~~l~~~a~~ll~---pGG~lv~~s  263 (324)
T d2as0a2         206 E------EMEKLQKKGEKFDIVVLDPPAFVQ-------HEKDLKAGL----RAYFNVNFAGLNLVK---DGGILVTCS  263 (324)
T ss_dssp             H------HHHHHHHTTCCEEEEEECCCCSCS-------SGGGHHHHH----HHHHHHHHHHHTTEE---EEEEEEEEE
T ss_pred             h------hhHHHHhccCCCCchhcCCccccC-------CHHHHHHHH----HHHHHHHHHHHHHcC---CCcEEEEEe
Confidence            2      223333344679999998864321       111111111    133445566666665   356776665

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.02  E-value=1.4  Score=34.30  Aligned_cols=78  Identities=9%  Similarity=0.048  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCCh-HHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEcc
Q 016493           50 KAGPRNVVITGSTRG-LGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  127 (388)
Q Consensus        50 ~~~gk~vlITGas~G-IG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  127 (388)
                      .++|++||=.|+++| +|.+    .+++|+ +|+.++.+++..+.+.+.+....               ...++.+++.|
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~---------------~~~~~~ii~~D   72 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTK---------------AENRFTLLKME   72 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTT---------------CGGGEEEECSC
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcc---------------cccchhhhccc
Confidence            468999998887655 5554    457886 79999999988776655543311               23568888888


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          128 VCEPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       128 ls~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      ..+      ..+   ....+.|+++.+.
T Consensus        73 ~~~------~l~---~~~~~fDiIf~DP   91 (152)
T d2esra1          73 AER------AID---CLTGRFDLVFLDP   91 (152)
T ss_dssp             HHH------HHH---HBCSCEEEEEECC
T ss_pred             ccc------ccc---ccccccceeEech
Confidence            532      222   2335789998865

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=88.86  E-value=1.5  Score=38.78  Aligned_cols=81  Identities=15%  Similarity=0.051  Sum_probs=53.9

Q ss_pred             CCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTR-GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~-GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+|++||=.++.. |++.+    ++..|.+|+.++.++..++.+.+.++...                -.++.++..|..
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ng----------------l~~~~~i~~d~~  203 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNG----------------LGNVRVLEANAF  203 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTT----------------CTTEEEEESCHH
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcC----------------CCCcceeeccHH
Confidence            4789999888764 44443    34456799999999998887766654421                135777888774


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +.      .+...+...+.|.+|.+...
T Consensus       204 ~~------~~~~~~~~~~fD~Vi~DpP~  225 (318)
T d1wxxa2         204 DL------LRRLEKEGERFDLVVLDPPA  225 (318)
T ss_dssp             HH------HHHHHHTTCCEEEEEECCCC
T ss_pred             HH------hhhhHhhhcCCCEEEEcCCc
Confidence            42      22233334579999999854

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.61  E-value=0.26  Score=38.63  Aligned_cols=36  Identities=19%  Similarity=0.224  Sum_probs=29.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   92 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~   92 (388)
                      +-|.| .|-+|.++|+.|+++|++|+..+|++++...
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            44455 5899999999999999999999888766543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.41  E-value=0.25  Score=42.71  Aligned_cols=37  Identities=19%  Similarity=0.212  Sum_probs=32.7

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 016493           47 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS   84 (388)
Q Consensus        47 ~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~   84 (388)
                      ...+++||+++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        30 ~~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          30 ENDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TTCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            34689999999999 58899999999999999998664

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.39  E-value=0.92  Score=37.61  Aligned_cols=80  Identities=18%  Similarity=0.136  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|.+||-.|+++|--.++.-++...+.+|+.++.+++.++.+.+.++..                .-.++.++..|..+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~----------------~~~n~~~~~~d~~~~  138 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL----------------GIENVIFVCGDGYYG  138 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEESCGGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh----------------cccccccccCchHHc
Confidence            4789999999887666655555556679999999999888777766542                124566677776531


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .          ...++.|.++.+++.
T Consensus       139 ~----------~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         139 V----------PEFSPYDVIFVTVGV  154 (213)
T ss_dssp             C----------GGGCCEEEEEECSBB
T ss_pred             c----------ccccchhhhhhhccH
Confidence            1          122579999988875

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.07  E-value=0.26  Score=38.84  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCh
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSS   87 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~--~Vil~~R~~   87 (388)
                      .||+|+|.|| |-.|.++|..|.++|.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999997 6789999999999884  788888765

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.84  E-value=1.3  Score=35.47  Aligned_cols=77  Identities=22%  Similarity=0.213  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|.+||=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.+++..               ...++.++..|..+ 
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~g---------------l~~~v~~~~gda~~-   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHG---------------LGDNVTLMEGDAPE-   93 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTT---------------CCTTEEEEESCHHH-
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcC---------------CCcceEEEECchhh-
Confidence            5789999998876   3344556678899999999999888777765521               22578888887522 


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                               ........|.++.+.+
T Consensus        94 ---------~~~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          94 ---------ALCKIPDIDIAVVGGS  109 (186)
T ss_dssp             ---------HHTTSCCEEEEEESCC
T ss_pred             ---------cccccCCcCEEEEeCc
Confidence                     2233457899987754

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=87.83  E-value=1.5  Score=37.80  Aligned_cols=79  Identities=24%  Similarity=0.331  Sum_probs=53.3

Q ss_pred             CeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           54 RNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        54 k~vlITGas~G-IG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ++++-.|+++| |+.+++ +  ...++|+.++.+++.++-+.+..+.. .              ...++.+...|+.+. 
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~-~--------------~~~~~~i~~~~~~~~-  172 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERH-G--------------VSDRFFVRKGEFLEP-  172 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHT-T--------------CTTSEEEEESSTTGG-
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHc-C--------------CCceeEEeecccccc-
Confidence            45665666655 555544 3  35689999999999887666555431 1              235677788888653 


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                              ..+.++++|++|.|.-+..
T Consensus       173 --------~~~~~~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         173 --------FKEKFASIEMILSNPPYVK  191 (271)
T ss_dssp             --------GGGGTTTCCEEEECCCCBC
T ss_pred             --------cccccCcccEEEEcccccC
Confidence                    2234578999999998754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.52  E-value=0.25  Score=42.24  Aligned_cols=31  Identities=16%  Similarity=0.235  Sum_probs=28.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      |+|.|| |-.|.++|.+|+++|.+|++++|+.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788886 7899999999999999999999864

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=87.42  E-value=2.9  Score=30.76  Aligned_cols=82  Identities=12%  Similarity=0.065  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      ||+|||.=-..-+-..+...|.+.|++|+..+.+.+.+   .+.+++.                 ...+..+-.++-+.+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~-----------------~~dliilD~~mp~~~   60 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKEL-----------------KPDIVTMDITMPEMN   60 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHH-----------------CCSEEEEECSCGGGC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhc-----------------cCCEEEEecCCCCCC
Confidence            78999999999999999999999999998766665433   3333331                 234544444444443


Q ss_pred             HHHHHHHHHHhhcCCccEEEEcc
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      . -++++++.+....+-+++..+
T Consensus        61 G-~e~~~~ir~~~~~~pvi~ls~   82 (118)
T d1u0sy_          61 G-IDAIKEIMKIDPNAKIIVCSA   82 (118)
T ss_dssp             H-HHHHHHHHHHCTTCCEEEEEC
T ss_pred             H-HHHHHHHHHhCCCCcEEEEEc
Confidence            3 456666777777777777654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.39  E-value=1.1  Score=37.43  Aligned_cols=79  Identities=24%  Similarity=0.223  Sum_probs=58.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|.+||..|+++|--.++.-+++  |.+|+.+.++++-.+...+.+.+.                .-.++.++..|..+-
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~----------------g~~nv~~~~gd~~~g  139 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA----------------GVKNVHVILGDGSKG  139 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEESCGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc----------------CCceeEEEECccccC
Confidence            46789999999888888877776  577999999988777666666542                125788899988641


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccC
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                                ....++.|.++.+++..
T Consensus       140 ----------~~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         140 ----------FPPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             ----------CGGGCCEEEEEECSBBS
T ss_pred             ----------CcccCcceeEEeecccc
Confidence                      12336899999988773

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.28  E-value=0.58  Score=41.06  Aligned_cols=35  Identities=17%  Similarity=0.210  Sum_probs=31.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS   84 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~   84 (388)
                      .+++||+|+|-|- |.+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4789999999995 7899999999999999998765

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.18  E-value=0.5  Score=38.83  Aligned_cols=83  Identities=17%  Similarity=0.155  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +..+=+|-|+||...++.+.+ . +.+|+.++++++.++...+.+..                 .+.++.++..+.++..
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-----------------~~~r~~~~~~~f~~~~   85 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-----------------FSDRVSLFKVSYREAD   85 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-----------------GTTTEEEEECCGGGHH
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-----------------ccccccchhHHHhhHH
Confidence            344556888899999999876 3 47899999999988776665533                 3467899999887754


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTNK  159 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~~  159 (388)
                      .+   ....  ...++|.++..-|++.
T Consensus        86 ~~---~~~~--~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          86 FL---LKTL--GIEKVDGILMDLGVST  107 (192)
T ss_dssp             HH---HHHT--TCSCEEEEEEECSCCH
T ss_pred             HH---HHHc--CCCCcceeeeccchhH
Confidence            33   2221  1358999999999843

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=87.17  E-value=0.36  Score=38.72  Aligned_cols=43  Identities=21%  Similarity=0.040  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   97 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l   97 (388)
                      +|++||..|++.|   ..+..|+++|++|+.++.+++-++.+.+..
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~   62 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER   62 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence            6889999999877   377789999999999999998887665544

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=86.84  E-value=0.27  Score=42.62  Aligned_cols=36  Identities=31%  Similarity=0.395  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      -..|.|+|.|| |--|+..|..|+++|++|.+..+++
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35689999997 5679999999999999999998764

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=86.55  E-value=0.41  Score=40.31  Aligned_cols=36  Identities=22%  Similarity=0.176  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ..++|+|.|| |--|..+|..|+++|.+|++..|+++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4577999997 67899999999999999999998643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.17  E-value=0.41  Score=40.17  Aligned_cols=38  Identities=24%  Similarity=0.330  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      ...+|.|+|.|| |--|.+.|..|+++|++|.+..++.+
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            346899999997 67899999999999999999987654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.07  E-value=3.2  Score=31.75  Aligned_cols=36  Identities=11%  Similarity=0.158  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           52 GPRNVVITGST---RGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        52 ~gk~vlITGas---~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      +.|++.|.|+|   +..|..+++.|.+.|++|+.+..+.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~   56 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY   56 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcc
Confidence            46999999999   5799999999999999998886643

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=85.73  E-value=10  Score=32.90  Aligned_cols=82  Identities=17%  Similarity=0.129  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           52 GPRNVVITGST-RGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        52 ~gk~vlITGas-~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      +|++||=..+. ||++.+    .++.|+ +|+.++.++..++.+.+.++...-              ...++.++..|+.
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l--------------~~~~~~~i~~d~~  205 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHL--------------DMANHQLVVMDVF  205 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTC--------------CCTTEEEEESCHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcc--------------cCcceEEEEccHH
Confidence            58888877765 555543    345787 699999999888776665543210              1246788888873


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                            +.++...++..+.|++|.+.-.
T Consensus       206 ------~~l~~~~~~~~~fD~Ii~DPP~  227 (317)
T d2b78a2         206 ------DYFKYARRHHLTYDIIIIDPPS  227 (317)
T ss_dssp             ------HHHHHHHHTTCCEEEEEECCCC
T ss_pred             ------HHHHHHHhhcCCCCEEEEcChh
Confidence                  2333344444679999998753

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.63  E-value=0.28  Score=36.12  Aligned_cols=42  Identities=14%  Similarity=0.116  Sum_probs=34.2

Q ss_pred             hhcccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           45 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        45 ~~~~~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      .+...+++||+|+|.|+ |-=|..+|..|++.+.+|++..|+.
T Consensus        24 y~~~~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          24 FREPELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CCCGGGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CcchhhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            34556789999999997 4678899999999888888777754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=85.28  E-value=0.59  Score=39.89  Aligned_cols=35  Identities=23%  Similarity=0.249  Sum_probs=31.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 016493           49 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS   84 (388)
Q Consensus        49 ~~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~   84 (388)
                      .+++||+|+|-| -|..|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            479999999998 58899999999999999998765

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.20  E-value=3.1  Score=32.58  Aligned_cols=38  Identities=16%  Similarity=0.164  Sum_probs=23.8

Q ss_pred             EEEEcCCChHHHHHHHH--HHHC----CCeEEEEeCChHHHHHHH
Q 016493           56 VVITGSTRGLGKALARE--FLLS----GDRVVVASRSSESVRMTV   94 (388)
Q Consensus        56 vlITGas~GIG~aiA~~--La~~----G~~Vil~~R~~~~l~~~~   94 (388)
                      +.|.||++ .|...+-.  +...    +.++++.+.++++++...
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~   46 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV   46 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHH
Confidence            66777754 45444422  2222    358999999999887543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=84.89  E-value=0.91  Score=32.67  Aligned_cols=39  Identities=15%  Similarity=0.211  Sum_probs=30.8

Q ss_pred             CCCCCeEEEEcCCChHH-HHHHHHHHHCCCeEEEEeCChHH
Q 016493           50 KAGPRNVVITGSTRGLG-KALAREFLLSGDRVVVASRSSES   89 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG-~aiA~~La~~G~~Vil~~R~~~~   89 (388)
                      ..+.|.+-+.|- +|+| .++|+.|.++|++|...|+....
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~   44 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV   44 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh
Confidence            345688888885 5677 55699999999999999987543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.71  E-value=1.2  Score=32.94  Aligned_cols=36  Identities=22%  Similarity=0.282  Sum_probs=28.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~---~G~~Vil~~R~~~   88 (388)
                      .+|.++|.|| |.+|.++|..|.+   +|.+|.++.|.+.
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            4688999997 8999999976655   4567999887543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.42  E-value=0.54  Score=41.56  Aligned_cols=36  Identities=17%  Similarity=0.373  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~   88 (388)
                      +.|.++|.|| |==|+.+|..|+++|++|.+..++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4688999996 66789999999999999999987654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=84.17  E-value=2  Score=33.35  Aligned_cols=88  Identities=14%  Similarity=0.141  Sum_probs=53.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHHHHH
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  135 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~~v~  135 (388)
                      +-+.|- |-+|..+|++|++.|+.+ ...|+.++..+..++....         .......  .....+...+.+.+.+.
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~i~~~~~~~~v~   69 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSE---------AVPLERV--AEARVIFTCLPTTREVY   69 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCE---------ECCGGGG--GGCSEEEECCSSHHHHH
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCc---------ccccccc--cceeEEEecccchhhhh
Confidence            556664 789999999999988765 5788887766554433110         0001111  12233445566777888


Q ss_pred             HHHHHHHhhcCCccEEEEccc
Q 016493          136 KLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       136 ~~~~~i~~~~g~iD~li~nAG  156 (388)
                      ...+.+.+...+-.++|.+.-
T Consensus        70 ~~~~~l~~~~~~~~~iid~sT   90 (156)
T d2cvza2          70 EVAEALYPYLREGTYWVDATS   90 (156)
T ss_dssp             HHHHHHTTTCCTTEEEEECSC
T ss_pred             hhhcccccccccccccccccc
Confidence            888877666555556665553

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=83.96  E-value=4.1  Score=35.66  Aligned_cols=82  Identities=15%  Similarity=0.051  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCC
Q 016493           52 GPRNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  130 (388)
Q Consensus        52 ~gk~vlITGas~G-IG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~  130 (388)
                      ++++||=..+.+| ++.+    +++.|++|+.++.++..++.+.+.+.....              ...++.++..|+. 
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~--------------~~~~~~~i~~D~~-  192 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGL--------------EQAPIRWICEDAM-  192 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTC--------------TTSCEEEECSCHH-
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcc--------------cCCcEEEEeCCHH-
Confidence            6788887776544 4443    456899999999999888777665543211              1246788887763 


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          131 PADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       131 ~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                           +.++...++..+.|++|.+.-.
T Consensus       193 -----~~l~~~~~~~~~fD~IilDPP~  214 (309)
T d2igta1         193 -----KFIQREERRGSTYDIILTDPPK  214 (309)
T ss_dssp             -----HHHHHHHHHTCCBSEEEECCCS
T ss_pred             -----HhHHHHhhcCCCCCEEEECCCc
Confidence                 2334444444679999998653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.87  E-value=1.2  Score=37.71  Aligned_cols=36  Identities=22%  Similarity=0.232  Sum_probs=30.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEe
Q 016493           48 HCKAGPRNVVITGSTRGLGKALAREFLL-SGDRVVVAS   84 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~aiA~~La~-~G~~Vil~~   84 (388)
                      ..+++||+++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            3578999999998 68899999999975 599988765

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=83.57  E-value=0.34  Score=41.73  Aligned_cols=41  Identities=15%  Similarity=0.187  Sum_probs=34.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHH-----HHHHHHCCCeEEEEeCChH
Q 016493           48 HCKAGPRNVVITGSTRGLGKAL-----AREFLLSGDRVVVASRSSE   88 (388)
Q Consensus        48 ~~~~~gk~vlITGas~GIG~ai-----A~~La~~G~~Vil~~R~~~   88 (388)
                      .+.-.++.++|+.|=||.|+..     |..|+++|++|.+++-|+.
T Consensus        14 ~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          14 DIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             HhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3444678888888899999986     7999999999999999864

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=83.54  E-value=0.5  Score=40.39  Aligned_cols=31  Identities=16%  Similarity=0.355  Sum_probs=27.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      |+|.|| |-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788885 6789999999999999999998753

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.09  E-value=2.2  Score=35.51  Aligned_cols=85  Identities=16%  Similarity=0.059  Sum_probs=60.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      +|.+||-.|+++|--.++.-++.....+|+.++++++-++.+.+.+++.....           .....+.+...|..+.
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~-----------~~~~~~~~~~gD~~~~  144 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTL-----------LSSGRVQLVVGDGRMG  144 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHH-----------HHTSSEEEEESCGGGC
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCccc-----------ccccceEEEEeecccc
Confidence            57899999999998888877788778899999999998887777765432110           0123566777776431


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      .          ...++.|.++.+++.
T Consensus       145 ~----------~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         145 Y----------AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             C----------GGGCCEEEEEECSBB
T ss_pred             c----------chhhhhhhhhhhcch
Confidence            1          123579999998876

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.68  E-value=0.56  Score=40.61  Aligned_cols=32  Identities=28%  Similarity=0.443  Sum_probs=27.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 016493           55 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   87 (388)
Q Consensus        55 ~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~   87 (388)
                      .|+|.|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3788886 6899999999999996 699998864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.65  E-value=0.6  Score=38.03  Aligned_cols=31  Identities=16%  Similarity=0.268  Sum_probs=27.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 016493           56 VVITGSTRGLGKALAREFLLSGDRVVVASRSS   87 (388)
Q Consensus        56 vlITGas~GIG~aiA~~La~~G~~Vil~~R~~   87 (388)
                      |+|.|| |=-|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788884 7789999999999999999998865

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=82.57  E-value=4.3  Score=31.96  Aligned_cols=44  Identities=18%  Similarity=0.216  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHH
Q 016493           52 GPRNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEE   99 (388)
Q Consensus        52 ~gk~vlITGas~G-IG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~   99 (388)
                      +|++||=.|+++| +|.    +++++|++|+.++.+++.++.+.+.++.
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~   85 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRR   85 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHh
Confidence            5677776666554 443    4567899999999999988777666544

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.52  E-value=1.7  Score=38.15  Aligned_cols=76  Identities=25%  Similarity=0.180  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+||+||-.|++.|+   ++..++++|+ +|+.++.++. ...+.+..+.. .              ...++.++..|+.
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n-~--------------~~~~v~~~~~~~~   92 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKAN-K--------------LDHVVTIIKGKVE   92 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHT-T--------------CTTTEEEEESCTT
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHh-C--------------CccccceEeccHH
Confidence            478999999998885   4566778896 6988987753 33333322221 1              3457889999887


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEcc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNA  155 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nA  155 (388)
                      +.+.          ...++|+++..-
T Consensus        93 ~~~~----------~~~~~D~ivs~~  108 (316)
T d1oria_          93 EVEL----------PVEKVDIIISEW  108 (316)
T ss_dssp             TCCC----------SSSCEEEEEECC
T ss_pred             Hccc----------ccceeEEEeeee
Confidence            7431          124789998764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.35  E-value=3.4  Score=33.04  Aligned_cols=78  Identities=12%  Similarity=0.016  Sum_probs=53.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC
Q 016493           50 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  129 (388)
Q Consensus        50 ~~~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls  129 (388)
                      .+++..||=.|++.|.   .+..|+++|++|+.++.+++.++.+.+...+.                .-..+.+...|+.
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~----------------~~~~~~~~~~d~~   88 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE----------------GLDNLQTDLVDLN   88 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------TCTTEEEEECCTT
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc----------------cccchhhhheecc
Confidence            4466789999987554   55678899999999999998887665544331                1134677778876


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          130 EPADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       130 ~~~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                      +..-           -+..|+++.+.-+
T Consensus        89 ~~~~-----------~~~fD~I~~~~~~  105 (198)
T d2i6ga1          89 TLTF-----------DGEYDFILSTVVM  105 (198)
T ss_dssp             TCCC-----------CCCEEEEEEESCG
T ss_pred             cccc-----------cccccEEEEeeee
Confidence            5431           1368999876643

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.25  E-value=3.6  Score=31.96  Aligned_cols=83  Identities=18%  Similarity=0.194  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCC--
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC--  129 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls--  129 (388)
                      +|+++.|.+.|||.|--++-.+.+.|-++--  -+++    +.++|++..+..               ...--.+|++  
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~----t~~~L~~~lp~~---------------~~~~NPlD~~~~   60 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEK----TIEELRSFLPPM---------------AAVKNPVDMIAS   60 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHH----HHHHHHHHSCTT---------------CEESSEEECCTT
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHH----HHHHHHHhCCCc---------------ccCCCcccccCC
Confidence            5788888888999999999999999976643  3333    334444433320               0011123433  


Q ss_pred             -CHHHHHHHHHHHHhhcCCccEEEEccc
Q 016493          130 -EPADVQKLSNFAVNEFGSIDIWINNAG  156 (388)
Q Consensus       130 -~~~~v~~~~~~i~~~~g~iD~li~nAG  156 (388)
                       +.+...+.++.+.+. +.+|.++....
T Consensus        61 ~~~~~~~~~l~~~~~d-~~vd~v~v~~~   87 (163)
T d2csua3          61 ARGEDYYRTAKLLLQD-PNVDMLIAICV   87 (163)
T ss_dssp             CCHHHHHHHHHHHHHS-TTCSEEEEEEE
T ss_pred             CCHHHHHHHHHHHHcC-CCcCEEEEeec
Confidence             556677777766544 67998765443

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=81.69  E-value=0.42  Score=39.05  Aligned_cols=31  Identities=23%  Similarity=0.323  Sum_probs=27.4

Q ss_pred             CeEEEEcCCChHHHH-----HHHHHHHCCCeEEEEe
Q 016493           54 RNVVITGSTRGLGKA-----LAREFLLSGDRVVVAS   84 (388)
Q Consensus        54 k~vlITGas~GIG~a-----iA~~La~~G~~Vil~~   84 (388)
                      |.+.|||-++|.|+.     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999998899985     6788999999999986

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.66  E-value=3.4  Score=30.11  Aligned_cols=37  Identities=22%  Similarity=0.298  Sum_probs=29.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChH
Q 016493           51 AGPRNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSE   88 (388)
Q Consensus        51 ~~gk~vlITGas~GIG~aiA~~La~---~G~~Vil~~R~~~   88 (388)
                      -.+|.++|.|| |-+|.++|..|.+   .|.+|.++.|.+.
T Consensus        16 ~~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          16 EAPKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             SCCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             ccCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            34689999996 7899999987655   4889999988543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=81.13  E-value=2.4  Score=34.59  Aligned_cols=77  Identities=16%  Similarity=0.111  Sum_probs=54.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCHH
Q 016493           53 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  132 (388)
Q Consensus        53 gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~~  132 (388)
                      +++||=.|++.|.-   +..++++|++|+.++-+++-++.+.+.+.+.                ...++.++..|..+..
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~----------------~~~~i~~~~~d~~~l~   76 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN----------------GHQQVEYVQGDAEQMP   76 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEECCC-CCC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc----------------cccccccccccccccc
Confidence            58899999988744   4567788999999999998777665544432                2256888999987642


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccC
Q 016493          133 DVQKLSNFAVNEFGSIDIWINNAGTN  158 (388)
Q Consensus       133 ~v~~~~~~i~~~~g~iD~li~nAG~~  158 (388)
                       .         ..+..|+++.+..+.
T Consensus        77 -~---------~~~~fD~v~~~~~l~   92 (231)
T d1vl5a_          77 -F---------TDERFHIVTCRIAAH   92 (231)
T ss_dssp             -S---------CTTCEEEEEEESCGG
T ss_pred             -c---------ccccccccccccccc
Confidence             1         114789999887653

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=81.13  E-value=1.5  Score=36.69  Aligned_cols=75  Identities=17%  Similarity=0.005  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHHhhhhhhcCCCCcccccCceEEEEEccCCCH
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  131 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dls~~  131 (388)
                      .|.+||-.|+++|--.+   .|++.+.+|+.+.++++..+.+.+.+.+                  ..++.++..|..+.
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~------------------~~nv~~~~~d~~~g  128 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY------------------YNNIKLILGDGTLG  128 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT------------------CSSEEEEESCGGGC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc------------------ccccccccCchhhc
Confidence            46789999998875433   4566678999999998877655433221                  24678888887541


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEcccc
Q 016493          132 ADVQKLSNFAVNEFGSIDIWINNAGT  157 (388)
Q Consensus       132 ~~v~~~~~~i~~~~g~iD~li~nAG~  157 (388)
                                ....++.|.++.+++.
T Consensus       129 ----------~~~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         129 ----------YEEEKPYDRVVVWATA  144 (224)
T ss_dssp             ----------CGGGCCEEEEEESSBB
T ss_pred             ----------chhhhhHHHHHhhcch
Confidence                      1123679999988875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=80.71  E-value=0.83  Score=39.83  Aligned_cols=32  Identities=19%  Similarity=0.371  Sum_probs=23.9

Q ss_pred             CeEEEEcCCChHHH-----HHHHHHHHCCCeEEEEeCC
Q 016493           54 RNVVITGSTRGLGK-----ALAREFLLSGDRVVVASRS   86 (388)
Q Consensus        54 k~vlITGas~GIG~-----aiA~~La~~G~~Vil~~R~   86 (388)
                      |.++|++|+.| |-     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56667666555 55     6999999999999877643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.37  E-value=0.68  Score=36.65  Aligned_cols=31  Identities=29%  Similarity=0.218  Sum_probs=25.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE
Q 016493           52 GPRNVVITGSTRGLGKALAREFLLSGDRVVVA   83 (388)
Q Consensus        52 ~gk~vlITGas~GIG~aiA~~La~~G~~Vil~   83 (388)
                      +++.|+|.|| |.+|.++|..|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4678999986 889999999999999765443