Query 016495
Match_columns 388
No_of_seqs 152 out of 781
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 14:31:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016495.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016495hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ctda_ a.39.1.5 (A:) Troponin 5.5 1.6E+02 0.012 17.5 1.9 11 344-354 18-28 (34)
2 d1q25a2 b.64.1.1 (A:130-280) C 5.1 97 0.0071 23.6 0.9 18 327-344 9-26 (151)
3 d1x3ha2 g.39.1.3 (A:43-74) Leu 4.5 91 0.0066 18.6 0.2 16 320-335 7-22 (32)
4 d2axtt1 f.23.34.1 (T:1-30) Pho 3.9 3.8E+02 0.028 15.0 3.2 20 366-385 4-23 (30)
5 d1soxa2 d.120.1.1 (A:3-93) Sul 3.8 1.3E+02 0.0097 21.2 0.8 13 330-342 24-36 (91)
6 d1mj4a_ d.120.1.1 (A:) Sulfite 3.7 1.2E+02 0.0087 20.9 0.4 13 330-342 24-36 (80)
7 d1cyoa_ d.120.1.1 (A:) Cytochr 3.6 1.5E+02 0.011 20.9 0.8 12 331-342 26-37 (88)
8 d1xxxa1 c.1.10.1 (A:5-300) Dih 3.3 2.1E+02 0.015 24.0 1.8 15 341-355 19-33 (296)
9 d1xkya1 c.1.10.1 (A:1-292) Dih 3.3 2.1E+02 0.016 23.7 1.8 15 341-355 15-29 (292)
10 d1f89a_ d.160.1.1 (A:) hypothe 3.2 2.1E+02 0.015 23.2 1.6 19 329-347 103-121 (281)
No 1
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=5.45 E-value=1.6e+02 Score=17.48 Aligned_cols=11 Identities=9% Similarity=0.099 Sum_probs=7.9
Q ss_pred CCccCHHHHHh
Q 016495 344 QYDLNIPAYNS 354 (388)
Q Consensus 344 ~~~ld~~~y~~ 354 (388)
||-+|.+.+.+
T Consensus 18 DGyiD~eEl~~ 28 (34)
T d1ctda_ 18 DGYIDIEELGE 28 (34)
T ss_dssp SSCBCHHHHHH
T ss_pred cccccHHHHHH
Confidence 67788877654
No 2
>d1q25a2 b.64.1.1 (A:130-280) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.07 E-value=97 Score=23.61 Aligned_cols=18 Identities=17% Similarity=0.229 Sum_probs=14.5
Q ss_pred hhccCCceeecceecCCC
Q 016495 327 LFTSSGHKYDTTKILTPQ 344 (388)
Q Consensus 327 lfd~~G~~Yn~s~il~~~ 344 (388)
++|.+|+.||.+...+.+
T Consensus 9 v~d~~g~~fDLspL~~~~ 26 (151)
T d1q25a2 9 AFDRELKKHDLNPLIKTS 26 (151)
T ss_dssp EECTTCCEEECGGGCCSS
T ss_pred EECCCCCEEeCchhhccC
Confidence 578889999999987543
No 3
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.45 E-value=91 Score=18.60 Aligned_cols=16 Identities=13% Similarity=0.366 Sum_probs=12.7
Q ss_pred CCCcchhhhccCCcee
Q 016495 320 FPIFSNQLFTSSGHKY 335 (388)
Q Consensus 320 lP~~S~~lfd~~G~~Y 335 (388)
-||.+.+-|.-+|++|
T Consensus 7 ~PF~~~~Fy~~~g~Py 22 (32)
T d1x3ha2 7 TSFSTGSFFELDGRPF 22 (32)
T ss_dssp CBSCSSCCEESSSCEE
T ss_pred CcCCCCCeEeECCccc
Confidence 3777788888888887
No 4
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=3.92 E-value=3.8e+02 Score=15.03 Aligned_cols=20 Identities=15% Similarity=0.142 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 016495 366 LSIGSGFARFTSTLTHVALF 385 (388)
Q Consensus 366 ~~y~~~fa~~ta~i~h~~L~ 385 (388)
+.|.+-||++-+++...+.+
T Consensus 4 i~yv~ifac~i~lfffaiff 23 (30)
T d2axtt1 4 ITYVFIFACIIALFFFAIFF 23 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHHHHHHh
Confidence 56888899988887776654
No 5
>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=3.84 E-value=1.3e+02 Score=21.23 Aligned_cols=13 Identities=15% Similarity=0.342 Sum_probs=10.7
Q ss_pred cCCceeecceecC
Q 016495 330 SSGHKYDTTKILT 342 (388)
Q Consensus 330 ~~G~~Yn~s~il~ 342 (388)
-+|++||+|+-++
T Consensus 24 i~g~VYDvT~f~~ 36 (91)
T d1soxa2 24 HGTDVFDVTDFVE 36 (91)
T ss_dssp ETTEEEECTTTTT
T ss_pred ECCEEEeccceec
Confidence 4688999999775
No 6
>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.67 E-value=1.2e+02 Score=20.93 Aligned_cols=13 Identities=15% Similarity=0.353 Sum_probs=10.4
Q ss_pred cCCceeecceecC
Q 016495 330 SSGHKYDTTKILT 342 (388)
Q Consensus 330 ~~G~~Yn~s~il~ 342 (388)
=+|++||+|+-+.
T Consensus 24 i~g~VYDvT~f~~ 36 (80)
T d1mj4a_ 24 LGSEVFDVTEFVD 36 (80)
T ss_dssp ETTEEEECTTTGG
T ss_pred ECCEEEeeeeeHh
Confidence 4688999999775
No 7
>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.57 E-value=1.5e+02 Score=20.93 Aligned_cols=12 Identities=42% Similarity=0.459 Sum_probs=10.3
Q ss_pred CCceeecceecC
Q 016495 331 SGHKYDTTKILT 342 (388)
Q Consensus 331 ~G~~Yn~s~il~ 342 (388)
+|++||+|+-++
T Consensus 26 ~g~VYDvT~f~~ 37 (88)
T d1cyoa_ 26 HYKVYDLTKFLE 37 (88)
T ss_dssp TTEEEECTTTTT
T ss_pred CCEEEecchhhc
Confidence 578999999885
No 8
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=3.31 E-value=2.1e+02 Score=23.98 Aligned_cols=15 Identities=7% Similarity=0.071 Sum_probs=12.6
Q ss_pred cCCCCccCHHHHHhc
Q 016495 341 LTPQYDLNIPAYNSY 355 (388)
Q Consensus 341 l~~~~~ld~~~y~~y 355 (388)
+|+|+.+|+++++++
T Consensus 19 f~~dg~iD~~~l~~~ 33 (296)
T d1xxxa1 19 FSGDGSLDTATAARL 33 (296)
T ss_dssp BCTTSCBCHHHHHHH
T ss_pred CCCCcCcCHHHHHHH
Confidence 467899999999875
No 9
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=3.26 E-value=2.1e+02 Score=23.73 Aligned_cols=15 Identities=0% Similarity=0.067 Sum_probs=12.2
Q ss_pred cCCCCccCHHHHHhc
Q 016495 341 LTPQYDLNIPAYNSY 355 (388)
Q Consensus 341 l~~~~~ld~~~y~~y 355 (388)
+|+|+++|.++++++
T Consensus 15 f~~d~~iD~~~~~~~ 29 (292)
T d1xkya1 15 FDINGNIDFAKTTKL 29 (292)
T ss_dssp BCTTSSBCHHHHHHH
T ss_pred cCCCcCcCHHHHHHH
Confidence 467889999998875
No 10
>d1f89a_ d.160.1.1 (A:) hypothetical protein yl85 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.17 E-value=2.1e+02 Score=23.19 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=0.0
Q ss_pred ccCCceeecceecCCCCcc
Q 016495 329 TSSGHKYDTTKILTPQYDL 347 (388)
Q Consensus 329 d~~G~~Yn~s~il~~~~~l 347 (388)
+.+|+.||..-++++||.+
T Consensus 103 ~~~~~~yNs~~~i~~~G~i 121 (281)
T d1f89a_ 103 PKTDKIYNTSIIFNEDGKL 121 (281)
T ss_dssp TTTCCEEEEEEEECTTSCE
T ss_pred cccCceeeecccccccccc
Done!