Query 016501
Match_columns 388
No_of_seqs 140 out of 1344
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 14:37:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016501.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016501hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 4E-150 1E-154 1162.4 35.5 386 1-388 155-541 (555)
2 1o0s_A NAD-ME, NAD-dependent m 100.0 1E-149 4E-154 1165.3 35.2 386 1-388 193-578 (605)
3 1pj3_A NAD-dependent malic enz 100.0 4E-149 1E-153 1157.6 35.7 387 1-388 157-546 (564)
4 3nv9_A Malic enzyme; rossmann 100.0 3E-108 9E-113 837.2 26.4 326 1-380 114-450 (487)
5 2a9f_A Putative malic enzyme ( 100.0 7.7E-98 3E-102 751.5 18.3 297 1-360 89-391 (398)
6 1vl6_A Malate oxidoreductase; 100.0 7E-92 2.4E-96 707.0 23.5 288 1-356 93-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 2.9E-72 9.7E-77 573.6 24.9 320 1-384 87-420 (439)
8 3gvp_A Adenosylhomocysteinase 99.1 4.8E-10 1.6E-14 114.5 15.6 169 50-257 112-319 (435)
9 3h9u_A Adenosylhomocysteinase; 99.1 3.7E-10 1.3E-14 115.5 12.8 131 95-259 171-312 (436)
10 3ond_A Adenosylhomocysteinase; 98.3 1.8E-06 6.1E-11 89.5 10.9 131 96-259 226-366 (488)
11 3n58_A Adenosylhomocysteinase; 98.3 4.4E-06 1.5E-10 85.9 12.5 128 96-257 208-346 (464)
12 1x13_A NAD(P) transhydrogenase 97.7 0.00015 5E-09 72.9 10.7 142 83-245 105-294 (401)
13 4dio_A NAD(P) transhydrogenase 97.6 4.6E-05 1.6E-09 77.3 5.1 110 125-252 187-322 (405)
14 3p2y_A Alanine dehydrogenase/p 97.3 0.00023 7.7E-09 71.7 6.4 104 126-246 182-305 (381)
15 3k92_A NAD-GDH, NAD-specific g 97.2 0.0052 1.8E-07 62.7 14.6 179 49-246 125-329 (424)
16 3d4o_A Dipicolinate synthase s 97.2 0.0032 1.1E-07 59.9 12.0 142 87-257 107-256 (293)
17 3r3j_A Glutamate dehydrogenase 97.1 0.039 1.3E-06 56.7 19.6 190 50-258 145-368 (456)
18 4fcc_A Glutamate dehydrogenase 97.0 0.032 1.1E-06 57.3 18.3 184 48-246 139-354 (450)
19 3aoe_E Glutamate dehydrogenase 96.9 0.0083 2.8E-07 61.0 13.2 187 49-258 122-332 (419)
20 1l7d_A Nicotinamide nucleotide 96.8 0.0058 2E-07 60.5 10.7 111 114-245 148-296 (384)
21 3aog_A Glutamate dehydrogenase 96.8 0.027 9.4E-07 57.6 15.8 179 50-246 140-344 (440)
22 1a4i_A Methylenetetrahydrofola 96.8 0.0029 1E-07 61.8 8.1 96 106-245 143-239 (301)
23 3l07_A Bifunctional protein fo 96.6 0.0046 1.6E-07 60.0 8.4 91 109-243 142-233 (285)
24 2bma_A Glutamate dehydrogenase 96.6 0.064 2.2E-06 55.3 16.6 179 51-246 159-372 (470)
25 2yfq_A Padgh, NAD-GDH, NAD-spe 96.5 0.035 1.2E-06 56.5 14.1 178 50-246 116-326 (421)
26 1edz_A 5,10-methylenetetrahydr 96.4 0.0057 1.9E-07 60.2 7.5 112 111-246 151-278 (320)
27 3p2o_A Bifunctional protein fo 96.4 0.0083 2.8E-07 58.2 8.5 95 108-246 140-236 (285)
28 1b0a_A Protein (fold bifunctio 96.4 0.0073 2.5E-07 58.7 7.8 96 106-245 137-233 (288)
29 3ngx_A Bifunctional protein fo 96.3 0.0081 2.8E-07 58.0 7.9 90 108-243 132-222 (276)
30 4a5o_A Bifunctional protein fo 96.3 0.009 3.1E-07 58.0 8.2 94 109-246 142-237 (286)
31 1v8b_A Adenosylhomocysteinase; 96.3 0.024 8.2E-07 58.6 11.8 124 102-258 234-357 (479)
32 3jyo_A Quinate/shikimate dehyd 96.2 0.0098 3.4E-07 57.0 7.8 88 112-219 111-205 (283)
33 3d64_A Adenosylhomocysteinase; 96.2 0.015 5.2E-07 60.2 9.6 114 102-246 254-367 (494)
34 4a26_A Putative C-1-tetrahydro 96.1 0.012 4.1E-07 57.5 7.7 95 105-243 142-239 (300)
35 1v9l_A Glutamate dehydrogenase 96.0 0.1 3.6E-06 53.0 14.5 180 50-247 115-326 (421)
36 3oj0_A Glutr, glutamyl-tRNA re 96.0 0.0048 1.6E-07 52.0 3.8 92 128-246 21-113 (144)
37 2c2x_A Methylenetetrahydrofola 95.9 0.018 6.2E-07 55.7 8.1 97 108-246 138-235 (281)
38 3don_A Shikimate dehydrogenase 95.7 0.011 3.9E-07 56.5 5.6 85 112-218 101-185 (277)
39 1c1d_A L-phenylalanine dehydro 95.7 0.35 1.2E-05 48.0 16.3 168 51-250 91-269 (355)
40 2rir_A Dipicolinate synthase, 95.6 0.025 8.4E-07 53.8 7.6 110 120-257 149-258 (300)
41 1gpj_A Glutamyl-tRNA reductase 95.6 0.076 2.6E-06 52.9 11.2 102 125-246 164-269 (404)
42 3u95_A Glycoside hydrolase, fa 95.5 0.013 4.5E-07 60.2 5.8 124 129-265 1-178 (477)
43 2tmg_A Protein (glutamate dehy 95.4 0.53 1.8E-05 47.7 16.8 179 50-246 114-319 (415)
44 2egg_A AROE, shikimate 5-dehyd 95.4 0.022 7.5E-07 54.6 6.3 87 113-219 125-215 (297)
45 2v6b_A L-LDH, L-lactate dehydr 95.2 0.005 1.7E-07 59.2 1.2 124 130-270 2-140 (304)
46 3u62_A Shikimate dehydrogenase 95.1 0.07 2.4E-06 50.2 8.8 144 59-243 42-200 (253)
47 1pjc_A Protein (L-alanine dehy 94.9 0.05 1.7E-06 53.3 7.5 96 126-245 165-269 (361)
48 1bgv_A Glutamate dehydrogenase 94.8 1.2 4E-05 45.7 17.6 177 51-246 136-350 (449)
49 1hyh_A L-hicdh, L-2-hydroxyiso 94.8 0.039 1.3E-06 52.7 6.3 101 129-246 2-125 (309)
50 4e12_A Diketoreductase; oxidor 94.8 0.06 2.1E-06 50.6 7.5 96 129-247 5-123 (283)
51 1mld_A Malate dehydrogenase; o 94.8 0.083 2.8E-06 51.0 8.6 101 130-246 2-120 (314)
52 3ce6_A Adenosylhomocysteinase; 94.7 0.2 6.9E-06 51.8 11.7 108 120-258 266-374 (494)
53 1pzg_A LDH, lactate dehydrogen 94.7 0.046 1.6E-06 53.2 6.5 124 129-269 10-157 (331)
54 3mw9_A GDH 1, glutamate dehydr 94.6 0.36 1.2E-05 50.1 13.3 180 49-246 135-352 (501)
55 3tri_A Pyrroline-5-carboxylate 94.5 0.081 2.8E-06 49.9 7.6 98 128-247 3-102 (280)
56 3dtt_A NADP oxidoreductase; st 94.4 0.082 2.8E-06 48.6 7.4 109 122-246 13-127 (245)
57 1leh_A Leucine dehydrogenase; 94.3 0.084 2.9E-06 52.5 7.6 159 56-246 93-264 (364)
58 1oju_A MDH, malate dehydrogena 94.3 0.028 9.6E-07 54.2 4.0 114 130-259 2-131 (294)
59 2hk9_A Shikimate dehydrogenase 94.3 0.098 3.4E-06 49.2 7.6 84 112-218 113-196 (275)
60 2o4c_A Erythronate-4-phosphate 94.2 0.37 1.3E-05 48.2 11.8 135 76-244 62-208 (380)
61 3oet_A Erythronate-4-phosphate 94.1 0.31 1.1E-05 48.9 11.2 120 95-246 83-213 (381)
62 3o8q_A Shikimate 5-dehydrogena 94.1 0.09 3.1E-06 50.3 7.0 99 59-172 50-159 (281)
63 3fbt_A Chorismate mutase and s 94.1 0.08 2.7E-06 50.9 6.6 104 113-246 107-218 (282)
64 1s6y_A 6-phospho-beta-glucosid 94.0 0.03 1E-06 57.2 3.5 128 128-269 7-175 (450)
65 3tnl_A Shikimate dehydrogenase 93.9 0.1 3.4E-06 50.9 7.0 91 112-219 138-237 (315)
66 3fef_A Putative glucosidase LP 93.9 0.087 3E-06 53.9 6.9 106 126-246 3-149 (450)
67 2i6t_A Ubiquitin-conjugating e 93.9 0.11 3.9E-06 50.0 7.3 120 129-269 15-150 (303)
68 3t4e_A Quinate/shikimate dehyd 93.9 0.096 3.3E-06 51.0 6.8 90 113-219 133-231 (312)
69 1ldn_A L-lactate dehydrogenase 93.8 0.032 1.1E-06 53.9 3.3 115 129-259 7-136 (316)
70 2hjr_A Malate dehydrogenase; m 93.8 0.043 1.5E-06 53.4 4.2 128 129-273 15-160 (328)
71 2ewd_A Lactate dehydrogenase,; 93.8 0.05 1.7E-06 52.2 4.6 99 129-246 5-124 (317)
72 1t2d_A LDH-P, L-lactate dehydr 93.8 0.038 1.3E-06 53.7 3.8 120 129-269 5-151 (322)
73 2d5c_A AROE, shikimate 5-dehyd 93.8 0.11 3.8E-06 48.1 6.8 80 113-218 102-181 (263)
74 2eez_A Alanine dehydrogenase; 93.7 0.11 3.6E-06 51.1 6.8 97 125-245 163-268 (369)
75 3d0o_A L-LDH 1, L-lactate dehy 93.7 0.051 1.8E-06 52.5 4.4 117 127-259 5-136 (317)
76 1obb_A Maltase, alpha-glucosid 93.6 0.075 2.6E-06 54.8 5.9 124 128-269 3-174 (480)
77 1o6z_A MDH, malate dehydrogena 93.6 0.059 2E-06 51.7 4.7 124 129-269 1-144 (303)
78 2zqz_A L-LDH, L-lactate dehydr 93.6 0.054 1.9E-06 52.8 4.5 127 128-270 9-151 (326)
79 3pwz_A Shikimate dehydrogenase 93.6 0.095 3.3E-06 49.9 6.1 99 59-172 44-153 (272)
80 1ez4_A Lactate dehydrogenase; 93.6 0.066 2.2E-06 51.9 5.1 126 129-270 6-147 (318)
81 1b8p_A Protein (malate dehydro 93.5 0.034 1.2E-06 53.9 3.0 121 128-259 5-146 (329)
82 3tum_A Shikimate dehydrogenase 93.5 0.13 4.4E-06 49.0 6.9 48 113-171 110-157 (269)
83 1u8x_X Maltose-6'-phosphate gl 93.4 0.037 1.3E-06 56.9 3.1 125 128-269 28-194 (472)
84 1up7_A 6-phospho-beta-glucosid 93.3 0.11 3.9E-06 52.4 6.4 124 129-269 3-164 (417)
85 1gtm_A Glutamate dehydrogenase 93.2 0.79 2.7E-05 46.4 12.4 115 50-176 114-250 (419)
86 2g1u_A Hypothetical protein TM 93.1 0.1 3.5E-06 44.3 5.0 102 124-244 15-119 (155)
87 1jw9_B Molybdopterin biosynthe 93.1 0.082 2.8E-06 49.2 4.7 38 125-173 28-65 (249)
88 1zud_1 Adenylyltransferase THI 93.0 0.087 3E-06 49.2 4.7 38 125-173 25-62 (251)
89 3h5n_A MCCB protein; ubiquitin 92.9 0.3 1E-05 48.0 8.6 39 124-173 114-152 (353)
90 1a5z_A L-lactate dehydrogenase 92.9 0.15 5E-06 49.1 6.3 104 130-247 2-120 (319)
91 3vku_A L-LDH, L-lactate dehydr 92.8 0.1 3.6E-06 51.0 5.2 117 127-259 8-138 (326)
92 1smk_A Malate dehydrogenase, g 92.8 0.16 5.4E-06 49.2 6.4 104 129-246 9-128 (326)
93 3h8v_A Ubiquitin-like modifier 92.7 0.12 4.2E-06 49.9 5.6 39 124-173 32-70 (292)
94 1nyt_A Shikimate 5-dehydrogena 92.6 0.21 7.2E-06 46.8 6.8 49 112-172 103-151 (271)
95 2hmt_A YUAA protein; RCK, KTN, 92.6 0.046 1.6E-06 44.5 1.9 103 126-246 4-108 (144)
96 1txg_A Glycerol-3-phosphate de 92.6 0.37 1.3E-05 45.3 8.5 94 130-246 2-107 (335)
97 2gcg_A Glyoxylate reductase/hy 92.5 1.3 4.5E-05 42.7 12.5 139 76-244 80-247 (330)
98 4g2n_A D-isomer specific 2-hyd 92.5 1.1 3.7E-05 44.1 12.0 190 95-325 116-336 (345)
99 2ekl_A D-3-phosphoglycerate de 92.3 0.88 3E-05 43.8 11.0 122 95-245 90-234 (313)
100 1y6j_A L-lactate dehydrogenase 92.3 0.11 3.8E-06 50.2 4.5 121 129-270 8-149 (318)
101 2xxj_A L-LDH, L-lactate dehydr 92.3 0.064 2.2E-06 51.8 2.8 125 129-269 1-141 (310)
102 1p77_A Shikimate 5-dehydrogena 92.2 0.17 5.8E-06 47.5 5.6 49 112-172 103-151 (272)
103 3d1l_A Putative NADP oxidoredu 92.2 0.15 5E-06 46.9 5.1 100 124-247 6-106 (266)
104 1guz_A Malate dehydrogenase; o 92.2 0.14 4.8E-06 49.1 5.1 100 130-246 2-121 (310)
105 2dpo_A L-gulonate 3-dehydrogen 92.2 0.15 5.1E-06 49.5 5.4 37 282-318 189-225 (319)
106 1z82_A Glycerol-3-phosphate de 92.2 0.2 7E-06 47.9 6.2 97 128-247 14-115 (335)
107 2vhw_A Alanine dehydrogenase; 92.1 0.16 5.5E-06 50.1 5.6 96 125-244 165-269 (377)
108 3rui_A Ubiquitin-like modifier 92.1 0.11 3.7E-06 51.5 4.3 38 125-173 31-68 (340)
109 2rcy_A Pyrroline carboxylate r 92.1 0.77 2.6E-05 41.7 9.8 92 128-247 4-95 (262)
110 1ur5_A Malate dehydrogenase; o 92.0 0.098 3.4E-06 50.3 3.8 100 129-246 3-122 (309)
111 3kkj_A Amine oxidase, flavin-c 92.0 0.15 5.1E-06 42.9 4.5 31 130-172 4-34 (336)
112 2d4a_B Malate dehydrogenase; a 91.9 0.13 4.4E-06 49.6 4.4 108 130-258 1-128 (308)
113 1x7d_A Ornithine cyclodeaminas 91.8 0.25 8.6E-06 48.6 6.6 116 113-256 116-240 (350)
114 1wwk_A Phosphoglycerate dehydr 91.8 0.84 2.9E-05 43.8 10.1 122 95-245 88-234 (307)
115 1lld_A L-lactate dehydrogenase 91.6 0.13 4.5E-06 48.6 4.1 103 128-247 7-128 (319)
116 3jtm_A Formate dehydrogenase, 91.6 2.1 7.3E-05 42.1 13.0 170 95-297 108-307 (351)
117 3nep_X Malate dehydrogenase; h 91.6 0.12 4.2E-06 50.2 4.0 114 130-259 2-131 (314)
118 3ba1_A HPPR, hydroxyphenylpyru 91.6 1.3 4.6E-05 43.1 11.4 119 96-246 110-254 (333)
119 3evt_A Phosphoglycerate dehydr 91.5 0.55 1.9E-05 45.8 8.5 188 95-324 83-300 (324)
120 3i83_A 2-dehydropantoate 2-red 91.4 0.31 1.1E-05 46.5 6.6 102 129-247 3-109 (320)
121 1lu9_A Methylene tetrahydromet 91.4 0.89 3E-05 42.5 9.6 119 77-218 63-198 (287)
122 4huj_A Uncharacterized protein 91.3 0.34 1.2E-05 43.7 6.4 93 129-247 24-117 (220)
123 3gvi_A Malate dehydrogenase; N 91.2 0.17 5.8E-06 49.4 4.6 116 126-259 5-137 (324)
124 3ldh_A Lactate dehydrogenase; 91.2 0.064 2.2E-06 52.8 1.5 125 127-269 20-163 (330)
125 2zyd_A 6-phosphogluconate dehy 91.1 0.61 2.1E-05 47.7 8.8 101 126-246 13-116 (480)
126 3k96_A Glycerol-3-phosphate de 91.1 0.6 2E-05 45.8 8.4 100 128-247 29-137 (356)
127 3gt0_A Pyrroline-5-carboxylate 91.1 0.54 1.8E-05 42.9 7.6 98 129-247 3-101 (247)
128 4hy3_A Phosphoglycerate oxidor 91.0 1.4 4.7E-05 43.8 11.0 179 106-325 133-339 (365)
129 2j6i_A Formate dehydrogenase; 90.9 1.8 6E-05 42.7 11.7 146 75-246 87-260 (364)
130 2cuk_A Glycerate dehydrogenase 90.9 1.8 6E-05 41.7 11.4 118 95-246 87-232 (311)
131 2i99_A MU-crystallin homolog; 90.9 0.93 3.2E-05 43.3 9.3 113 113-253 122-237 (312)
132 2d0i_A Dehydrogenase; structur 90.8 2.8 9.5E-05 40.6 12.8 120 95-244 86-236 (333)
133 1nvt_A Shikimate 5'-dehydrogen 90.7 0.23 7.9E-06 46.8 4.9 60 99-172 99-159 (287)
134 3pqe_A L-LDH, L-lactate dehydr 90.7 0.14 4.9E-06 50.0 3.5 116 128-259 5-135 (326)
135 1omo_A Alanine dehydrogenase; 90.7 0.79 2.7E-05 44.2 8.7 114 113-256 112-231 (322)
136 4gsl_A Ubiquitin-like modifier 90.7 0.2 6.9E-06 53.2 4.8 38 125-173 323-360 (615)
137 3p7m_A Malate dehydrogenase; p 90.6 0.16 5.4E-06 49.5 3.7 116 127-259 4-135 (321)
138 1hye_A L-lactate/malate dehydr 90.6 0.17 5.6E-06 48.7 3.8 123 130-270 2-148 (313)
139 2dbq_A Glyoxylate reductase; D 90.6 2.2 7.7E-05 41.2 11.9 121 95-244 89-241 (334)
140 3k5p_A D-3-phosphoglycerate de 90.4 3.3 0.00011 41.9 13.3 192 95-325 102-322 (416)
141 3gvx_A Glycerate dehydrogenase 90.4 1.6 5.6E-05 41.8 10.6 174 107-325 85-281 (290)
142 4dgs_A Dehydrogenase; structur 90.3 2 6.8E-05 42.1 11.4 131 96-258 116-273 (340)
143 3phh_A Shikimate dehydrogenase 90.2 1 3.5E-05 42.9 8.9 100 113-245 107-212 (269)
144 3tl2_A Malate dehydrogenase; c 90.1 0.25 8.5E-06 48.0 4.6 117 126-259 6-140 (315)
145 2yq5_A D-isomer specific 2-hyd 90.1 3.4 0.00012 40.5 12.7 120 96-246 93-239 (343)
146 2x0j_A Malate dehydrogenase; o 89.8 0.31 1.1E-05 47.0 5.0 115 129-259 1-131 (294)
147 2w2k_A D-mandelate dehydrogena 89.7 3.6 0.00012 40.1 12.6 125 95-245 102-258 (348)
148 3hdj_A Probable ornithine cycl 89.7 1.4 4.9E-05 42.5 9.6 116 114-257 109-228 (313)
149 2raf_A Putative dinucleotide-b 89.6 0.84 2.9E-05 40.9 7.5 80 124-247 15-94 (209)
150 4fgw_A Glycerol-3-phosphate de 89.6 0.48 1.6E-05 47.6 6.3 97 129-234 35-141 (391)
151 1sc6_A PGDH, D-3-phosphoglycer 89.6 3.9 0.00013 41.0 12.9 194 94-325 90-311 (404)
152 1xdw_A NAD+-dependent (R)-2-hy 89.6 2.1 7.1E-05 41.5 10.7 138 76-245 73-236 (331)
153 3vh1_A Ubiquitin-like modifier 89.5 0.25 8.5E-06 52.4 4.3 38 124-172 323-360 (598)
154 1lss_A TRK system potassium up 89.1 0.46 1.6E-05 38.3 4.8 33 128-172 4-36 (140)
155 3hg7_A D-isomer specific 2-hyd 89.0 0.8 2.7E-05 44.7 7.3 188 95-326 88-303 (324)
156 4e21_A 6-phosphogluconate dehy 88.9 1.7 5.9E-05 42.7 9.7 96 126-246 20-118 (358)
157 1ks9_A KPA reductase;, 2-dehyd 88.8 0.71 2.4E-05 42.2 6.5 95 130-246 2-100 (291)
158 1x0v_A GPD-C, GPDH-C, glycerol 88.8 0.92 3.1E-05 43.2 7.5 109 128-247 8-128 (354)
159 3c85_A Putative glutathione-re 88.8 0.12 4E-06 44.8 1.1 36 125-172 36-72 (183)
160 1hyu_A AHPF, alkyl hydroperoxi 88.6 0.39 1.3E-05 48.9 5.0 98 60-172 136-244 (521)
161 2pi1_A D-lactate dehydrogenase 88.5 3.4 0.00012 40.2 11.5 139 95-265 86-250 (334)
162 3b1f_A Putative prephenate deh 88.5 0.88 3E-05 42.2 6.9 97 128-246 6-104 (290)
163 2ew2_A 2-dehydropantoate 2-red 88.5 0.28 9.4E-06 45.5 3.4 97 129-246 4-111 (316)
164 3ado_A Lambda-crystallin; L-gu 88.5 0.65 2.2E-05 45.3 6.2 33 128-172 6-38 (319)
165 1npy_A Hypothetical shikimate 88.2 0.67 2.3E-05 43.9 6.0 48 113-172 105-152 (271)
166 3k6j_A Protein F01G10.3, confi 88.0 0.83 2.8E-05 46.8 6.9 36 283-318 232-267 (460)
167 3gg9_A D-3-phosphoglycerate de 88.0 2.5 8.5E-05 41.6 10.1 192 95-325 97-325 (352)
168 1y7t_A Malate dehydrogenase; N 87.9 0.34 1.2E-05 46.4 3.8 110 129-246 5-133 (327)
169 4ej6_A Putative zinc-binding d 87.8 5.1 0.00017 38.7 12.2 136 102-267 158-308 (370)
170 3c24_A Putative oxidoreductase 87.8 1.2 4E-05 41.4 7.4 91 129-246 12-104 (286)
171 1qp8_A Formate dehydrogenase; 87.8 3.9 0.00013 39.2 11.2 118 94-244 70-211 (303)
172 4e5n_A Thermostable phosphite 87.8 3 0.0001 40.5 10.5 195 95-325 89-317 (330)
173 1f0y_A HCDH, L-3-hydroxyacyl-C 87.7 0.5 1.7E-05 44.4 4.8 32 129-172 16-47 (302)
174 3pp8_A Glyoxylate/hydroxypyruv 87.7 1.4 4.9E-05 42.6 8.1 209 76-325 63-301 (315)
175 2g76_A 3-PGDH, D-3-phosphoglyc 87.7 2.9 0.0001 40.7 10.4 121 96-245 112-257 (335)
176 2qrj_A Saccharopine dehydrogen 87.6 2.2 7.4E-05 43.0 9.5 82 128-243 214-300 (394)
177 3fi9_A Malate dehydrogenase; s 87.5 0.28 9.6E-06 48.3 3.0 117 126-259 6-139 (343)
178 2p4q_A 6-phosphogluconate dehy 87.4 1.6 5.5E-05 44.8 8.7 98 129-246 11-112 (497)
179 4aj2_A L-lactate dehydrogenase 87.4 0.28 9.5E-06 48.1 2.8 119 125-260 16-150 (331)
180 2nac_A NAD-dependent formate d 87.4 4.4 0.00015 40.5 11.7 124 95-245 135-285 (393)
181 2izz_A Pyrroline-5-carboxylate 87.3 1.8 6.3E-05 41.2 8.5 101 127-247 21-122 (322)
182 1bg6_A N-(1-D-carboxylethyl)-L 87.3 1.9 6.5E-05 40.8 8.6 93 129-244 5-110 (359)
183 3l6d_A Putative oxidoreductase 87.1 0.83 2.8E-05 43.3 5.9 36 125-172 6-41 (306)
184 1jay_A Coenzyme F420H2:NADP+ o 87.1 0.38 1.3E-05 42.4 3.3 95 130-247 2-101 (212)
185 2vns_A Metalloreductase steap3 87.0 0.68 2.3E-05 41.6 5.0 93 127-247 27-119 (215)
186 2h78_A Hibadh, 3-hydroxyisobut 86.9 1.1 3.8E-05 41.8 6.7 32 129-172 4-35 (302)
187 4dll_A 2-hydroxy-3-oxopropiona 86.7 1.1 3.9E-05 42.6 6.7 34 127-172 30-63 (320)
188 1j4a_A D-LDH, D-lactate dehydr 86.6 5.9 0.0002 38.3 11.8 123 94-246 91-238 (333)
189 1dxy_A D-2-hydroxyisocaproate 86.5 4.5 0.00015 39.2 10.9 121 95-246 90-236 (333)
190 1yj8_A Glycerol-3-phosphate de 86.4 0.87 3E-05 44.2 5.7 108 129-247 22-145 (375)
191 3vrd_B FCCB subunit, flavocyto 85.9 0.68 2.3E-05 44.6 4.7 35 128-172 2-36 (401)
192 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.7 1.4 4.8E-05 44.8 7.1 97 130-246 3-106 (478)
193 1y8q_A Ubiquitin-like 1 activa 85.5 0.63 2.1E-05 45.6 4.3 101 125-241 33-156 (346)
194 5mdh_A Malate dehydrogenase; o 85.5 0.4 1.4E-05 46.9 2.9 120 129-260 4-143 (333)
195 3abi_A Putative uncharacterize 85.5 0.39 1.3E-05 46.7 2.7 90 129-245 17-110 (365)
196 3kb6_A D-lactate dehydrogenase 85.5 6.8 0.00023 38.1 11.6 121 95-245 86-232 (334)
197 3pef_A 6-phosphogluconate dehy 85.5 1.1 3.7E-05 41.7 5.7 32 129-172 2-33 (287)
198 1hdo_A Biliverdin IX beta redu 85.3 2.1 7.3E-05 36.4 7.1 96 128-241 3-109 (206)
199 2iz1_A 6-phosphogluconate dehy 85.2 2.2 7.4E-05 43.3 8.2 99 128-246 5-106 (474)
200 4ina_A Saccharopine dehydrogen 84.9 1.4 4.7E-05 43.7 6.5 96 129-244 2-108 (405)
201 2pgd_A 6-phosphogluconate dehy 84.9 2.1 7.2E-05 43.5 7.9 98 129-246 3-104 (482)
202 2uyy_A N-PAC protein; long-cha 84.9 1.4 4.8E-05 41.4 6.2 32 129-172 31-62 (316)
203 4b4u_A Bifunctional protein fo 84.8 2.3 7.9E-05 41.5 7.8 91 108-242 159-250 (303)
204 3ef6_A Toluene 1,2-dioxygenase 84.7 1.4 4.9E-05 43.0 6.4 41 129-179 3-43 (410)
205 4hb9_A Similarities with proba 84.7 0.85 2.9E-05 43.1 4.7 32 129-172 2-33 (412)
206 2g5c_A Prephenate dehydrogenas 84.7 2.6 9.1E-05 38.7 7.9 96 129-246 2-99 (281)
207 3qsg_A NAD-binding phosphogluc 84.6 3.9 0.00013 38.8 9.2 34 128-172 24-57 (312)
208 3ip1_A Alcohol dehydrogenase, 84.6 6 0.00021 38.6 10.9 93 115-230 200-304 (404)
209 1tt5_B Ubiquitin-activating en 84.3 0.66 2.3E-05 47.1 3.9 38 124-172 36-73 (434)
210 3hhp_A Malate dehydrogenase; M 84.2 2.8 9.6E-05 40.5 8.2 103 130-246 2-121 (312)
211 3ggo_A Prephenate dehydrogenas 84.1 3.9 0.00013 39.1 9.1 94 128-243 33-128 (314)
212 3doj_A AT3G25530, dehydrogenas 83.9 1.9 6.5E-05 40.8 6.7 37 124-172 17-53 (310)
213 4gwg_A 6-phosphogluconate dehy 83.8 2.7 9.3E-05 43.2 8.3 99 128-246 4-106 (484)
214 2cvz_A Dehydrogenase, 3-hydrox 83.8 1.5 5.1E-05 40.2 5.8 30 130-172 3-32 (289)
215 3d1c_A Flavin-containing putat 83.7 1 3.6E-05 42.2 4.8 36 127-173 3-38 (369)
216 3cky_A 2-hydroxymethyl glutara 83.6 1.8 6.3E-05 40.0 6.4 32 129-172 5-36 (301)
217 1mx3_A CTBP1, C-terminal bindi 83.6 11 0.00037 36.9 12.1 190 95-324 107-333 (347)
218 3pdu_A 3-hydroxyisobutyrate de 83.6 1.5 5.3E-05 40.7 5.8 32 129-172 2-33 (287)
219 1yb4_A Tartronic semialdehyde 83.3 2.2 7.6E-05 39.3 6.8 30 129-170 4-33 (295)
220 1y8q_B Anthracycline-, ubiquit 83.2 1.2 4.1E-05 47.5 5.5 38 125-173 14-51 (640)
221 1gdh_A D-glycerate dehydrogena 83.2 8.3 0.00028 37.0 11.1 122 95-244 89-239 (320)
222 3e8x_A Putative NAD-dependent 83.2 2.1 7.3E-05 37.9 6.4 98 124-243 17-131 (236)
223 3hn2_A 2-dehydropantoate 2-red 83.1 1.5 5.3E-05 41.4 5.7 101 129-247 3-107 (312)
224 3fwz_A Inner membrane protein 82.9 0.54 1.8E-05 39.2 2.2 32 129-172 8-39 (140)
225 3klj_A NAD(FAD)-dependent dehy 82.8 1.2 4E-05 43.7 4.9 74 127-216 8-84 (385)
226 4a9w_A Monooxygenase; baeyer-v 82.7 1.2 4E-05 41.1 4.6 35 127-173 2-36 (357)
227 4ezb_A Uncharacterized conserv 82.5 2.8 9.6E-05 40.0 7.3 33 129-172 25-57 (317)
228 3fg2_P Putative rubredoxin red 82.4 1.4 4.7E-05 42.8 5.2 41 129-179 2-42 (404)
229 3f8d_A Thioredoxin reductase ( 82.1 1.4 4.9E-05 40.0 5.0 33 128-172 15-47 (323)
230 2f1k_A Prephenate dehydrogenas 82.1 3.5 0.00012 37.7 7.6 31 130-172 2-32 (279)
231 1vpd_A Tartronate semialdehyde 82.1 1.8 6.2E-05 40.0 5.7 32 129-172 6-37 (299)
232 3fbs_A Oxidoreductase; structu 81.6 1.4 4.8E-05 39.7 4.6 32 129-172 3-34 (297)
233 3qha_A Putative oxidoreductase 81.3 4.2 0.00014 38.1 8.0 33 128-172 15-47 (296)
234 3lxd_A FAD-dependent pyridine 81.3 1.6 5.6E-05 42.4 5.3 43 127-179 8-50 (415)
235 3lzw_A Ferredoxin--NADP reduct 80.6 1.5 5.1E-05 40.2 4.5 33 128-172 7-39 (332)
236 2zbw_A Thioredoxin reductase; 80.6 1.6 5.3E-05 40.5 4.6 34 128-173 5-38 (335)
237 2jae_A L-amino acid oxidase; o 80.3 1.4 4.6E-05 43.7 4.4 42 121-174 4-45 (489)
238 3oz2_A Digeranylgeranylglycero 80.1 1.5 5.3E-05 40.8 4.5 31 130-172 6-36 (397)
239 3alj_A 2-methyl-3-hydroxypyrid 80.0 1.7 5.7E-05 41.5 4.8 38 125-174 8-45 (379)
240 3r6d_A NAD-dependent epimerase 79.9 1.3 4.6E-05 38.8 3.8 94 129-241 6-106 (221)
241 1i36_A Conserved hypothetical 79.8 4.1 0.00014 36.9 7.2 30 130-171 2-31 (264)
242 1ygy_A PGDH, D-3-phosphoglycer 79.3 11 0.00038 38.7 11.0 121 95-244 88-233 (529)
243 4egb_A DTDP-glucose 4,6-dehydr 79.1 4.7 0.00016 37.5 7.5 106 126-243 22-149 (346)
244 2xdo_A TETX2 protein; tetracyc 79.1 2 6.9E-05 41.3 5.1 36 126-173 24-59 (398)
245 2q7v_A Thioredoxin reductase; 79.0 1.8 6.1E-05 40.1 4.5 33 128-172 8-40 (325)
246 3l4b_C TRKA K+ channel protien 78.9 1.8 6.1E-05 38.4 4.3 92 130-244 2-100 (218)
247 3g0o_A 3-hydroxyisobutyrate de 78.8 1.7 5.7E-05 40.9 4.3 33 128-172 7-39 (303)
248 3dme_A Conserved exported prot 78.7 2.1 7.1E-05 39.7 4.9 33 128-172 4-36 (369)
249 2yjz_A Metalloreductase steap4 80.0 0.41 1.4E-05 43.0 0.0 92 126-246 17-108 (201)
250 3itj_A Thioredoxin reductase 1 78.5 1.6 5.4E-05 40.1 3.9 33 128-172 22-54 (338)
251 2pv7_A T-protein [includes: ch 78.2 7.4 0.00025 36.5 8.6 32 129-172 22-54 (298)
252 3gpi_A NAD-dependent epimerase 78.1 2.1 7.2E-05 39.0 4.6 96 127-243 2-109 (286)
253 3nix_A Flavoprotein/dehydrogen 78.1 3 0.0001 40.0 5.9 35 128-174 5-39 (421)
254 2ahr_A Putative pyrroline carb 78.0 2.7 9.1E-05 38.2 5.3 90 129-246 4-93 (259)
255 3pid_A UDP-glucose 6-dehydroge 78.0 11 0.00037 38.2 10.2 121 119-258 27-189 (432)
256 4eqs_A Coenzyme A disulfide re 78.0 2 6.8E-05 42.6 4.7 35 130-174 2-36 (437)
257 3hwr_A 2-dehydropantoate 2-red 77.8 2.1 7.3E-05 40.6 4.8 101 125-247 16-124 (318)
258 3cty_A Thioredoxin reductase; 77.8 2.1 7.3E-05 39.4 4.6 33 128-172 16-48 (319)
259 1ryi_A Glycine oxidase; flavop 77.8 2.2 7.6E-05 40.2 4.8 36 127-174 16-51 (382)
260 2ywl_A Thioredoxin reductase r 77.7 2.4 8.3E-05 35.8 4.6 32 129-172 2-33 (180)
261 3rp8_A Flavoprotein monooxygen 77.4 2.2 7.6E-05 41.0 4.8 36 126-173 21-56 (407)
262 3cgv_A Geranylgeranyl reductas 77.4 2 6.8E-05 40.6 4.4 36 127-174 3-38 (397)
263 2qyt_A 2-dehydropantoate 2-red 77.3 3.2 0.00011 38.4 5.7 103 129-246 9-120 (317)
264 3k7m_X 6-hydroxy-L-nicotine ox 77.3 2.3 8E-05 40.9 4.9 33 129-173 2-34 (431)
265 3dhn_A NAD-dependent epimerase 77.2 3.8 0.00013 35.7 5.9 94 129-241 5-110 (227)
266 2vou_A 2,6-dihydroxypyridine h 77.0 2.6 8.8E-05 40.6 5.1 35 127-173 4-38 (397)
267 2ph5_A Homospermidine synthase 76.8 6.6 0.00022 40.6 8.3 98 128-244 13-115 (480)
268 3axb_A Putative oxidoreductase 76.7 2.5 8.4E-05 41.3 4.9 36 125-171 20-55 (448)
269 2z2v_A Hypothetical protein PH 76.6 1.4 4.7E-05 43.3 3.1 118 127-275 15-137 (365)
270 2nvu_B Maltose binding protein 76.6 1.7 5.7E-05 46.8 4.0 37 126-173 409-445 (805)
271 3grf_A Ornithine carbamoyltran 76.6 7.4 0.00025 38.1 8.3 123 76-214 104-240 (328)
272 2gf3_A MSOX, monomeric sarcosi 76.5 2.5 8.4E-05 39.9 4.8 36 128-175 3-38 (389)
273 1y56_B Sarcosine oxidase; dehy 76.5 2.2 7.6E-05 40.3 4.4 34 128-173 5-38 (382)
274 2x3n_A Probable FAD-dependent 76.3 2.4 8.2E-05 40.6 4.7 34 128-173 6-39 (399)
275 2q0l_A TRXR, thioredoxin reduc 76.3 2.5 8.7E-05 38.6 4.7 33 129-172 2-34 (311)
276 3ab1_A Ferredoxin--NADP reduct 76.2 2.6 9E-05 39.6 4.9 35 127-173 13-47 (360)
277 3s2u_A UDP-N-acetylglucosamine 76.0 3.4 0.00012 39.7 5.7 42 200-245 84-125 (365)
278 3iwa_A FAD-dependent pyridine 75.8 2 6.8E-05 42.6 4.1 38 128-175 3-40 (472)
279 3h8l_A NADH oxidase; membrane 75.8 2.2 7.6E-05 41.2 4.3 37 129-174 2-38 (409)
280 2uzz_A N-methyl-L-tryptophan o 75.7 2.6 8.7E-05 39.6 4.6 35 129-175 3-37 (372)
281 1trb_A Thioredoxin reductase; 75.6 2.2 7.5E-05 39.1 4.0 34 127-172 4-37 (320)
282 1c0p_A D-amino acid oxidase; a 75.4 3 0.0001 39.4 5.0 34 128-173 6-39 (363)
283 2gv8_A Monooxygenase; FMO, FAD 75.3 2.7 9.4E-05 41.3 4.9 36 127-172 5-40 (447)
284 1xhc_A NADH oxidase /nitrite r 75.2 2.6 8.9E-05 40.7 4.6 39 128-179 8-46 (367)
285 1zk7_A HGII, reductase, mercur 75.2 2.7 9.3E-05 41.6 4.9 33 128-172 4-36 (467)
286 3hyw_A Sulfide-quinone reducta 75.2 2.3 7.8E-05 41.9 4.3 34 129-172 3-36 (430)
287 1zej_A HBD-9, 3-hydroxyacyl-CO 75.2 2.6 8.8E-05 40.4 4.5 33 127-172 11-43 (293)
288 3llv_A Exopolyphosphatase-rela 75.2 2.9 9.9E-05 34.2 4.3 34 127-172 5-38 (141)
289 1vdc_A NTR, NADPH dependent th 75.1 2 6.8E-05 39.7 3.6 33 127-171 7-39 (333)
290 2bka_A CC3, TAT-interacting pr 74.8 9 0.00031 33.6 7.7 102 126-243 16-132 (242)
291 2oln_A NIKD protein; flavoprot 74.6 2.9 0.0001 39.8 4.8 36 128-175 4-39 (397)
292 2gf2_A Hibadh, 3-hydroxyisobut 74.6 4.6 0.00016 37.2 6.0 31 130-172 2-32 (296)
293 3ic5_A Putative saccharopine d 74.5 3.9 0.00013 31.6 4.7 84 127-232 4-91 (118)
294 2gqw_A Ferredoxin reductase; f 74.5 2.9 9.9E-05 40.8 4.8 42 128-179 7-48 (408)
295 1dlj_A UDP-glucose dehydrogena 74.5 5.4 0.00018 39.4 6.8 30 130-172 2-31 (402)
296 1yvv_A Amine oxidase, flavin-c 74.2 2.9 9.8E-05 38.6 4.5 33 129-173 3-35 (336)
297 3c96_A Flavin-containing monoo 74.0 3.1 0.00011 40.2 4.8 35 128-173 4-38 (410)
298 4gcm_A TRXR, thioredoxin reduc 73.6 3 0.0001 38.4 4.4 32 129-172 7-38 (312)
299 3ka7_A Oxidoreductase; structu 73.5 3.3 0.00011 39.7 4.9 33 130-174 2-34 (425)
300 2pzm_A Putative nucleotide sug 73.5 7.6 0.00026 36.1 7.2 103 124-243 16-136 (330)
301 2gag_B Heterotetrameric sarcos 73.2 3.4 0.00012 39.1 4.8 37 128-174 21-57 (405)
302 2r9z_A Glutathione amide reduc 73.2 3.2 0.00011 41.3 4.8 33 128-172 4-36 (463)
303 4g6h_A Rotenone-insensitive NA 73.1 2.1 7.2E-05 43.5 3.5 32 129-172 43-74 (502)
304 3r9u_A Thioredoxin reductase; 73.0 3.2 0.00011 37.6 4.4 33 128-172 4-37 (315)
305 3nrn_A Uncharacterized protein 73.0 3.4 0.00012 39.9 4.8 33 130-174 2-34 (421)
306 2dq4_A L-threonine 3-dehydroge 72.7 5.1 0.00017 38.0 5.9 106 104-231 142-253 (343)
307 2eq6_A Pyruvate dehydrogenase 72.7 3.1 0.00011 41.3 4.6 35 127-173 5-39 (464)
308 2hqm_A GR, grase, glutathione 72.7 3.1 0.00011 41.5 4.6 35 127-173 10-44 (479)
309 1ges_A Glutathione reductase; 72.6 3.2 0.00011 41.0 4.6 33 128-172 4-36 (450)
310 3uox_A Otemo; baeyer-villiger 72.4 3.5 0.00012 42.4 5.0 35 127-173 8-42 (545)
311 3m6i_A L-arabinitol 4-dehydrog 72.3 7.2 0.00025 37.2 6.9 59 101-171 154-212 (363)
312 3urh_A Dihydrolipoyl dehydroge 72.1 3.2 0.00011 41.4 4.5 34 128-173 25-58 (491)
313 1tt5_A APPBP1, amyloid protein 72.0 1.9 6.5E-05 44.8 2.9 102 124-241 28-155 (531)
314 1fl2_A Alkyl hydroperoxide red 72.0 3.9 0.00013 37.3 4.8 32 129-172 2-33 (310)
315 3dje_A Fructosyl amine: oxygen 71.8 3.4 0.00012 40.1 4.5 37 128-175 6-42 (438)
316 3i6i_A Putative leucoanthocyan 71.8 1.8 6.1E-05 40.8 2.4 103 126-240 8-117 (346)
317 3v76_A Flavoprotein; structura 71.8 3.2 0.00011 41.2 4.4 36 127-174 26-61 (417)
318 2qae_A Lipoamide, dihydrolipoy 71.7 3.7 0.00013 40.6 4.8 34 128-173 2-35 (468)
319 2cul_A Glucose-inhibited divis 71.6 3.6 0.00012 36.8 4.4 33 128-172 3-35 (232)
320 3i3l_A Alkylhalidase CMLS; fla 71.6 5.4 0.00019 41.5 6.3 37 126-174 21-57 (591)
321 3qj4_A Renalase; FAD/NAD(P)-bi 71.6 3.4 0.00011 38.7 4.3 35 129-172 2-36 (342)
322 3slg_A PBGP3 protein; structur 71.3 13 0.00043 35.0 8.3 101 125-243 21-141 (372)
323 2vdc_G Glutamate synthase [NAD 71.2 3.7 0.00013 41.2 4.8 34 127-172 121-154 (456)
324 2xve_A Flavin-containing monoo 71.2 3.6 0.00012 41.1 4.7 38 129-172 3-40 (464)
325 1q1r_A Putidaredoxin reductase 71.2 4.2 0.00014 40.0 5.1 38 128-175 4-41 (431)
326 2a8x_A Dihydrolipoyl dehydroge 71.1 3.6 0.00012 40.7 4.6 33 128-172 3-35 (464)
327 3gg2_A Sugar dehydrogenase, UD 71.0 10 0.00035 38.2 8.0 32 129-172 3-34 (450)
328 4ep1_A Otcase, ornithine carba 71.0 20 0.00067 35.4 9.8 105 96-218 147-257 (340)
329 4ap3_A Steroid monooxygenase; 70.9 3.7 0.00013 42.2 4.8 35 127-173 20-54 (549)
330 2a87_A TRXR, TR, thioredoxin r 70.8 3.4 0.00012 38.5 4.2 34 127-172 13-46 (335)
331 2v3a_A Rubredoxin reductase; a 70.7 3.9 0.00013 39.3 4.6 35 128-172 4-38 (384)
332 1mo9_A ORF3; nucleotide bindin 70.7 3.5 0.00012 41.8 4.5 35 127-173 42-76 (523)
333 4h7p_A Malate dehydrogenase; s 70.6 4.2 0.00014 40.0 4.9 115 125-246 21-153 (345)
334 3h28_A Sulfide-quinone reducta 70.6 3.9 0.00013 40.0 4.7 36 129-174 3-38 (430)
335 2yqu_A 2-oxoglutarate dehydrog 70.5 4 0.00014 40.2 4.7 33 129-173 2-34 (455)
336 1id1_A Putative potassium chan 70.3 4.8 0.00016 33.5 4.6 34 127-172 2-35 (153)
337 4id9_A Short-chain dehydrogena 70.2 8.9 0.00031 35.6 6.9 96 124-243 15-126 (347)
338 1zmd_A Dihydrolipoyl dehydroge 70.2 3.8 0.00013 40.6 4.5 34 128-173 6-39 (474)
339 1pl8_A Human sorbitol dehydrog 70.2 9.6 0.00033 36.3 7.3 57 103-171 148-204 (356)
340 3kd9_A Coenzyme A disulfide re 70.0 3.9 0.00013 40.2 4.5 37 128-174 3-39 (449)
341 3ics_A Coenzyme A-disulfide re 69.9 3.8 0.00013 41.9 4.6 39 127-175 35-73 (588)
342 2d8a_A PH0655, probable L-thre 69.8 5.2 0.00018 38.0 5.3 55 104-171 146-200 (348)
343 4a5l_A Thioredoxin reductase; 69.7 3.4 0.00012 37.6 3.8 32 129-172 5-36 (314)
344 1pqw_A Polyketide synthase; ro 69.6 13 0.00043 32.0 7.3 58 103-172 13-72 (198)
345 3oc4_A Oxidoreductase, pyridin 69.6 3.7 0.00012 40.5 4.3 37 129-175 3-39 (452)
346 2qa2_A CABE, polyketide oxygen 69.5 4.3 0.00015 41.0 4.8 34 127-172 11-44 (499)
347 3c4a_A Probable tryptophan hyd 69.5 3.8 0.00013 39.2 4.3 34 130-173 2-35 (381)
348 3ihg_A RDME; flavoenzyme, anth 69.5 4.4 0.00015 40.8 4.9 35 127-173 4-38 (535)
349 2zcu_A Uncharacterized oxidore 69.2 4.4 0.00015 36.4 4.4 98 130-243 1-104 (286)
350 3gwf_A Cyclohexanone monooxyge 69.2 4.1 0.00014 41.9 4.6 36 127-173 7-42 (540)
351 1ebd_A E3BD, dihydrolipoamide 69.0 3.7 0.00013 40.5 4.1 32 129-172 4-35 (455)
352 3c4n_A Uncharacterized protein 69.0 4.1 0.00014 39.4 4.4 36 128-173 36-71 (405)
353 3nks_A Protoporphyrinogen oxid 68.7 4.9 0.00017 39.2 5.0 34 129-172 3-36 (477)
354 3lk7_A UDP-N-acetylmuramoylala 68.6 4.6 0.00016 40.4 4.8 36 125-172 6-41 (451)
355 2bi7_A UDP-galactopyranose mut 68.6 4.8 0.00017 39.1 4.8 33 128-172 3-35 (384)
356 1v59_A Dihydrolipoamide dehydr 68.4 4.5 0.00015 40.1 4.6 34 128-173 5-38 (478)
357 1k0i_A P-hydroxybenzoate hydro 68.4 4.6 0.00016 38.4 4.6 33 129-173 3-35 (394)
358 1rp0_A ARA6, thiazole biosynth 68.4 5 0.00017 37.1 4.7 36 127-174 38-74 (284)
359 3e48_A Putative nucleoside-dip 68.4 7.3 0.00025 35.3 5.7 97 130-243 2-106 (289)
360 1dxl_A Dihydrolipoamide dehydr 68.3 4.7 0.00016 39.7 4.7 33 128-172 6-38 (470)
361 4gbj_A 6-phosphogluconate dehy 68.3 7.7 0.00026 36.7 6.0 91 129-246 6-100 (297)
362 1onf_A GR, grase, glutathione 67.9 4.2 0.00014 40.8 4.4 33 129-173 3-35 (500)
363 3o0h_A Glutathione reductase; 67.8 5.2 0.00018 39.9 5.0 33 128-172 26-58 (484)
364 3ktd_A Prephenate dehydrogenas 67.8 7.3 0.00025 38.0 5.9 90 129-242 9-100 (341)
365 2q1w_A Putative nucleotide sug 67.8 13 0.00044 34.6 7.5 103 126-243 19-137 (333)
366 3ntd_A FAD-dependent pyridine 67.7 4.5 0.00015 40.8 4.6 37 129-175 2-38 (565)
367 3cgb_A Pyridine nucleotide-dis 67.6 4.3 0.00015 40.5 4.3 37 129-175 37-73 (480)
368 3s5w_A L-ornithine 5-monooxyge 67.6 4.1 0.00014 39.8 4.1 39 128-174 30-69 (463)
369 3e1t_A Halogenase; flavoprotei 67.5 4.5 0.00015 40.7 4.5 35 127-173 6-40 (512)
370 1mv8_A GMD, GDP-mannose 6-dehy 67.4 14 0.00046 36.8 7.9 31 130-172 2-32 (436)
371 2yy7_A L-threonine dehydrogena 67.4 5 0.00017 36.6 4.4 99 129-243 3-118 (312)
372 3tpf_A Otcase, ornithine carba 67.3 33 0.0011 33.2 10.3 135 59-216 81-222 (307)
373 2z1m_A GDP-D-mannose dehydrata 67.3 9.5 0.00032 35.1 6.3 101 127-243 2-127 (345)
374 2qa1_A PGAE, polyketide oxygen 67.2 4.5 0.00015 40.9 4.4 36 125-172 8-43 (500)
375 3m2p_A UDP-N-acetylglucosamine 67.0 15 0.00052 33.6 7.7 93 129-243 3-109 (311)
376 1w4x_A Phenylacetone monooxyge 67.0 5.1 0.00017 40.7 4.8 35 127-173 15-49 (542)
377 3l8k_A Dihydrolipoyl dehydroge 67.0 5 0.00017 39.8 4.7 34 128-173 4-37 (466)
378 2weu_A Tryptophan 5-halogenase 66.9 4.1 0.00014 40.7 4.0 37 129-174 3-39 (511)
379 3nrc_A Enoyl-[acyl-carrier-pro 66.9 8.6 0.00029 35.2 6.0 78 125-219 23-114 (280)
380 1s3e_A Amine oxidase [flavin-c 66.9 5.1 0.00017 40.1 4.7 34 128-173 4-37 (520)
381 3cmm_A Ubiquitin-activating en 66.8 4.5 0.00015 45.4 4.6 104 124-242 23-146 (1015)
382 1m6i_A Programmed cell death p 66.8 4.8 0.00016 40.5 4.5 39 127-175 10-48 (493)
383 3ihm_A Styrene monooxygenase A 66.7 5 0.00017 39.4 4.6 33 129-173 23-55 (430)
384 4fk1_A Putative thioredoxin re 66.7 5.2 0.00018 36.8 4.4 34 127-172 5-38 (304)
385 3csu_A Protein (aspartate carb 66.6 55 0.0019 31.6 11.8 126 68-217 96-230 (310)
386 3fpz_A Thiazole biosynthetic e 66.6 5.1 0.00017 37.5 4.4 37 126-172 63-99 (326)
387 2cdu_A NADPH oxidase; flavoenz 66.5 4.6 0.00016 39.7 4.2 34 130-173 2-35 (452)
388 2e1m_A L-glutamate oxidase; L- 66.4 5.8 0.0002 39.2 4.9 35 126-172 42-76 (376)
389 2vvm_A Monoamine oxidase N; FA 66.4 5.8 0.0002 39.1 5.0 32 129-172 40-71 (495)
390 2yg5_A Putrescine oxidase; oxi 66.4 5.4 0.00018 38.7 4.6 35 127-173 4-38 (453)
391 3k30_A Histamine dehydrogenase 66.4 5.6 0.00019 41.8 5.1 34 128-173 391-424 (690)
392 1rsg_A FMS1 protein; FAD bindi 66.4 5.3 0.00018 40.0 4.7 23 126-148 6-28 (516)
393 2gqf_A Hypothetical protein HI 66.3 4.3 0.00015 39.9 3.9 35 128-174 4-38 (401)
394 2wpf_A Trypanothione reductase 66.2 6.3 0.00022 39.6 5.3 32 128-170 7-38 (495)
395 1ojt_A Surface protein; redox- 66.2 5.3 0.00018 39.8 4.7 34 128-173 6-39 (482)
396 3nyc_A D-arginine dehydrogenas 66.1 4.4 0.00015 37.8 3.8 34 127-173 8-41 (381)
397 1nhp_A NADH peroxidase; oxidor 66.0 4.8 0.00016 39.5 4.3 35 130-174 2-36 (447)
398 2aqj_A Tryptophan halogenase, 65.9 5.6 0.00019 40.2 4.8 37 128-173 5-41 (538)
399 4gde_A UDP-galactopyranose mut 65.8 5.5 0.00019 39.1 4.7 34 128-172 10-43 (513)
400 2bry_A NEDD9 interacting prote 65.8 5.6 0.00019 40.1 4.8 37 127-175 91-127 (497)
401 3sx6_A Sulfide-quinone reducta 65.6 6.1 0.00021 38.7 4.9 36 129-173 5-40 (437)
402 1xdi_A RV3303C-LPDA; reductase 65.5 4.6 0.00016 40.5 4.1 36 129-173 3-38 (499)
403 2e4g_A Tryptophan halogenase; 65.5 5.7 0.00019 40.5 4.8 39 127-174 24-62 (550)
404 2qcu_A Aerobic glycerol-3-phos 65.4 5.4 0.00018 40.1 4.6 34 128-173 3-36 (501)
405 7mdh_A Protein (malate dehydro 65.2 4.8 0.00016 40.2 4.1 119 128-259 32-171 (375)
406 2bc0_A NADH oxidase; flavoprot 65.1 5.9 0.0002 39.6 4.8 37 128-173 35-71 (490)
407 3atr_A Conserved archaeal prot 65.0 4.3 0.00015 39.9 3.7 35 128-174 6-40 (453)
408 4b8w_A GDP-L-fucose synthase; 64.8 11 0.00037 33.9 6.1 92 125-243 3-113 (319)
409 4dna_A Probable glutathione re 64.6 6.6 0.00023 38.8 5.0 33 128-172 5-37 (463)
410 1e6u_A GDP-fucose synthetase; 64.6 12 0.00043 34.1 6.6 87 128-243 3-107 (321)
411 3dfz_A SIRC, precorrin-2 dehyd 64.5 6.9 0.00024 36.1 4.7 36 125-172 28-63 (223)
412 1o94_A Tmadh, trimethylamine d 64.4 6 0.0002 42.1 4.9 34 128-173 389-422 (729)
413 1yqd_A Sinapyl alcohol dehydro 64.4 14 0.00049 35.4 7.2 49 111-171 171-219 (366)
414 2pyx_A Tryptophan halogenase; 64.3 6.2 0.00021 39.8 4.8 39 127-173 6-52 (526)
415 3qvo_A NMRA family protein; st 64.1 14 0.00047 32.7 6.6 101 126-243 21-125 (236)
416 3dk9_A Grase, GR, glutathione 64.0 5.3 0.00018 39.6 4.2 34 127-172 19-52 (478)
417 3g3e_A D-amino-acid oxidase; F 63.9 6.6 0.00023 36.7 4.6 38 130-173 2-39 (351)
418 2ivd_A PPO, PPOX, protoporphyr 63.8 6 0.00021 38.7 4.5 34 128-173 16-49 (478)
419 4a7p_A UDP-glucose dehydrogena 63.7 17 0.00057 36.8 7.8 91 128-240 8-125 (446)
420 1v0j_A UDP-galactopyranose mut 63.7 5.7 0.00019 38.7 4.2 34 128-172 7-40 (399)
421 3fpc_A NADP-dependent alcohol 63.7 8.2 0.00028 36.7 5.3 49 111-171 151-199 (352)
422 2x4g_A Nucleoside-diphosphate- 63.6 15 0.0005 33.9 6.9 97 129-243 14-126 (342)
423 1lvl_A Dihydrolipoamide dehydr 63.5 5.5 0.00019 39.4 4.2 33 128-172 5-37 (458)
424 3ek2_A Enoyl-(acyl-carrier-pro 63.4 7.4 0.00025 34.9 4.7 81 123-219 9-103 (271)
425 2o7s_A DHQ-SDH PR, bifunctiona 63.3 8.3 0.00028 39.5 5.6 36 125-172 361-396 (523)
426 4dgk_A Phytoene dehydrogenase; 63.3 5.8 0.0002 39.1 4.3 20 129-148 2-21 (501)
427 2i0z_A NAD(FAD)-utilizing dehy 63.2 5.9 0.0002 39.1 4.3 33 129-173 27-59 (447)
428 1n2s_A DTDP-4-, DTDP-glucose o 63.2 9.9 0.00034 34.4 5.5 86 130-243 2-104 (299)
429 2r0c_A REBC; flavin adenine di 63.1 6.1 0.00021 40.3 4.5 34 127-172 25-58 (549)
430 3lad_A Dihydrolipoamide dehydr 62.9 6.6 0.00023 38.8 4.6 33 128-172 3-35 (476)
431 4ekn_B Aspartate carbamoyltran 62.8 62 0.0021 31.2 11.3 134 59-218 86-228 (306)
432 2wm3_A NMRA-like family domain 62.8 3.3 0.00011 37.9 2.2 99 128-244 5-115 (299)
433 3k13_A 5-methyltetrahydrofolat 62.3 13 0.00046 35.8 6.5 71 68-171 102-179 (300)
434 2b9w_A Putative aminooxidase; 62.2 7.1 0.00024 37.5 4.6 36 127-173 5-40 (424)
435 3pvc_A TRNA 5-methylaminomethy 62.1 6.1 0.00021 41.5 4.4 33 129-173 265-297 (689)
436 1i8t_A UDP-galactopyranose mut 62.1 7.4 0.00025 37.5 4.7 32 129-172 2-33 (367)
437 3ps9_A TRNA 5-methylaminomethy 62.1 7 0.00024 40.8 4.9 33 129-173 273-305 (676)
438 1ps9_A 2,4-dienoyl-COA reducta 62.1 7 0.00024 40.9 4.9 34 128-173 373-406 (671)
439 3i6d_A Protoporphyrinogen oxid 62.0 6.6 0.00023 37.9 4.3 39 128-172 5-43 (470)
440 1lqt_A FPRA; NADP+ derivative, 61.9 6.1 0.00021 39.5 4.2 37 128-172 3-42 (456)
441 2bcg_G Secretory pathway GDP d 61.7 6.8 0.00023 38.8 4.4 37 127-175 10-46 (453)
442 3lov_A Protoporphyrinogen oxid 61.5 9.5 0.00032 37.3 5.4 36 128-173 4-39 (475)
443 3ic9_A Dihydrolipoamide dehydr 61.4 7.1 0.00024 39.1 4.6 32 129-172 9-40 (492)
444 3hdq_A UDP-galactopyranose mut 61.3 7.9 0.00027 38.4 4.9 34 127-172 28-61 (397)
445 1zq6_A Otcase, ornithine carba 61.1 44 0.0015 33.1 10.1 116 83-217 145-274 (359)
446 2c5a_A GDP-mannose-3', 5'-epim 61.1 29 0.00098 33.0 8.6 99 127-243 28-145 (379)
447 4a2c_A Galactitol-1-phosphate 61.1 24 0.00084 33.0 8.1 58 102-171 136-193 (346)
448 1gte_A Dihydropyrimidine dehyd 61.0 6.4 0.00022 43.7 4.5 34 128-172 187-220 (1025)
449 2zb4_A Prostaglandin reductase 60.8 18 0.00061 34.3 7.1 56 106-172 137-195 (357)
450 2x5o_A UDP-N-acetylmuramoylala 60.7 6.4 0.00022 39.1 4.1 36 126-173 3-38 (439)
451 3dqp_A Oxidoreductase YLBE; al 60.7 21 0.00072 30.8 7.0 93 130-242 2-105 (219)
452 3ew7_A LMO0794 protein; Q8Y8U8 60.6 25 0.00086 29.9 7.5 91 130-243 2-103 (221)
453 3enk_A UDP-glucose 4-epimerase 60.5 24 0.00081 32.5 7.7 97 128-243 5-129 (341)
454 3ec7_A Putative dehydrogenase; 60.5 7.5 0.00026 37.4 4.4 96 126-240 21-116 (357)
455 1wdk_A Fatty oxidation complex 60.2 5.7 0.00019 42.5 3.8 36 125-172 311-346 (715)
456 3vtz_A Glucose 1-dehydrogenase 59.8 21 0.0007 32.6 7.1 77 123-218 9-91 (269)
457 3i1j_A Oxidoreductase, short c 59.7 19 0.00066 31.7 6.7 37 124-172 10-47 (247)
458 1y0p_A Fumarate reductase flav 59.7 8.8 0.0003 39.2 5.0 40 124-175 122-161 (571)
459 1fec_A Trypanothione reductase 59.6 9.6 0.00033 38.2 5.2 32 128-170 3-34 (490)
460 1vl0_A DTDP-4-dehydrorhamnose 59.3 13 0.00046 33.5 5.7 88 125-243 9-113 (292)
461 1e3j_A NADP(H)-dependent ketos 59.1 18 0.00061 34.3 6.8 56 103-171 145-200 (352)
462 2jl1_A Triphenylmethane reduct 58.9 5.8 0.0002 35.8 3.1 98 130-243 2-107 (287)
463 3ehe_A UDP-glucose 4-epimerase 58.9 27 0.00091 31.8 7.7 94 130-243 3-114 (313)
464 1wly_A CAAR, 2-haloacrylate re 58.9 19 0.00066 33.7 6.9 52 109-172 127-179 (333)
465 2dkh_A 3-hydroxybenzoate hydro 58.6 7.8 0.00027 40.4 4.4 33 128-172 32-65 (639)
466 2x8g_A Thioredoxin glutathione 58.5 8.6 0.0003 39.4 4.7 33 127-171 106-138 (598)
467 3cmm_A Ubiquitin-activating en 58.4 6.8 0.00023 43.9 4.1 43 125-173 422-464 (1015)
468 2rgh_A Alpha-glycerophosphate 58.3 8.6 0.00029 39.6 4.7 34 128-173 32-65 (571)
469 3da1_A Glycerol-3-phosphate de 58.3 8.5 0.00029 39.5 4.6 34 127-172 17-50 (561)
470 1cjc_A Protein (adrenodoxin re 58.1 9.8 0.00034 38.0 4.9 35 128-172 6-40 (460)
471 3sds_A Ornithine carbamoyltran 58.0 63 0.0022 31.9 10.6 145 85-256 133-320 (353)
472 2q1s_A Putative nucleotide sug 58.0 14 0.00047 35.1 5.8 103 125-243 29-151 (377)
473 1sez_A Protoporphyrinogen oxid 57.9 9.5 0.00033 37.6 4.8 33 128-172 13-45 (504)
474 1hxh_A 3BETA/17BETA-hydroxyste 57.8 13 0.00046 33.3 5.4 36 125-172 3-39 (253)
475 1kyq_A Met8P, siroheme biosynt 57.7 8.3 0.00028 36.7 4.1 36 125-172 10-45 (274)
476 2dkn_A 3-alpha-hydroxysteroid 57.6 12 0.0004 32.9 4.9 68 130-219 3-73 (255)
477 2iid_A L-amino-acid oxidase; f 57.5 11 0.00039 37.0 5.2 33 128-172 33-65 (498)
478 4eez_A Alcohol dehydrogenase 1 57.4 18 0.00062 33.9 6.5 49 111-171 148-196 (348)
479 2i76_A Hypothetical protein; N 57.0 2.4 8.3E-05 39.3 0.2 19 129-147 3-21 (276)
480 3trj_A Phosphoheptose isomeras 56.9 14 0.00049 32.7 5.3 22 208-231 114-135 (201)
481 2cdc_A Glucose dehydrogenase g 56.7 30 0.001 33.0 8.0 33 128-172 181-213 (366)
482 1xq6_A Unknown protein; struct 56.6 8.7 0.0003 33.5 3.8 100 127-243 3-133 (253)
483 1uzm_A 3-oxoacyl-[acyl-carrier 56.5 26 0.0009 31.3 7.1 77 123-219 10-92 (247)
484 2q2v_A Beta-D-hydroxybutyrate 56.3 36 0.0012 30.4 8.0 35 126-172 2-37 (255)
485 1pj5_A N,N-dimethylglycine oxi 56.2 8.8 0.0003 41.2 4.5 36 128-174 4-39 (830)
486 3n74_A 3-ketoacyl-(acyl-carrie 55.9 6.3 0.00022 35.4 2.8 77 124-219 5-94 (261)
487 1pn0_A Phenol 2-monooxygenase; 55.8 9.4 0.00032 40.2 4.5 39 128-173 8-46 (665)
488 3ruf_A WBGU; rossmann fold, UD 55.7 7 0.00024 36.4 3.2 101 126-243 23-151 (351)
489 3uko_A Alcohol dehydrogenase c 55.5 21 0.00071 34.3 6.6 37 124-171 190-226 (378)
490 3fmw_A Oxygenase; mithramycin, 55.3 9.6 0.00033 39.4 4.4 33 128-172 49-81 (570)
491 3sc6_A DTDP-4-dehydrorhamnose 55.3 11 0.00038 33.9 4.4 84 129-243 6-106 (287)
492 3nlc_A Uncharacterized protein 55.2 6.9 0.00024 40.6 3.3 33 128-172 107-139 (549)
493 3tpc_A Short chain alcohol deh 55.2 25 0.00086 31.5 6.8 75 125-218 4-91 (257)
494 3ghy_A Ketopantoate reductase 55.0 11 0.00037 35.9 4.4 102 128-246 3-107 (335)
495 3qfa_A Thioredoxin reductase 1 54.8 11 0.00038 38.1 4.7 34 127-172 31-64 (519)
496 2c20_A UDP-glucose 4-epimerase 54.8 21 0.00072 32.7 6.3 99 129-243 2-118 (330)
497 1kol_A Formaldehyde dehydrogen 54.6 27 0.00092 33.7 7.3 49 111-171 170-218 (398)
498 3pi7_A NADH oxidoreductase; gr 54.5 44 0.0015 31.5 8.7 92 117-230 155-253 (349)
499 3eag_A UDP-N-acetylmuramate:L- 54.3 11 0.00039 35.8 4.5 32 129-172 5-37 (326)
500 1hdc_A 3-alpha, 20 beta-hydrox 54.2 7.5 0.00026 35.1 3.0 36 125-172 2-38 (254)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=3.9e-150 Score=1162.37 Aligned_cols=386 Identities=52% Similarity=0.895 Sum_probs=377.3
Q ss_pred CCcchhHHHHHHHhcCCCCCCeeeeEecCCCCchhhccCcccccccccCCChhhhHHHHHHHHHHHHHHhCCCeeeeecc
Q 016501 1 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 80 (388)
Q Consensus 1 mgI~~GKl~Ly~a~gGi~P~~~lPi~lDvgT~n~~ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~~I~~ED 80 (388)
||||+||++|||+||||||++|||||||+|||||+||+||+|+||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 155 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~ED 234 (555)
T 1gq2_A 155 MGIPVGKLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFED 234 (555)
T ss_dssp GHHHHHHHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred cccchhHHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHcCCCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChh
Q 016501 81 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 160 (388)
Q Consensus 81 f~~~~af~iL~ryr~~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~ 160 (388)
|++||||+||+|||++||||||||||||+|+||||+||+|++||+|+||||||+|||+||+|||+||+.+| +++|+|+|
T Consensus 235 f~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~-~~~G~~~e 313 (555)
T 1gq2_A 235 FANANAFRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAM-QKEGVSKE 313 (555)
T ss_dssp CCHHHHHHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHH-HHHTCCHH
T ss_pred cCCccHHHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHH-HHcCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997665 56699999
Q ss_pred hhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEE
Q 016501 161 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 240 (388)
Q Consensus 161 eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIF 240 (388)
||++||||||++|||+++| ++|+++|++||++.++.++|+|||+++|||||||+|+++|+||+||||+|+++|+|||||
T Consensus 314 eA~~~i~~~D~~Gli~~~r-~~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 392 (555)
T 1gq2_A 314 EAIKRIWMVDSKGLIVKGR-ASLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIF 392 (555)
T ss_dssp HHHTTEEEEETTEECBTTC-SSCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred HHhCcEEEEECCCeeeCCC-CCchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 9999999999999999999 779999999999876678999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceee-CCEEeccccccccccchHHHHHHHHhCCcccCHHHHHHHHHH
Q 016501 241 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEA 319 (388)
Q Consensus 241 aLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~-~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA~a 319 (388)
||||||+++||+||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||||++++||++|||+|+++||++
T Consensus 393 aLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~a 472 (555)
T 1gq2_A 393 ALSNPTSKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEV 472 (555)
T ss_dssp ECCSSGGGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred ECCCCCCccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHcccCccccCCCCcCCCCCCchhhhHHHHHHHHHHHHHhCCCCCCCChhhHHHHHHhcCcccCCCCCC
Q 016501 320 LAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 388 (388)
Q Consensus 320 LA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aV~~~a~~~G~A~~~~~p~dl~~~i~~~mw~P~Y~~~~ 388 (388)
||++++++++..++|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 473 lA~~v~~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 473 IAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHTCCHHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred HHhccccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 999999999999999999999999999999999999999999988777899999999999999999873
No 2
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=1.1e-149 Score=1165.31 Aligned_cols=386 Identities=47% Similarity=0.821 Sum_probs=377.7
Q ss_pred CCcchhHHHHHHHhcCCCCCCeeeeEecCCCCchhhccCcccccccccCCChhhhHHHHHHHHHHHHHHhCCCeeeeecc
Q 016501 1 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 80 (388)
Q Consensus 1 mgI~~GKl~Ly~a~gGi~P~~~lPi~lDvgT~n~~ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~~I~~ED 80 (388)
||||+||++|||+||||||++|||||||+|||||+||+||||+||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHcCCCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChh
Q 016501 81 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 160 (388)
Q Consensus 81 f~~~~af~iL~ryr~~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~ 160 (388)
|++||||+||+|||++||||||||||||+|+|||||||+|++||+|+||||||+|||+||+|||+||+.+ |+++|+|++
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~-m~~~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQ-MQNEGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHH-HHTTTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHH-HHHcCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999766 467799999
Q ss_pred hhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEE
Q 016501 161 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 240 (388)
Q Consensus 161 eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIF 240 (388)
||++||||||++|||+++| ++|+++|++||++.++.++|+|||+++|||||||+|+++|+||+||||+|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r-~~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNR-KEMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTC-SSCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCC-CCchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 9999999999999999999 789999999999876678999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceeeCCEEeccccccccccchHHHHHHHHhCCcccCHHHHHHHHHHH
Q 016501 241 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEAL 320 (388)
Q Consensus 241 aLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA~aL 320 (388)
||||||+++||+||||++||+|+|||||||||+||+|+||+++|||+||+|+|||||||++++||++|||+|+++||++|
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcccCccccCCCCcCCCCCCchhhhHHHHHHHHHHHHHhCCCCCCCChhhHHHHHHhcCcccCCCCCC
Q 016501 321 AKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 388 (388)
Q Consensus 321 A~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aV~~~a~~~G~A~~~~~p~dl~~~i~~~mw~P~Y~~~~ 388 (388)
|++++++++..++|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 99999999999999999999999999999999999999999988778899999999999999999873
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=4.2e-149 Score=1157.65 Aligned_cols=387 Identities=49% Similarity=0.868 Sum_probs=377.4
Q ss_pred CCcchhHHHHHHHhcCCCCCCeeeeEecCCCCchhhccCcccccccccCCChhhhHHHHHHHHHHHHHHhCCCeeeeecc
Q 016501 1 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 80 (388)
Q Consensus 1 mgI~~GKl~Ly~a~gGi~P~~~lPi~lDvgT~n~~ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~~I~~ED 80 (388)
||||+||++|||+||||||++|||||||+||||++||+||+|+||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 157 m~ipvGKl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~ED 236 (564)
T 1pj3_A 157 MGIPVGKLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFED 236 (564)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ccceehHHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHcCCCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChh
Q 016501 81 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 160 (388)
Q Consensus 81 f~~~~af~iL~ryr~~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~ 160 (388)
|++||||+||+|||++||||||||||||+|+||||+||+|++||+|+||||||+|||+||+|||+||+.+ |+++|+|+|
T Consensus 237 f~~~~af~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~-m~~~Gl~~e 315 (564)
T 1pj3_A 237 FGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMS-MVENGLSEQ 315 (564)
T ss_dssp CCHHHHHHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHH-HHHTTCCHH
T ss_pred cCCccHHHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHH-HHHcCCChH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999766 466799999
Q ss_pred hhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCC--CCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcE
Q 016501 161 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPL 238 (388)
Q Consensus 161 eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~--~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPI 238 (388)
||++||||||++|||+++|.++|+++|++||++.++. ++|+|||+++|||||||+|+++|+||+||||+|+++|+|||
T Consensus 316 eA~~~i~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PI 395 (564)
T 1pj3_A 316 EAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPV 395 (564)
T ss_dssp HHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCE
T ss_pred HhhCcEEEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCE
Confidence 9999999999999999999557999999999987665 79999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceee-CCEEeccccccccccchHHHHHHHHhCCcccCHHHHHHHH
Q 016501 239 ILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAAS 317 (388)
Q Consensus 239 IFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~-~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA 317 (388)
||||||||+++||+||||++||+|+|||||||||+||+| +||+|+|||+||+|+|||||||++++||++|||+|+++||
T Consensus 396 IFaLSNPt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA 475 (564)
T 1pj3_A 396 IFALSNPTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAA 475 (564)
T ss_dssp EEECCSSGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHH
T ss_pred EEECCCCCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHcccCccccCCCCcCCCCCCchhhhHHHHHHHHHHHHHhCCCCCCCChhhHHHHHHhcCcccCCCCCC
Q 016501 318 EALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 388 (388)
Q Consensus 318 ~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aV~~~a~~~G~A~~~~~p~dl~~~i~~~mw~P~Y~~~~ 388 (388)
++||++++++++..++|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|.|++|+
T Consensus 476 ~aLA~~v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 476 KALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp HHHHTTCCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred HHHHhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999999999988778899999999999999999873
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=2.6e-108 Score=837.15 Aligned_cols=326 Identities=32% Similarity=0.437 Sum_probs=299.0
Q ss_pred CCcchhHHHHHHHhcCCCCCCeeeeEecCCCCchhhccCcccccccccCCChhhhHHHHHHHHHHHHHHhCCCeeeeecc
Q 016501 1 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 80 (388)
Q Consensus 1 mgI~~GKl~Ly~a~gGi~P~~~lPi~lDvgT~n~~ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~~~I~~ED 80 (388)
||||+||++|||+||||| |||||||+||+| +++|| ++|+ |||+++.++||. |||||
T Consensus 114 mpImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlED 169 (487)
T 3nv9_A 114 LGVMEGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLED 169 (487)
T ss_dssp HHHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECS
T ss_pred CchhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhh
Confidence 689999999999999999 999999999765 46664 3433 566666667766 99999
Q ss_pred CCCchHHHHHHHHcC--CCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCC
Q 016501 81 FANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAP 158 (388)
Q Consensus 81 f~~~~af~iL~ryr~--~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s 158 (388)
|++||||+||+|||+ +||||||||||||+|+||||+||+|++||+|+||||||+|||+||+|||+||+. .|+|
T Consensus 170 f~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~ 244 (487)
T 3nv9_A 170 ISQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGAD 244 (487)
T ss_dssp CCTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCC
T ss_pred cCCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCC
Confidence 999999999999998 899999999999999999999999999999999999999999999999999943 5998
Q ss_pred hhhhcCcEEEEcCCCccccCCCCCc-----cHhhhhhcccc--CCCCCHHHHhcccCCcEEEEecCC-CCCCCHHHHHHH
Q 016501 159 VEETRKKICLVDSKGLIVSSRKDSL-----QHFKKPWAHEH--EPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAM 230 (388)
Q Consensus 159 ~~eA~~~i~l~D~~Glv~~~r~~~l-----~~~k~~~a~~~--~~~~~L~eav~~vkptvlIG~S~~-~g~ft~evi~~M 230 (388)
+ +||||||++|||+++| ++| +++|.+||++. +..++|+|+|++ +|||||+|++ +|+||+||||+|
T Consensus 245 ~----~~i~l~D~~Gli~~~R-~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~M 317 (487)
T 3nv9_A 245 P----KKIVMFDSKGSLHNGR-EDIKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSM 317 (487)
T ss_dssp G----GGEEEEETTEECCTTC-HHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTS
T ss_pred c----ccEEEEeccccccCCc-chhhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhh
Confidence 5 8999999999999999 667 44678888864 256899999998 7999999977 799999999999
Q ss_pred hcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceeeCCEEeccccccccccchHHHHHHHHhCCcccCH
Q 016501 231 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHD 310 (388)
Q Consensus 231 a~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd 310 (388)
+ +||||||||||| |||+||||++ +|++||||| |+++|||+||+|+|||||||++++||++|||
T Consensus 318 a---~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATG----------rsd~PnQ~NN~liFPGI~~Gal~~~A~~Itd 380 (487)
T 3nv9_A 318 G---EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATG----------RGDFPNQVNNSVGFPGILKGALIVRARKITD 380 (487)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHTTCSSCCH
T ss_pred c---CCCEEEECCCCC--ccCCHHHHHH--hCCEEEEEC----------CCCCcccCcceeEcchhhHHHHHcCCcccCH
Confidence 7 899999999999 7999999998 599999998 7789999999999999999999999999999
Q ss_pred HHHHHHHHHHHcccCccccCCCCcCCCCCCchhhhHHHHHHHHHHHHHhCCCCCC-CChhhHHHHHHhcCc
Q 016501 311 DMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRL-PRPQNLVKCAESCMY 380 (388)
Q Consensus 311 ~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aV~~~a~~~G~A~~~-~~p~dl~~~i~~~mw 380 (388)
+|+++||++||++++++++.+++|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++++.
T Consensus 381 ~M~~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~~ 450 (487)
T 3nv9_A 381 NMAIAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDIK 450 (487)
T ss_dssp HHHHHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 799999999999999999999987 678899999988764
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=7.7e-98 Score=751.52 Aligned_cols=297 Identities=30% Similarity=0.409 Sum_probs=276.8
Q ss_pred CCcchhHHHHHHHhcCCCCCCeeeeEecCCCCchhhccCcccccccccCCChhhhHHHHHHHHHHHHHHhCCC-eeeeec
Q 016501 1 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VLIQFE 79 (388)
Q Consensus 1 mgI~~GKl~Ly~a~gGi~P~~~lPi~lDvgT~n~~ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~~I~~E 79 (388)
|+||+||+.||++||||| ++|||||+|| +||||+++++.| |. +.||||
T Consensus 89 ~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~I~lE 137 (398)
T 2a9f_A 89 MPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGGINLE 137 (398)
T ss_dssp HHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSEEEEC
T ss_pred CcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeEeccc
Confidence 579999999999999999 9999999995 799999999988 76 889999
Q ss_pred cCCCchHHHHHHHHcC--CCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCC
Q 016501 80 DFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 157 (388)
Q Consensus 80 Df~~~~af~iL~ryr~--~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~ 157 (388)
||++||||++|+|||+ +||||||||||||+|+|||++||+|++|++|+|+||||+|||+||++||++++.. |+
T Consensus 138 D~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~-----Ga 212 (398)
T 2a9f_A 138 DISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA-----GA 212 (398)
T ss_dssp SCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH-----TC
T ss_pred cCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc-----CC
Confidence 9999999999999998 5999999999999999999999999999999999999999999999999999542 74
Q ss_pred ChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccC---CCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCC
Q 016501 158 PVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN 234 (388)
Q Consensus 158 s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~---~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~ 234 (388)
+|||++|++|||+++|.++|+++|++||++.. ...+|+|+|++ +|+|||+|+ +|+||+|+|++|+
T Consensus 213 ------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma--- 280 (398)
T 2a9f_A 213 ------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA--- 280 (398)
T ss_dssp ------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC---
T ss_pred ------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhhC---
Confidence 79999999999999985569999999999753 24689999998 999999998 8999999999998
Q ss_pred CCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceeeCCEEeccccccccccchHHHHHHHHhCCcccCHHHHH
Q 016501 235 EKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLL 314 (388)
Q Consensus 235 ~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~ 314 (388)
++|||||||||| |||+||||++| |++||||| |+++|||+||+|+|||||||++++||++|||+|++
T Consensus 281 ~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d~m~~ 346 (398)
T 2a9f_A 281 ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITVEMQI 346 (398)
T ss_dssp SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCHHHHH
T ss_pred CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCHHHHH
Confidence 899999999999 89999999999 99999998 89999999999999999999999999999999999
Q ss_pred HHHHHHHcccCccccCCCCcCCCCCCchhhhHHHHHHHHHHHHHhC
Q 016501 315 AASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELG 360 (388)
Q Consensus 315 aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aV~~~a~~~G 360 (388)
+||++||++++++++.+++|||++++ |+||.+||.||+++|+++.
T Consensus 347 aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 347 AAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999 9999999999999998653
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=7e-92 Score=707.03 Aligned_cols=288 Identities=31% Similarity=0.426 Sum_probs=272.6
Q ss_pred CCcchhHHHHHHHhcCCCCCCeeeeEecCCCCchhhccCcccccccccCCChhhhHHHHHHHHHHHHHHhCCC-eeeeec
Q 016501 1 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VLIQFE 79 (388)
Q Consensus 1 mgI~~GKl~Ly~a~gGi~P~~~lPi~lDvgT~n~~ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~~I~~E 79 (388)
|+||+||+.||++||||| ++|||||+|| +||||+++++.| |. ..||||
T Consensus 93 ~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~i~lE 141 (388)
T 1vl6_A 93 LPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGGINLE 141 (388)
T ss_dssp HHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSEEEEC
T ss_pred CcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceEeCHh
Confidence 579999999999999999 9999999995 799999999988 66 789999
Q ss_pred cCCCchHHHHHHHHcC--CCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCC
Q 016501 80 DFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 157 (388)
Q Consensus 80 Df~~~~af~iL~ryr~--~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~ 157 (388)
||++||||++|+|||+ +|||||||||||++|++||++||+|++|++|+++||||+|||+||+++|++|+.. |
T Consensus 142 D~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~-----G- 215 (388)
T 1vl6_A 142 DIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL-----G- 215 (388)
T ss_dssp SCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH-----T-
T ss_pred hcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC-----C-
Confidence 9999999999999998 6999999999999999999999999999999999999999999999999999532 6
Q ss_pred ChhhhcCcEEEEcCCCccccCCCCC--ccHhhhhhccccCC---CCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhc
Q 016501 158 PVEETRKKICLVDSKGLIVSSRKDS--LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS 232 (388)
Q Consensus 158 s~~eA~~~i~l~D~~Glv~~~r~~~--l~~~k~~~a~~~~~---~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~ 232 (388)
.+|||++|++|||+.+| .+ |+++|++||++... ..+|+|+|++ +|+|||+|+ +|+||+|+|++|+
T Consensus 216 -----~~~I~v~Dr~Gli~~~R-~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~Ma- 285 (388)
T 1vl6_A 216 -----VKNVVAVDRKGILNEND-PETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKKMS- 285 (388)
T ss_dssp -----CCEEEEEETTEECCTTS-GGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTTSC-
T ss_pred -----CCeEEEEECCCcccCCC-cccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHhcC-
Confidence 48999999999999999 54 99999999997532 4689999998 999999999 7999999999998
Q ss_pred CCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceeeCCEEeccccccccccchHHHHHHHHhCCcccCHHH
Q 016501 233 FNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDM 312 (388)
Q Consensus 233 ~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m 312 (388)
++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||||++++||+ |||+|
T Consensus 286 --~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~~~m 348 (388)
T 1vl6_A 286 --RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-ITKNM 348 (388)
T ss_dssp --SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CCHHH
T ss_pred --CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cCHHH
Confidence 899999999999 89999999999 99999998 899999999999999999999999999 99999
Q ss_pred HHHHHHHHHcccCccccCCCCcCCCCCCchhhhHHHHHHHHHHH
Q 016501 313 LLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKA 356 (388)
Q Consensus 313 ~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aV~~~a 356 (388)
+++||++||+++ ++.+++|||++++ |+||.+||.||+++|
T Consensus 349 ~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 349 LLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999 7789999999999 999999999999865
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=2.9e-72 Score=573.62 Aligned_cols=320 Identities=28% Similarity=0.376 Sum_probs=292.5
Q ss_pred CCcchhHHHHHHHhcCCCCCCeeeeEecCCCCchhhccCcccccccccCCChhhhHHHHHHHHHHHHHHhCCC-eeeeec
Q 016501 1 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VLIQFE 79 (388)
Q Consensus 1 mgI~~GKl~Ly~a~gGi~P~~~lPi~lDvgT~n~~ll~Dp~YlG~r~~R~~g~~y~~~vdefv~av~~~fGp~-~~I~~E 79 (388)
+|+++||+.||++||||| ++|+++|+. | +|||+++++..| |+ ..||||
T Consensus 87 sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~GinvE 135 (439)
T 2dvm_A 87 LPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGGINLE 135 (439)
T ss_dssp HHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSEEEEC
T ss_pred CHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcEEEEE
Confidence 468899999999999999 999999982 3 578888887655 43 459999
Q ss_pred cCCCchHHHHHHHHcC--CCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCC
Q 016501 80 DFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 157 (388)
Q Consensus 80 Df~~~~af~iL~ryr~--~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~ 157 (388)
||+.||||++|++|++ ++||||||+||||.+.++|+++|++..|++|+++|+||+|||+||.+|+++|.. .|+
T Consensus 136 D~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~-----~G~ 210 (439)
T 2dvm_A 136 DIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTE-----AGV 210 (439)
T ss_dssp SCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHH-----TTC
T ss_pred eCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHH-----cCC
Confidence 9999999999999997 799999999999999999999999999999999999999999999999999943 487
Q ss_pred ChhhhcCcEEEEc----CCCccccCCCCC---ccHhhhhhccccC---CCCCHHHHhcccCCcEEEEecCCC-CCCCHHH
Q 016501 158 PVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTFTKEV 226 (388)
Q Consensus 158 s~~eA~~~i~l~D----~~Glv~~~r~~~---l~~~k~~~a~~~~---~~~~L~eav~~vkptvlIG~S~~~-g~ft~ev 226 (388)
+ +++||++| |+||+++.. + |.++|++|++... ...+|.|+++. +|+|||+|+.+ |.|++++
T Consensus 211 ~----~~~I~vvd~~~~R~G~~~~a~--~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~e~ 282 (439)
T 2dvm_A 211 K----PENVRVVELVNGKPRILTSDL--DLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKPQW 282 (439)
T ss_dssp C----GGGEEEEEEETTEEEECCTTS--CHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCHHH
T ss_pred C----cCeEEEEEccCCCcCcccccc--chhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCChHH
Confidence 5 37999999 999998763 5 7888888887532 35689999987 99999999985 8999999
Q ss_pred HHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceeeCCEEeccccccccccchHHHHHHHHhCCc
Q 016501 227 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAI 306 (388)
Q Consensus 227 i~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~ 306 (388)
++.|+ ++||||+||||+ +||++++|++| |++++||| +++.|+|+||+|+|||||+|++++||+
T Consensus 283 v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~~a~ 345 (439)
T 2dvm_A 283 IEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDVRAR 345 (439)
T ss_dssp HTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHTTCS
T ss_pred HHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHhcCCC
Confidence 99997 899999999999 89999999998 89999998 899999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHcccCccccCCCCcCCCCCCchhhhHHHHHHHHHHHHHhCCCCCCCChhhHHHHHHhcCcccCC
Q 016501 307 RVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVY 384 (388)
Q Consensus 307 ~Itd~m~~aAA~aLA~~v~~~~~~~~~l~P~~~~ir~vs~~VA~aV~~~a~~~G~A~~~~~p~dl~~~i~~~mw~P~Y 384 (388)
+|||+|+++||++||++++++ ..++|||++++ |+||.+||.||+++|+++|+|+..++++|+.++++++||.+.|
T Consensus 346 ~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~~~ 420 (439)
T 2dvm_A 346 TITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFYEN 420 (439)
T ss_dssp CCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhhHH
Confidence 999999999999999999876 78999999999 9999999999999999999999877889999999999998764
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.15 E-value=4.8e-10 Score=114.55 Aligned_cols=169 Identities=11% Similarity=0.179 Sum_probs=126.5
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchHHHHH---------------------HHHcC-------CCccc-
Q 016501 50 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYGT-------THLVF- 100 (388)
Q Consensus 50 ~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~af~iL---------------------~ryr~-------~~~~F- 100 (388)
-+.+||+..+++.+.+ ..++|+.+| |-+..=...+- .||+. .+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 4667888877776542 335677666 55543333221 34442 69999
Q ss_pred ---------ccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 101 ---------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 101 ---------nDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
+|+++||+.++++|+.++ ++..|.+.+++|+|+|..|.++|+.+ .. .|+ +|+.+|+
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~L-ra----~Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAAL-KA----MGS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHH-HH----TTC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHH-HH----CCC-------EEEEEeC
Confidence 999999999999999865 79999999999999999999999998 33 364 5888887
Q ss_pred CCccccCCCCCccHhhhhhccc-cCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCCCCC
Q 016501 172 KGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSE 250 (388)
Q Consensus 172 ~Glv~~~r~~~l~~~k~~~a~~-~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E 250 (388)
+.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 532 1111211 1123579999997 99999998888999999999998 789999999997 89
Q ss_pred CCHHHHh
Q 016501 251 CTAEEAY 257 (388)
Q Consensus 251 ~tpe~A~ 257 (388)
++.+...
T Consensus 313 Id~~~L~ 319 (435)
T 3gvp_A 313 IDVASLR 319 (435)
T ss_dssp BTGGGGC
T ss_pred CCHHHHH
Confidence 9887653
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.11 E-value=3.7e-10 Score=115.45 Aligned_cols=131 Identities=16% Similarity=0.174 Sum_probs=106.4
Q ss_pred CCCccc----------ccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 016501 95 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 164 (388)
Q Consensus 95 ~~~~~F----------nDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~ 164 (388)
..+|+| +|+++||+.+++.+++. .++..|.+.+++|+|.|..|.++|+.+ .. .|+
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~L-ka----~Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAAL-RG----FGA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHH-HH----TTC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHH-HH----CCC-------
Confidence 479999 99999999999999965 569999999999999999999999999 33 363
Q ss_pred cEEEEcCCCccccCCCCCccHhhhhhccc-cCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecC
Q 016501 165 KICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 165 ~i~l~D~~Glv~~~r~~~l~~~k~~~a~~-~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+++++|++. .+...|.. .....+|.|+++. +|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 688888742 11111111 1123589999997 99999888877899999999997 889999999
Q ss_pred CCCCCCCCCHHHHhcc
Q 016501 244 NPTSQSECTAEEAYTW 259 (388)
Q Consensus 244 NPt~~~E~tpe~A~~~ 259 (388)
++. .|+.++...+.
T Consensus 299 Rg~--vEID~~~L~~~ 312 (436)
T 3h9u_A 299 HFD--TEIQVAWLKAN 312 (436)
T ss_dssp SSG--GGBCHHHHHHH
T ss_pred CCC--CccCHHHHHhh
Confidence 998 89999887653
No 10
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.33 E-value=1.8e-06 Score=89.47 Aligned_cols=131 Identities=16% Similarity=0.209 Sum_probs=102.3
Q ss_pred CCccc----------ccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCc
Q 016501 96 THLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 165 (388)
Q Consensus 96 ~~~~F----------nDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~ 165 (388)
.+|+| +|+++||+..++.++. |.++..|.+.+++|.|+|..|.++|+.+. ..|. +
T Consensus 226 ~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~La-----a~GA-------~ 290 (488)
T 3ond_A 226 LFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALK-----QAGA-------R 290 (488)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHH-----HTTC-------E
T ss_pred CCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHH-----HCCC-------E
Confidence 79999 7999999999999887 78999999999999999999999998883 2462 7
Q ss_pred EEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 166 ICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 166 i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
|+++|++.. + ..... ...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.+++
T Consensus 291 Viv~D~~~~----~---a~~Aa----~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~~ 354 (488)
T 3ond_A 291 VIVTEIDPI----C---ALQAT----MEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGHF 354 (488)
T ss_dssp EEEECSCHH----H---HHHHH----HTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSST
T ss_pred EEEEcCCHH----H---HHHHH----HhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCCC
Confidence 888887521 0 11111 111123467788776 99999988888899999999997 78899999998
Q ss_pred CCCCCCCHHHHhcc
Q 016501 246 TSQSECTAEEAYTW 259 (388)
Q Consensus 246 t~~~E~tpe~A~~~ 259 (388)
. .|++.++...|
T Consensus 355 ~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 355 D--NEIDMLGLETH 366 (488)
T ss_dssp T--TTBTHHHHHTS
T ss_pred C--cccchHHHHHh
Confidence 5 78888877655
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.29 E-value=4.4e-06 Score=85.89 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=100.3
Q ss_pred CCccc----------ccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCc
Q 016501 96 THLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 165 (388)
Q Consensus 96 ~~~~F----------nDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~ 165 (388)
.+|+| .|...||+-.++.|+. |.+|..|...+++|+|.|..|.++|+.+ .. .|+ +
T Consensus 208 ~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~l-ra----fGa-------~ 272 (464)
T 3n58_A 208 PFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSL-AG----AGA-------R 272 (464)
T ss_dssp CSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHH-HH----TTC-------E
T ss_pred CCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHH-HH----CCC-------E
Confidence 79999 7889999999998886 5679999999999999999999999998 33 263 6
Q ss_pred EEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC
Q 016501 166 ICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 166 i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
++++|++.. ....|. ..-...+|.|+++. +|+++-+++..++++++.++.|. +..||.-.++
T Consensus 273 Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvGR 335 (464)
T 3n58_A 273 VKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIGH 335 (464)
T ss_dssp EEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECSS
T ss_pred EEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcCC
Confidence 888876421 111111 11123479999997 99999988777899999999997 7889999998
Q ss_pred CCCCCCCCHHHHh
Q 016501 245 PTSQSECTAEEAY 257 (388)
Q Consensus 245 Pt~~~E~tpe~A~ 257 (388)
.. .|++.+...
T Consensus 336 gd--vEID~~aL~ 346 (464)
T 3n58_A 336 FD--NEIQVAALR 346 (464)
T ss_dssp ST--TTBTCGGGT
T ss_pred CC--cccCHHHHH
Confidence 87 677766554
No 12
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.71 E-value=0.00015 Score=72.94 Aligned_cols=142 Identities=16% Similarity=0.207 Sum_probs=87.3
Q ss_pred CchHHHHHHHHcCCCcccc--------cCcc---chHHHHHHHHHHHHHHhC----C----------CccccEEEEeCcc
Q 016501 83 NHNAFELLAKYGTTHLVFN--------DDIQ---GTASVVLAGVVAALKLIG----G----------TLAEHRFLFLGAG 137 (388)
Q Consensus 83 ~~~af~iL~ryr~~~~~Fn--------DDiq---GTa~V~lAgll~Al~~~g----~----------~L~d~riv~~GAG 137 (388)
++.+++-+.+ ..|++|+ +++. .+....+|| .+|++..+ + .+...||+|+|+|
T Consensus 105 d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG 181 (401)
T 1x13_A 105 NPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAG 181 (401)
T ss_dssp CHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCS
T ss_pred CHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCC
Confidence 4444444443 4677772 2222 566666666 44444432 2 2668999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCc-------c-----HhhhhhccccCC------CCC
Q 016501 138 EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-------Q-----HFKKPWAHEHEP------VNN 199 (388)
Q Consensus 138 sAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l-------~-----~~k~~~a~~~~~------~~~ 199 (388)
.+|.++++++ .. .|. +|+++|++.-..... +.+ + ..+..|++...+ ..+
T Consensus 182 ~iG~~aa~~a-~~----~Ga-------~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 182 VAGLAAIGAA-NS----LGA-------IVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp HHHHHHHHHH-HH----TTC-------EEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHH-HH----CCC-------EEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 9999999988 33 362 599999875321100 000 0 000012111000 124
Q ss_pred HHHHhcccCCcEEEEecCCC-----CCCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 200 LLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 200 L~eav~~vkptvlIG~S~~~-----g~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
|.+.++. .|++|++...+ .+++++.++.|. +..+|+-+|+|
T Consensus 249 l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk---~g~vIVdva~~ 294 (401)
T 1x13_A 249 FAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK---AGSVIVDLAAQ 294 (401)
T ss_dssp HHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGG
T ss_pred HHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC---CCcEEEEEcCC
Confidence 7888887 99999995333 679999999997 78899999987
No 13
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.59 E-value=4.6e-05 Score=77.29 Aligned_cols=110 Identities=18% Similarity=0.238 Sum_probs=72.3
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCc--c------------Hhhhhh
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL--Q------------HFKKPW 190 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l--~------------~~k~~~ 190 (388)
.+...||+|+|+|.+|..+|+++ .. .|. +++++|++.-..+.. +.+ + ..+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a-~~----lGa-------~V~v~D~~~~~l~~~-~~~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATA-RR----LGA-------VVSATDVRPAAKEQV-ASLGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHH-HH----TTC-------EEEEECSSTTHHHHH-HHTTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HH----CCC-------EEEEEcCCHHHHHHH-HHcCCceeecccccccccccccch
Confidence 46789999999999999999998 33 362 699999976421110 000 0 011224
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEEecCC-----CCCCCHHHHHHHhcCCCCcEEEecCC-CCCCCCCC
Q 016501 191 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 252 (388)
Q Consensus 191 a~~~~~------~~~L~eav~~vkptvlIG~S~~-----~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt~~~E~t 252 (388)
++...+ ..+|.++++. +|++|++-.. +.+||+++++.|. +..||+-+|- |-...|.|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2479999998 9999998433 3579999999998 8999999995 33345554
No 14
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.34 E-value=0.00023 Score=71.68 Aligned_cols=104 Identities=22% Similarity=0.203 Sum_probs=68.1
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCC---CC---Ccc---Hhhhhhcccc--
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR---KD---SLQ---HFKKPWAHEH-- 194 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r---~~---~l~---~~k~~~a~~~-- 194 (388)
+...|++|+|+|.+|..+|+.+ ..+ |. +++++|++.-..... +. .++ .....|++..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a-~~l----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATA-KRL----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHH-HHH----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHH-HHC----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 6789999999999999999998 333 62 699999874311000 00 000 0011122110
Q ss_pred ----CCCCCHHHHhcccCCcEEEEecCC-----CCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 195 ----EPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 195 ----~~~~~L~eav~~vkptvlIG~S~~-----~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
....+|.++++. .|++|++-.. +.+||+++++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 112468999988 9999997433 3579999999997 789999998654
No 15
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=97.20 E-value=0.0052 Score=62.67 Aligned_cols=179 Identities=19% Similarity=0.188 Sum_probs=128.0
Q ss_pred CCChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchHH-H-HHHHHcC---C-C-ccc----------ccCccchHHHH
Q 016501 49 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF-E-LLAKYGT---T-H-LVF----------NDDIQGTASVV 111 (388)
Q Consensus 49 R~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~af-~-iL~ryr~---~-~-~~F----------nDDiqGTa~V~ 111 (388)
..+..|-..|...|++++.+.-||..-|-=+|++..-.. . +.+.|+. . - .++ +|--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 345667777889999999998899888988999874322 2 4566642 1 1 121 34455688888
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhh-hhh
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPW 190 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k-~~~ 190 (388)
..++-.+++..|.+|++.||+|-|.|..|...|++|.. .|. +=+.+.|++|-|+... .|+... +.+
T Consensus 205 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e-----~Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~ 271 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHD-----AGA------KVIGISDANGGLYNPD--GLDIPYLLDK 271 (424)
T ss_dssp HHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHH-----HTC------EEEEEECSSCEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEECCCCcEECCC--CCCHHHHHHH
Confidence 88899999999999999999999999999999999943 252 4467999999999765 444322 122
Q ss_pred ccccC-------CCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 191 AHEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 191 a~~~~-------~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
.+... ..-+-.+.. .++.|+||=|..+ +.+|++-++.+ .-.+|.--+| |+
T Consensus 272 ~~~~g~i~~~~a~~~~~~~i~-~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 272 RDSFGMVTNLFTDVITNEELL-EKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CCSSSCCGGGCSCCBCHHHHH-HSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHHhCCCCCCCcEEecCccce-eccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 22111 011223333 4689999988875 79999988877 5789998898 65
No 16
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.16 E-value=0.0032 Score=59.88 Aligned_cols=142 Identities=15% Similarity=0.120 Sum_probs=94.0
Q ss_pred HHHHHHHc-CCCcccccC------ccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCCh
Q 016501 87 FELLAKYG-TTHLVFNDD------IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPV 159 (388)
Q Consensus 87 f~iL~ryr-~~~~~FnDD------iqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~ 159 (388)
..+.+..+ ..+.++|=. .-.+-+|+=.++..++...|..|.+.+++|+|+|..|..+|+.+. . .|+
T Consensus 107 id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~-~----~G~-- 179 (293)
T 3d4o_A 107 TYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFA-A----LGA-- 179 (293)
T ss_dssp HHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHH-H----TTC--
T ss_pred HHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHH-h----CCC--
Confidence 33333343 378888843 235556666666667777889999999999999999999999883 3 363
Q ss_pred hhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEE
Q 016501 160 EETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 239 (388)
Q Consensus 160 ~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPII 239 (388)
+++.+|+..- + ....+..-++ .-...+|.+.++. .|++|-+.. .+.++++.++.|. +..++
T Consensus 180 -----~V~~~dr~~~----~---~~~~~~~g~~-~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~l 240 (293)
T 3d4o_A 180 -----KVKVGARESD----L---LARIAEMGME-PFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFV 240 (293)
T ss_dssp -----EEEEEESSHH----H---HHHHHHTTSE-EEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEE
T ss_pred -----EEEEEECCHH----H---HHHHHHCCCe-ecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEE
Confidence 6888887521 1 1111100011 0012468888876 999997654 5899999999886 67788
Q ss_pred EecC-CCCCCCCCCHHHHh
Q 016501 240 LALS-NPTSQSECTAEEAY 257 (388)
Q Consensus 240 FaLS-NPt~~~E~tpe~A~ 257 (388)
+=+| +|. ++..+.+.
T Consensus 241 in~ar~~~---~~~~~~a~ 256 (293)
T 3d4o_A 241 IDLASKPG---GTDFRYAE 256 (293)
T ss_dssp EECSSTTC---SBCHHHHH
T ss_pred EEecCCCC---CCCHHHHH
Confidence 8888 454 45565553
No 17
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=97.06 E-value=0.039 Score=56.69 Aligned_cols=190 Identities=16% Similarity=0.171 Sum_probs=128.3
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchHH--HHHHHHc---CCCc-cc----------ccCccchHHHHHH
Q 016501 50 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TTHL-VF----------NDDIQGTASVVLA 113 (388)
Q Consensus 50 ~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~af--~iL~ryr---~~~~-~F----------nDDiqGTa~V~lA 113 (388)
.+..+...|-..||..+.+..||..-|-=+|++..-.. -+.+.|+ ...+ |+ .+--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 45667777778899999888899999999999874322 2445554 2222 11 1222346766777
Q ss_pred HHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhh----
Q 016501 114 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 189 (388)
Q Consensus 114 gll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~---- 189 (388)
++-.+++..|.+|++.||+|-|.|..|...|++|.. .|. +=+.+.|++|-|+... .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e-----~Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIE-----KGA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHH-----HTC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 788888888999999999999999999999999843 252 3345899999998764 44432211
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CCCCCCCCHHH
Q 016501 190 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 255 (388)
Q Consensus 190 -----------~a~~~~~~~--~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt~~~E~tpe~ 255 (388)
|+...+... +-.+ +=.++.||||=|.. ++.+|++-++.+-+ +.-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111001000 0011 22467999998887 47999999999843 24689999999 764 55 556
Q ss_pred Hhc
Q 016501 256 AYT 258 (388)
Q Consensus 256 A~~ 258 (388)
.++
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=97.00 E-value=0.032 Score=57.28 Aligned_cols=184 Identities=16% Similarity=0.118 Sum_probs=127.4
Q ss_pred cCCChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchH-----HHHHHHHcCCC-ccc----------ccCccchHHHH
Q 016501 48 RRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTTH-LVF----------NDDIQGTASVV 111 (388)
Q Consensus 48 ~R~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~a-----f~iL~ryr~~~-~~F----------nDDiqGTa~V~ 111 (388)
+..+..|...|...|+..+.+..||..-|--.|+..... +...++++... .|| .+.-.-||-=+
T Consensus 139 k~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv 218 (450)
T 4fcc_A 139 KGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGL 218 (450)
T ss_dssp TTCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeH
Confidence 345677888899999999999999999999999976433 22233444332 232 23344488777
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 191 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a 191 (388)
.-++-.+++..|.+|+..||+|-|.|..|...|+.|.. .|. +=|.+.|++|-|+... .++..+....
T Consensus 219 ~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e-----~Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l 285 (450)
T 4fcc_A 219 VYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAME-----FGA------RVITASDSSGTVVDES--GFTKEKLARL 285 (450)
T ss_dssp HHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEEETTEEEECTT--CCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHh-----cCC------eEEEEecCCceEEeCC--CCCHHHHHHH
Confidence 88888999999999999999999999999999999932 462 5567889999998754 4544332111
Q ss_pred cc--cCCCCCHHH-------------HhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 192 HE--HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 192 ~~--~~~~~~L~e-------------av~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
.+ ....+.+.+ .+-.++.|||+=|..+ +.+|++-++.+.+. .-.+|.--+| |+
T Consensus 286 ~e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 286 IEIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 10 000111111 1224679999988875 79999999999632 2357887888 65
No 19
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.93 E-value=0.0083 Score=61.03 Aligned_cols=187 Identities=14% Similarity=0.130 Sum_probs=127.9
Q ss_pred CCChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchH--HHHHHHHcC---C--Cccc----------ccCccchHHHH
Q 016501 49 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T--HLVF----------NDDIQGTASVV 111 (388)
Q Consensus 49 R~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~a--f~iL~ryr~---~--~~~F----------nDDiqGTa~V~ 111 (388)
..+..|-..|...|++.+.+.-||..-|-=+|++..-. --+.+.|+. . -.++ ++.-.-||-=+
T Consensus 122 ~~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 201 (419)
T 3aoe_E 122 GLSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGA 201 (419)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHH
Confidence 34556777788999999999999999999999987532 234566632 1 0111 33344577777
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCccccCCCCCccHhh-hh
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KP 189 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~-l~D~~Glv~~~r~~~l~~~k-~~ 189 (388)
.-++-.+++-.|.+|++.||+|.|.|..|...|++|.. .| -+++ +.|++|-|+... .|+..+ +.
T Consensus 202 ~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~G-------akVVavsD~~G~i~dp~--Gld~~~l~~ 267 (419)
T 3aoe_E 202 LLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LG-------MRVVAVATSMGGMYAPE--GLDVAEVLS 267 (419)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEEETTEEEECTT--CCCHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEcCCCeEECCC--CCCHHHHHH
Confidence 77788889999999999999999999999999999832 36 3555 999999998765 343322 11
Q ss_pred hccccCCCC----CHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CCCCCCCCHHHHhc
Q 016501 190 WAHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 258 (388)
Q Consensus 190 ~a~~~~~~~----~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt~~~E~tpe~A~~ 258 (388)
+.+...... +=.+ +-.++.|+|+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.++
T Consensus 268 ~~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 268 AYEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 111111000 0012 23468999998876 479999988887 4679999999 663 43 334443
No 20
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.81 E-value=0.0058 Score=60.52 Aligned_cols=111 Identities=19% Similarity=0.252 Sum_probs=71.8
Q ss_pred HHHHHHHHhCC----------CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCc
Q 016501 114 GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 183 (388)
Q Consensus 114 gll~Al~~~g~----------~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l 183 (388)
+++.+.+..++ .+...|++|+|+|.+|.+++.++ .. .|. +|+++|++.- |.+.+
T Consensus 148 av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a-~~----~Ga-------~V~~~d~~~~----~~~~~ 211 (384)
T 1l7d_A 148 AVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATA-KR----LGA-------VVMATDVRAA----TKEQV 211 (384)
T ss_dssp HHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHH-HH----TTC-------EEEEECSCST----THHHH
T ss_pred HHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHH-HH----CCC-------EEEEEeCCHH----HHHHH
Confidence 56666666554 67899999999999999999888 33 362 4999998632 10000
Q ss_pred cHh-----------------hhhhccccC------CCCCHHHHhcccCCcEEEEecCC-----CCCCCHHHHHHHhcCCC
Q 016501 184 QHF-----------------KKPWAHEHE------PVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNE 235 (388)
Q Consensus 184 ~~~-----------------k~~~a~~~~------~~~~L~eav~~vkptvlIG~S~~-----~g~ft~evi~~Ma~~~~ 235 (388)
... +-.|++... ....|.+.++. .|++|.++.. +.+++++.++.|. +
T Consensus 212 ~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk---~ 286 (384)
T 1l7d_A 212 ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK---P 286 (384)
T ss_dssp HHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC---T
T ss_pred HHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC---C
Confidence 000 001111100 00127788876 9999998822 3468999999997 7
Q ss_pred CcEEEecCCC
Q 016501 236 KPLILALSNP 245 (388)
Q Consensus 236 rPIIFaLSNP 245 (388)
..+|+-+|-+
T Consensus 287 g~vivdva~~ 296 (384)
T 1l7d_A 287 GSVIIDLAVE 296 (384)
T ss_dssp TCEEEETTGG
T ss_pred CCEEEEEecC
Confidence 7899999864
No 21
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.80 E-value=0.027 Score=57.60 Aligned_cols=179 Identities=15% Similarity=0.125 Sum_probs=122.5
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCch--HHHHHHHHcC---C--Cccc----------ccCccchHHHHH
Q 016501 50 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVF----------NDDIQGTASVVL 112 (388)
Q Consensus 50 ~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~--af~iL~ryr~---~--~~~F----------nDDiqGTa~V~l 112 (388)
.+..|-..|...|++.+.+.-||..-|-=+|++..- ---+.+.|+. . -.++ ++.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 455677788899999999999999989999999742 2224566632 1 1222 334445776667
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCccccCCCCCcc---Hhhh
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQ---HFKK 188 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~-l~D~~Glv~~~r~~~l~---~~k~ 188 (388)
-++-.+++-.|.+|+..||+|.|.|..|...|++|.. .| -+++ +.|++|-|+...+=++. .++.
T Consensus 220 ~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e-----~G-------akvVavsD~~G~i~dp~Gld~~~l~~~~~ 287 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHD-----HG-------ARVVAVQDHTGTVYNEAGIDPYDLLRHVQ 287 (440)
T ss_dssp HHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHH-----CC-------CEEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence 7778888999999999999999999999999999932 35 2455 99999999886522222 2222
Q ss_pred hhcccc--C--CCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 189 PWAHEH--E--PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 189 ~~a~~~--~--~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
.+-+-. + ..-+-.+ +-.++.|+||=+.. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 288 ~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 288 EFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred hcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 211000 0 0012234 34578999998876 468888888877 5678888888 66
No 22
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.77 E-value=0.0029 Score=61.81 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=78.1
Q ss_pred chHHHHHHHHHHHHHHhCCCccccEEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCcc
Q 016501 106 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 184 (388)
Q Consensus 106 GTa~V~lAgll~Al~~~g~~L~d~riv~~GAG-sAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~ 184 (388)
+-.-+|-.|++-.++-.+.+|+..++|++|+| ..|.-+|.+|.. .| .++++++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLW-----NN-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TT-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEECC------------
Confidence 33446888899999999999999999999999 589999999832 24 458888743
Q ss_pred HhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 185 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 185 ~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 2468899988 99999999999999999986 55677777654
No 23
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.65 E-value=0.0046 Score=59.99 Aligned_cols=91 Identities=19% Similarity=0.289 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHhCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhh
Q 016501 109 SVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK 187 (388)
Q Consensus 109 ~V~lAgll~Al~~~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k 187 (388)
-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|.. .|. .+++++|+
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~-----~gA-------tVtv~hs~--------------- 194 (285)
T 3l07_A 142 SCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLN-----AKA-------TVTTCHRF--------------- 194 (285)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT---------------
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHH-----CCC-------eEEEEeCC---------------
Confidence 357788999999999999999999999876 89999999932 352 57888653
Q ss_pred hhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecC
Q 016501 188 KPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 188 ~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
..+|.+.++. +|++|...+.++.++.|+++ +.-+|+=++
T Consensus 195 ---------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ---------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ---------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1368899988 99999999999999999885 455666554
No 24
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.56 E-value=0.064 Score=55.34 Aligned_cols=179 Identities=15% Similarity=0.162 Sum_probs=121.0
Q ss_pred ChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchH--HHHHHHHcC---C-Cccc----------ccCccchHHHHHHH
Q 016501 51 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T-HLVF----------NDDIQGTASVVLAG 114 (388)
Q Consensus 51 ~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~a--f~iL~ryr~---~-~~~F----------nDDiqGTa~V~lAg 114 (388)
+..+...|-..||..+.+..||..-|-=+|++.... --+.+.|+. . -.|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 456667777789999998889998899999987422 123455542 1 0111 12334466666667
Q ss_pred HHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCccccCCCCCccHh-------
Q 016501 115 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHF------- 186 (388)
Q Consensus 115 ll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~-l~D~~Glv~~~r~~~l~~~------- 186 (388)
+-.+++..|.+|+..||+|-|.|..|...|++|.. .| .+++ +.|++|-|+... .++..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~-----~G-------akvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLH-----LN-------VKVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHH-----TT-------CEECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 78888889999999999999999999999999932 36 2455 899999988754 44322
Q ss_pred -h-------hhhccccCCCC--CHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 187 -K-------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 187 -k-------~~~a~~~~~~~--~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
| ..|+...+... +-.+.. .++.||||=|.. ++.+|++-++.+-+ |.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 12221000000 001222 468999998886 57999999999853 35679999999 65
No 25
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.50 E-value=0.035 Score=56.49 Aligned_cols=178 Identities=14% Similarity=0.171 Sum_probs=111.9
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchH--HHHHHHHcC---CC---ccc----------ccCccchHHHH
Q 016501 50 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---TH---LVF----------NDDIQGTASVV 111 (388)
Q Consensus 50 ~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~a--f~iL~ryr~---~~---~~F----------nDDiqGTa~V~ 111 (388)
.+..|-..|...|++.+.+.-||..-|-=+|++..-. --+.+.|+. .. .++ ++.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 4556777788999999999999999999999997532 234566642 11 222 23334466666
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC-----CccccCCCCCccHh
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHF 186 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~-----Glv~~~r~~~l~~~ 186 (388)
.-++-.+++-.|.+|+..||+|.|.|..|...|++|.. .|. +=+-+.|++ |-|+... .|+..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~--Gld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNEN--GIDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSS--CCCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCC--CCCHH
Confidence 66778888889999999999999999999999999932 362 334499999 9999765 33322
Q ss_pred h-hhhccccCCC------C--CHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 187 K-KPWAHEHEPV------N--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 187 k-~~~a~~~~~~------~--~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
. +.+.+..... . +-.+ +-.++.||||=+.. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 1 1111110000 0 1111 23356777776665 467777777666 4566666666 54
No 26
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.41 E-value=0.0057 Score=60.17 Aligned_cols=112 Identities=20% Similarity=0.252 Sum_probs=80.8
Q ss_pred HHHHHHHHHHH---------hCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCC
Q 016501 111 VLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK 180 (388)
Q Consensus 111 ~lAgll~Al~~---------~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~ 180 (388)
|-.|.+-.++- .|.+|+..+++++|+|. .|.-+|++|.. .| .+++++|++..-...|.
T Consensus 151 Tp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~-----~g-------AtVtv~nR~~~~l~~ra 218 (320)
T 1edz_A 151 TPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAN-----DG-------ATVYSVDVNNIQKFTRG 218 (320)
T ss_dssp HHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHT-----TS-------CEEEEECSSEEEEEESC
T ss_pred cHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHH-----CC-------CEEEEEeCchHHHHhHH
Confidence 44555666666 68899999999999995 59999998832 24 36999999877666664
Q ss_pred CCccHhhhhhccccCC---C--CCHHHHhcccCCcEEEEecCCCCC-CCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 181 DSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 181 ~~l~~~k~~~a~~~~~---~--~~L~eav~~vkptvlIG~S~~~g~-ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
..+... .+.... . .+|.+.++. +|++|+..+.++. +|.|+|+ +.-+|+=++-|-
T Consensus 219 ~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 219 ESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 444311 121100 1 579999998 9999999998887 9999975 445777777764
No 27
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.41 E-value=0.0083 Score=58.20 Aligned_cols=95 Identities=16% Similarity=0.259 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHhCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh
Q 016501 108 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 186 (388)
Q Consensus 108 a~V~lAgll~Al~~~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~ 186 (388)
.-+|-.|++..++-.+.+|+..++|++|+|. .|..+|.+|.. .| ..+++++++
T Consensus 140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~-----~g-------AtVtv~h~~-------------- 193 (285)
T 3p2o_A 140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLN-----AG-------ATVSVCHIK-------------- 193 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TT-------CEEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CeEEEEeCC--------------
Confidence 4468888999999999999999999999876 89999999932 35 258888752
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecC-CCC
Q 016501 187 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPT 246 (388)
Q Consensus 187 k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLS-NPt 246 (388)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||.
T Consensus 194 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 ----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp ----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred ----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1358899988 99999999999999999985 555776664 454
No 28
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.37 E-value=0.0073 Score=58.70 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=77.1
Q ss_pred chHHHHHHHHHHHHHHhCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCcc
Q 016501 106 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 184 (388)
Q Consensus 106 GTa~V~lAgll~Al~~~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~ 184 (388)
+-.-+|-.|++-.++-.+.+++..++|++|+|. .|.-+|.+|.. .| .++++++++ +
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~hs~--------t--- 193 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLL-----AG-------CTTTVTHRF--------T--- 193 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHT-----TT-------CEEEEECSS--------C---
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHH-----CC-------CeEEEEeCC--------c---
Confidence 334567888999999999999999999999995 69999998832 24 468888642 1
Q ss_pred HhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 185 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 185 ~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
.+|.+.++. +|++|+..+.++.+|+|+|| +.-+|+=++-|
T Consensus 194 -------------~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 194 -------------KNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp -------------SCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred -------------hhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 468899998 99999999999999999984 45577766654
No 29
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.33 E-value=0.0081 Score=58.02 Aligned_cols=90 Identities=10% Similarity=0.242 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHhCCCccccEEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh
Q 016501 108 ASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 186 (388)
Q Consensus 108 a~V~lAgll~Al~~~g~~L~d~riv~~GAG-sAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~ 186 (388)
.-+|-.|++..++-.+ |+..++|++|+| ..|..+|.+|.. .| .++++++++
T Consensus 132 ~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~-----~g-------AtVtv~~~~-------------- 183 (276)
T 3ngx_A 132 VPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLN-----RN-------YTVSVCHSK-------------- 183 (276)
T ss_dssp CCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHH-----TT-------CEEEEECTT--------------
T ss_pred CCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHH-----CC-------CeEEEEeCC--------------
Confidence 3467789999999999 999999999998 489999999932 25 358888752
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecC
Q 016501 187 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 187 k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
..+|.+.++. +|++|...+.++.+++++++ +.-+|+=++
T Consensus 184 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 222 (276)
T 3ngx_A 184 ----------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVG 222 (276)
T ss_dssp ----------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECC
T ss_pred ----------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEec
Confidence 1468899998 99999999999999998874 445666554
No 30
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.33 E-value=0.009 Score=57.99 Aligned_cols=94 Identities=18% Similarity=0.256 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHhCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhh
Q 016501 109 SVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK 187 (388)
Q Consensus 109 ~V~lAgll~Al~~~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k 187 (388)
-+|-.|++..|+-.+.+|+..++|++|+|. .|..+|.+|.. .| ..+++++++
T Consensus 142 PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~-----~g-------AtVtv~hs~--------------- 194 (286)
T 4a5o_A 142 PCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLL-----GG-------CTVTVTHRF--------------- 194 (286)
T ss_dssp CHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHH-----TT-------CEEEEECTT---------------
T ss_pred CCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHH-----CC-------CeEEEEeCC---------------
Confidence 357788999999999999999999999875 89999999932 24 357777642
Q ss_pred hhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEec-CCCC
Q 016501 188 KPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL-SNPT 246 (388)
Q Consensus 188 ~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaL-SNPt 246 (388)
..+|.+.++. +|++|+..+.++.++.|+|+ +.-+|+=+ +||.
T Consensus 195 ---------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 ---------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp ---------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred ---------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368899988 99999999999999999985 45577665 3664
No 31
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.31 E-value=0.024 Score=58.58 Aligned_cols=124 Identities=16% Similarity=0.242 Sum_probs=90.8
Q ss_pred cCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCC
Q 016501 102 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 181 (388)
Q Consensus 102 DDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~ 181 (388)
+.+.|+......|+ .+.+|..|...+++|+|.|..|.++|+.+ ..+ |+ +++.+|++.. +
T Consensus 234 r~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l-~~~----G~-------~Viv~d~~~~----~-- 292 (479)
T 1v8b_A 234 DNVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSM-KGL----GA-------RVYITEIDPI----C-- 292 (479)
T ss_dssp HHHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHH-HHH----TC-------EEEEECSCHH----H--
T ss_pred hchHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHH-HhC----cC-------EEEEEeCChh----h--
Confidence 55666666666662 36788899999999999999999999999 333 63 6888887521 0
Q ss_pred CccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 016501 182 SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 258 (388)
Q Consensus 182 ~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~ 258 (388)
.+. .....-...+|.|+++. .|++|.+....++++++.++.|. +.-||.=.|.-. .|++-++..+
T Consensus 293 ~~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 293 AIQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HHH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HHH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 000 01111112479999987 99999997777899999999997 677888888765 6778777766
No 32
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.22 E-value=0.0098 Score=57.00 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 191 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a 191 (388)
-.|++.+|+-.+.++++.+++|+|||.+|.+++..|.. .|. ++|+++|+. .+| .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46888999988889999999999999988888887732 364 679988874 111 222222222
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEEecCCC
Q 016501 192 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 219 (388)
Q Consensus 192 ~~-------~~~~~~L~eav~~vkptvlIG~S~~~ 219 (388)
.. .-+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478898887 99999887653
No 33
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.20 E-value=0.015 Score=60.23 Aligned_cols=114 Identities=17% Similarity=0.255 Sum_probs=80.9
Q ss_pred cCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCC
Q 016501 102 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 181 (388)
Q Consensus 102 DDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~ 181 (388)
+.+.|+......|+ .+.+|..|...+++|+|.|..|.++|+.+ .. .|+ +++.+|++.. +
T Consensus 254 r~~~~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l-~~----~G~-------~V~v~d~~~~----~-- 312 (494)
T 3d64_A 254 DNLYGCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSL-RG----LGA-------TVWVTEIDPI----C-- 312 (494)
T ss_dssp HHHHHHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHH-HT----TTC-------EEEEECSCHH----H--
T ss_pred hhhHhhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHH-HH----CCC-------EEEEEeCChH----h--
Confidence 33445444455552 36789999999999999999999999998 32 253 6888887521 0
Q ss_pred CccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 182 SLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 182 ~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
.+... ...-...+|.|+++. .|+++.+....++++++.++.|. +.-||.=.|...
T Consensus 313 ~~~a~-----~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 313 ALQAA-----MEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp HHHHH-----TTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred HHHHH-----HcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 00000 001112479999987 99999987667899999999997 677888888855
No 34
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.09 E-value=0.012 Score=57.49 Aligned_cols=95 Identities=22% Similarity=0.303 Sum_probs=74.9
Q ss_pred cchHHHHHHHHHHHHHHhCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCc
Q 016501 105 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 183 (388)
Q Consensus 105 qGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l 183 (388)
.|-.-+|-.|++..|+-.+.+|+..++|++|+|. .|..+|.+|.. .| ..+++++++ +
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~-----~g-------AtVtv~~~~--------T-- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMK-----EN-------ATVTIVHSG--------T-- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TT-------CEEEEECTT--------S--
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CeEEEEeCC--------C--
Confidence 3434568888999999999999999999999876 89999999932 25 258888862 1
Q ss_pred cHhhhhhccccCCCCCHH--HHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecC
Q 016501 184 QHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 184 ~~~k~~~a~~~~~~~~L~--eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
.+|. +.++. +|++|...+.++.++.++++ +.-+|+=++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1355 88988 99999999999999999874 555776554
No 35
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.01 E-value=0.1 Score=53.01 Aligned_cols=180 Identities=17% Similarity=0.185 Sum_probs=118.0
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchHH--HHHHHHcC---C--Cccccc----------CccchHHHHH
Q 016501 50 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T--HLVFND----------DIQGTASVVL 112 (388)
Q Consensus 50 ~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~af--~iL~ryr~---~--~~~FnD----------DiqGTa~V~l 112 (388)
.+.+|-..+...|++++.+.-||..-|-=+|++..-.. -+.+.|+. . ..++.- .-.-||-=+.
T Consensus 115 ~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 115 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCCHHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCCHHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 34566778889999999999899999999999983111 13355531 1 122221 1223555555
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCccccCCCCCccH---hhh
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQH---FKK 188 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~-l~D~~Glv~~~r~~~l~~---~k~ 188 (388)
-++-.+++-.|.+|+..||+|.|.|..|...|++|. +.| -+++ +.|++|.++...+=++.. ++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~-----e~G-------akVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLE-----KMG-------AKVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHH-----TTT-------CEEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHH-----HCC-------CEEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 667778888999999999999999999999998883 235 2455 999999998764212222 221
Q ss_pred h--------hcccc--CCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CCC
Q 016501 189 P--------WAHEH--EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTS 247 (388)
Q Consensus 189 ~--------~a~~~--~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt~ 247 (388)
. |.... ....+-.| +-.++.|+|+=+.. ++.+|++-.+.+ .-.||.--+| |++
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~t 326 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPTT 326 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCBC
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcCC
Confidence 1 11000 11101123 33468999997775 578998887776 5678988888 653
No 36
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.95 E-value=0.0048 Score=52.01 Aligned_cols=92 Identities=17% Similarity=0.326 Sum_probs=55.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
..||+|+|+|..|..++..|. +.|. + ++++|++ . +......+.|--+.....++.++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~-----~~g~------~-v~v~~r~----~---~~~~~~a~~~~~~~~~~~~~~~~~~~- 80 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFS-----YPQY------K-VTVAGRN----I---DHVRAFAEKYEYEYVLINDIDSLIKN- 80 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCC-----TTTC------E-EEEEESC----H---HHHHHHHHHHTCEEEECSCHHHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHH-----hCCC------E-EEEEcCC----H---HHHHHHHHHhCCceEeecCHHHHhcC-
Confidence 789999999999999988772 2352 4 8888873 1 11222222221111234678899887
Q ss_pred CCcEEEEecCCC-CCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 208 KPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 208 kptvlIG~S~~~-g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+|++|=+++.+ ..++.++++ +.-+|+-+++|.
T Consensus 81 -~Divi~at~~~~~~~~~~~l~------~g~~vid~~~p~ 113 (144)
T 3oj0_A 81 -NDVIITATSSKTPIVEERSLM------PGKLFIDLGNPP 113 (144)
T ss_dssp -CSEEEECSCCSSCSBCGGGCC------TTCEEEECCSSC
T ss_pred -CCEEEEeCCCCCcEeeHHHcC------CCCEEEEccCCc
Confidence 89998766543 234443332 455666677764
No 37
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.94 E-value=0.018 Score=55.73 Aligned_cols=97 Identities=14% Similarity=0.305 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh
Q 016501 108 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 186 (388)
Q Consensus 108 a~V~lAgll~Al~~~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~ 186 (388)
.-+|-.|++-.++-.|.+|+..++|++|+|. .|.-+|.+|. +.|. ..++++++|+ .
T Consensus 138 ~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~-----~~g~-----~atVtv~h~~--------t----- 194 (281)
T 2c2x_A 138 LPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLT-----RRSE-----NATVTLCHTG--------T----- 194 (281)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHT-----STTT-----CCEEEEECTT--------C-----
T ss_pred CCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHh-----cCCC-----CCEEEEEECc--------h-----
Confidence 3457778899999999999999999999996 5999888882 2210 1468887532 1
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 187 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 187 k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
.+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|-
T Consensus 195 -----------~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~r 235 (281)
T 2c2x_A 195 -----------RDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVSR 235 (281)
T ss_dssp -----------SCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEEE
T ss_pred -----------hHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCCC
Confidence 468999988 99999999999999999985 456888777653
No 38
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.68 E-value=0.011 Score=56.52 Aligned_cols=85 Identities=21% Similarity=0.229 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 191 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a 191 (388)
-.|++.+|+-.+.++++.|++|+|||.+|.+++..|. +.|. ++|++++|+. +|.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~-----~~G~------~~v~v~~R~~----~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELY-----KIVR------PTLTVANRTM----SRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHH-----TTCC------SCCEEECSCG----GGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHH-----HCCC------CEEEEEeCCH----HHHHHHHH---hcc
Confidence 3467788888899999999999999999999988883 3464 5788888752 22122221 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEEecCC
Q 016501 192 HEHEPVNNLLDAVKVIKPTILIGSSGV 218 (388)
Q Consensus 192 ~~~~~~~~L~eav~~vkptvlIG~S~~ 218 (388)
. ....++.++++. +|++|-++..
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~ 185 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPA 185 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC-
T ss_pred c--ccHhhHHHHhcC--CCEEEECccC
Confidence 0 112356777776 9999977654
No 39
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.66 E-value=0.35 Score=48.04 Aligned_cols=168 Identities=18% Similarity=0.181 Sum_probs=110.6
Q ss_pred ChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchH--HHHHHHHcC---CCccc---ccCccchHHHHHHHHHHHHHHh
Q 016501 51 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLI 122 (388)
Q Consensus 51 ~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~a--f~iL~ryr~---~~~~F---nDDiqGTa~V~lAgll~Al~~~ 122 (388)
+..+-++++..|.+.+.+..|+ -|-=+|++..-. --+.++|+- +-..+ .|--.-||-=+.-++-.+++..
T Consensus 91 s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 91 DPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred ChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 3345567788888888887765 577789986432 235667763 11122 2222336666666777888888
Q ss_pred CC-CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc-CCCCCH
Q 016501 123 GG-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNL 200 (388)
Q Consensus 123 g~-~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~-~~~~~L 200 (388)
|. +|+..+++|.|.|..|..+|+.+ .. .|+ +|++.|++- .| ..|++.. ...-++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l-~~----~Ga-------kVvvsD~~~----~~--------~~~a~~~ga~~v~~ 224 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLA-AE----AGA-------QLLVADTDT----ER--------VAHAVALGHTAVAL 224 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHH-HH----TTC-------EEEEECSCH----HH--------HHHHHHTTCEECCG
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHH-HH----CCC-------EEEEEeCCc----cH--------HHHHHhcCCEEeCh
Confidence 98 89999999999999999999988 32 363 677888741 11 2232211 111234
Q ss_pred HHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CCCCCC
Q 016501 201 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSE 250 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt~~~E 250 (388)
.+..+ ++.|+|+=+.+ .+.++++.++.| +-.+|.=-+| |+..+|
T Consensus 225 ~ell~-~~~DIliP~A~-~~~I~~~~~~~l----k~~iVie~AN~p~t~~e 269 (355)
T 1c1d_A 225 EDVLS-TPCDVFAPCAM-GGVITTEVARTL----DCSVVAGAANNVIADEA 269 (355)
T ss_dssp GGGGG-CCCSEEEECSC-SCCBCHHHHHHC----CCSEECCSCTTCBCSHH
T ss_pred HHhhc-CccceecHhHH-HhhcCHHHHhhC----CCCEEEECCCCCCCCHH
Confidence 45444 46899996654 579999999999 3568888888 654334
No 40
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.62 E-value=0.025 Score=53.83 Aligned_cols=110 Identities=21% Similarity=0.197 Sum_probs=73.8
Q ss_pred HHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCC
Q 016501 120 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN 199 (388)
Q Consensus 120 ~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~ 199 (388)
+..+..|.+.+++|+|+|..|..+|+.+. . .|+ +|+.+|+.- ++ +...+..-++ .....+
T Consensus 149 ~~~~~~l~g~~v~IiG~G~iG~~~a~~l~-~----~G~-------~V~~~d~~~----~~---~~~~~~~g~~-~~~~~~ 208 (300)
T 2rir_A 149 QHTDYTIHGSQVAVLGLGRTGMTIARTFA-A----LGA-------NVKVGARSS----AH---LARITEMGLV-PFHTDE 208 (300)
T ss_dssp HTCSSCSTTSEEEEECCSHHHHHHHHHHH-H----TTC-------EEEEEESSH----HH---HHHHHHTTCE-EEEGGG
T ss_pred HhcCCCCCCCEEEEEcccHHHHHHHHHHH-H----CCC-------EEEEEECCH----HH---HHHHHHCCCe-EEchhh
Confidence 44678999999999999999999999883 2 353 688888752 11 1111110011 001246
Q ss_pred HHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHh
Q 016501 200 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAY 257 (388)
Q Consensus 200 L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~ 257 (388)
|.+.++. .|++|-+.. .+.++++.++.|. +..+|+=+|.-. .++..+.+.
T Consensus 209 l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a~ 258 (300)
T 2rir_A 209 LKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYAE 258 (300)
T ss_dssp HHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHHH
T ss_pred HHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHHH
Confidence 8888876 999997665 4799999888886 677888888632 245555443
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.56 E-value=0.076 Score=52.88 Aligned_cols=102 Identities=16% Similarity=0.320 Sum_probs=64.3
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHh
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 204 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav 204 (388)
++.+.+++|+|+|..|..++..+. . .|+ ++|+++|+.. +| .....+.+--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~-~----~G~------~~V~v~~r~~----~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLV-D----RGV------RAVLVANRTY----ER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHH-H----HCC------SEEEEECSSH----HH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHH-H----CCC------CEEEEEeCCH----HH---HHHHHHHcCCceecHHhHHHHh
Confidence 578899999999999999999883 2 264 5799888741 11 1111112210111224688888
Q ss_pred cccCCcEEEEecCCC-CCCCHHHHHH--Hh-cCCCCcEEEecCCCC
Q 016501 205 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 246 (388)
Q Consensus 205 ~~vkptvlIG~S~~~-g~ft~evi~~--Ma-~~~~rPIIFaLSNPt 246 (388)
+. +|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 76 99999876654 3468888887 43 222344666677664
No 42
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=95.54 E-value=0.013 Score=60.21 Aligned_cols=124 Identities=19% Similarity=0.312 Sum_probs=71.3
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc-cC-----CCCCHHH
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HE-----PVNNLLD 202 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~-~~-----~~~~L~e 202 (388)
.||+|+||||.|.. ..|+..++...-++.. -..|+|+|.+ .+|.+.....-+..++. .. ...++.|
T Consensus 1 mKI~iIGaGs~~~t--~~l~~~~~~~~~l~~~--~~ei~L~Di~----~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFA--LQLVEDIAQTDELSRE--DTHIYLMDVH----ERRLNASYILARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHH--HHHHHHHHTCTTTCST--TCEEEEECSC----HHHHHHHHHHHHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhH--HHHHHHHHhhHhcCCC--CCEEEEECCC----HHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence 38999999997643 2232333332222210 1479999985 23311000011111111 11 1368999
Q ss_pred HhcccCCcEEEEecCC-------------------------------------C---CCCC--------HHHHHHHhcCC
Q 016501 203 AVKVIKPTILIGSSGV-------------------------------------G---RTFT--------KEVIEAMASFN 234 (388)
Q Consensus 203 av~~vkptvlIG~S~~-------------------------------------~---g~ft--------~evi~~Ma~~~ 234 (388)
|+++ +|++|=..++ + ++|- .|+++.|.++|
T Consensus 73 Al~g--AD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~ 150 (477)
T 3u95_A 73 AIEG--ADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMA 150 (477)
T ss_dssp HHTT--CSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHC
T ss_pred HhCC--CCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhC
Confidence 9998 9998843211 1 1222 68999999999
Q ss_pred CCcEEEecCCCCCCCCCCHHHHhcccCCcEE
Q 016501 235 EKPLILALSNPTSQSECTAEEAYTWSKGRAI 265 (388)
Q Consensus 235 ~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai 265 (388)
+.-+++=.|||. .-+|- -+.+.++=|+|
T Consensus 151 P~A~~in~tNP~--~i~t~-a~~~~~~~k~v 178 (477)
T 3u95_A 151 PKAYLMQTANPV--FEITQ-AVRRWTGANII 178 (477)
T ss_dssp TTCEEEECSSCH--HHHHH-HHHHHHCCCEE
T ss_pred CCeEEEEecChH--HHHHH-HHHHhCCCCeE
Confidence 999999999998 44443 34556654544
No 43
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.38 E-value=0.53 Score=47.71 Aligned_cols=179 Identities=17% Similarity=0.164 Sum_probs=119.4
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCch--HHHHHHHHcC---C--Cccc----------ccCccchHHHHH
Q 016501 50 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVF----------NDDIQGTASVVL 112 (388)
Q Consensus 50 ~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~--af~iL~ryr~---~--~~~F----------nDDiqGTa~V~l 112 (388)
.+.+|-..+...|++++.+.-||..-|-=+|++..- ---+.+.|+. . ..++ ++.-.-||-=+.
T Consensus 114 ~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 193 (415)
T 2tmg_A 114 LSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVK 193 (415)
T ss_dssp SCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHH
Confidence 345667778899999999988998888899998752 1223455521 1 1222 222234666666
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhh-hhhc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 191 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k-~~~a 191 (388)
-++-.+++-.|.+|+..||+|.|.|..|...|++|.. +.|. +=+-+.|++|-++... .|+... +.+.
T Consensus 194 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~--Gld~~~l~~~~ 261 (415)
T 2tmg_A 194 VCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPE--GFDVEELIRYK 261 (415)
T ss_dssp HHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCC--CCCHHHHHHHH
Confidence 6777888889999999999999999999999998832 1352 3344999999998765 343321 1122
Q ss_pred cccCC---C-----CCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 192 HEHEP---V-----NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 192 ~~~~~---~-----~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
+.... . -+-.+ +-.++.|+||=+.. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 262 ~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 262 KEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred HhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11110 0 12233 44578999998776 468898888776 4668888888 65
No 44
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.35 E-value=0.022 Score=54.62 Aligned_cols=87 Identities=23% Similarity=0.266 Sum_probs=58.0
Q ss_pred HHHHHHHHHhC-CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc
Q 016501 113 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 191 (388)
Q Consensus 113 Agll~Al~~~g-~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a 191 (388)
.|++.+++..| .+++..+++|+|+|.+|.+++..|. +.|. ++|+++|+. .+| .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~-----~~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLL-----STAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-----TTTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHH-----HCCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 7899999999999999999988873 2463 579988874 111 122222221
Q ss_pred c---ccCCCCCHHHHhcccCCcEEEEecCCC
Q 016501 192 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 219 (388)
Q Consensus 192 ~---~~~~~~~L~eav~~vkptvlIG~S~~~ 219 (388)
. ......++.++++. +|++|-+...+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011356677776 99999887654
No 45
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.17 E-value=0.005 Score=59.15 Aligned_cols=124 Identities=18% Similarity=0.310 Sum_probs=71.4
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCC-CCCHHHHhcccC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVIK 208 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~-~~~L~eav~~vk 208 (388)
||.|+|||+.|.++|..|.. .|. ...++++|.+---......++.+.. +|.....- ..+ .+++++
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 89999999999999987732 354 2479999986210000000111110 11111000 023 467877
Q ss_pred CcEEEEecCCCCC--------------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCC
Q 016501 209 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 270 (388)
Q Consensus 209 ptvlIG~S~~~g~--------------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGs 270 (388)
+|++|=+.+.+.. +-+++++.|.++++.-+|+-.|||. ....+.+.+.+.-.-++++|.
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~---~~~~~~~~~~~~~~rviG~gt 140 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPV---DLLTDLATQLAPGQPVIGSGT 140 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSH---HHHHHHHHHHSCSSCEEECTT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCch---HHHHHHHHHhCChhcEEeCCc
Confidence 9998855433321 2278889999888888888899997 344444555544445666653
No 46
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.09 E-value=0.07 Score=50.21 Aligned_cols=144 Identities=19% Similarity=0.287 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHhCC--------CeeeeeccCCCchHHHHH--HHHcCCCcccccCccchHHHHHHHHHHHHHHhCCCccc
Q 016501 59 LDEFMSAVKQNYGE--------KVLIQFEDFANHNAFELL--AKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAE 128 (388)
Q Consensus 59 vdefv~av~~~fGp--------~~~I~~EDf~~~~af~iL--~ryr~~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d 128 (388)
+++|++.++..|.+ ..++.+=|- ++.|..+= +-...+ .=+|=|- .|++.+|+-. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 56667666644432 134455555 66665440 000011 2334443 3677777644 5778
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 208 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vk 208 (388)
|++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|. ..|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la---~~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALD---FPVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCC---SSCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HHccc--CCHHHHHhhhcC--
Confidence 99999999999999888832 464 689999884 12211121 11110 123568888887
Q ss_pred CcEEEEecCCC-----CCCCHHHHHHHhcCCCCcEEEecC
Q 016501 209 PTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 209 ptvlIG~S~~~-----g~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+|++|-++..+ ..+..+.++ +..+|+-++
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Div 200 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVI 200 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEee
Confidence 99999766442 124444432 456666554
No 47
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.89 E-value=0.05 Score=53.32 Aligned_cols=96 Identities=19% Similarity=0.295 Sum_probs=64.9
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc----CCCCCHH
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 201 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~----~~~~~L~ 201 (388)
++..|++|+|||.+|.+++..+. . .| | +++++|++ .+| +...+..++..- ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~-~----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAV-G----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHH-H----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHH-h----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 66799999999999999998883 2 36 2 68988874 111 233333333210 1123577
Q ss_pred HHhcccCCcEEEEecCCCCC-----CCHHHHHHHhcCCCCcEEEecCCC
Q 016501 202 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g~-----ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
+.++. .|++|.+.+.++. ++++.++.|. +.-+|+=++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77875 9999998876542 5888888886 55677777754
No 48
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.84 E-value=1.2 Score=45.67 Aligned_cols=177 Identities=18% Similarity=0.220 Sum_probs=117.3
Q ss_pred ChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchHH--HHHHHHcC---C--Ccccc----------cCccchHHHHHH
Q 016501 51 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYGT---T--HLVFN----------DDIQGTASVVLA 113 (388)
Q Consensus 51 ~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~af--~iL~ryr~---~--~~~Fn----------DDiqGTa~V~lA 113 (388)
+..+...|-..||..+.+..||..-|-=+|++..... -+.+.|+. . .-++- +.-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 3456667777788888888999999999999876221 12334332 1 12221 122346655666
Q ss_pred HHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCc-cHh------
Q 016501 114 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------ 186 (388)
Q Consensus 114 gll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l-~~~------ 186 (388)
++-.+++-.|.+|+..||+|-|.|..|...|++|.. .|. +=+-+.|++|.|+... .+ ++.
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~ 282 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAE-----LGA------KAVTLSGPDGYIYDPE--GITTEEKINYML 282 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHH-----HTC------EEEEEEETTEEEECTT--CSCSHHHHHHHH
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEEeCCceEECCC--cCCCHHHHHHHH
Confidence 777888888999999999999999999999998843 252 3344799999988754 44 221
Q ss_pred --h-------hhhccc--cC--CCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 187 --K-------KPWAHE--HE--PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 187 --k-------~~~a~~--~~--~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
+ ..|.++ .+ +...+ . .++.|+|+=+.. ++.+|++-.+.+.+ |.-.+|.--+| |+
T Consensus 283 ~~k~~~~g~v~~y~~~~~a~~i~~~e~---~-~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 283 EMRASGRNKVQDYADKFGVQFFPGEKP---W-GQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHHCCCCTHHHHHHHTCEEEETCCG---G-GSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhccCCChhhcccccCCEEeCchhh---h-cCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 00 00112 2 468999998875 57999999999963 23579998888 66
No 49
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.81 E-value=0.039 Score=52.66 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=62.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccH---hhhhhcccc-CC-CCCHHHH
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAHEH-EP-VNNLLDA 203 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~---~k~~~a~~~-~~-~~~L~ea 203 (388)
.||.|+|+|+.|.++|..|.. .|+ ..+++++|++- ++.+.+.. +...+.... .- ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~-----~g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA-----QGV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 389999999999999999843 254 25799999852 11011110 001111100 10 2466 77
Q ss_pred hcccCCcEEEEecCCC-------CCC-----------CHHHHHHHhcCCCCcEEEecCCCC
Q 016501 204 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 204 v~~vkptvlIG~S~~~-------g~f-----------t~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+++ +|++|=+-..+ |-. -+++++.|.+++++.+|+-+|||.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~ 125 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPV 125 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcH
Confidence 876 99888544332 211 168899998888888888899997
No 50
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.81 E-value=0.06 Score=50.60 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=57.5
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhh-------hccc--------
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE-------- 193 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~-------~a~~-------- 193 (388)
.||.|+|+|..|.+||..+.. .|. +++++|++- +.+...+.. +..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~-----~G~-------~V~l~d~~~-------~~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF-----HGF-------AVTAYDINT-------DALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSH-------HHHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCH-------HHHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 689999999999999999843 363 688888751 111211111 1100
Q ss_pred -------cCCCCCHHHHhcccCCcEEEEecCCCC-CCCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 194 -------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 194 -------~~~~~~L~eav~~vkptvlIG~S~~~g-~ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
-....++.+++++ +|++|=+ .... ...+++++.+.++.+.-.|+ .||-.+
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~a-v~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~ 123 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEA-VPESLDLKRDIYTKLGELAPAKTIF-ATNSST 123 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE-EECCSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEe-ccCcHHHHHHHHHHHHhhCCCCcEE-EECCCC
Confidence 0123689999987 9999843 2221 15567777776655444444 345443
No 51
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.80 E-value=0.083 Score=51.02 Aligned_cols=101 Identities=23% Similarity=0.310 Sum_probs=66.5
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCC---CCCHHHHhc
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 205 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~---~~~L~eav~ 205 (388)
||+|+|| |..|..++.+|+ +.|+ ...++++|.+-. .....+|.+...+ .+ -.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~-----~~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~~-l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK-----NSPL-----VSRLTLYDIAHT--PGVAADLSHIETR-AT-VKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH-----TCTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-CE-EEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHH-----hCCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-ce-EEEecCCCCHHHHhC
Confidence 8999998 999999988773 2354 357999998751 0000112211100 00 011 136889999
Q ss_pred ccCCcEEEEecCCC---C-----------CCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 206 VIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 206 ~vkptvlIG~S~~~---g-----------~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+ +|++|=+.+.+ | ...+++++.|.++++..+|+=.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 8 99998554443 2 24677888888899998988899997
No 52
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.71 E-value=0.2 Score=51.82 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=77.5
Q ss_pred HHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc-cCCCC
Q 016501 120 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 198 (388)
Q Consensus 120 ~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~-~~~~~ 198 (388)
|..+..+...+|+|+|+|..|.++|..+ .. .|+ +|+.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~l-ka----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAM-KG----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHH-HH----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHH-HH----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 4566788999999999999999999988 32 362 688888641 11112221 11124
Q ss_pred CHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 016501 199 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 258 (388)
Q Consensus 199 ~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~ 258 (388)
++.++++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888876 99999988877889999999996 677888888765 4676665543
No 53
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.69 E-value=0.046 Score=53.24 Aligned_cols=124 Identities=16% Similarity=0.220 Sum_probs=75.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCC---CCCHHHHhc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 205 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~---~~~L~eav~ 205 (388)
.||.|+|||+.|.++|.+|.. .|+ -+++++|.+-=..+.-..++.+... +...... ..++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~-----~g~------~~V~L~D~~~~~~~~~~~~l~~~~~-~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCAL-----REL------ADVVLYDVVKGMPEGKALDLSHVTS-VVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC------CEEEEECSSSSHHHHHHHHHHHHHH-HTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECChhHHHHHHHHHHhhhh-ccCCCCEEEEeCCHHHHhC
Confidence 589999999999999999943 253 1399999862100000011222211 1111111 268988998
Q ss_pred ccCCcEEEEecCCC---CC----------------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhccc--CCcE
Q 016501 206 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRA 264 (388)
Q Consensus 206 ~vkptvlIG~S~~~---g~----------------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t--~Gra 264 (388)
+ +|++|=+-+.+ |. +-+++.+.|.++++.-+|+=-|||... ..+-+.+.+ .-.-
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~---~t~~~~~~~~~~~~r 152 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC---MVKVMCEASGVPTNM 152 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGG
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH---HHHHHHHhcCCChhc
Confidence 8 99998654333 22 247889999999999898888999732 344444443 2223
Q ss_pred EEeeC
Q 016501 265 IFASG 269 (388)
Q Consensus 265 i~AtG 269 (388)
++++|
T Consensus 153 viG~g 157 (331)
T 1pzg_A 153 ICGMA 157 (331)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 55554
No 54
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.61 E-value=0.36 Score=50.12 Aligned_cols=180 Identities=19% Similarity=0.246 Sum_probs=118.4
Q ss_pred CCChhhhHHHHHHHHHHHHH--HhCCCeeeeeccCCCchHH--HHHHHHcC--CC-------cccc---------cCccc
Q 016501 49 RATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAF--ELLAKYGT--TH-------LVFN---------DDIQG 106 (388)
Q Consensus 49 R~~g~~y~~~vdefv~av~~--~fGp~~~I~~EDf~~~~af--~iL~ryr~--~~-------~~Fn---------DDiqG 106 (388)
..+..|-..+.-.||+.+.+ ..||..-|-=+|++..-.. -+.+.|+. .. ++-- +--.-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 34667888889999999985 7899999999999875332 36777752 11 1111 11223
Q ss_pred hHHHHHHHHHH------HHHHhCC--CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccC
Q 016501 107 TASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS 178 (388)
Q Consensus 107 Ta~V~lAgll~------Al~~~g~--~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~ 178 (388)
||-=+.-++-. +++..|. +|+..||+|-|.|..|...|++|.. .|. +=+-+.|++|-|+..
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e-----~Ga------kVVavsDs~G~iyd~ 283 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHR-----FGA------KCITVGESDGSIWNP 283 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHH-----TTC------EEEEEECSSCEEECT
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHH-----CCC------EEEEEEcCCceEECC
Confidence 44444444443 3456685 5899999999999999999999932 362 446689999999976
Q ss_pred CCCCccH-----hhhhhcccc--CCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 179 RKDSLQH-----FKKPWAHEH--EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 179 r~~~l~~-----~k~~~a~~~--~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
. +++. ++...-.-. +....+.+.+-.++.||||=|..+ +.+|++-++.+ .-.||.--+| |+
T Consensus 284 ~--Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 284 D--GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp T--CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred C--CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 5 4443 222211100 100001112445789999988876 79999988877 4789999999 54
No 55
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.51 E-value=0.081 Score=49.95 Aligned_cols=98 Identities=16% Similarity=0.252 Sum_probs=66.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
..||.|+|+|..|.++|..|.. .|.+ ..+|+++|++- +.+...++.|- -....++.++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-----~g~~----~~~V~v~dr~~-------~~~~~l~~~~g--i~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-----NGYD----PNRICVTNRSL-------DKLDFFKEKCG--VHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-----TTCC----GGGEEEECSSS-------HHHHHHHHTTC--CEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHH-----CCCC----CCeEEEEeCCH-------HHHHHHHHHcC--CEEeCChHHHHhc-
Confidence 4689999999999999998843 4653 35799888741 22333322221 1123578999987
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHhcC--CCCcEEEecCCCCC
Q 016501 208 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTS 247 (388)
Q Consensus 208 kptvlIG~S~~~g~ft~evi~~Ma~~--~~rPIIFaLSNPt~ 247 (388)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 89888 44433 4567888888764 45668888888774
No 56
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.45 E-value=0.082 Score=48.61 Aligned_cols=109 Identities=15% Similarity=0.220 Sum_probs=62.3
Q ss_pred hCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc--ccCCCCCccHh-hhhhcccc--CC
Q 016501 122 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQHF-KKPWAHEH--EP 196 (388)
Q Consensus 122 ~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv--~~~r~~~l~~~-k~~~a~~~--~~ 196 (388)
...++...||.|+|+|..|.++|..|.. .| .+++++|++-=- .......+... ...++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~-----~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALAD-----LG-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 4567889999999999999999999843 35 368888875321 00000011100 12232221 12
Q ss_pred CCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHH-hcCCCCcEEEecCCCC
Q 016501 197 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 246 (388)
Q Consensus 197 ~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~M-a~~~~rPIIFaLSNPt 246 (388)
..++.|+++. +|++| ++... --..++++.+ +..-+..||.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~-~~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEG-ASSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCG-GGHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCc-HHHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3579999988 99988 44333 2344666665 3333677999999974
No 57
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.33 E-value=0.084 Score=52.51 Aligned_cols=159 Identities=14% Similarity=0.132 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHhCCCeeeeeccCCCchHHHHHHHHcCCCcc-------c---ccCccchHHHHHHHHHHHHHH-hCC
Q 016501 56 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLV-------F---NDDIQGTASVVLAGVVAALKL-IGG 124 (388)
Q Consensus 56 ~~~vdefv~av~~~fGp~~~I~~EDf~~~~af~iL~ryr~~~~~-------F---nDDiqGTa~V~lAgll~Al~~-~g~ 124 (388)
++++..|.+.+.+..|+ .|-=+|++..-- .+...-+++.+ + .|--.-||.=+.-++..+++. .|.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677788888887765 567788876432 33333333311 1 111123554444555666665 476
Q ss_pred -CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHH
Q 016501 125 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 203 (388)
Q Consensus 125 -~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~ea 203 (388)
+|++.+|+|.|+|..|..+|+.|.. .|. ++++.|++ + +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~-----~Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNT-----EGA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHH-----CCC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 8999999999999999999999832 363 58888853 1 22333333321 111133333
Q ss_pred hcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC-CC
Q 016501 204 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 246 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN-Pt 246 (388)
.. .+.|++|=+.. .+.++++.++.| .-.+|.--+| |+
T Consensus 227 l~-~~~DIvip~a~-~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 YG-VTCDIFAPCAL-GAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-CCCSEEEECSC-SCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred hc-cCCcEeeccch-HHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 32 56899996654 579999988888 3567777777 54
No 58
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.32 E-value=0.028 Score=54.21 Aligned_cols=114 Identities=18% Similarity=0.223 Sum_probs=71.3
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc--CCCCCHHHHhccc
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 207 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~--~~~~~L~eav~~v 207 (388)
||.|+|||+.|.++|.+|.. .|+ ..++.++|.+-=..+...-+|.+...+|-.+. ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~-----~~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLL-----NLD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----HSC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 89999999999999988843 254 24799999853111100012323222222111 11235 889988
Q ss_pred CCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 208 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 208 kptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+|++|=+.+.+ |- +-+++++.|.++++.-+|+-.|||. .+..+-+++.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv---d~~t~~~~k~ 131 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKE 131 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc---hHHHHHHHHh
Confidence 99887554443 22 1257778899999999999999997 3445555544
No 59
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=94.28 E-value=0.098 Score=49.15 Aligned_cols=84 Identities=19% Similarity=0.303 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 191 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a 191 (388)
..|++.+++-.|.+++..|++|+|+|.+|.++|..|.. .| . +|+++|++- +| .......|-
T Consensus 113 ~~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~-----~g------~-~V~v~~r~~----~~---~~~l~~~~g 173 (275)
T 2hk9_A 113 WIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVK-----EG------A-KVFLWNRTK----EK---AIKLAQKFP 173 (275)
T ss_dssp HHHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHH-----HT------C-EEEEECSSH----HH---HHHHTTTSC
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----cC------C-EEEEEECCH----HH---HHHHHHHcC
Confidence 34888899888889999999999999999999998843 25 2 688888741 11 111111110
Q ss_pred cccCCCCCHHHHhcccCCcEEEEecCC
Q 016501 192 HEHEPVNNLLDAVKVIKPTILIGSSGV 218 (388)
Q Consensus 192 ~~~~~~~~L~eav~~vkptvlIG~S~~ 218 (388)
.....++.++++. +|++|-+...
T Consensus 174 --~~~~~~~~~~~~~--aDiVi~atp~ 196 (275)
T 2hk9_A 174 --LEVVNSPEEVIDK--VQVIVNTTSV 196 (275)
T ss_dssp --EEECSCGGGTGGG--CSEEEECSST
T ss_pred --CeeehhHHhhhcC--CCEEEEeCCC
Confidence 0112368888876 9999976654
No 60
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.15 E-value=0.37 Score=48.22 Aligned_cols=135 Identities=14% Similarity=0.176 Sum_probs=94.8
Q ss_pred eeeccCCCchH-HHHHHHHcCCCcccccCcc---chHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHH
Q 016501 76 IQFEDFANHNA-FELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEI 151 (388)
Q Consensus 76 I~~EDf~~~~a-f~iL~ryr~~~~~FnDDiq---GTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~ 151 (388)
|+--..+..|- ...+. +..|.+.|---- .+|=-+++.+++..|-.|..|.+.+|.|+|.|..|-.+|+.+. .
T Consensus 62 I~~~~~G~D~iD~~~~~--~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~-~- 137 (380)
T 2o4c_A 62 VGTCTIGTDHLDLDYFA--EAGIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLR-G- 137 (380)
T ss_dssp EEECSSCSTTBCHHHHH--HHTCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHH-H-
T ss_pred EEEcCcccchhhHHHHH--hCCCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHH-H-
Confidence 66666666652 12222 246888875433 3444589999999999999999999999999999999999983 3
Q ss_pred HHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec---C-----CCCCCC
Q 016501 152 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFT 223 (388)
Q Consensus 152 ~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S---~-----~~g~ft 223 (388)
.|+ +++.+|+..- . .. ......+|.|+++. .|+++=+- . ..++|+
T Consensus 138 ---~G~-------~V~~~d~~~~----~--------~~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~ 190 (380)
T 2o4c_A 138 ---LGW-------KVLVCDPPRQ----A--------RE---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLD 190 (380)
T ss_dssp ---TTC-------EEEEECHHHH----H--------HS---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBC
T ss_pred ---CCC-------EEEEEcCChh----h--------hc---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcC
Confidence 364 5888886421 0 00 01123579999987 99988542 1 236899
Q ss_pred HHHHHHHhcCCCCcEEEecCC
Q 016501 224 KEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 224 ~evi~~Ma~~~~rPIIFaLSN 244 (388)
++.++.|. +..++.=.|+
T Consensus 191 ~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 191 EPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HHHHHTSC---TTEEEEECSC
T ss_pred HHHHhhCC---CCcEEEECCC
Confidence 99999986 6778887775
No 61
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=94.11 E-value=0.31 Score=48.89 Aligned_cols=120 Identities=10% Similarity=0.101 Sum_probs=89.6
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
..|.+.|--- +.+|=-+++.+++..|-.|..|.+.+|.|+|.|..|-.+|+.+ .. .|+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l-~a----~G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRL-EA----LGI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHH-HH----TTC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHH-HH----CCC-------EEEEECC
Confidence 4777777643 3455568999999999999999999999999999999999999 33 265 6888886
Q ss_pred CCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC--------CCCCCCHHHHHHHhcCCCCcEEEecC
Q 016501 172 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 172 ~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~--------~~g~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
.. .. .. ......+|.|+++. .|+++=.-- ..++|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~~-~~----------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----AA-RG----------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----HH-TT----------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----HH-hc----------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 31 00 00 11234689999988 999884421 34689999999997 778988888
Q ss_pred CCC
Q 016501 244 NPT 246 (388)
Q Consensus 244 NPt 246 (388)
.-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 744
No 62
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.11 E-value=0.09 Score=50.26 Aligned_cols=99 Identities=19% Similarity=0.202 Sum_probs=63.5
Q ss_pred HHHHHHHHH-HHhCCCeeeeeccCCCchHHHHHHHHcC--------CCcccccC--ccchHHHHHHHHHHHHHHhCCCcc
Q 016501 59 LDEFMSAVK-QNYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD--IQGTASVVLAGVVAALKLIGGTLA 127 (388)
Q Consensus 59 vdefv~av~-~~fGp~~~I~~EDf~~~~af~iL~ryr~--------~~~~FnDD--iqGTa~V~lAgll~Al~~~g~~L~ 127 (388)
+.++++.++ ..|.+ ++.--=-...+++++|+..+ +-.++++| ..|.-.= ..|++.+|+-.|.+++
T Consensus 50 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~ 125 (281)
T 3o8q_A 50 FTEAAKHFFAQGGRG---CNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLK 125 (281)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTSHHHHHHHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHhCCCCE---EEECCccHHHHHHHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCcc
Confidence 456666665 34544 44433233345556555432 22344544 3442211 4678888988899999
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+++|+|||.+|.+++..|. +.|. ++|++++++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~-----~~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLL-----DQQP------ASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-----TTCC------SEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHH-----hcCC------CeEEEEECC
Confidence 999999999999988888773 2464 579988874
No 63
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=94.05 E-value=0.08 Score=50.85 Aligned_cols=104 Identities=19% Similarity=0.275 Sum_probs=65.8
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 192 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~ 192 (388)
.|++.+|+-.|.++++.+++|+|||.+|.+++..|.. .|. ++|++++|. .+| .......+.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~k---a~~La~~~~- 167 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEK---TSEIYGEFK- 167 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHH---HHHHCTTSE-
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHH---HHHHHHhcC-
Confidence 7889999988999999999999999999999888832 364 689988874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEecCCC--C-----CCCHHHHHHHhcCCCCcEEEecC-CCC
Q 016501 193 EHEPVNNLLDAVKVIKPTILIGSSGVG--R-----TFTKEVIEAMASFNEKPLILALS-NPT 246 (388)
Q Consensus 193 ~~~~~~~L~eav~~vkptvlIG~S~~~--g-----~ft~evi~~Ma~~~~rPIIFaLS-NPt 246 (388)
.....+|.+ + ++|++|-++..| + .+..+.++ +..+|+=+. ||.
T Consensus 168 -~~~~~~l~~-l---~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 168 -VISYDELSN-L---KGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp -EEEHHHHTT-C---CCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred -cccHHHHHh-c---cCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 001122333 2 699999877553 1 13444443 566777665 764
No 64
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=93.95 E-value=0.03 Score=57.22 Aligned_cols=128 Identities=13% Similarity=0.191 Sum_probs=79.8
Q ss_pred ccEEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc--ccC----CCCCH
Q 016501 128 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--EHE----PVNNL 200 (388)
Q Consensus 128 d~riv~~GAGsA-g~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~--~~~----~~~~L 200 (388)
..||.|+|||+. +.+++..|+. ...++. ...++|+|.+-- ++|.+.+.+....+.. ..+ ...++
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~---~~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~ 77 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIK---RYHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDR 77 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHH---TTTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHc---CCCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCH
Confidence 369999999997 5555555522 114542 367999998530 0111111222222211 111 12589
Q ss_pred HHHhcccCCcEEEEecCCCCC----------------------------------CCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 201 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~g~----------------------------------ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
.+++++ +|++|=..++++. .-+++++.|.++|+.-+|+=.|||.
T Consensus 78 ~eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPv 155 (450)
T 1s6y_A 78 RRALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA 155 (450)
T ss_dssp HHHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HHHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999998 9999866554321 1358899999999999999999997
Q ss_pred CCCCCCHHHHhcccCCcEEEeeC
Q 016501 247 SQSECTAEEAYTWSKGRAIFASG 269 (388)
Q Consensus 247 ~~~E~tpe~A~~~t~Grai~AtG 269 (388)
-+-.+-+++.+.-.-+|++|
T Consensus 156 ---divT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 156 ---GMVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHHhCCCCCEEEeC
Confidence 34455566666443677765
No 65
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.90 E-value=0.1 Score=50.95 Aligned_cols=91 Identities=24% Similarity=0.301 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 191 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a 191 (388)
-.|++.+|+-.|.++++.+++|+|||.+|.+++..|.. .|. ++|++++|.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46778888888999999999999999988888888832 464 6899998852 10011111111221
Q ss_pred cc---------cCCCCCHHHHhcccCCcEEEEecCCC
Q 016501 192 HE---------HEPVNNLLDAVKVIKPTILIGSSGVG 219 (388)
Q Consensus 192 ~~---------~~~~~~L~eav~~vkptvlIG~S~~~ 219 (388)
.. -++..+|.+.++. +|++|-++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 11 0111236677776 99999777653
No 66
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.90 E-value=0.087 Score=53.92 Aligned_cols=106 Identities=16% Similarity=0.279 Sum_probs=67.8
Q ss_pred ccccEEEEeCcchH--HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc---CCCCCH
Q 016501 126 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNL 200 (388)
Q Consensus 126 L~d~riv~~GAGsA--g~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~---~~~~~L 200 (388)
.+..||.|+||||. |.|++..|+. ...+ . ..|+|+|.+- +|.+.+....+.+.+.. ....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~----~~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSI----DERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHH----CSSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHh----cccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 7899988842 1222 2 3899999862 11000111111111100 123689
Q ss_pred HHHhcccCCcEEEEecCCC---------------CC---------------------CCHHHHHHHhcCCCCcEEEecCC
Q 016501 201 LDAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~---------------g~---------------------ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
.||+++ +|++|=.-.+| |. .-.++++.|.++|++-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 99888444322 22 13578888999999999999999
Q ss_pred CC
Q 016501 245 PT 246 (388)
Q Consensus 245 Pt 246 (388)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 67
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.87 E-value=0.11 Score=50.03 Aligned_cols=120 Identities=15% Similarity=0.262 Sum_probs=74.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc-CCCCCHHHHhccc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKVI 207 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~-~~~~~L~eav~~v 207 (388)
.||.|+|||..|.++|..++.. |+ -..++|+|.+-= ..+...++.+ +.... ....++ +++++
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998432 54 268999998631 1111112221 21111 112567 77888
Q ss_pred CCcEEEEecCCC--C-----------CCCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEEEeeC
Q 016501 208 KPTILIGSSGVG--R-----------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 269 (388)
Q Consensus 208 kptvlIG~S~~~--g-----------~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~--Grai~AtG 269 (388)
+|++|=..+.+ | -+-+++++.|.++++.-+|+=.|||.. +..+-+++.+. -.-+|++|
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rviG~g 150 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVIGIG 150 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEEECT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHeeCCC
Confidence 99998554332 1 024678899999999999988999972 44455555321 12466765
No 68
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=93.87 E-value=0.096 Score=50.98 Aligned_cols=90 Identities=26% Similarity=0.329 Sum_probs=58.3
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 192 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~ 192 (388)
.|++.+|+-.|.++++.+++|+|||.+|.+++..|.. .|. ++|++++|. .+|.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888999999999999999999999888832 464 689988874 1110111111122211
Q ss_pred c------cCCCCCH---HHHhcccCCcEEEEecCCC
Q 016501 193 E------HEPVNNL---LDAVKVIKPTILIGSSGVG 219 (388)
Q Consensus 193 ~------~~~~~~L---~eav~~vkptvlIG~S~~~ 219 (388)
. ..+..++ .+.++. +|++|-++..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 667776 99999877653
No 69
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.83 E-value=0.032 Score=53.90 Aligned_cols=115 Identities=16% Similarity=0.248 Sum_probs=69.2
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCC-CCCHHHHhccc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVI 207 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~-~~~L~eav~~v 207 (388)
.||.|+|||..|.++|..|.. .|+ ...|+++|.+--..+....++.+. .++...... ..+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~-----~~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMN-----QGI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HTC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 699999999999999977732 254 257999998621111000112221 112110000 0234677887
Q ss_pred CCcEEEEecCCCC--------------CCCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 208 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 208 kptvlIG~S~~~g--------------~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+|++|=+.+.+. ...+++++.|.++++.-++|=.|||. -...+-+++.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv---~~~~~~~~~~ 136 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV---DILTYATWKF 136 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch---HHHHHHHHHH
Confidence 999985544432 23467888888889888888899997 3344445443
No 70
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.82 E-value=0.043 Score=53.39 Aligned_cols=128 Identities=16% Similarity=0.238 Sum_probs=74.3
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc--CCCCCHHHHhcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~--~~~~~L~eav~~ 206 (388)
.||.|+|||+.|.++|.++.. .|+ -+++++|.+-=.......++.+...++.... ....++ +++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 589999999999999988832 354 1399999862100000011222211111110 112467 88887
Q ss_pred cCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhccc--CCcEEEeeCC
Q 016501 207 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 270 (388)
Q Consensus 207 vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t--~Grai~AtGs 270 (388)
+|++|=+-+.+ |. +-+++.+.+.++++.-+|+=-|||.. ...+-+.+.+ .-.-++++|+
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~---~~t~~~~~~~~~~~~rviG~~t 157 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD---AMVYYFKEKSGIPANKVCGMSG 157 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH---HHHHHHHHHHCCCGGGEEESCH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchH---HHHHHHHHhcCCChhhEEEeCc
Confidence 99988554322 21 25678888888898888776799983 2344444433 2344666664
Q ss_pred CCC
Q 016501 271 PFD 273 (388)
Q Consensus 271 pf~ 273 (388)
+.+
T Consensus 158 ~Ld 160 (328)
T 2hjr_A 158 VLD 160 (328)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 71
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.81 E-value=0.05 Score=52.19 Aligned_cols=99 Identities=13% Similarity=0.300 Sum_probs=64.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCC----CccHhhhhhccccC---CCCCHH
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHE---PVNNLL 201 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~----~l~~~k~~~a~~~~---~~~~L~ 201 (388)
.||.|+|||+.|.++|..|... |+ .+++++|++- ++.+ ++.+. ..+..... ...++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998432 54 2599999852 1101 11111 11111011 11467
Q ss_pred HHhcccCCcEEEEecCCCC--------------CCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 202 DAVKVIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g--------------~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+++++ +|++|=+-+.+. -+.+++++.+.++++.-||+-.|||.
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~ 124 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPL 124 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 78887 999885553332 13468888888889999999999997
No 72
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.78 E-value=0.038 Score=53.69 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=73.0
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCC----CCccHhhhhhcccc--CCCCCHHH
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK----DSLQHFKKPWAHEH--EPVNNLLD 202 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~----~~l~~~k~~~a~~~--~~~~~L~e 202 (388)
.||.|+|||+.|.++|.+|.. .|+- +++|+|.+ .++. .++.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-----~g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-----KNLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 589999999999999998843 3541 39999975 1210 11111111111110 111567 8
Q ss_pred HhcccCCcEEEEecCCC---CC----------------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhccc--C
Q 016501 203 AVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--K 261 (388)
Q Consensus 203 av~~vkptvlIG~S~~~---g~----------------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t--~ 261 (388)
++++ +|++|=+.+.+ |. +-+++.+.|.++++.-+|+=.|||... ..+-+.+.+ .
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~---~t~~~~~~~g~~ 143 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV---MVQLLHQHSGVP 143 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH---HHHHHHHHHCCC
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH---HHHHHHHhcCCC
Confidence 8888 99998554333 21 357788889899988888777999842 244444443 2
Q ss_pred CcEEEeeC
Q 016501 262 GRAIFASG 269 (388)
Q Consensus 262 Grai~AtG 269 (388)
-.-++++|
T Consensus 144 ~~rviG~g 151 (322)
T 1t2d_A 144 KNKIIGLG 151 (322)
T ss_dssp GGGEEECC
T ss_pred hHHEEecc
Confidence 33456655
No 73
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.76 E-value=0.11 Score=48.13 Aligned_cols=80 Identities=24% Similarity=0.299 Sum_probs=54.9
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 192 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~ 192 (388)
.|++.+++-.|.++++ |++|+|+|.+|..+|..|.. .|. +++++|++- +| .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~~----~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRTP----QR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSH----HH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999988832 352 688888741 11 1222122211
Q ss_pred ccCCCCCHHHHhcccCCcEEEEecCC
Q 016501 193 EHEPVNNLLDAVKVIKPTILIGSSGV 218 (388)
Q Consensus 193 ~~~~~~~L~eav~~vkptvlIG~S~~ 218 (388)
. ..++.++ +. +|++|-+...
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~ 181 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRV 181 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSST
T ss_pred c---hhhHhhc-cC--CCEEEEccCC
Confidence 1 3467777 65 9999976654
No 74
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.69 E-value=0.11 Score=51.06 Aligned_cols=97 Identities=22% Similarity=0.347 Sum_probs=61.7
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc----cCCCCCH
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 200 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~----~~~~~~L 200 (388)
.+...+++|+|+|..|..+|+.+. . .|. +++++|++- + .+...+..+... .....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~-~----~Ga-------~V~~~d~~~----~---~~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIAL-G----MGA-------QVTILDVNH----K---RLQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHH-H----TTC-------EEEEEESCH----H---HHHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-h----CCC-------EEEEEECCH----H---HHHHHHHhcCceEEEecCCHHHH
Confidence 378899999999999999999883 2 362 688888741 1 122111112110 0122468
Q ss_pred HHHhcccCCcEEEEecCCCC-----CCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 201 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~g-----~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
.++++. .|++|.+.+.++ +++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 888886 999999876543 46899999996 45566666644
No 75
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.65 E-value=0.051 Score=52.50 Aligned_cols=117 Identities=13% Similarity=0.248 Sum_probs=72.6
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc-cccCCCCCHHHHhc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 205 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a-~~~~~~~~L~eav~ 205 (388)
...||.|+|||+.|..+|-.|.. .|+ -..++|+|.+-=..+....+|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~-----~~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVN-----QSI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----HCS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 45799999999999999888732 254 258999997520000000123332 2333 11110124578888
Q ss_pred ccCCcEEEEecCCCCC--------------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 206 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 206 ~vkptvlIG~S~~~g~--------------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+ +|++|=+.+.+.. +=+++++.|.++++.-+|+=.|||. -...+-+++.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~t~~~~k~ 136 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV---DILAYATWKF 136 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHH
Confidence 8 9999855544422 2246778888899999999999997 3444555554
No 76
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=93.62 E-value=0.075 Score=54.81 Aligned_cols=124 Identities=16% Similarity=0.158 Sum_probs=76.7
Q ss_pred ccEEEEeCcchHH--HHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc---c---CCCCC
Q 016501 128 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNN 199 (388)
Q Consensus 128 d~riv~~GAGsAg--~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~---~---~~~~~ 199 (388)
..||.|+|||+.| .++|..|+. ..++ +...++|+|.+- ++.+.+......+... . ....+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~----~~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCK----TPGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHT----CGGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHh----cCcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4689999999965 545666632 1122 136799999853 1111111111222111 1 11258
Q ss_pred HHHHhcccCCcEEEEecCC---------------CCCCC-------------------------HHHHHHHhcCCCCcEE
Q 016501 200 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 239 (388)
Q Consensus 200 L~eav~~vkptvlIG~S~~---------------~g~ft-------------------------~evi~~Ma~~~~rPII 239 (388)
+.+++++ +|++|=..++ .|.|. +++++.|.++|+.-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 9999998 9998855432 13333 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhcccCCcEEEeeC
Q 016501 240 LALSNPTSQSECTAEEAYTWSKGRAIFASG 269 (388)
Q Consensus 240 FaLSNPt~~~E~tpe~A~~~t~Grai~AtG 269 (388)
+=.|||. -+..+-+.++..- -+|++|
T Consensus 149 i~~TNPv---di~t~~~~k~p~~-rviG~c 174 (480)
T 1obb_A 149 LQAANPI---FEGTTLVTRTVPI-KAVGFC 174 (480)
T ss_dssp EECSSCH---HHHHHHHHHHSCS-EEEEEC
T ss_pred EEeCCcH---HHHHHHHHHCCCC-cEEecC
Confidence 9999998 3455555665444 566654
No 77
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.62 E-value=0.059 Score=51.70 Aligned_cols=124 Identities=15% Similarity=0.250 Sum_probs=75.1
Q ss_pred cEEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CCccccCCCCCccHhhhhhccccCC-CCCHHHHh
Q 016501 129 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAV 204 (388)
Q Consensus 129 ~riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~--~Glv~~~r~~~l~~~k~~~a~~~~~-~~~L~eav 204 (388)
.||+|.| +|..|..++.+|.. .|+ ...+.|+|. +-=-.+.-..+|.+... +.++..- .++ .+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGG
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHh
Confidence 3899999 99999999888732 243 256999998 31000000012222211 1111100 023 6778
Q ss_pred cccCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEEEee
Q 016501 205 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFAS 268 (388)
Q Consensus 205 ~~vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~--Grai~At 268 (388)
++ +|++|=+.+.+ |- .++++++.|.+++.+.+|+--|||. ....+-+++.+. -.-+|++
T Consensus 69 ~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv---~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 69 AG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV---DLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH---HHHHHHHHHHSSSCGGGEEEC
T ss_pred CC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH---HHHHHHHHHHcCCCHHHeeec
Confidence 87 99998666544 22 4678889999999999999999997 445555555431 1245665
Q ss_pred C
Q 016501 269 G 269 (388)
Q Consensus 269 G 269 (388)
|
T Consensus 144 g 144 (303)
T 1o6z_A 144 G 144 (303)
T ss_dssp C
T ss_pred c
Confidence 4
No 78
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.61 E-value=0.054 Score=52.78 Aligned_cols=127 Identities=15% Similarity=0.262 Sum_probs=75.1
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
..||.|+|||+.|..++-+|.. .++ ...++|+|.+-=-.+....+|.+.. +|..+..-..+-.+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~-----~~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVL-----QGI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HTC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHc-----CCC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 3699999999999999888733 244 2689999984100000001122211 232211111245778888
Q ss_pred CCcEEEEecCCCCC--------------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEEEeeCC
Q 016501 208 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 270 (388)
Q Consensus 208 kptvlIG~S~~~g~--------------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~--Grai~AtGs 270 (388)
+|++|=+.+.+.. +-+++++.|.++++.-+|+=.|||. -...+-+++.+. -.-+|++|+
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 151 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEEccc
Confidence 9999855544422 2345777888889999999999997 344555555431 123555543
No 79
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.57 E-value=0.095 Score=49.87 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=64.6
Q ss_pred HHHHHHHHH-HHhCCCeeeeeccCCCchHHHHHHHHcC--------CCcccccC-ccchHHHHHHHHHHH-HHHhCCCcc
Q 016501 59 LDEFMSAVK-QNYGEKVLIQFEDFANHNAFELLAKYGT--------THLVFNDD-IQGTASVVLAGVVAA-LKLIGGTLA 127 (388)
Q Consensus 59 vdefv~av~-~~fGp~~~I~~EDf~~~~af~iL~ryr~--------~~~~FnDD-iqGTa~V~lAgll~A-l~~~g~~L~ 127 (388)
+.++++.++ ..|++ +|.--=-...+++++|+..+ +-.++.|+ ..|.-.= ..|++.+ |+-.|.+++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~ 119 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLR 119 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCT
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCcc
Confidence 566666665 34644 55444334456666665432 11234443 4563322 4588888 888888999
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+++|+|||.+|.+++..|.. .|. ++|++++|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 9999999999998888887732 464 579888774
No 80
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.57 E-value=0.066 Score=51.95 Aligned_cols=126 Identities=13% Similarity=0.245 Sum_probs=74.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 208 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vk 208 (388)
.||.|+|||+.|..++-+|+.. |+ ...|+|+|.+-=-......+|.+.. +|.++..-..+-.+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999998887332 44 2689999984100000001222222 233221111245778888
Q ss_pred CcEEEEecCCCCC--------------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEEEeeCC
Q 016501 209 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 270 (388)
Q Consensus 209 ptvlIG~S~~~g~--------------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~--Grai~AtGs 270 (388)
+|++|=+.+.+.. +-+++++.|.++++.-+|+-.|||. -...+-+++.+. -+-+|++|+
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 147 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV---DILTYATWKFSGFPKERVIGSGT 147 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEeccc
Confidence 9999855444321 2345777888899999999999997 344555555431 123555543
No 81
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.54 E-value=0.034 Score=53.92 Aligned_cols=121 Identities=14% Similarity=0.067 Sum_probs=72.1
Q ss_pred ccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC--Cc---cccCCCCCccHhhhhhccccCCCCCHH
Q 016501 128 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GL---IVSSRKDSLQHFKKPWAHEHEPVNNLL 201 (388)
Q Consensus 128 d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~--Gl---v~~~r~~~l~~~k~~~a~~~~~~~~L~ 201 (388)
..||+|.|| |..|..++..|+. .|+-...-...++++|.+ .. +. ....+|.+.-.++..+-....++.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~-g~~~dl~~~~~~~~~~i~~~~~~~ 78 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQ-GVMMEIDDCAFPLLAGMTAHADPM 78 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHH-HHHHHHHTTTCTTEEEEEEESSHH
T ss_pred CCEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccch-hhHHHHhhhcccccCcEEEecCcH
Confidence 369999998 9999999887732 343100112479999975 10 00 000012211112222112235799
Q ss_pred HHhcccCCcEEEEecCCCCC--------------CCHHHHHHHhcCC-CCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 202 DAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g~--------------ft~evi~~Ma~~~-~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+++++ +|++|=+.+.+.. .++++++.+.+++ .+.+|+=.|||. -...+-+.+.
T Consensus 79 ~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv---~~~t~~~~~~ 146 (329)
T 1b8p_A 79 TAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA---NTNAYIAMKS 146 (329)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHT
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch---HHHHHHHHHH
Confidence 99998 9999855554421 3578899999996 887888889997 3344444443
No 82
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=93.48 E-value=0.13 Score=49.00 Aligned_cols=48 Identities=33% Similarity=0.428 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.|++.+++-.|.+++..|++++|||.|+.+++-.|. +.|. ++|++++|
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~-----~~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALA-----EAGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHH-----HhCC------CeEEEeCC
Confidence 456788888899999999999999999999987773 3464 68998887
No 83
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=93.39 E-value=0.037 Score=56.90 Aligned_cols=125 Identities=18% Similarity=0.277 Sum_probs=79.3
Q ss_pred ccEEEEeCcchH-HHHHHHHHHHHHHHh-cCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc-c-c-cC---CCCC
Q 016501 128 EHRFLFLGAGEA-GTGIAELIALEISKQ-TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H-E-HE---PVNN 199 (388)
Q Consensus 128 d~riv~~GAGsA-g~giA~ll~~~~~~~-~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a-~-~-~~---~~~~ 199 (388)
..||.|+|||+. +.++|..|+ .+ .++. ...++|+|.+- +|.+.+.+....+. . . .. ...+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~----~~~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D 95 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLL----DHLEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTD 95 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHH----HTTTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHH----hCCCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECC
Confidence 469999999996 555666663 22 2442 35799999853 22111222222221 1 1 11 1258
Q ss_pred HHHHhcccCCcEEEEecCCCCC----------------------------------CCHHHHHHHhcCCCCcEEEecCCC
Q 016501 200 LLDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 200 L~eav~~vkptvlIG~S~~~g~----------------------------------ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
+.+++++ +|++|=..++++. .=+++++.|.++|+.-+|+-.|||
T Consensus 96 ~~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNP 173 (472)
T 1u8x_X 96 PEEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNP 173 (472)
T ss_dssp HHHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSC
T ss_pred HHHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 9999998 9999865544211 235889999999999999999999
Q ss_pred CCCCCCCHHHHhcccCCcEEEeeC
Q 016501 246 TSQSECTAEEAYTWSKGRAIFASG 269 (388)
Q Consensus 246 t~~~E~tpe~A~~~t~Grai~AtG 269 (388)
. -+..+-+++.+...-+|++|
T Consensus 174 v---di~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 174 A---AIVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHHhCCCCCEEEeC
Confidence 8 34555566655443577664
No 84
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=93.28 E-value=0.11 Score=52.41 Aligned_cols=124 Identities=12% Similarity=0.165 Sum_probs=79.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHH-hcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc---CCCCCHHHHh
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 204 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~-~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~---~~~~~L~eav 204 (388)
.||.|+|||+. ++..|+..++. ..++. ...|+|+|.+- +|.+...+....+.+.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55554344444 24552 36799999853 22111111111111111 1125789999
Q ss_pred cccCCcEEEEecCCCC---------------CC-------------------CHHHHHHHhcCCCCcEEEecCCCCCCCC
Q 016501 205 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 250 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g---------------~f-------------------t~evi~~Ma~~~~rPIIFaLSNPt~~~E 250 (388)
++ +|++|=..++++ ++ =.++++.|.++| .-+++=.|||. -
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv---d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS---G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH---H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH---H
Confidence 98 999997776652 22 358999999999 99999999997 3
Q ss_pred CCHHHHhcccCCcEEEeeC
Q 016501 251 CTAEEAYTWSKGRAIFASG 269 (388)
Q Consensus 251 ~tpe~A~~~t~Grai~AtG 269 (388)
+-.+-+++.+.-.-+|++|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 4455666666443577765
No 85
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=93.18 E-value=0.79 Score=46.36 Aligned_cols=115 Identities=22% Similarity=0.266 Sum_probs=80.9
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCeeeeeccCCCchHHH---HHHHHc---CCC-c---ccccC----------ccchHH
Q 016501 50 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTAS 109 (388)
Q Consensus 50 ~~g~~y~~~vdefv~av~~~fGp~~~I~~EDf~~~~af~---iL~ryr---~~~-~---~FnDD----------iqGTa~ 109 (388)
.+.+|...+...|++.+.+.-||..-|-=+|++.. ..+ +.+.|. ... + ++--+ -.-||-
T Consensus 114 ~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~ 192 (419)
T 1gtm_A 114 LSDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATAR 192 (419)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhh
Confidence 34566777889999999998899988989999974 222 234442 221 2 33222 233666
Q ss_pred HHHHHHHHHHHHhCCC-ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCccc
Q 016501 110 VVLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIV 176 (388)
Q Consensus 110 V~lAgll~Al~~~g~~-L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~-l~D~~Glv~ 176 (388)
=+.-++-.+++-.|.+ |+..++.|.|.|..|..+|+++. . +.|+ +++ +.|+.|-++
T Consensus 193 Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~-~---~~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 193 GASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMS-E---DFGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHH-H---TTCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHH-H---hcCC-------EEEEEeCCCcccc
Confidence 6666778888889999 99999999999999999999883 3 0264 344 448877544
No 86
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.13 E-value=0.1 Score=44.25 Aligned_cols=102 Identities=12% Similarity=0.113 Sum_probs=53.6
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCcc-Hhhhhhcccc-CCCCCHH
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH-EPVNNLL 201 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~-~~k~~~a~~~-~~~~~L~ 201 (388)
+++...+|+|+|+|.-|..+|+.|.. .| .+++++|++- ++.+.+. .....+.... .+...|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 45667899999999999999998832 35 3689998752 1111111 1111111111 1111244
Q ss_pred HH-hcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC
Q 016501 202 DA-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 202 ea-v~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
++ ++. +|++|-+.... ..+..+++.+...+....|++.+|
T Consensus 79 ~~~~~~--ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGMEK--ADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGGG--CSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCccc--CCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 43 444 89999776532 233444443333345555555555
No 87
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.07 E-value=0.082 Score=49.25 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.1
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|++.||+|+|+|..|..+|+.|+.. |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 46778999999999999999999443 75 6899999974
No 88
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=93.00 E-value=0.087 Score=49.22 Aligned_cols=38 Identities=26% Similarity=0.380 Sum_probs=32.4
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|++.||+++|+|..|..+|+.|+. .|+ ++|.++|.+=
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~-----~Gv------g~i~lvD~d~ 62 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAG-----AGV------GTLVLADDDD 62 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHH-----TTC------SEEEEECCCB
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHH-----cCC------CeEEEEeCCC
Confidence 5678899999999999999999943 476 6899999873
No 89
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.89 E-value=0.3 Score=48.05 Aligned_cols=39 Identities=23% Similarity=0.461 Sum_probs=33.2
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
++|++.||+++|+|..|..+|..|+.+ |+ .+|.++|.+=
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCc
Confidence 457899999999999999999999543 75 7899999863
No 90
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.88 E-value=0.15 Score=49.15 Aligned_cols=104 Identities=16% Similarity=0.336 Sum_probs=61.9
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccC-CCCCHHHHhcccC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLLDAVKVIK 208 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~-~~~~L~eav~~vk 208 (388)
||.|+|||+.|.++|..|.. .|. ..+++++|++-=-...-..++.+.. ++..... ...+ .+++++
T Consensus 2 kI~VIGaG~~G~~la~~l~~-----~g~-----~~~V~l~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~d-~~~~~~-- 67 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLM-----KGF-----AREMVLIDVDKKRAEGDALDLIHGT-PFTRRANIYAGD-YADLKG-- 67 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----HTC-----CSEEEEECSSHHHHHHHHHHHHHHG-GGSCCCEEEECC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCeEEEEeCChHHHHHHHHHHHhhh-hhcCCcEEEeCC-HHHhCC--
Confidence 79999999999999998843 253 2479999985210000000111111 1111100 0124 456766
Q ss_pred CcEEEEecCCCCC--------------CCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 209 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 209 ptvlIG~S~~~g~--------------ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
+|++|=+-..+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 68 aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 8988844443321 12788999998888888888999984
No 91
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.81 E-value=0.1 Score=51.03 Aligned_cols=117 Identities=14% Similarity=0.239 Sum_probs=72.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 206 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~ 206 (388)
...||.|+|||..|..+|..|... |+ ...+.++|.+-=..+.-.-+|.+.. +|..+..-..+..+++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDAL-PFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhhh-hhcCCcEEEECcHHHhcC
Confidence 346999999999999999888432 54 2589999983110000001233221 232211111234677887
Q ss_pred cCCcEEEEecCCC--------CCC------CHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 207 IKPTILIGSSGVG--------RTF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 207 vkptvlIG~S~~~--------g~f------t~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+|++|=+.+.+ .+| -+++++.|.++++..+|+-.|||. .+..+-+++.
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv---di~t~~~~k~ 138 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKL 138 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch---HHHHHHHHHh
Confidence 99887554433 123 368889999999999999999997 3555555554
No 92
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=92.78 E-value=0.16 Score=49.22 Aligned_cols=104 Identities=21% Similarity=0.281 Sum_probs=65.8
Q ss_pred cEEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhh-hccccCCCCCHHHHhcc
Q 016501 129 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-WAHEHEPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~-~a~~~~~~~~L~eav~~ 206 (388)
.||+|.| +|..|..++..|. +.|+ ...++++|.+.- .....+|.+...+ -.+.-....++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~-----~~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMK-----MNPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHH-----HCTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 7999999988873 2353 256999996421 0000011110000 00000012368899998
Q ss_pred cCCcEEEEecCCCC--------------CCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 207 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 207 vkptvlIG~S~~~g--------------~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+|++|=+.+.+. -.++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 999986654442 24678888998889899999999997
No 93
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.75 E-value=0.12 Score=49.87 Aligned_cols=39 Identities=21% Similarity=0.292 Sum_probs=34.0
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
++|++.||+|+|+|..|..+|..|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 479999999999999999999999543 76 6999999873
No 94
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.61 E-value=0.21 Score=46.78 Aligned_cols=49 Identities=18% Similarity=0.279 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
-.|++.+|+-.|.+++..+++|+|+|.+|.+++..|.. .| .+++++|++
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56788888888889999999999999999999888832 35 468888874
No 95
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.57 E-value=0.046 Score=44.53 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=52.5
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHH-
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 203 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~ea- 203 (388)
++..+|+|+|+|..|..+++.|.. .| .+++++|++---. +.+......+.. +..+...|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~~~~----~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINEEKV----NAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCHHHH----HTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCHHHH----HHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 456789999999999999998832 35 3588888752110 111110001111 11111223333
Q ss_pred hcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 204 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
++ ++|++|=+.+..-..+..+++...+.+...||.-.+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 44 489998655421012233444444444556776666665
No 96
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.56 E-value=0.37 Score=45.34 Aligned_cols=94 Identities=13% Similarity=0.152 Sum_probs=58.2
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CCccccCCCCCccHhhhhhcc-------cc-CCCC-
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAH-------EH-EPVN- 198 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~--~Glv~~~r~~~l~~~k~~~a~-------~~-~~~~- 198 (388)
||.|+|+|..|..+|..|.. .| .+++++|+ +.- .+...++...+ .. ....
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~-----~g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVD-----NG-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHH-----HC-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHh-----CC-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 79999999999999999843 25 36888887 321 01111110000 00 1112
Q ss_pred -CHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 199 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 199 -~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
++.|+++. +|++| ++... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi-~~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVL-LGVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEE-ECSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEE-EcCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67788876 88887 33332 36788888886533466888888865
No 97
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.50 E-value=1.3 Score=42.71 Aligned_cols=139 Identities=12% Similarity=0.138 Sum_probs=86.8
Q ss_pred eeeccCCCchHHHHHHHH-cCCCcccccCc---cchHHHHHHHHHHHHHHh---------------------CCCccccE
Q 016501 76 IQFEDFANHNAFELLAKY-GTTHLVFNDDI---QGTASVVLAGVVAALKLI---------------------GGTLAEHR 130 (388)
Q Consensus 76 I~~EDf~~~~af~iL~ry-r~~~~~FnDDi---qGTa~V~lAgll~Al~~~---------------------g~~L~d~r 130 (388)
|+.-..+..|- .+ +.. +..|++.|--- +.+|=-+++.+|+..|-. |..|.+.|
T Consensus 80 I~~~~~G~d~i-d~-~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~ 157 (330)
T 2gcg_A 80 ISTMSVGIDHL-AL-DEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQST 157 (330)
T ss_dssp EEESSSCCTTB-CH-HHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCE
T ss_pred EEECCcccccc-cH-HHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCE
Confidence 55555554442 11 122 24677777643 334445788888887722 35689999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCc
Q 016501 131 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPT 210 (388)
Q Consensus 131 iv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkpt 210 (388)
|.|+|.|..|..+|+.+. ..|+ +++.+|+.. +.....+ .+ .-...+|.|+++. +|
T Consensus 158 vgIIG~G~iG~~iA~~l~-----~~G~-------~V~~~d~~~-------~~~~~~~-~~---g~~~~~l~e~l~~--aD 212 (330)
T 2gcg_A 158 VGIIGLGRIGQAIARRLK-----PFGV-------QRFLYTGRQ-------PRPEEAA-EF---QAEFVSTPELAAQ--SD 212 (330)
T ss_dssp EEEECCSHHHHHHHHHHG-----GGTC-------CEEEEESSS-------CCHHHHH-TT---TCEECCHHHHHHH--CS
T ss_pred EEEECcCHHHHHHHHHHH-----HCCC-------EEEEECCCC-------cchhHHH-hc---CceeCCHHHHHhh--CC
Confidence 999999999999999883 2363 588888641 1111111 11 0001279999987 99
Q ss_pred EEEEecC----CCCCCCHHHHHHHhcCCCCcEEEecCC
Q 016501 211 ILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 211 vlIG~S~----~~g~ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
+++=+-. ..++++++.++.|. +..++.-.|+
T Consensus 213 vVi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 213 FIVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 8874421 13678888888885 5667776665
No 98
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=92.46 E-value=1.1 Score=44.12 Aligned_cols=190 Identities=17% Similarity=0.149 Sum_probs=114.1
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHHh---------------------CCCccccEEEEeCcchHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 150 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~~---------------------g~~L~d~riv~~GAGsAg~giA~ll~~~ 150 (388)
..|++.|--- +.+|=-+++-+|+..|-. |..|.+.+|.|+|.|..|-.+|+.+ ..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l-~~ 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRA-RG 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHH-HT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHH-HH
Confidence 4577777542 235556888888887732 5679999999999999999999999 33
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHH
Q 016501 151 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 226 (388)
Q Consensus 151 ~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~ev 226 (388)
.|+ +|+.+|+... ...... ......+|.|+++. .|+++=.-- ..++|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~-------~~~~~~-----g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL-------SHALEE-----GAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC-------CHHHHT-----TCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc-------chhhhc-----CCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 364 6888887531 111110 11112589999987 999884422 127899999
Q ss_pred HHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-C--CceeeCCEEeccccccccccchHHHHHHHHh
Q 016501 227 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQANNAYIFPGFGLGLVIS 303 (388)
Q Consensus 227 i~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGsp-f--~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~ 303 (388)
++.|. +..|+.=.|+-..--|-.-.+|++ +|+. .+.|-. | +| . ....--+..|+++-|=++-.
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i-~gA~LDVf~~EP-~---~~~pL~~~~nvilTPHia~~---- 315 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEALR--SKHL-FAAGLDVFANEP-A---IDPRYRSLDNIFLTPHIGSA---- 315 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSE-EEEEESCCTTTT-S---CCTTGGGCTTEEECCSCTTC----
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCc-eEEEecCCCCCC-C---CCchHHhCCCEEEcCccCcC----
Confidence 99997 778888888744223333334443 3653 333311 1 11 0 01111345688888876421
Q ss_pred CCcccCHHHHHHHHHHHHcccC
Q 016501 304 GAIRVHDDMLLAASEALAKQVT 325 (388)
Q Consensus 304 ~a~~Itd~m~~aAA~aLA~~v~ 325 (388)
...-...|...+++.|.....
T Consensus 316 -t~e~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 316 -THETRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHHHHHHHc
Confidence 111224555556666655543
No 99
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.32 E-value=0.88 Score=43.80 Aligned_cols=122 Identities=15% Similarity=0.114 Sum_probs=83.9
Q ss_pred CCCcccccCcc---chHHHHHHHHHHHHHH----------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHHhc
Q 016501 95 TTHLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 155 (388)
Q Consensus 95 ~~~~~FnDDiq---GTa~V~lAgll~Al~~----------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~ 155 (388)
..|++.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+. . .
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~-~----~ 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIAN-A----M 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHH-H----T
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHH-H----C
Confidence 46777775432 3444588888888775 367899999999999999999999983 3 3
Q ss_pred CCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHHHHh
Q 016501 156 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 231 (388)
Q Consensus 156 G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~~Ma 231 (388)
|+ +++.+|+.. +. ...+ .+ .-...+|.|+++. .|+++=+-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~-------~~-~~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD-------IR-EKAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC-------CH-HHHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc-------ch-hHHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888641 11 0111 11 1112379999987 999885522 23678899999996
Q ss_pred cCCCCcEEEecCCC
Q 016501 232 SFNEKPLILALSNP 245 (388)
Q Consensus 232 ~~~~rPIIFaLSNP 245 (388)
+..++.=.|.-
T Consensus 224 ---~ga~lIn~arg 234 (313)
T 2ekl_A 224 ---DNVIIVNTSRA 234 (313)
T ss_dssp ---TTEEEEESSCG
T ss_pred ---CCCEEEECCCC
Confidence 67788888873
No 100
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.25 E-value=0.11 Score=50.21 Aligned_cols=121 Identities=22% Similarity=0.370 Sum_probs=72.9
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCC----CccHhhhhhccccC-CCCCHHHH
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHE-PVNNLLDA 203 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~----~l~~~k~~~a~~~~-~~~~L~ea 203 (388)
.||.|+|||+.|..+|-+|.. .|+ ...++++|.+ .+|.+ +|.+.. +|.++.. ..++ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 689999999999999888732 244 2589999985 22211 111111 1211110 0123 667
Q ss_pred hcccCCcEEEEecCCCCCC--------------CHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEEEe
Q 016501 204 VKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFA 267 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~f--------------t~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~--Grai~A 267 (388)
+++ +|++|=+.+.+.-- -+++++.|.++++.-+|+=.|||. -...+-+++.++ -.-+|+
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~~~~~~k~s~~p~~rviG 146 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV---DIITYMIQKWSGLPVGKVIG 146 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH---HHHHHHHHHHHTCCTTTEEE
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHcCCCHHHEec
Confidence 887 99998555443211 268899999999999999999996 445555555531 124566
Q ss_pred eCC
Q 016501 268 SGS 270 (388)
Q Consensus 268 tGs 270 (388)
+|+
T Consensus 147 ~gt 149 (318)
T 1y6j_A 147 SGT 149 (318)
T ss_dssp CTT
T ss_pred cCC
Confidence 654
No 101
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=92.25 E-value=0.064 Score=51.81 Aligned_cols=125 Identities=19% Similarity=0.312 Sum_probs=73.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 208 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vk 208 (388)
.||.|+|||+.|..++-+|+. .++ ...++|+|.+-=-.+....+|.+. .+|.++..-..+-.+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~~~a~~~-- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALAL-----LGV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGSYGDLEG-- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECCHHHhCC--
Confidence 389999999999998887732 243 258999998620000000112221 1222211100123777888
Q ss_pred CcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEEEeeC
Q 016501 209 PTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 269 (388)
Q Consensus 209 ptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~--Grai~AtG 269 (388)
+|++|=+.+.+ |- +-+++++.|.++++.-+|+-.|||. -...+-+++.++ -.-+|++|
T Consensus 68 aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~g 141 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV---DVMTQVAYALSGLPPGRVVGSG 141 (310)
T ss_dssp EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHTCCGGGEEECT
T ss_pred CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHHcCCCHHHEEecC
Confidence 99998544443 22 2356778888889999999999997 444455555431 12355554
No 102
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.23 E-value=0.17 Score=47.53 Aligned_cols=49 Identities=24% Similarity=0.356 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 112 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 112 lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
-.|++.+|+-.|.+++..+++|+|+|.+|.+++..|.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~-----~G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQ-----AQ-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHH-----TT-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 46788888888889999999999999999999888832 34 478888874
No 103
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.20 E-value=0.15 Score=46.89 Aligned_cols=100 Identities=14% Similarity=0.229 Sum_probs=62.6
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHH
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 203 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~ea 203 (388)
.++...||.|+|+|..|..+|..|.. .|. +.++++|++. +.+......+ .-....++.++
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~-----~g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYR-----KGF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHH-----HTC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHH-----CCC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 45666799999999999999998843 253 2477887631 1122221111 00112467787
Q ss_pred hcccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 204 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
++. +|++|=+. .... .+++++.+.... +..||.-+||-.+
T Consensus 66 ~~~--~Dvvi~av-~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~ 106 (266)
T 3d1l_A 66 NPY--AKLYIVSL-KDSA-FAELLQGIVEGKREEALMVHTAGSIP 106 (266)
T ss_dssp CSC--CSEEEECC-CHHH-HHHHHHHHHTTCCTTCEEEECCTTSC
T ss_pred hcC--CCEEEEec-CHHH-HHHHHHHHHhhcCCCcEEEECCCCCc
Confidence 775 89888433 3333 388888887654 5678888888553
No 104
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.19 E-value=0.14 Score=49.09 Aligned_cols=100 Identities=21% Similarity=0.326 Sum_probs=61.4
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCC----ccHhhhhhcccc--CCCCCHHHH
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHEH--EPVNNLLDA 203 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~----l~~~k~~~a~~~--~~~~~L~ea 203 (388)
||.|+|||+.|.++|..|.. .++ -.+++++|++- ++.+. +.+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAE-----KQL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 89999999999999998832 122 25799999862 11011 111100111110 11145655
Q ss_pred hcccCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 204 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 204 v~~vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+++ +|++|=+-+.+ |- +-+++.+.|.++++.-+|+-.|||.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 776 89888554332 21 1157788888888888988899997
No 105
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.19 E-value=0.15 Score=49.49 Aligned_cols=37 Identities=11% Similarity=-0.087 Sum_probs=26.3
Q ss_pred eccccccccccchHHHHHHHHhCCcccCHHHHHHHHH
Q 016501 282 FVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 318 (388)
Q Consensus 282 ~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA~ 318 (388)
..|||.-|-+.+|.+.=+..+...--++.+-+..+-+
T Consensus 189 ~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~ 225 (319)
T 2dpo_A 189 EIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMS 225 (319)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred CcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 3578888888888887777777666667666665554
No 106
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.15 E-value=0.2 Score=47.86 Aligned_cols=97 Identities=23% Similarity=0.343 Sum_probs=57.6
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh-hhcc----ccCCCCCHHH
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH----EHEPVNNLLD 202 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~-~~a~----~~~~~~~L~e 202 (388)
+.||.|+|+|+.|..+|..|.. .| .+++++|+..- +.+.+..... .|-. .-....++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~-----~G-------~~V~~~~r~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHE-----NG-------EEVILWARRKE----IVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSHH----HHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CeEEEEeCCHH----HHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 5799999999999999999843 35 46888887421 0011111100 0000 0011245666
Q ss_pred HhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 203 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 203 av~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
++. +|++| ++.. .-..+++++.++. +..+|..++|..+
T Consensus 78 -~~~--aDvVi-l~vk-~~~~~~v~~~l~~--~~~~vv~~~nGi~ 115 (335)
T 1z82_A 78 -IKK--EDILV-IAIP-VQYIREHLLRLPV--KPSMVLNLSKGIE 115 (335)
T ss_dssp -CCT--TEEEE-ECSC-GGGHHHHHTTCSS--CCSEEEECCCCCC
T ss_pred -hcC--CCEEE-EECC-HHHHHHHHHHhCc--CCCEEEEEeCCCC
Confidence 665 78766 3333 2567778777654 5668888999764
No 107
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.12 E-value=0.16 Score=50.12 Aligned_cols=96 Identities=19% Similarity=0.303 Sum_probs=63.4
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc----cCCCCCH
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 200 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~----~~~~~~L 200 (388)
.+...+++|+|+|..|..+|+.+ .. .|+ +++.+|++. +.+...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a-~~----~Ga-------~V~~~d~~~-------~~l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIA-NG----MGA-------TVTVLDINI-------DKLRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHH-HH----TTC-------EEEEEESCH-------HHHHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-Hh----CCC-------EEEEEeCCH-------HHHHHHHHhcCCeeEeccCCHHHH
Confidence 47889999999999999999988 32 362 688888741 1122222212110 0112358
Q ss_pred HHHhcccCCcEEEEecCCC-----CCCCHHHHHHHhcCCCCcEEEecCC
Q 016501 201 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~-----g~ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
.+.++. .|++|.+...+ .+++++.++.|. +.-+|.=+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 888876 99999876544 357899999886 4566766663
No 108
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.10 E-value=0.11 Score=51.48 Aligned_cols=38 Identities=26% Similarity=0.435 Sum_probs=33.1
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|++.||+++|||..|..+|+.|+. .|+ ++|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~-----aGV------g~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIA-----WGV------RKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEecCCE
Confidence 5789999999999999999999944 376 7999999974
No 109
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.05 E-value=0.77 Score=41.72 Aligned_cols=92 Identities=11% Similarity=0.209 Sum_probs=61.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
..||.|+|+|..|..+|..|.. .|.. ...+++++|++- + . + .-....++.++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~-----~g~~---~~~~v~~~~~~~----~---~-------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIAN-----ANII---KKENLFYYGPSK----K---N-------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-----HTSS---CGGGEEEECSSC----C---S-------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHH-----CCCC---CCCeEEEEeCCc----c---c-------C--ceEEeCCHHHHHhc-
Confidence 4589999999999999999843 2421 014688888741 1 1 0 00112467888876
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 208 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 208 kptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
+|++| ++.. .-..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~-~~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVK-PDIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSC-TTTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeC-HHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 88877 4433 3467888888876666678888888875
No 110
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.01 E-value=0.098 Score=50.26 Aligned_cols=100 Identities=21% Similarity=0.293 Sum_probs=62.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCC----CCccHhhhhhcccc--CCCCCHHH
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK----DSLQHFKKPWAHEH--EPVNNLLD 202 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~----~~l~~~k~~~a~~~--~~~~~L~e 202 (388)
.||.|+|||..|.++|..|.. .|+ . +++++|.+- ++. .+|.+...+..... ....++ +
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~----~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~ 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVE----GVPQGKALDLYEASPIEGFDVRVTGTNNY-A 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSS----SHHHHHHHHHHTTHHHHTCCCCEEEESCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCc----cHHHHHHHhHHHhHhhcCCCeEEEECCCH-H
Confidence 589999999999999998832 353 1 399999751 110 11221111111110 111466 7
Q ss_pred HhcccCCcEEEEecCCCCC--------------CCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 203 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 203 av~~vkptvlIG~S~~~g~--------------ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
++++ +|++|=+-+.+.. .-+++.+.+.+++++-+|+--|||.
T Consensus 67 a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 67 DTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp GGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 8888 9999855444321 2257888888899888888889997
No 111
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=91.99 E-value=0.15 Score=42.93 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=25.6
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.|+|+|||.||+..|..|. +.|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La-----~~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALT-----AAGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHH-----HTTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHH-----HCCC-------CEEEEECC
Confidence 5999999999999999993 3475 58888864
No 112
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=91.85 E-value=0.13 Score=49.60 Aligned_cols=108 Identities=17% Similarity=0.361 Sum_probs=67.2
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCC----CCccHhhhhhcccc--CCCCCHHHH
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK----DSLQHFKKPWAHEH--EPVNNLLDA 203 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~----~~l~~~k~~~a~~~--~~~~~L~ea 203 (388)
||.|+|||+.|.++|-+++. .|+ ..++|+|.+ .++. .+|.+...++.... ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-----~~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-----RGY------DDLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHh-----CCC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HH
Confidence 68999999999999987742 254 379999986 2220 11222111111111 111455 78
Q ss_pred hcccCCcEEEEecCCCCC--------------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 016501 204 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 258 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~--------------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~ 258 (388)
+++ +|++|=..+.+.. .-+++++.|.++++.-+|+=.|||. -...+-+++
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k 128 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV---DAMTYVMYK 128 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHHH
Confidence 888 9999866544421 2468888888889998777789997 333444444
No 113
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.84 E-value=0.25 Score=48.56 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=71.0
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 192 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~ 192 (388)
++.+++.++.. ....++.|+|+|..|..+++.+... .+ .++|+++|++ . +......+.|..
T Consensus 116 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~a~al~~~----~~------~~~V~V~~r~----~---~~a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALAR--PNARKMALIGNGAQSEFQALAFHKH----LG------IEEIVAYDTD----P---LATAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSTTHHHHHHHHHHH----SC------CCEEEEECSS----H---HHHHHHHHHHTT
T ss_pred HHHHHHHHhcc--ccCCeEEEECCcHHHHHHHHHHHHh----CC------CcEEEEEcCC----H---HHHHHHHHHHHh
Confidence 45666665532 4678999999999999998777321 23 2678888873 1 122333333321
Q ss_pred c-c---CCCCCHHHHhcccCCcEEEEecCCC---CCCCHHHHHHHhcCCCCcEEEecCC--CCCCCCCCHHHH
Q 016501 193 E-H---EPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 256 (388)
Q Consensus 193 ~-~---~~~~~L~eav~~vkptvlIG~S~~~---g~ft~evi~~Ma~~~~rPIIFaLSN--Pt~~~E~tpe~A 256 (388)
. . ....++.|+++. +|++|=++..+ .+|+.++++ +.-.|+.++. |. +-|+.++-.
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~~~ 240 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHADVL 240 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHHHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHHHH
Confidence 1 1 124689999987 99999766543 134444332 4447777775 55 578876543
No 114
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=91.79 E-value=0.84 Score=43.81 Aligned_cols=122 Identities=15% Similarity=0.166 Sum_probs=82.6
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 153 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~ 153 (388)
..|++.|--- +.+|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+. .
T Consensus 88 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~-~--- 163 (307)
T 1wwk_A 88 KGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIAN-A--- 163 (307)
T ss_dssp HTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHH-H---
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHH-H---
Confidence 3577777433 23444578888888772 346799999999999999999999983 3
Q ss_pred hcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHHH
Q 016501 154 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 229 (388)
Q Consensus 154 ~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~~ 229 (388)
.|+ +++.+|+.. +. ...+ .+ .-...+|.|+++. .|+++=+-- ..++++++.++.
T Consensus 164 -~G~-------~V~~~d~~~-------~~-~~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~ 221 (307)
T 1wwk_A 164 -LGM-------NILLYDPYP-------NE-ERAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKL 221 (307)
T ss_dssp -TTC-------EEEEECSSC-------CH-HHHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHH
T ss_pred -CCC-------EEEEECCCC-------Ch-hhHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhc
Confidence 364 688888741 11 1111 11 1112379999987 999885421 236789999999
Q ss_pred HhcCCCCcEEEecCCC
Q 016501 230 MASFNEKPLILALSNP 245 (388)
Q Consensus 230 Ma~~~~rPIIFaLSNP 245 (388)
|. +.-++.=.|.-
T Consensus 222 mk---~ga~lin~arg 234 (307)
T 1wwk_A 222 MK---KTAILINTSRG 234 (307)
T ss_dssp SC---TTCEEEECSCG
T ss_pred CC---CCeEEEECCCC
Confidence 97 67788888773
No 115
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.62 E-value=0.13 Score=48.63 Aligned_cols=103 Identities=14% Similarity=0.275 Sum_probs=61.8
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCcc-Hhhhhhcccc--CCCCCHHHHh
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAV 204 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~-~~k~~~a~~~--~~~~~L~eav 204 (388)
..||.|+|||+.|..+|..|.. .|. ..+++++|++---... ..+. .+..++..+. ....+ .+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~-----~g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~-~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ-----RGI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDD-PEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESC-GGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCC-HHHh
Confidence 4689999999999999988832 353 1479999986310000 0011 0111121110 00113 3566
Q ss_pred cccCCcEEEEecCCCCCCCH----------------HHHHHHhcCCCCcEEEecCCCCC
Q 016501 205 KVIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g~ft~----------------evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
+. +|++|=+...+. ++ ++++.|.++++..+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 65 898884443321 23 88999988888889999999973
No 116
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=91.62 E-value=2.1 Score=42.07 Aligned_cols=170 Identities=16% Similarity=0.104 Sum_probs=103.0
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH--------------------hCCCccccEEEEeCcchHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 151 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~--------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~ 151 (388)
..|++.|=-- +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+ ..
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l-~~- 185 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRL-KP- 185 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHH-GG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHH-HH-
Confidence 4566665322 23455578888888762 25679999999999999999999998 33
Q ss_pred HHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHH
Q 016501 152 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 227 (388)
Q Consensus 152 ~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi 227 (388)
.|+ +++.+|+... .....+..-+ ....+|.|+++. .|+++=.- ...++|+++.+
T Consensus 186 ---~G~-------~V~~~dr~~~-------~~~~~~~~g~---~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 186 ---FGC-------NLLYHDRLQM-------APELEKETGA---KFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ---GCC-------EEEEECSSCC-------CHHHHHHHCC---EECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEeCCCcc-------CHHHHHhCCC---eEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 364 5888887521 1111111001 113589999998 99998431 12268999999
Q ss_pred HHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCC--ceeeCCEEecc-ccccccccchHHH
Q 016501 228 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--PFEYNGKVFVP-GQANNAYIFPGFG 297 (388)
Q Consensus 228 ~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~--pv~~~Gr~~~p-~Q~NN~~iFPGlg 297 (388)
+.|. +..++.=.|+-..--|-.-.+|++ .|+.--|.--=|+ |.. .+.| -+..|+++-|=++
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~----~~~pL~~~~nvilTPHia 307 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAP----KDHPWRYMPNQAMTPHTS 307 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCC----TTCGGGTSTTBCCCCSCG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCC----CCChhhcCCCEEECCcCC
Confidence 9997 778998888854223333334543 3654333221121 110 0111 2456788888664
No 117
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=91.62 E-value=0.12 Score=50.18 Aligned_cols=114 Identities=20% Similarity=0.278 Sum_probs=69.6
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCC--CCHHHHhccc
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 207 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~--~~L~eav~~v 207 (388)
||.|+|||..|.++|..|... |+ ...+.++|.+-=..+....+|.+.. .+....... .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRESS-PIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHHH-HHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhccc-cccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988432 54 2589999985311110001222221 121111111 245788888
Q ss_pred CCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 208 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 208 kptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+|++|=+.+.+ |- +-+++.+.+.++++..+|+-.|||. .....-+++.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~ 131 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL---DVMTYVAYEA 131 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH---HHHHHHHHHH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch---hHHHHHHHHh
Confidence 99887444433 21 2357778888999999999999997 4444445443
No 118
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.58 E-value=1.3 Score=43.09 Aligned_cols=119 Identities=16% Similarity=0.233 Sum_probs=80.7
Q ss_pred CCcccccCcc---chHHHHHHHHHHHHHH-------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHH
Q 016501 96 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 153 (388)
Q Consensus 96 ~~~~FnDDiq---GTa~V~lAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~ 153 (388)
.|++.|=--- .+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+. .
T Consensus 110 gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~-~--- 185 (333)
T 3ba1_A 110 GVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAE-A--- 185 (333)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHH-T---
T ss_pred CcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHH-H---
Confidence 4566664332 3444578888887653 246789999999999999999999983 2
Q ss_pred hcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHHH
Q 016501 154 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 229 (388)
Q Consensus 154 ~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~~ 229 (388)
.|+ +++.+|+.. .. .. .+ ....+|.|+++. +|+++=.-- ..++++++.++.
T Consensus 186 -~G~-------~V~~~dr~~----~~---~~----g~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~ 240 (333)
T 3ba1_A 186 -FDC-------PISYFSRSK----KP---NT----NY----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDA 240 (333)
T ss_dssp -TTC-------CEEEECSSC----CT---TC----CS----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHH
T ss_pred -CCC-------EEEEECCCc----hh---cc----Cc----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhc
Confidence 364 588888752 11 11 01 112479999987 998884421 236788999999
Q ss_pred HhcCCCCcEEEecCCCC
Q 016501 230 MASFNEKPLILALSNPT 246 (388)
Q Consensus 230 Ma~~~~rPIIFaLSNPt 246 (388)
|. +..+|.-.|.-.
T Consensus 241 mk---~gailIn~srG~ 254 (333)
T 3ba1_A 241 LG---PKGVLINIGRGP 254 (333)
T ss_dssp HC---TTCEEEECSCGG
T ss_pred CC---CCCEEEECCCCc
Confidence 96 567887777654
No 119
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=91.50 E-value=0.55 Score=45.79 Aligned_cols=188 Identities=15% Similarity=0.230 Sum_probs=114.2
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 153 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~ 153 (388)
..|++.|--- +.+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+ ..
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l-~~--- 158 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKA-SA--- 158 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHH-HH---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHH-Hh---
Confidence 5788888653 23444577888877652 26679999999999999999999998 33
Q ss_pred hcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHHHH
Q 016501 154 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 229 (388)
Q Consensus 154 ~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi~~ 229 (388)
.|+ +++.+|+..- ..+.+. .. ....+|.|+++. .|+++=+- ...++|+++.+..
T Consensus 159 -~G~-------~V~~~dr~~~----~~~~~~---~~-----~~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 159 -LGM-------HVIGVNTTGH----PADHFH---ET-----VAFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp -TTC-------EEEEEESSCC----CCTTCS---EE-----EEGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred -CCC-------EEEEECCCcc----hhHhHh---hc-----cccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 364 6888887531 101111 11 113478999988 99988431 1237899999999
Q ss_pred HhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----eCCCCCceeeCCEEeccccccccccchHHHHHHHHhC
Q 016501 230 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISG 304 (388)
Q Consensus 230 Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~A-----tGspf~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~ 304 (388)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++ + ..--+..|+++-|=++- .
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~--~pL~~~~nvilTPHia~-----~ 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----D--HPLWQRDDVLITPHISG-----Q 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----T--CGGGGCSSEEECCSCTT-----C
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----C--ChhhcCCCEEEcCcccc-----C
Confidence 96 678888888744223333334443 3543222 1111111 0 01124568888887641 2
Q ss_pred CcccCHHHHHHHHHHHHccc
Q 016501 305 AIRVHDDMLLAASEALAKQV 324 (388)
Q Consensus 305 a~~Itd~m~~aAA~aLA~~v 324 (388)
...-.+.|...+++-|....
T Consensus 281 t~~~~~~~~~~~~~nl~~~l 300 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFV 300 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 22234566666666666654
No 120
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.44 E-value=0.31 Score=46.45 Aligned_cols=102 Identities=13% Similarity=0.124 Sum_probs=60.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCC--ccH-hhhhhcc-ccCCCCCHHHHh
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS--LQH-FKKPWAH-EHEPVNNLLDAV 204 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~--l~~-~k~~~a~-~~~~~~~L~eav 204 (388)
.||.|+|+|+-|..+|..|.. .| .+++++|+.-. ..=+... ++. ....+-- +.....++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~-----~g-------~~V~~~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK-----TG-------HCVSVVSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH-----TT-------CEEEEECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CC-------CeEEEEeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 589999999999999998832 35 47888887531 0000000 000 0000000 001124566655
Q ss_pred cccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 205 KVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
+. +|++| ++... -.++++++.++.+. +..+|+.+.|-..
T Consensus 70 ~~--~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 70 TK--PDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp SC--CSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred CC--CCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 44 88887 55543 34668999998654 4568888999864
No 121
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=91.37 E-value=0.89 Score=42.52 Aligned_cols=119 Identities=18% Similarity=0.148 Sum_probs=73.0
Q ss_pred eeccCCCchHHHHHHHHcC------CCcccccCccchHHHHHHHHHHHHHHh-CCCccccEEEEeC-cchHHHHHHHHHH
Q 016501 77 QFEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIA 148 (388)
Q Consensus 77 ~~EDf~~~~af~iL~ryr~------~~~~FnDDiqGTa~V~lAgll~Al~~~-g~~L~d~riv~~G-AGsAg~giA~ll~ 148 (388)
.++-..-..+.+++++.+. +..+| .|..|.- ..-.|++.+++-. +.+++..+++|.| +|.+|.+++..|.
T Consensus 63 ~~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~ 140 (287)
T 1lu9_A 63 FVGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLA 140 (287)
T ss_dssp EEECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHH
T ss_pred EEccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 3454555577777777652 23344 3455532 3456777888776 7889999999999 9999999998884
Q ss_pred HHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc---------ccCCCCCHHHHhcccCCcEEEEecCC
Q 016501 149 LEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---------EHEPVNNLLDAVKVIKPTILIGSSGV 218 (388)
Q Consensus 149 ~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~---------~~~~~~~L~eav~~vkptvlIG~S~~ 218 (388)
. .|. +++++|++- ++ .....+.+.. +-.+..++.++++. .|++|=+++.
T Consensus 141 ~-----~G~-------~V~i~~R~~----~~---~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~DvlVn~ag~ 198 (287)
T 1lu9_A 141 G-----EGA-------EVVLCGRKL----DK---AQAAADSVNKRFKVNVTAAETADDASRAEAVKG--AHFVFTAGAI 198 (287)
T ss_dssp H-----TTC-------EEEEEESSH----HH---HHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT--CSEEEECCCT
T ss_pred H-----CcC-------EEEEEECCH----HH---HHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh--CCEEEECCCc
Confidence 2 352 488888741 11 1211111111 11111346677776 7999977764
No 122
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.27 E-value=0.34 Score=43.70 Aligned_cols=93 Identities=13% Similarity=0.191 Sum_probs=58.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l-~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
.||.|+|+|..|..+|..|.. .|. ++++ +|++ .+.+....+.+-. ....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~-----~g~-------~V~~v~~r~-------~~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTA-----AQI-------PAIIANSRG-------PASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHH-----TTC-------CEEEECTTC-------GGGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCC-------HHHHHHHHHHhCC--CcccChHHHHhc-
Confidence 589999999999999998832 353 4555 5553 1223332222211 112345666776
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 208 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 208 kptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
+|++| ++.. ....+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lavp-~~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVP-YDSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESC-GGGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCC-hHHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 89887 3332 3466778877765 45669999999973
No 123
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.24 E-value=0.17 Score=49.41 Aligned_cols=116 Identities=16% Similarity=0.293 Sum_probs=70.3
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCC---CCCHHH
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLD 202 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~---~~~L~e 202 (388)
++..||.|+|||..|.++|.+|.. .|+ + ++.++|.+-=..+.-..+|.+.. .|...... ..+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEEEEeCCH-H
Confidence 456799999999999999988843 355 1 69999985211000001222221 12211111 1344 8
Q ss_pred HhcccCCcEEEEecCCC---CC-----C------CHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 203 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 203 av~~vkptvlIG~S~~~---g~-----f------t~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
++++ +|++|=+.+.+ |- | -+++++.|.++++.-+|+-.|||. .+...-+++.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv---d~~t~~~~k~ 137 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL---DAMVWALQKF 137 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc---HHHHHHHHHh
Confidence 8988 99887554432 22 1 257778888999999999999997 3444445444
No 124
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.17 E-value=0.064 Score=52.77 Aligned_cols=125 Identities=14% Similarity=0.152 Sum_probs=77.1
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc--CCCCCHHHHh
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAV 204 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~--~~~~~L~eav 204 (388)
...||.|+|||..|.++|..++. .|+ ...+.++|.+-=..+....+|.+. ..|.... ....++.+ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~-----~g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLM-----KDL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHH-----HCC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-h
Confidence 34799999999999999998843 255 247999997311000000123332 2333211 11235554 7
Q ss_pred cccCCcEEEEecCCC---C-----C------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCC---cEEEe
Q 016501 205 KVIKPTILIGSSGVG---R-----T------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG---RAIFA 267 (388)
Q Consensus 205 ~~vkptvlIG~S~~~---g-----~------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~G---rai~A 267 (388)
++ +|++|=+.+.+ | + +-+++++.+.++++.-+|+-.|||. .+..+-+++.+ | +-+|+
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~~k~s-g~p~~rViG 161 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQDWKLS-GLPMHRIIG 161 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH-CCCGGGEEC
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHHHHHh-CCCHHHeec
Confidence 77 99988333332 2 1 2356778889999999999999996 55666666655 3 34566
Q ss_pred eC
Q 016501 268 SG 269 (388)
Q Consensus 268 tG 269 (388)
+|
T Consensus 162 ~g 163 (330)
T 3ldh_A 162 SG 163 (330)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 125
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=91.13 E-value=0.61 Score=47.66 Aligned_cols=101 Identities=11% Similarity=0.164 Sum_probs=63.5
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHh
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 204 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav 204 (388)
++..||.|+|+|..|.++|..|. +.|. +++++|+.- +........+.. .-....|+.|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La-----~~G~-------~V~v~~r~~-------~~~~~l~~~~~~~gi~~~~s~~e~v 73 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIE-----SRGY-------TVSIFNRSR-------EKTEEVIAENPGKKLVPYYTVKEFV 73 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHH-----TTTC-------CEEEECSSH-------HHHHHHHHHSTTSCEEECSSHHHHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHH-----hCCC-------eEEEEeCCH-------HHHHHHHhhCCCCCeEEeCCHHHHH
Confidence 56778999999999999999993 2363 577777631 112222111100 001235788888
Q ss_pred ccc-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 205 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 205 ~~v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
+.. ++|++| ++...+...+++++.+.... +.-||.-+||-.
T Consensus 74 ~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 74 ESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 753 478777 55444567888888887654 356888899865
No 126
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.08 E-value=0.6 Score=45.82 Aligned_cols=100 Identities=22% Similarity=0.173 Sum_probs=60.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhh--hhhccc---c---CCCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWAHE---H---EPVNN 199 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k--~~~a~~---~---~~~~~ 199 (388)
..||.|+|+|+-|.++|..|.. .| .+++++|++--.. +.++... ..|-.. . ....+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~-----~G-------~~V~l~~r~~~~~----~~i~~~~~~~~~l~g~~l~~~i~~t~d 92 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR-----KG-------QKVRLWSYESDHV----DEMQAEGVNNRYLPNYPFPETLKAYCD 92 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT-----TT-------CCEEEECSCHHHH----HHHHHHSSBTTTBTTCCCCTTEEEESC
T ss_pred CCeEEEECccHHHHHHHHHHHH-----CC-------CeEEEEeCCHHHH----HHHHHcCCCcccCCCCccCCCeEEECC
Confidence 4689999999999999999832 35 3688888741100 0111100 001000 0 11257
Q ss_pred HHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 200 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 200 L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
+.|+++. +|++| ++.. --+.+++++.+..+. +..+|..++|-..
T Consensus 93 ~~ea~~~--aDvVi-laVp-~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 93 LKASLEG--VTDIL-IVVP-SFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHHHTT--CCEEE-ECCC-HHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHHHhc--CCEEE-ECCC-HHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 8888877 88777 4432 236778888887654 4567888888653
No 127
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.06 E-value=0.54 Score=42.91 Aligned_cols=98 Identities=15% Similarity=0.229 Sum_probs=60.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 208 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vk 208 (388)
.||.|+|+|..|..+|+.|.. .|.. ..++++++|++ . +.+...++.+ .-....++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~-----~g~~---~~~~V~~~~r~------~-~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN-----KNIV---SSNQIICSDLN------T-ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTSS---CGGGEEEECSC------H-HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHh-----CCCC---CCCeEEEEeCC------H-HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 589999999999999999843 3531 12478888873 1 1222222211 11224678999987
Q ss_pred CcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 209 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 209 ptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
+|++| ++. +.-..+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav-~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSI-KPDLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECS-CTTTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEe-CHHHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 89888 444 3356778888877544 4568887777764
No 128
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=91.04 E-value=1.4 Score=43.79 Aligned_cols=179 Identities=14% Similarity=0.085 Sum_probs=104.5
Q ss_pred chHHHHHHHHHHHHHH---------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 016501 106 GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 164 (388)
Q Consensus 106 GTa~V~lAgll~Al~~---------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~ 164 (388)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+ .. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l-~~----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVL-SG----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHH-TT----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhh-hh----CCC-------
Confidence 3455678888887772 13468899999999999999999988 32 364
Q ss_pred cEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEe----cCCCCCCCHHHHHHHhcCCCCcEEE
Q 016501 165 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLIL 240 (388)
Q Consensus 165 ~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~----S~~~g~ft~evi~~Ma~~~~rPIIF 240 (388)
+++.+|+.. ........-+ ...+|.|+++. .|+++=. ....++++++.++.|. +..|+.
T Consensus 201 ~V~~~d~~~--------~~~~~~~~g~----~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailI 263 (365)
T 4hy3_A 201 RIRVFDPWL--------PRSMLEENGV----EPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFI 263 (365)
T ss_dssp EEEEECSSS--------CHHHHHHTTC----EECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEE
T ss_pred EEEEECCCC--------CHHHHhhcCe----eeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEE
Confidence 688777641 1111111111 13579999988 9999843 2223689999999997 778988
Q ss_pred ecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-C--CceeeCCEEeccccccccccchHHHHHHHHhCCcccCHHHHHHHH
Q 016501 241 ALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAAS 317 (388)
Q Consensus 241 aLSNPt~~~E~tpe~A~~~t~Grai~AtGsp-f--~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA 317 (388)
=.|.-..--|-.-.+|++ .|+.- | |.. | +|..-+ ..--+..|+++-|=++-. ...-...|...++
T Consensus 264 N~aRG~~vde~aL~~aL~--~g~i~-a-aLDV~~~EPl~~~---~pL~~~~nvilTPHia~~-----t~e~~~~~~~~~~ 331 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAVS--SGHIV-A-ASDVYPEEPLPLD---HPVRSLKGFIRSAHRAGA-----LDSAFKKMGDMVL 331 (365)
T ss_dssp ECSCGGGSCHHHHHHHHH--TTSSE-E-EESCCSSSSCCTT---CGGGTCTTEEECCSCSSC-----CHHHHHHHHHHHH
T ss_pred ECcCCchhCHHHHHHHHH--cCCce-E-EeeCCCCCCCCCC---ChhhcCCCEEECCccccC-----HHHHHHHHHHHHH
Confidence 888744223333334443 46543 3 311 1 111000 011245688888877421 1222345555566
Q ss_pred HHHHcccC
Q 016501 318 EALAKQVT 325 (388)
Q Consensus 318 ~aLA~~v~ 325 (388)
+.|.....
T Consensus 332 ~ni~~~~~ 339 (365)
T 4hy3_A 332 EDMDLMDR 339 (365)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 66655543
No 129
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=90.95 E-value=1.8 Score=42.72 Aligned_cols=146 Identities=14% Similarity=0.188 Sum_probs=94.4
Q ss_pred eeeeccCCCchH-HHHHHHHcCCCcccccCc---cchHHHHHHHHHHHHHH--------------------hCCCccccE
Q 016501 75 LIQFEDFANHNA-FELLAKYGTTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHR 130 (388)
Q Consensus 75 ~I~~EDf~~~~a-f~iL~ryr~~~~~FnDDi---qGTa~V~lAgll~Al~~--------------------~g~~L~d~r 130 (388)
+|+.-..+..|- .+-+.+.+..|.+.|--- +.+|=-+++.+|+..|- .+..|.+.+
T Consensus 87 ~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~t 166 (364)
T 2j6i_A 87 LVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKT 166 (364)
T ss_dssp EEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCE
T ss_pred EEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCE
Confidence 377666666663 233444333677776422 33455578888888762 367899999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCc
Q 016501 131 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPT 210 (388)
Q Consensus 131 iv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkpt 210 (388)
|.|+|.|..|..+|+.+ .. .|+ ++++.+|+... .....+..=++ ...+|.|+++. .|
T Consensus 167 vgIIG~G~IG~~vA~~l-~~----~G~------~~V~~~d~~~~-------~~~~~~~~g~~---~~~~l~ell~~--aD 223 (364)
T 2j6i_A 167 IATIGAGRIGYRVLERL-VP----FNP------KELLYYDYQAL-------PKDAEEKVGAR---RVENIEELVAQ--AD 223 (364)
T ss_dssp EEEECCSHHHHHHHHHH-GG----GCC------SEEEEECSSCC-------CHHHHHHTTEE---ECSSHHHHHHT--CS
T ss_pred EEEECcCHHHHHHHHHH-Hh----CCC------cEEEEECCCcc-------chhHHHhcCcE---ecCCHHHHHhc--CC
Confidence 99999999999999998 22 363 23888886421 11111110011 12479999987 99
Q ss_pred EEEEecCC----CCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 211 ILIGSSGV----GRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 211 vlIG~S~~----~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+++=+--. .++++++.++.|. +.-++.-.|+-.
T Consensus 224 vV~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG~ 260 (364)
T 2j6i_A 224 IVTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARGA 260 (364)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCGG
T ss_pred EEEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCCc
Confidence 99854321 1688999998886 677888888743
No 130
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=90.92 E-value=1.8 Score=41.71 Aligned_cols=118 Identities=18% Similarity=0.188 Sum_probs=82.6
Q ss_pred CCCcccccCcc---chHHHHHHHHHHHHHHh---------------------CCCccccEEEEeCcchHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDIQ---GTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 150 (388)
Q Consensus 95 ~~~~~FnDDiq---GTa~V~lAgll~Al~~~---------------------g~~L~d~riv~~GAGsAg~giA~ll~~~ 150 (388)
..|.+.|=--- .+|=-+++.+|+..|-. |..|.+.+|.|+|.|..|..+|+.+. .
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~-~ 165 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRAL-A 165 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHH-H
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHH-H
Confidence 45777775332 34445788888876632 45789999999999999999999983 3
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHH
Q 016501 151 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 226 (388)
Q Consensus 151 ~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~ev 226 (388)
.|+ +++.+|+.. +. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 166 ----~G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 166 ----FGM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp ----TTC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred ----CCC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 364 688888742 11 11 1 13579999987 99988652 1236788888
Q ss_pred HHHHhcCCCCcEEEecCCCC
Q 016501 227 IEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 227 i~~Ma~~~~rPIIFaLSNPt 246 (388)
++.|. +..++.=.|.-.
T Consensus 216 l~~mk---~ga~lin~srg~ 232 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARGA 232 (311)
T ss_dssp HTTSC---TTCEEEECSCGG
T ss_pred HhhCC---CCcEEEECCCCC
Confidence 88875 678998888843
No 131
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=90.86 E-value=0.93 Score=43.34 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=64.7
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 192 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~ 192 (388)
++.+++..+. +....+|.|+|+|..|..+++.|... .|. ++++++|+. . +......+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~---~~~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----K---ENAEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----H---HHHHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----H---HHHHHHHHHhhC
Confidence 3455554442 44678999999999999999888331 243 578888763 1 112222222210
Q ss_pred ccCCCCCHHHHhcccCCcEEEEecCC-CCCCCHHHHHHHhcCCCCcEEEecCC--CCCCCCCCH
Q 016501 193 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTA 253 (388)
Q Consensus 193 ~~~~~~~L~eav~~vkptvlIG~S~~-~g~ft~evi~~Ma~~~~rPIIFaLSN--Pt~~~E~tp 253 (388)
+-....++.|+++. +|++|=+... ..+|.+++ ..+.-+|+.+|. |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~~------l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGEW------VKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGGG------SCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHHH------cCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999987 9998855332 12333321 225568888753 54 356654
No 132
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=90.84 E-value=2.8 Score=40.62 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=79.0
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH--------------------hC----CCccccEEEEeCcchHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IG----GTLAEHRFLFLGAGEAGTGIAELI 147 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~--------------------~g----~~L~d~riv~~GAGsAg~giA~ll 147 (388)
..|.+.|=-- +.+|=-+++.+|+..|- .| ..|.+.+|.|+|.|..|..+|+.+
T Consensus 86 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l 165 (333)
T 2d0i_A 86 RGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRL 165 (333)
T ss_dssp TTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHH
T ss_pred CCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHH
Confidence 4566766432 33455578888887663 24 689999999999999999999988
Q ss_pred HHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCC----CCCCC
Q 016501 148 ALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGV----GRTFT 223 (388)
Q Consensus 148 ~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~----~g~ft 223 (388)
. ..|+ +++.+|+.. +. ...+..-++ ..+|.++++. +|+++=+-.. .++++
T Consensus 166 ~-----~~G~-------~V~~~d~~~-------~~-~~~~~~g~~----~~~l~e~l~~--aDiVil~vp~~~~t~~~i~ 219 (333)
T 2d0i_A 166 I-----PFGV-------KLYYWSRHR-------KV-NVEKELKAR----YMDIDELLEK--SDIVILALPLTRDTYHIIN 219 (333)
T ss_dssp G-----GGTC-------EEEEECSSC-------CH-HHHHHHTEE----ECCHHHHHHH--CSEEEECCCCCTTTTTSBC
T ss_pred H-----HCCC-------EEEEECCCc-------ch-hhhhhcCce----ecCHHHHHhh--CCEEEEcCCCChHHHHHhC
Confidence 2 2363 688888742 11 111111111 1378898987 9988844221 25788
Q ss_pred HHHHHHHhcCCCCcEEEecCC
Q 016501 224 KEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 224 ~evi~~Ma~~~~rPIIFaLSN 244 (388)
++.++.|. +. ++.-.|+
T Consensus 220 ~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 220 EERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHHHHHTB---TC-EEEECSC
T ss_pred HHHHhhCC---CC-EEEECCC
Confidence 88888886 56 7777774
No 133
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=90.73 E-value=0.23 Score=46.80 Aligned_cols=60 Identities=22% Similarity=0.279 Sum_probs=44.6
Q ss_pred ccccC-ccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 99 VFNDD-IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 99 ~FnDD-iqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+++|. ..|+-. ...|++.+|+-.+.+++..+++|.|||.+|.++|..|. +.| +++++|++
T Consensus 99 ~~~~g~l~g~nT-d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~-----~~G--------~V~v~~r~ 159 (287)
T 1nvt_A 99 KIEDGKAIGYNT-DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELA-----KDN--------NIIIANRT 159 (287)
T ss_dssp EEETTEEEEECC-HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHT-----SSS--------EEEEECSS
T ss_pred EeeCCEEEEecC-CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHH-----HCC--------CEEEEECC
Confidence 34444 246222 67899999998888999999999999988888887772 122 68888874
No 134
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.71 E-value=0.14 Score=49.96 Aligned_cols=116 Identities=15% Similarity=0.212 Sum_probs=71.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc-CCCCCHHHHhcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKV 206 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~-~~~~~L~eav~~ 206 (388)
-.||.|+|||..|..+|..|.. .|+ ..++.++|.+-=..+.-.-+|++. .+|.... .-..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~-----~~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALIN-----QGI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HTC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 4689999999999999998843 254 258999998410000000123333 3343111 001223467877
Q ss_pred cCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 207 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 207 vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+|++|=+.+.+ |- +-+++++.+.++++.-+|+-.|||. .+..+-+++.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv---d~~t~~~~k~ 135 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV---DILTYATWKF 135 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH---HHHHHHHHHh
Confidence 99887544433 21 1267888888999999999999997 4555555554
No 135
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=90.69 E-value=0.79 Score=44.19 Aligned_cols=114 Identities=19% Similarity=0.167 Sum_probs=69.0
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 192 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~ 192 (388)
++.+++.++.. ....|+.|+|+|..|-.+++.+... .+ .++++++|+. .+ ......+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~----~~---~a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FD------IGEVKAYDVR----EK---AAKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECSS----HH---HHHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CC------ccEEEEECCC----HH---HHHHHHHHHHh
Confidence 34556655532 3568999999999999998887321 23 2678888873 11 22333333321
Q ss_pred c---cCCCCCHHHHhcccCCcEEEEecCCC-CCCCHHHHHHHhcCCCCcEEEecC--CCCCCCCCCHHHH
Q 016501 193 E---HEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAEEA 256 (388)
Q Consensus 193 ~---~~~~~~L~eav~~vkptvlIG~S~~~-g~ft~evi~~Ma~~~~rPIIFaLS--NPt~~~E~tpe~A 256 (388)
. .. ..++.|++ + .|++|=++..+ -.++.+++ .+.-.|+.++ +|. +-|+.++-.
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~~~ 231 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVEIL 231 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHHHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHHHH
Confidence 1 12 46899999 6 99998765532 23443332 2556888883 455 578877543
No 136
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=90.66 E-value=0.2 Score=53.23 Aligned_cols=38 Identities=26% Similarity=0.435 Sum_probs=33.3
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|++.||+++|+|..|..+|+.|+. .|+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~-----aGV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIA-----WGV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHH-----cCC------CEEEEEcCCC
Confidence 5899999999999999999999943 376 6999999974
No 137
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.61 E-value=0.16 Score=49.49 Aligned_cols=116 Identities=17% Similarity=0.252 Sum_probs=70.0
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCC--CCHHHHh
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 204 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~--~~L~eav 204 (388)
+..||.|+|||..|.++|..|.. .|+ + .+.++|.+-=..+.-..+|.+.. .+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988833 355 1 69999985210000001122211 111111111 1225788
Q ss_pred cccCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 205 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 205 ~~vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
++ +|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||. -...+-+++.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~ 135 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL---DIMVNMLQKF 135 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHh
Confidence 88 99888554443 21 1257778888999999999999997 3444455544
No 138
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=90.58 E-value=0.17 Score=48.70 Aligned_cols=123 Identities=20% Similarity=0.290 Sum_probs=76.1
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CC-ccccCCCCCccHhhhhhccccCC----CCCHH
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KG-LIVSSRKDSLQHFKKPWAHEHEP----VNNLL 201 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~--~G-lv~~~r~~~l~~~k~~~a~~~~~----~~~L~ 201 (388)
||+|.|| |..|..++..|+. .|+ ...+.|+|. +- .+... ..+|.+.. ++....-. ..++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~-~~dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGL-REDIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHH-HHHHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHH-HHHHHHhH-HhcCCCeEEEeCCcchH
Confidence 8999999 9999999888732 353 256999997 31 00000 01233222 23211101 12478
Q ss_pred HHhcccCCcEEEEecCCCC---C-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccC--CcEE
Q 016501 202 DAVKVIKPTILIGSSGVGR---T-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAI 265 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g---~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~--Grai 265 (388)
+++++ +|++|=+.+.+. - .++++++.|.+++ +.+|+--|||. .+..+-+++.+. -+-+
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv---~~~t~~~~k~~~~p~~rv 143 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV---DVMTYKALVDSKFERNQV 143 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH---HHHHHHHHHHHCCCTTSE
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH---HHHHHHHHHhhCcChhcE
Confidence 99998 999986665542 1 4668899999999 99999999997 445555555421 1245
Q ss_pred EeeCC
Q 016501 266 FASGS 270 (388)
Q Consensus 266 ~AtGs 270 (388)
|++|+
T Consensus 144 iG~gt 148 (313)
T 1hye_A 144 FGLGT 148 (313)
T ss_dssp EECTT
T ss_pred EEeCc
Confidence 66653
No 139
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=90.55 E-value=2.2 Score=41.20 Aligned_cols=121 Identities=14% Similarity=0.172 Sum_probs=80.2
Q ss_pred CCCcccccCccc---hHHHHHHHHHHHHHHh-------------------------CCCccccEEEEeCcchHHHHHHHH
Q 016501 95 TTHLVFNDDIQG---TASVVLAGVVAALKLI-------------------------GGTLAEHRFLFLGAGEAGTGIAEL 146 (388)
Q Consensus 95 ~~~~~FnDDiqG---Ta~V~lAgll~Al~~~-------------------------g~~L~d~riv~~GAGsAg~giA~l 146 (388)
..|++.|----. +|=-+++.+|+..|-. |..|...+|.|+|.|..|..+|+.
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 467777754333 3444788888877621 457899999999999999999999
Q ss_pred HHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecCC----CCCC
Q 016501 147 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGV----GRTF 222 (388)
Q Consensus 147 l~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~----~g~f 222 (388)
+. . .|+ +++.+|+.. +. ... ..+ .-...+|.++++. +|+++=+-.. .+++
T Consensus 169 l~-~----~G~-------~V~~~d~~~-------~~-~~~-~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AK-G----FNM-------RILYYSRTR-------KE-EVE-REL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HH-H----TTC-------EEEEECSSC-------CH-HHH-HHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HH-h----CCC-------EEEEECCCc-------ch-hhH-hhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 83 2 363 688888742 11 111 111 0112479999987 9988744211 2577
Q ss_pred CHHHHHHHhcCCCCcEEEecCC
Q 016501 223 TKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 223 t~evi~~Ma~~~~rPIIFaLSN 244 (388)
+++.++.|. +..++.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 888888886 5678877774
No 140
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.42 E-value=3.3 Score=41.90 Aligned_cols=192 Identities=13% Similarity=0.202 Sum_probs=119.6
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 153 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~ 153 (388)
..|++||--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+ ..
T Consensus 102 ~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l-~~--- 177 (416)
T 3k5p_A 102 RGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLA-ES--- 177 (416)
T ss_dssp TTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHH-HH---
T ss_pred cCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHH-HH---
Confidence 5789998743 34556678888888763 25679999999999999999999998 33
Q ss_pred hcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHHH
Q 016501 154 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 229 (388)
Q Consensus 154 ~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~~ 229 (388)
.|+ +++.+|+.. + .... -+ ....+|.|+++. .|+++=.-- ..+.|+++.++.
T Consensus 178 -~G~-------~V~~yd~~~-----~---~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~~ 233 (416)
T 3k5p_A 178 -LGM-------TVRYYDTSD-----K---LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLRK 233 (416)
T ss_dssp -TTC-------EEEEECTTC-----C---CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHHH
T ss_pred -CCC-------EEEEECCcc-----h---hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHhh
Confidence 265 688888741 1 1100 01 123589999998 999884321 127899999999
Q ss_pred HhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-C--CceeeCCEEecc-ccccccccchHHHHHHHHhCC
Q 016501 230 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVP-GQANNAYIFPGFGLGLVISGA 305 (388)
Q Consensus 230 Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGsp-f--~pv~~~Gr~~~p-~Q~NN~~iFPGlglG~l~~~a 305 (388)
|. +..++.=.|+=..--|-.-.+|++ .|+ |.+.|.. | +|..-+.....| -+..|+++-|=+|-..
T Consensus 234 mk---~gailIN~aRG~vvd~~aL~~aL~--~g~-i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T----- 302 (416)
T 3k5p_A 234 MK---KGAFLINNARGSDVDLEALAKVLQ--EGH-LAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGST----- 302 (416)
T ss_dssp SC---TTEEEEECSCTTSBCHHHHHHHHH--TTS-EEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCC-----
T ss_pred CC---CCcEEEECCCChhhhHHHHHHHHH--cCC-ccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCC-----
Confidence 97 788999888865323333334443 465 3333322 2 221111000112 3567999999875321
Q ss_pred cccCHHHHHHHHHHHHcccC
Q 016501 306 IRVHDDMLLAASEALAKQVT 325 (388)
Q Consensus 306 ~~Itd~m~~aAA~aLA~~v~ 325 (388)
..--+.|...+++.|.+...
T Consensus 303 ~ea~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 303 EEAQERIGTEVTRKLVEYSD 322 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 12224566666777766653
No 141
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=90.38 E-value=1.6 Score=41.79 Aligned_cols=174 Identities=13% Similarity=0.076 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 016501 107 TASVVLAGVVAALKLI----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 170 (388)
Q Consensus 107 Ta~V~lAgll~Al~~~----------------g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D 170 (388)
+|=-+++-+|+..|-. ...|.+.||.|+|.|..|..+|+.+ ..+ |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLA-KAF----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHH-HHH----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHH-Hhh----Cc-------EEEEEe
Confidence 3345777888777632 1358999999999999999999999 333 64 688888
Q ss_pred CCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 171 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 171 ~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+.. .. ... ++ ...+|.|+++. .|+++=+-- .-++++++.++.|. +..++.=.|.-.
T Consensus 153 r~~----~~---~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----VD---QNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----CC---TTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----cc---ccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 752 11 111 11 23579999988 998884321 23678999999886 778888888744
Q ss_pred CCCCCCHHHHhcccCCcEEEeeCCCC---CceeeCCEEeccccccccccchHHHHHHHHhCCcccCHHHHHHHHHHHHcc
Q 016501 247 SQSECTAEEAYTWSKGRAIFASGSPF---DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQ 323 (388)
Q Consensus 247 ~~~E~tpe~A~~~t~Grai~AtGspf---~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~ 323 (388)
.--|-.-.+|++ +|+.-.| |..+ +|. ..--+..|+++-|=++= .....-.+.|...+++-|...
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga-~lDV~~~EP~------~pL~~~~nvilTPHiag----~~t~e~~~~~~~~~~~ni~~~ 279 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWY-LSDVWWNEPE------ITETNLRNAILSPHVAG----GMSGEIMDIAIQLAFENVRNF 279 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEE-EESCCTTTTS------CCSCCCSSEEECCSCSS----CBTTBCCHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhhh--hccceEE-eeccccCCcc------cchhhhhhhhcCccccC----CccchHHHHHHHHHHHHHHhh
Confidence 222333334443 3443222 1111 121 11235578888887631 123455667777777777766
Q ss_pred cC
Q 016501 324 VT 325 (388)
Q Consensus 324 v~ 325 (388)
..
T Consensus 280 ~~ 281 (290)
T 3gvx_A 280 FE 281 (290)
T ss_dssp TC
T ss_pred hc
Confidence 54
No 142
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=90.34 E-value=2 Score=42.14 Aligned_cols=131 Identities=15% Similarity=0.184 Sum_probs=79.7
Q ss_pred CCcccccCc---cchHHHHHHHHHHHHHH--------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHH
Q 016501 96 THLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 152 (388)
Q Consensus 96 ~~~~FnDDi---qGTa~V~lAgll~Al~~--------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~ 152 (388)
.|++.|=-- +-+|=-+++-+|+..|- .|..|.+.||.|+|.|..|..+|+.+. .
T Consensus 116 gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~-~-- 192 (340)
T 4dgs_A 116 NIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAE-A-- 192 (340)
T ss_dssp TCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHH-T--
T ss_pred CEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHH-H--
Confidence 566666432 23555688888888762 246799999999999999999999983 2
Q ss_pred HhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHH
Q 016501 153 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 228 (388)
Q Consensus 153 ~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~ 228 (388)
.|+ +|+.+|+.. . ... .+ ....+|.|+++. .|+++=.-- ..++++++.++
T Consensus 193 --~G~-------~V~~~dr~~----~--~~~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~ 246 (340)
T 4dgs_A 193 --FGM-------SVRYWNRST----L--SGV-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQ 246 (340)
T ss_dssp --TTC-------EEEEECSSC----C--TTS-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHH
T ss_pred --CCC-------EEEEEcCCc----c--ccc-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHh
Confidence 364 588888742 1 110 11 113589999988 999884421 23678999999
Q ss_pred HHhcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 016501 229 AMASFNEKPLILALSNPTSQSECTAEEAYT 258 (388)
Q Consensus 229 ~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~ 258 (388)
.|. +.-++.=.|+-..--|-.-.+|++
T Consensus 247 ~mk---~gailIN~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 247 ALG---PEGIVVNVARGNVVDEDALIEALK 273 (340)
T ss_dssp HTT---TTCEEEECSCC-------------
T ss_pred cCC---CCCEEEECCCCcccCHHHHHHHHH
Confidence 997 677888888855334444445553
No 143
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.24 E-value=1 Score=42.90 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 192 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~ 192 (388)
.|++.+|+-.| +.|++|+|||.+|.+++..|.. .| .+|++++|. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~-----~G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKK-----QG-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 7899999999999999988832 24 578888874 23311222 1210
Q ss_pred ccCCCCCHHHHhcccCCcEEEEecCCC----CCCCHHHHH-HHhcCCCCcEEEecC-CC
Q 016501 193 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS-NP 245 (388)
Q Consensus 193 ~~~~~~~L~eav~~vkptvlIG~S~~~----g~ft~evi~-~Ma~~~~rPIIFaLS-NP 245 (388)
......+|. ++|++|-++..+ -.+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 111122232 599999776553 147777555 444 456777654 44
No 144
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.08 E-value=0.25 Score=47.98 Aligned_cols=117 Identities=15% Similarity=0.249 Sum_probs=72.5
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC--ccccCCCCCccHhhhhhccccCCC--CCHH
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 201 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G--lv~~~r~~~l~~~k~~~a~~~~~~--~~L~ 201 (388)
.+..||.|+|||..|.++|..|.. .|+ .++.++|.+- -..+....+|.+. .++....... .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~-----~g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQ-----KEL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 356799999999999999998843 353 3799999862 1111111123322 2333211111 1225
Q ss_pred HHhcccCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 202 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+++++ +|++|=+.+.+ |- +-+++++.+.++++.-+|+-.|||. .+...-+++.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv---d~~t~~~~k~ 140 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV---DAMTYSVFKE 140 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH---HHHHHHHHHh
Confidence 67887 99887554433 21 2357888899999999999999997 4444445443
No 145
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=90.06 E-value=3.4 Score=40.55 Aligned_cols=120 Identities=14% Similarity=0.206 Sum_probs=83.6
Q ss_pred CCcccccCcc---chHHHHHHHHHHHHHH----------h----------CCCccccEEEEeCcchHHHHHHHHHHHHHH
Q 016501 96 THLVFNDDIQ---GTASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEIS 152 (388)
Q Consensus 96 ~~~~FnDDiq---GTa~V~lAgll~Al~~----------~----------g~~L~d~riv~~GAGsAg~giA~ll~~~~~ 152 (388)
.|++.|=--- .+|=-+++-+|+..|- . |..|.+.+|.|+|.|..|..+|+.+ ..
T Consensus 93 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l-~~-- 169 (343)
T 2yq5_A 93 NLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIF-SA-- 169 (343)
T ss_dssp -CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHH-HH--
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHH-hh--
Confidence 6777775322 3455678888887751 2 4468899999999999999999998 33
Q ss_pred HhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHH
Q 016501 153 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 228 (388)
Q Consensus 153 ~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~ 228 (388)
.|+ +++.+|+.. + +.. ...++ ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 170 --~G~-------~V~~~d~~~-----~-~~~----~~~~~----~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~ 224 (343)
T 2yq5_A 170 --MGA-------KVIAYDVAY-----N-PEF----EPFLT----YTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQLK 224 (343)
T ss_dssp --TTC-------EEEEECSSC-----C-GGG----TTTCE----ECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred --CCC-------EEEEECCCh-----h-hhh----hcccc----ccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHHh
Confidence 264 688888752 1 101 11111 2389999988 999985532 23789999999
Q ss_pred HHhcCCCCcEEEecCCCC
Q 016501 229 AMASFNEKPLILALSNPT 246 (388)
Q Consensus 229 ~Ma~~~~rPIIFaLSNPt 246 (388)
.|. +..++.=.|.-.
T Consensus 225 ~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 225 EMK---KSAYLINCARGE 239 (343)
T ss_dssp HSC---TTCEEEECSCGG
T ss_pred hCC---CCcEEEECCCCh
Confidence 997 778988888744
No 146
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=89.80 E-value=0.31 Score=47.00 Aligned_cols=115 Identities=20% Similarity=0.243 Sum_probs=71.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCC--CCCHHHHhcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~--~~~L~eav~~ 206 (388)
.||.|+|||.-|..+|-+|.. .|+ ...+.|+|..-=...+-.-+|.+.. .|...... ..+-.+++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~-----~~~-----~~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i~~~~d~~~~~~ 69 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLL-----NLD-----VDEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKIVGGADYSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----HSC-----CSEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEEEEESCGGGGTT
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeEecCCCHHHhCC
Confidence 389999999999999988843 254 2579999975211111112344322 22211111 1223456777
Q ss_pred cCCcEEEEecCCCCC--CC------------HHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 207 IKPTILIGSSGVGRT--FT------------KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 207 vkptvlIG~S~~~g~--ft------------~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
.|++|=+.+.+.- -| +++++.+++++++.||+-.|||. .....-+++.
T Consensus 70 --aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv---d~~t~i~~k~ 131 (294)
T 2x0j_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKE 131 (294)
T ss_dssp --CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHH
T ss_pred --CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc---hhhHHhhHHH
Confidence 9999866665422 12 46788888999999999999997 4444455554
No 147
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=89.75 E-value=3.6 Score=40.12 Aligned_cols=125 Identities=15% Similarity=0.081 Sum_probs=82.2
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH-------------------------hCCCccccEEEEeCcchHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL-------------------------IGGTLAEHRFLFLGAGEAGTGIAEL 146 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~-------------------------~g~~L~d~riv~~GAGsAg~giA~l 146 (388)
..|++.|--- +.+|=-+++.+|+.+|- .|..|.+.+|.|+|.|..|..+|+.
T Consensus 102 ~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~ 181 (348)
T 2w2k_A 102 RGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPRGHVLGAVGLGAIQKEIARK 181 (348)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHH
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCCCCEEEEEEECHHHHHHHHH
Confidence 4677777543 34555578888886542 2567999999999999999999998
Q ss_pred HHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCC
Q 016501 147 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTF 222 (388)
Q Consensus 147 l~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~f 222 (388)
+... .|+ +|+.+|+.. +.....+..-++ ...+|.++++. +|+++=+-- ..+++
T Consensus 182 l~~~----~G~-------~V~~~d~~~-------~~~~~~~~~g~~---~~~~l~ell~~--aDvVil~vp~~~~t~~li 238 (348)
T 2w2k_A 182 AVHG----LGM-------KLVYYDVAP-------ADAETEKALGAE---RVDSLEELARR--SDCVSVSVPYMKLTHHLI 238 (348)
T ss_dssp HHHT----TCC-------EEEEECSSC-------CCHHHHHHHTCE---ECSSHHHHHHH--CSEEEECCCCSGGGTTCB
T ss_pred HHHh----cCC-------EEEEECCCC-------cchhhHhhcCcE---EeCCHHHHhcc--CCEEEEeCCCChHHHHHh
Confidence 8312 364 688888742 111111110011 12478999987 999885421 23688
Q ss_pred CHHHHHHHhcCCCCcEEEecCCC
Q 016501 223 TKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 223 t~evi~~Ma~~~~rPIIFaLSNP 245 (388)
+++.++.|. +..||.-.|+-
T Consensus 239 ~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 239 DEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp CHHHHHHSC---TTEEEEECSCG
T ss_pred hHHHHhcCC---CCCEEEECCCC
Confidence 899999886 56787766664
No 148
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=89.68 E-value=1.4 Score=42.48 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh-hhhhcc
Q 016501 114 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH 192 (388)
Q Consensus 114 gll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~-k~~~a~ 192 (388)
+.+++-.+..+ ...++.|+|+|..|-..++.|... .+ -++|+++|+. +.+.+... +..+--
T Consensus 109 s~laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~------~~~V~v~~r~------~a~~la~~l~~~~g~ 170 (313)
T 3hdj_A 109 TVLAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FA------LEAILVHDPY------ASPEILERIGRRCGV 170 (313)
T ss_dssp HHHHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SC------CCEEEEECTT------CCHHHHHHHHHHHTS
T ss_pred HHHHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CC------CcEEEEECCc------HHHHHHHHHHHhcCC
Confidence 33444444333 467999999999999998887321 23 3789999987 21222211 111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEecCCC-CCCCHHHHHHHhcCCCCcEEEecCC--CCCCCCCCHHHHh
Q 016501 193 EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEAY 257 (388)
Q Consensus 193 ~~~~~~~L~eav~~vkptvlIG~S~~~-g~ft~evi~~Ma~~~~rPIIFaLSN--Pt~~~E~tpe~A~ 257 (388)
+.... ++.|++++ +|++|-+.... .+|..++++ +..+|..++- |. +-|+.++-..
T Consensus 171 ~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l~------~G~~V~~vGs~~p~-~~El~~~~~~ 228 (313)
T 3hdj_A 171 PARMA-APADIAAQ--ADIVVTATRSTTPLFAGQALR------AGAFVGAIGSSLPH-TRELDDEALR 228 (313)
T ss_dssp CEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGCC------TTCEEEECCCSSTT-CCCCCHHHHH
T ss_pred eEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHcC------CCcEEEECCCCCCc-hhhcCHHHHh
Confidence 11123 89999998 99999765433 345655443 6778888876 44 5799988653
No 149
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.65 E-value=0.84 Score=40.88 Aligned_cols=80 Identities=16% Similarity=0.248 Sum_probs=50.3
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHH
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 203 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~ea 203 (388)
..+...||.|+|+|..|..+|..|.. .| .+++++|++ ++ +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~-----~g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEI-----AG-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEcCC--------HH--------------------H
Confidence 34677899999999999999999832 35 368888753 11 2
Q ss_pred hcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 204 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
++. +|++| ++.. ....+++++.+....+..+|.-+||+.+
T Consensus 55 ~~~--aD~vi-~av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TTL--GEIVI-MAVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SSC--CSEEE-ECSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hcc--CCEEE-EcCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 333 77766 3322 2345677777654333678889999653
No 150
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=89.57 E-value=0.48 Score=47.63 Aligned_cols=97 Identities=19% Similarity=0.286 Sum_probs=50.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChh-hhcCcEEEEcCCC-------ccccCCC--CCccHhhhhhccccCCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVE-ETRKKICLVDSKG-------LIVSSRK--DSLQHFKKPWAHEHEPVN 198 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~-eA~~~i~l~D~~G-------lv~~~r~--~~l~~~k~~~a~~~~~~~ 198 (388)
.||.|+|||+=|+++|..|.... . +.+.- +-.-++|..|..= .+.+.|. ..|+..+.+ ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng-~--~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENC-K--GYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH-H--HCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcC-C--CccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 49999999999999999995432 1 11000 0012466555421 1222220 112222221 0001125
Q ss_pred CHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCC
Q 016501 199 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN 234 (388)
Q Consensus 199 ~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~ 234 (388)
+|.+++++ +|++|=+ +|=-|-+++++.+..+-
T Consensus 110 dl~~al~~--ad~ii~a--vPs~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVFN--IPHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEEEC--SCGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEEEE--CChhhhHHHHHHhcccc
Confidence 78888887 7766522 12246777777776543
No 151
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.56 E-value=3.9 Score=40.96 Aligned_cols=194 Identities=17% Similarity=0.158 Sum_probs=112.4
Q ss_pred cCCCcccccCc---cchHHHHHHHHHHHHHH------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHH
Q 016501 94 GTTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 152 (388)
Q Consensus 94 r~~~~~FnDDi---qGTa~V~lAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~ 152 (388)
+..|+++|--- +.+|=-+++.+|+..|- .|..|.+.++.|+|-|..|..+|+.+ ..
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l-~~-- 166 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILA-ES-- 166 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHH-HH--
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHH-HH--
Confidence 35789998643 34555688999988873 25679999999999999999999998 33
Q ss_pred HhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHHH
Q 016501 153 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 228 (388)
Q Consensus 153 ~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi~ 228 (388)
.|+ +++.+|+..- ..+. -++ ...+|.|+++. .|+++=.- ...++|+++.++
T Consensus 167 --~G~-------~V~~~d~~~~------~~~~-----~~~---~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 167 --LGM-------YVYFYDIENK------LPLG-----NAT---QVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp --TTC-------EEEEECSSCC------CCCT-----TCE---ECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred --CCC-------EEEEEcCCch------hccC-----Cce---ecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 364 5888887421 1110 011 13479999988 99988542 122689999999
Q ss_pred HHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeC--CCCCceeeCCEEecc-ccccccccchHHHHHHHHhCC
Q 016501 229 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASG--SPFDPFEYNGKVFVP-GQANNAYIFPGFGLGLVISGA 305 (388)
Q Consensus 229 ~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtG--spf~pv~~~Gr~~~p-~Q~NN~~iFPGlglG~l~~~a 305 (388)
.|. +.-++.=.|.=..--|-.-.+|++ .|+.--|.= -+-+|..-+.....| -+..|+++-|=+|-..
T Consensus 222 ~mk---~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T----- 291 (404)
T 1sc6_A 222 LMK---PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGST----- 291 (404)
T ss_dssp HSC---TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCS-----
T ss_pred hcC---CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCc-----
Confidence 996 677888888633112222233433 454321100 001111100000011 2456899999775211
Q ss_pred cccCHHHHHHHHHHHHcccC
Q 016501 306 IRVHDDMLLAASEALAKQVT 325 (388)
Q Consensus 306 ~~Itd~m~~aAA~aLA~~v~ 325 (388)
..-.+.|...+++.|.....
T Consensus 292 ~ea~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 292 QEAQENIGLEVAGKLIKYSD 311 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 11123355556666665543
No 152
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.56 E-value=2.1 Score=41.50 Aligned_cols=138 Identities=10% Similarity=0.098 Sum_probs=90.5
Q ss_pred eeeccCCCchHHHHHHHHcCCCcccccCcc---chHHHHHHHHHHHHHH-------------------hCCCccccEEEE
Q 016501 76 IQFEDFANHNAFELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLF 133 (388)
Q Consensus 76 I~~EDf~~~~af~iL~ryr~~~~~FnDDiq---GTa~V~lAgll~Al~~-------------------~g~~L~d~riv~ 133 (388)
|+.--.+..|- .+-.--+..|++.|=--. .+|=-+++.+|+..|- .|..|.+.+|.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55555555542 111112346777775333 3455588888888761 235689999999
Q ss_pred eCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEE
Q 016501 134 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 213 (388)
Q Consensus 134 ~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlI 213 (388)
+|.|..|..+|+.+ .. .|+ +++.+|+.. +. .+. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l-~~----~G~-------~V~~~d~~~----~~--~~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIF-HG----MGA-------TVIGEDVFE----IK--GIE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHH-HH----TTC-------EEEEECSSC----CC--SCT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHH-HH----CCC-------EEEEECCCc----cH--HHH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999998 33 364 588888742 11 111 1121 2379999987 99998
Q ss_pred Eec----CCCCCCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 214 GSS----GVGRTFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 214 G~S----~~~g~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
=+- ...++++++.++.|. +..++.=.|.-
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~srg 236 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCARG 236 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSCG
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCCc
Confidence 641 123789999999996 67788888853
No 153
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=89.51 E-value=0.25 Score=52.41 Aligned_cols=38 Identities=26% Similarity=0.446 Sum_probs=33.5
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|++.||+++|||..|..+|+.|+. .|+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~-----aGV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIA-----WGV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHT-----TTC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 57899999999999999999999943 476 799999986
No 154
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.10 E-value=0.46 Score=38.29 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=25.8
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999998832 34 368888874
No 155
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=89.02 E-value=0.8 Score=44.69 Aligned_cols=188 Identities=15% Similarity=0.117 Sum_probs=113.2
Q ss_pred CCCcccccC-cc--chHHHHHHHHHHHHHH----------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHHhc
Q 016501 95 TTHLVFNDD-IQ--GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 155 (388)
Q Consensus 95 ~~~~~FnDD-iq--GTa~V~lAgll~Al~~----------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~ 155 (388)
..|++.|=- .. .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+ .. .
T Consensus 88 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l-~~----~ 162 (324)
T 3hg7_A 88 RDYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTG-KH----F 162 (324)
T ss_dssp CSSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHH-HH----T
T ss_pred CCEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHH-Hh----C
Confidence 357777743 22 2444578888887763 35689999999999999999999999 33 2
Q ss_pred CCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHHHHHh
Q 016501 156 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMA 231 (388)
Q Consensus 156 G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi~~Ma 231 (388)
|+ +++.+|+.. ... .... . .....+|.|+++. .|+++=.- ...++|+++.++.|.
T Consensus 163 G~-------~V~~~dr~~---~~~-~~~~-------~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk 221 (324)
T 3hg7_A 163 GM-------KVLGVSRSG---RER-AGFD-------Q-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK 221 (324)
T ss_dssp TC-------EEEEECSSC---CCC-TTCS-------E-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC
T ss_pred CC-------EEEEEcCCh---HHh-hhhh-------c-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC
Confidence 64 688888764 111 1111 1 1123579999987 99988541 123678888888886
Q ss_pred cCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----eCCCCCceeeCCEEeccccccccccchHHHHHHHHhCCc
Q 016501 232 SFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAI 306 (388)
Q Consensus 232 ~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~A-----tGspf~pv~~~Gr~~~p~Q~NN~~iFPGlglG~l~~~a~ 306 (388)
+..|+.=.|+-..--|-.-.+|++ +|+.-.| ..-|.++- ..--+..|+++-|=++ ..+
T Consensus 222 ---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~------~pL~~~~nvilTPHia------~~t 284 (324)
T 3hg7_A 222 ---PGAILFNVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD------SPLWGQPNLIITPHNS------AYS 284 (324)
T ss_dssp ---TTCEEEECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT------CTTTTCTTEEECCSCS------SCC
T ss_pred ---CCcEEEECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC------ChhhcCCCEEEeCCCc------ccc
Confidence 678888888744222333334443 3443211 11121110 0012456888888774 222
Q ss_pred ccCHHHHHHHHHHHHcccCc
Q 016501 307 RVHDDMLLAASEALAKQVTE 326 (388)
Q Consensus 307 ~Itd~m~~aAA~aLA~~v~~ 326 (388)
. ...|...+++-|.....-
T Consensus 285 ~-~~~~~~~~~~nl~~~~~G 303 (324)
T 3hg7_A 285 F-PDDVAQIFVRNYIRFIDG 303 (324)
T ss_dssp C-HHHHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHHHHHHHHHHcC
Confidence 2 356777777777666543
No 156
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.90 E-value=1.7 Score=42.65 Aligned_cols=96 Identities=10% Similarity=0.198 Sum_probs=60.9
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc-cCCCCCHHHHh
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 204 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~-~~~~~~L~eav 204 (388)
++..||.|+|.|..|..+|..|.. .| -+++++|+.- +.+. .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~-----~G-------~~V~v~dr~~-------~~~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRK-----GG-------HECVVYDLNV-------NAVQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCH-------HHHH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHh-----CC-------CEEEEEeCCH-------HHHH----HHHHCCCEEeCCHHHHH
Confidence 456799999999999999999843 35 3577777631 1111 12221 12346788888
Q ss_pred ccc-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 205 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 205 ~~v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
+.. +||++| ++...+ -.+++++.+..+. +.-||.-+||-.
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 763 458877 333334 7778888876543 566888787744
No 157
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.84 E-value=0.71 Score=42.20 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=57.4
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhh---hhhccccCCCCCHHHHhcc
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 206 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k---~~~a~~~~~~~~L~eav~~ 206 (388)
||.|+|+|..|..+|..|.. .| .+++++|++- ++.+.+.... ..+ ...... +..++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK-----QG-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTA-NDPDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEE-SCHHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHh-----CC-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeee-cCccccCC
Confidence 79999999999999999842 35 3688888752 1111111100 000 000001 23567766
Q ss_pred cCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 207 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 207 vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
+|++| ++.... -.+++++.+..+. +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 89888 443333 3689999888654 456777789975
No 158
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.79 E-value=0.92 Score=43.20 Aligned_cols=109 Identities=13% Similarity=0.185 Sum_probs=64.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh-----hhccc---c---CC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE---H---EP 196 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~-----~~a~~---~---~~ 196 (388)
..||.|+|+|..|.++|..|... |........+++++|++.-.. .+ ......++ .|-.. . ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIG-GK-KLTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSS-SS-BHHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhh-hh-HHHHHHHhcCcccccCCcccCccCeEE
Confidence 36999999999999999999543 310000014688888753211 00 01111111 01000 0 01
Q ss_pred CCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 197 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 197 ~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
..++.++++. +|++| ++.. .-..+++++.+..+. +..+|..++|-..
T Consensus 81 ~~~~~~~~~~--aD~Vi-lav~-~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 81 VPDVVQAAED--ADILI-FVVP-HQFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp ESSHHHHHTT--CSEEE-ECCC-GGGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred EcCHHHHHcC--CCEEE-EeCC-HHHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 2478888886 89877 4433 357789999887654 4678899999654
No 159
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.77 E-value=0.12 Score=44.83 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=28.4
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhc-CCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQT-KAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~-G~s~~eA~~~i~l~D~~ 172 (388)
++.+.+|+|+|+|..|..+|+.|.. . | .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~-----~~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRA-----RYG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHH-----HHC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHh-----ccC-------CeEEEEECC
Confidence 3567799999999999999999832 3 4 368888874
No 160
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.58 E-value=0.39 Score=48.92 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhCCCeeeeeccCCCchHHHHHHHHc-CCCccc--ccCccchHHHHHHHHHHHHHHhCC--------Cccc
Q 016501 60 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIGG--------TLAE 128 (388)
Q Consensus 60 defv~av~~~fGp~~~I~~EDf~~~~af~iL~ryr-~~~~~F--nDDiqGTa~V~lAgll~Al~~~g~--------~L~d 128 (388)
..+++.+...+ ++ |.++-+....-.++-++|. ..+|++ |+..-+.+.....-|...++-... .-..
T Consensus 136 ~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (521)
T 1hyu_A 136 VQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRDA 212 (521)
T ss_dssp HHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSCC
T ss_pred HHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccCc
Confidence 33444444445 32 4444444445556677775 356644 666667776666667766543210 1135
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|+|.||+..|..+.. .|+ ++.++|++
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred ccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 679999999999999998832 363 57777753
No 161
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=88.55 E-value=3.4 Score=40.18 Aligned_cols=139 Identities=16% Similarity=0.144 Sum_probs=91.2
Q ss_pred CCCccccc-Cc--cchHHHHHHHHHHHHHH-------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHH
Q 016501 95 TTHLVFND-DI--QGTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 152 (388)
Q Consensus 95 ~~~~~FnD-Di--qGTa~V~lAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~ 152 (388)
..|++.|= +. +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+ ..
T Consensus 86 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l-~~-- 162 (334)
T 2pi1_A 86 KGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYG-LA-- 162 (334)
T ss_dssp HTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHH-HH--
T ss_pred CCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHH-HH--
Confidence 36777664 22 23555678888887752 36679999999999999999999999 33
Q ss_pred HhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHHH
Q 016501 153 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 228 (388)
Q Consensus 153 ~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi~ 228 (388)
.|+ +++.+|+.. +.. .. ...-...+|.|+++. .|+++=.- ...++|+++.++
T Consensus 163 --~G~-------~V~~~d~~~-------~~~--~~----~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 218 (334)
T 2pi1_A 163 --FGM-------KVLCYDVVK-------RED--LK----EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERIS 218 (334)
T ss_dssp --TTC-------EEEEECSSC-------CHH--HH----HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred --CcC-------EEEEECCCc-------chh--hH----hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHh
Confidence 264 688888742 111 10 101112359999987 99988541 223689999999
Q ss_pred HHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEE
Q 016501 229 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 265 (388)
Q Consensus 229 ~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai 265 (388)
.|. +..|+.=.|+-..--|-.-.+|++ .|+.-
T Consensus 219 ~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~ 250 (334)
T 2pi1_A 219 LMK---DGVYLINTARGKVVDTDALYRAYQ--RGKFS 250 (334)
T ss_dssp HSC---TTEEEEECSCGGGBCHHHHHHHHH--TTCEE
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 996 677888888754223333334443 45543
No 162
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.48 E-value=0.88 Score=42.17 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=58.3
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
-.||.|+|+|..|..+|..|.. .|. ..+++++|++. +.+...++.-.. .....++.++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~-----~g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR-----DHP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HCT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHh-----CCC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 3689999999999999998843 232 14688888641 111111110000 0112456677776
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHhcC--CCCcEEEecCCCC
Q 016501 208 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPT 246 (388)
Q Consensus 208 kptvlIG~S~~~g~ft~evi~~Ma~~--~~rPIIFaLSNPt 246 (388)
+|++| ++..+... +++++.+..+ .+..||.-+||-.
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~~ 104 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGSTK 104 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSCH
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCCc
Confidence 88887 44433333 8888888764 3566777677743
No 163
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.47 E-value=0.28 Score=45.45 Aligned_cols=97 Identities=15% Similarity=0.211 Sum_probs=55.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc---------cCCCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---------HEPVNN 199 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~---------~~~~~~ 199 (388)
.||.|+|+|..|..+|..|.. .| .+++++|++.= .+...++.-.+. .....+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g-------~~V~~~~r~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~ 64 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-----GG-------NDVTLIDQWPA-------HIEAIRKNGLIADFNGEEVVANLPIFS 64 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH-------HHHHHHHHCEEEEETTEEEEECCCEEC
T ss_pred CeEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEECCHH-------HHHHHHhCCEEEEeCCCeeEecceeec
Confidence 489999999999999998832 35 36888887521 111111100000 000012
Q ss_pred HHHHhccc-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 200 LLDAVKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 200 L~eav~~v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
..|+.+.+ ++|++| ++... -..+++++.++.+. +..+|..++|..
T Consensus 65 ~~~~~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~ 111 (316)
T 2ew2_A 65 PEEIDHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGL 111 (316)
T ss_dssp GGGCCTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSS
T ss_pred chhhcccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 22332211 388887 44333 24688888887654 467888899976
No 164
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.47 E-value=0.65 Score=45.31 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=26.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
-.||.|+|||..|.|||-.++. .|+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~-----~G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS-----GGF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 4689999999999999988843 475 58888864
No 165
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=88.18 E-value=0.67 Score=43.89 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 113 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 113 Agll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.|+..+++-.|.. ...|++++|||.+|.+++..|.. .|. ++|++++|.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666777766654 56899999999999999888732 364 678888774
No 166
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.97 E-value=0.83 Score=46.79 Aligned_cols=36 Identities=6% Similarity=-0.145 Sum_probs=26.2
Q ss_pred ccccccccccchHHHHHHHHhCCcccCHHHHHHHHH
Q 016501 283 VPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 318 (388)
Q Consensus 283 ~p~Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA~ 318 (388)
.||+.-|-+.+|.+.=++.+....-++.+-+..+.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 688888888889888787777333367776666644
No 167
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=87.96 E-value=2.5 Score=41.59 Aligned_cols=192 Identities=15% Similarity=0.100 Sum_probs=115.2
Q ss_pred CCCcccccC--ccchHHHHHHHHHHHHHH----------------------------hCCCccccEEEEeCcchHHHHHH
Q 016501 95 TTHLVFNDD--IQGTASVVLAGVVAALKL----------------------------IGGTLAEHRFLFLGAGEAGTGIA 144 (388)
Q Consensus 95 ~~~~~FnDD--iqGTa~V~lAgll~Al~~----------------------------~g~~L~d~riv~~GAGsAg~giA 144 (388)
..|++.|-- -+.+|=-+++-+|+..|- .|..|++.+|.|+|.|..|..+|
T Consensus 97 ~gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA 176 (352)
T 3gg9_A 97 KGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVA 176 (352)
T ss_dssp HTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHH
Confidence 467777632 234555678888887763 25678999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCC
Q 016501 145 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGR 220 (388)
Q Consensus 145 ~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g 220 (388)
+.+ .. .|+ +++.+|+.. . . ......-+ ....+|.|+++. .|+++=.- ...+
T Consensus 177 ~~l-~~----~G~-------~V~~~d~~~--~--~----~~~~~~g~---~~~~~l~ell~~--aDiV~l~~Plt~~t~~ 231 (352)
T 3gg9_A 177 GYG-RA----FGM-------NVLVWGREN--S--K----ERARADGF---AVAESKDALFEQ--SDVLSVHLRLNDETRS 231 (352)
T ss_dssp HHH-HH----TTC-------EEEEECSHH--H--H----HHHHHTTC---EECSSHHHHHHH--CSEEEECCCCSTTTTT
T ss_pred HHH-Hh----CCC-------EEEEECCCC--C--H----HHHHhcCc---eEeCCHHHHHhh--CCEEEEeccCcHHHHH
Confidence 998 33 364 688888642 0 0 00000000 123589999988 99988532 1237
Q ss_pred CCCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCC-C--CceeeCCEEeccccccccccchHHH
Q 016501 221 TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQANNAYIFPGFG 297 (388)
Q Consensus 221 ~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGsp-f--~pv~~~Gr~~~p~Q~NN~~iFPGlg 297 (388)
+++++.++.|. +..++.=.|+-..--|-.-.+|++ +|+.-.| |.. | +|..- ...--+..|+++-|=++
T Consensus 232 li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA-~lDV~~~EPl~~---~~pL~~~~nvilTPHia 302 (352)
T 3gg9_A 232 IITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMA-AIDVFETEPILQ---GHTLLRMENCICTPHIG 302 (352)
T ss_dssp CBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEE-EECCCSSSCCCS---CCGGGGCTTEEECCSCT
T ss_pred hhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEE-EecccCCCCCCC---CChhhcCCCEEECCCCC
Confidence 89999999997 788999898854334555556654 3543211 110 1 11100 00112457899999774
Q ss_pred HHHHHhCCcccCHHHHHHHHHHHHcccC
Q 016501 298 LGLVISGAIRVHDDMLLAASEALAKQVT 325 (388)
Q Consensus 298 lG~l~~~a~~Itd~m~~aAA~aLA~~v~ 325 (388)
- ....-.+.|...+++-|.....
T Consensus 303 ~-----~t~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 303 Y-----VERESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp T-----CBHHHHHHHHHHHHHHHHHHHT
T ss_pred C-----CCHHHHHHHHHHHHHHHHHHHc
Confidence 1 1111224566666666666543
No 168
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=87.93 E-value=0.34 Score=46.37 Aligned_cols=110 Identities=18% Similarity=0.144 Sum_probs=66.2
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc---cccCCCCCccHhhhhhccccCCCCCHHHHh
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 204 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl---v~~~r~~~l~~~k~~~a~~~~~~~~L~eav 204 (388)
.||+|.|| |.-|..++..|.. .|.--..-...++++|...- ..... .++.+...+|..+-....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~-~dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVV-MELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHH-HHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchh-hhhhcccccccCCeEeccChHHHh
Confidence 58999997 9999999988732 34300000137999997520 00000 112111112322212225788999
Q ss_pred cccCCcEEEEecCCCCC--------------CCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 205 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g~--------------ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
++ +|++|=+.+.+.. .|.++++.+.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 87 9999977665532 3566788888876 666888899996
No 169
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=87.85 E-value=5.1 Score=38.73 Aligned_cols=136 Identities=18% Similarity=0.237 Sum_probs=74.7
Q ss_pred cCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCC
Q 016501 102 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD 181 (388)
Q Consensus 102 DDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~ 181 (388)
++.++.-...++..+.+++..+.+ ..++|+|.|||+.|...+.+. +..|. ++++.+|+.
T Consensus 158 ~~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqla-----k~~Ga------~~Vi~~~~~--------- 216 (370)
T 4ej6_A 158 DPVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLA-----RLAGA------TTVILSTRQ--------- 216 (370)
T ss_dssp CTTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHH-----HHTTC------SEEEEECSC---------
T ss_pred CHHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHH-----HHcCC------CEEEEECCC---------
Confidence 445665555666667777666654 578999999997777665554 33473 578877753
Q ss_pred CccHhhhhhccc-------cCCCCCHHHHhcc---c---CCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCC-
Q 016501 182 SLQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS- 247 (388)
Q Consensus 182 ~l~~~k~~~a~~-------~~~~~~L~eav~~---v---kptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~- 247 (388)
+.+..++++ .....++.+.++. . +.|++|=+++.+ ..-++.++.++. .=-|.-+..+..
T Consensus 217 ---~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~~---~G~vv~~G~~~~~ 289 (370)
T 4ej6_A 217 ---ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAKA---GGTVVILGVLPQG 289 (370)
T ss_dssp ---HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECSCCCTT
T ss_pred ---HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhcc---CCEEEEEeccCCC
Confidence 223333332 1112456666654 1 579999877532 233455555542 222333333322
Q ss_pred -CCCCCHHHHhcccCCcEEEe
Q 016501 248 -QSECTAEEAYTWSKGRAIFA 267 (388)
Q Consensus 248 -~~E~tpe~A~~~t~Grai~A 267 (388)
..+..+.+.+. ++.-|..
T Consensus 290 ~~~~~~~~~~~~--~~~~i~g 308 (370)
T 4ej6_A 290 EKVEIEPFDILF--RELRVLG 308 (370)
T ss_dssp CCCCCCHHHHHH--TTCEEEE
T ss_pred CccccCHHHHHh--CCcEEEE
Confidence 34566655532 3444444
No 170
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.81 E-value=1.2 Score=41.42 Aligned_cols=91 Identities=13% Similarity=0.206 Sum_probs=58.1
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
.||.|+|+ |..|..+|..|.. .| .+++++|++- +.+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g-------~~V~~~~r~~-------~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SA-------HHLAAIEIAP-------EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SS-------SEEEEECCSH-------HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEEECCH-------HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999999832 35 3688888631 11111111 1 1111356777876
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 208 KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 208 kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
+|++| ++..+.. .+++++.+..+. +..||.-+|+..
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 89888 4433333 688888887543 456787799864
No 171
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=87.81 E-value=3.9 Score=39.18 Aligned_cols=118 Identities=19% Similarity=0.209 Sum_probs=81.2
Q ss_pred cCCCccccc-Cccc--hHHHHHHHHHHHHHHh-----------------CCCccccEEEEeCcchHHHHHHHHHHHHHHH
Q 016501 94 GTTHLVFND-DIQG--TASVVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISK 153 (388)
Q Consensus 94 r~~~~~FnD-DiqG--Ta~V~lAgll~Al~~~-----------------g~~L~d~riv~~GAGsAg~giA~ll~~~~~~ 153 (388)
+..+++.|- +... +|=-+++.+|+..|-. +..|.+.+|.|+|.|..|..+|+.+. .
T Consensus 70 ~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~-~--- 145 (303)
T 1qp8_A 70 PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILA-A--- 145 (303)
T ss_dssp CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHH-H---
T ss_pred hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHH-H---
Confidence 346777763 3333 3334788888877632 23689999999999999999999983 3
Q ss_pred hcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHHHH
Q 016501 154 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 229 (388)
Q Consensus 154 ~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi~~ 229 (388)
.|+ +++.+|+..- .. . .....+|.|+++. .|+++=+- ...++++++.++.
T Consensus 146 -~G~-------~V~~~dr~~~---------~~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~ 199 (303)
T 1qp8_A 146 -LGA-------QVRGFSRTPK---------EG---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLAL 199 (303)
T ss_dssp -TTC-------EEEEECSSCC---------CS---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCcc---------cc---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhh
Confidence 364 5888887532 10 0 1123578899987 99988552 2236788888888
Q ss_pred HhcCCCCcEEEecCC
Q 016501 230 MASFNEKPLILALSN 244 (388)
Q Consensus 230 Ma~~~~rPIIFaLSN 244 (388)
|. +..++.=.|+
T Consensus 200 mk---~gailin~sr 211 (303)
T 1qp8_A 200 MA---EDAVFVNVGR 211 (303)
T ss_dssp SC---TTCEEEECSC
T ss_pred CC---CCCEEEECCC
Confidence 86 6778888887
No 172
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=87.77 E-value=3 Score=40.46 Aligned_cols=195 Identities=14% Similarity=0.113 Sum_probs=112.4
Q ss_pred CCCcccccC-c--cchHHHHHHHHHHHHHH--------------------hCCCccccEEEEeCcchHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDD-I--QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 151 (388)
Q Consensus 95 ~~~~~FnDD-i--qGTa~V~lAgll~Al~~--------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~ 151 (388)
..|++.|=- . +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+ .
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l-~-- 165 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRL-Q-- 165 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHT-T--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHH-H--
Confidence 467776643 2 23455678888877762 24568999999999999999999988 2
Q ss_pred HHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHH
Q 016501 152 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 227 (388)
Q Consensus 152 ~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi 227 (388)
..|+ +++.+|+... .....+..-+ ...+|.|+++. .|+++=.-- ..++++++.+
T Consensus 166 --~~G~-------~V~~~d~~~~-------~~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 166 --GWGA-------TLQYHEAKAL-------DTQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp --TSCC-------EEEEECSSCC-------CHHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred --HCCC-------EEEEECCCCC-------cHhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 2364 6888887531 1111111111 12379999988 999885421 2368999999
Q ss_pred HHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCCCceeeCCEEecc-------ccccccccchHHHHHH
Q 016501 228 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVP-------GQANNAYIFPGFGLGL 300 (388)
Q Consensus 228 ~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf~pv~~~Gr~~~p-------~Q~NN~~iFPGlglG~ 300 (388)
+.|. +..++.=.|+-..--|-.-.+|++ .|+.-.|.=-=|++-.+ .....| -+..|+++-|=++-
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~-- 295 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAALE--RGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGS-- 295 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTT--
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHHH--hCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCC--
Confidence 9996 778998888844223333334443 45544331111111000 000112 23457888887642
Q ss_pred HHhCCcccCHHHHHHHHHHHHcccC
Q 016501 301 VISGAIRVHDDMLLAASEALAKQVT 325 (388)
Q Consensus 301 l~~~a~~Itd~m~~aAA~aLA~~v~ 325 (388)
....-.+.|...+++.|-....
T Consensus 296 ---~t~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 296 ---AVRAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHT
T ss_pred ---ChHHHHHHHHHHHHHHHHHHHc
Confidence 1122234555556666655543
No 173
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.72 E-value=0.5 Score=44.42 Aligned_cols=32 Identities=34% Similarity=0.571 Sum_probs=26.5
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|.+||..+.. .| -+++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~-----~G-------~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAA-----TG-------HTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 589999999999999999843 35 368899875
No 174
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=87.70 E-value=1.4 Score=42.56 Aligned_cols=209 Identities=13% Similarity=0.088 Sum_probs=123.0
Q ss_pred eeeccCCCchHHH-HHH---HHcCCCccccc--C--ccchHHHHHHHHHHHHHH----------------hCCCccccEE
Q 016501 76 IQFEDFANHNAFE-LLA---KYGTTHLVFND--D--IQGTASVVLAGVVAALKL----------------IGGTLAEHRF 131 (388)
Q Consensus 76 I~~EDf~~~~af~-iL~---ryr~~~~~FnD--D--iqGTa~V~lAgll~Al~~----------------~g~~L~d~ri 131 (388)
|+.--.+..|-.. +.. -.+..+++.|= - -+.+|=-+++.+|+..|- .+..|.+.+|
T Consensus 63 I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tv 142 (315)
T 3pp8_A 63 VFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSV 142 (315)
T ss_dssp EEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCE
T ss_pred EEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEE
Confidence 6665566655323 322 13347777763 2 145666788888888763 2567999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcE
Q 016501 132 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 211 (388)
Q Consensus 132 v~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptv 211 (388)
.|+|.|..|..+|+.+ .. .|+ +++.+|+..- ...... .+ ....+|.|+++. .|+
T Consensus 143 GIiG~G~IG~~vA~~l-~~----~G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDi 196 (315)
T 3pp8_A 143 GIMGAGVLGAKVAESL-QA----WGF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRV 196 (315)
T ss_dssp EEECCSHHHHHHHHHH-HT----TTC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSE
T ss_pred EEEeeCHHHHHHHHHH-HH----CCC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCE
Confidence 9999999999999998 32 364 6888887421 111110 01 112479999987 999
Q ss_pred EEEec----CCCCCCCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEeeCCCC--CceeeCCEEeccc
Q 016501 212 LIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPG 285 (388)
Q Consensus 212 lIG~S----~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~AtGspf--~pv~~~Gr~~~p~ 285 (388)
++=.- ...++|+++.++.|. +..|+.=.|+-..--|-.-.+|++ .|+.--|.=-=| +|.- .+ ..--
T Consensus 197 V~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~-~~--~pL~ 268 (315)
T 3pp8_A 197 LINLLPNTAQTVGIINSELLDQLP---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLP-QE--SPLW 268 (315)
T ss_dssp EEECCCCCGGGTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCC-TT--CGGG
T ss_pred EEEecCCchhhhhhccHHHHhhCC---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCC-CC--Chhh
Confidence 88431 123689999999886 678888888754223333334443 355433321111 1110 00 0112
Q ss_pred cccccccchHHHHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 016501 286 QANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 325 (388)
Q Consensus 286 Q~NN~~iFPGlglG~l~~~a~~Itd~m~~aAA~aLA~~v~ 325 (388)
+..|+++-|=++ ..+. .+.|...+++.|.....
T Consensus 269 ~~~nvilTPHia------~~t~-~~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 269 RHPRVAMTPHIA------AVTR-PAEAIDYISRTITQLEK 301 (315)
T ss_dssp GCTTEEECSSCS------SCCC-HHHHHHHHHHHHHHHHH
T ss_pred cCCCEEECCCCC------cccH-HHHHHHHHHHHHHHHHc
Confidence 457888888774 3332 35666666776666543
No 175
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=87.66 E-value=2.9 Score=40.73 Aligned_cols=121 Identities=12% Similarity=0.070 Sum_probs=82.0
Q ss_pred CCcccccCc---cchHHHHHHHHHHHHHH------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHHh
Q 016501 96 THLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 154 (388)
Q Consensus 96 ~~~~FnDDi---qGTa~V~lAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~ 154 (388)
.|++.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+ ..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l-~~---- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRM-QS---- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHH-HT----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHH-HH----
Confidence 577777532 23445578888888764 25679999999999999999999988 32
Q ss_pred cCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHHHH
Q 016501 155 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAM 230 (388)
Q Consensus 155 ~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~~M 230 (388)
.|+ +++.+|+.. +. ...+ .+ .-...+|.|+++. .|+++=+-- ..++++++.++.|
T Consensus 187 ~G~-------~V~~~d~~~-------~~-~~~~-~~---g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~m 245 (335)
T 2g76_A 187 FGM-------KTIGYDPII-------SP-EVSA-SF---GVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQC 245 (335)
T ss_dssp TTC-------EEEEECSSS-------CH-HHHH-HT---TCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTTS
T ss_pred CCC-------EEEEECCCc-------ch-hhhh-hc---CceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhhC
Confidence 353 588888641 10 1111 11 1112479999987 999985421 2267888888888
Q ss_pred hcCCCCcEEEecCCC
Q 016501 231 ASFNEKPLILALSNP 245 (388)
Q Consensus 231 a~~~~rPIIFaLSNP 245 (388)
. +..++.=.|.-
T Consensus 246 k---~gailIN~arg 257 (335)
T 2g76_A 246 K---KGVRVVNCARG 257 (335)
T ss_dssp C---TTEEEEECSCT
T ss_pred C---CCcEEEECCCc
Confidence 6 67788888874
No 176
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=87.60 E-value=2.2 Score=43.02 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=52.8
Q ss_pred ccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcc
Q 016501 128 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 206 (388)
Q Consensus 128 d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~ 206 (388)
--|++|+|+ |-+|.+.++.+ .. .|.. ..++..+|.+= ..++.. | +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a-~~----lGa~----~~~V~v~D~~~---~~~g~~-------~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLL-HK----VGIP----DANILKWDIKE---TSRGGP-------F-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHH-HH----TTCC----GGGEEEECHHH---HTTCSC-------C-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHH-Hh----CCCC----cCceEEeeccc---cccCCc-------h-----------hhHhh
Confidence 568999999 99999999988 33 2631 12677777641 111010 1 23554
Q ss_pred cCCcEEEEecCC----CCCCCHHHHHHHhcCCCCcEEEecC
Q 016501 207 IKPTILIGSSGV----GRTFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 207 vkptvlIG~S~~----~g~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
.|++||+--. +-++|+|+++.|.+ +--+|.=+|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m~k--~gsVIVDVA 300 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNPNR--RLRTVVDVS 300 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCTTC--CCCEEEETT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcCcC--CCeEEEEEe
Confidence 9999998664 56799999999821 333444443
No 177
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.46 E-value=0.28 Score=48.29 Aligned_cols=117 Identities=16% Similarity=0.331 Sum_probs=70.9
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc-CCCCCHHHH
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDA 203 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~-~~~~~L~ea 203 (388)
+...||.|+|| |..|..+|..++. .|+ ..++.++|.+-=..+...-+|.+. .|.... ....++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 35679999998 9999999976632 365 247999997411000000123332 231110 112578999
Q ss_pred hcccCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcE-EEecCCCCCCCCCCHHHHhcc
Q 016501 204 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 204 v~~vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPI-IFaLSNPt~~~E~tpe~A~~~ 259 (388)
+++ +|++|=+.+.+ |- .-+++++.+.++++.-+ |+-.|||. .....-+++.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv---d~~t~i~~k~ 139 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA---DITGLVTLIY 139 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH---HHHHHHHHHH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch---HHHHHHHHHH
Confidence 998 99988444332 21 23567788888998885 88899996 4444445444
No 178
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.44 E-value=1.6 Score=44.80 Aligned_cols=98 Identities=12% Similarity=0.169 Sum_probs=59.0
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh-hhc-cccCCCCCHHHHhcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~-~~a-~~~~~~~~L~eav~~ 206 (388)
.||.|+|+|..|.++|..|.. .|. +++++|+.- +.+..... ... ..-....|+.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~-----~G~-------~V~v~dr~~-------~~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAAD-----HGF-------TVCAYNRTQ-------SKVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS-------HHHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHH-----CCC-------EEEEEeCCH-------HHHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 479999999999999999943 363 578887641 11111111 000 001123578887765
Q ss_pred c-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 207 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 207 v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
. ++|++| ++...+...+++++.+..+. +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 377776 44444446777777776544 346777788754
No 179
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.38 E-value=0.28 Score=48.11 Aligned_cols=119 Identities=18% Similarity=0.232 Sum_probs=73.3
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc--CCCCCHHH
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 202 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~--~~~~~L~e 202 (388)
+....||.|+|||..|.++|..|+. .|+ ...+.|+|.+-=..+.-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~-----~~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILM-----KDL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHh-----CCC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 3456799999999999999988843 254 257999997410000000123322 1233211 1123454
Q ss_pred HhcccCCcEEEEecCCC---C-----C------CCHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhccc
Q 016501 203 AVKVIKPTILIGSSGVG---R-----T------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS 260 (388)
Q Consensus 203 av~~vkptvlIG~S~~~---g-----~------ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t 260 (388)
++++ +|++|=+.+.+ | + +-+++.+.|.++++.-+|+-.|||. .+..+-+++.+
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---di~t~~~~k~s 150 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV---DILTYVAWKIS 150 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH---HHHHHHHHHHh
Confidence 5877 99987444433 2 1 2257888899999999999999997 45555565554
No 180
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=87.37 E-value=4.4 Score=40.52 Aligned_cols=124 Identities=10% Similarity=0.019 Sum_probs=81.9
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH--------------------hCCCccccEEEEeCcchHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 151 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~--------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~ 151 (388)
..|.+.|=-- +.+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+ ..
T Consensus 135 ~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l-~a- 212 (393)
T 2nac_A 135 RNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRL-AP- 212 (393)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHH-GG-
T ss_pred CCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHH-Hh-
Confidence 3566666322 33455578888888762 25679999999999999999999988 22
Q ss_pred HHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHH
Q 016501 152 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 227 (388)
Q Consensus 152 ~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi 227 (388)
.|+ +++.+|+.. ......+ .+- .....+|.|+++. .|+++=.- ...++|+++.+
T Consensus 213 ---~G~-------~V~~~d~~~-------~~~~~~~-~~G--~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 270 (393)
T 2nac_A 213 ---FDV-------HLHYTDRHR-------LPESVEK-ELN--LTWHATREDMYPV--CDVVTLNCPLHPETEHMINDETL 270 (393)
T ss_dssp ---GTC-------EEEEECSSC-------CCHHHHH-HHT--CEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ---CCC-------EEEEEcCCc-------cchhhHh-hcC--ceecCCHHHHHhc--CCEEEEecCCchHHHHHhhHHHH
Confidence 363 588787631 1111111 110 0112479999987 99988542 12378899999
Q ss_pred HHHhcCCCCcEEEecCCC
Q 016501 228 EAMASFNEKPLILALSNP 245 (388)
Q Consensus 228 ~~Ma~~~~rPIIFaLSNP 245 (388)
+.|. +..++.=.|.-
T Consensus 271 ~~mk---~gailIN~aRG 285 (393)
T 2nac_A 271 KLFK---RGAYIVNTARG 285 (393)
T ss_dssp TTSC---TTEEEEECSCG
T ss_pred hhCC---CCCEEEECCCc
Confidence 9886 67788888863
No 181
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=87.30 E-value=1.8 Score=41.19 Aligned_cols=101 Identities=10% Similarity=0.138 Sum_probs=60.9
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 206 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~ 206 (388)
+..||.|+|+|..|.++|..|.. .|.. ...+++++|+.- ++ +.+...++ + .-....+..++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~-----~G~~---~~~~V~v~~r~~----~~-~~~~~l~~-~--G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTA-----AGVL---AAHKIMASSPDM----DL-ATVSALRK-M--GVKLTPHNKETVQH 84 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHH-----TTSS---CGGGEEEECSCT----TS-HHHHHHHH-H--TCEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCCC---CcceEEEECCCc----cH-HHHHHHHH-c--CCEEeCChHHHhcc
Confidence 34689999999999999998843 3531 124688888641 10 01111111 0 00112467788876
Q ss_pred cCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 207 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 207 vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
+|++| ++.. .-..+++++.+.... +..+|.-+||..+
T Consensus 85 --aDvVi-lav~-~~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVK-PHIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSC-GGGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeC-HHHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 88777 4433 346777888776543 4568888888874
No 182
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.27 E-value=1.9 Score=40.76 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=55.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc---cc-------c--CC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HE-------H--EP 196 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a---~~-------~--~~ 196 (388)
.||.|+|+|..|..+|..|.. .| .+++++|++.= .+...++... .. . ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-----~g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-----KG-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 589999999999999998832 35 35888887421 1111111100 00 0 11
Q ss_pred CCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCC
Q 016501 197 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 244 (388)
Q Consensus 197 ~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSN 244 (388)
..++.++++. +|++|=+. .. -..+++++.+..+. +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v-~~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVV-PA-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECS-CG-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeC-Cc-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 3578888875 88877333 22 34588888887543 3556666655
No 183
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.11 E-value=0.83 Score=43.28 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=28.1
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+...||.|+|.|..|.++|..|.. .|. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLK-----QGK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 4556799999999999999999843 353 57777764
No 184
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.08 E-value=0.38 Score=42.39 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=59.3
Q ss_pred EEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhh---cc-ccCCCCCHHHHh
Q 016501 130 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW---AH-EHEPVNNLLDAV 204 (388)
Q Consensus 130 riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~---a~-~~~~~~~L~eav 204 (388)
||.|+| +|..|..+++.|. +.| .+++++|++- +.....++.+ .. ..-...++.+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~-----~~g-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLA-----TLG-------HEIVVGSRRE-------EKAEAKAAEYRRIAGDASITGMKNEDAA 62 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHH-----TTT-------CEEEEEESSH-------HHHHHHHHHHHHHHSSCCEEEEEHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHH-----HCC-------CEEEEEeCCH-------HHHHHHHHHhccccccCCCChhhHHHHH
Confidence 799999 9999999999883 235 3688888741 1111111111 11 000124788888
Q ss_pred cccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 205 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
+. +|++|=+.. + -..+++++.+....+..+|.-++|+.+
T Consensus 63 ~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 63 EA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred hc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 87 899984432 2 235677776654334679999999774
No 185
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.01 E-value=0.68 Score=41.62 Aligned_cols=93 Identities=14% Similarity=0.175 Sum_probs=55.7
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 206 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~ 206 (388)
...||.|+|+|..|..+|+.|.. .|. +++++|++- +... .+.+..-...++.+++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~-------~~~~----~~~~~g~~~~~~~~~~~~ 83 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP-------KRTA----RLFPSAAQVTFQEEAVSS 83 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH-------HHHH----HHSBTTSEEEEHHHHTTS
T ss_pred CCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH-------HHHH----HHHHcCCceecHHHHHhC
Confidence 45689999999999999998832 352 588888641 1111 111111001268888876
Q ss_pred cCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCC
Q 016501 207 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 247 (388)
Q Consensus 207 vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~ 247 (388)
+|++|=+ ..+. ..+++++ ++...+.-+|.-+||+.+
T Consensus 84 --~DvVi~a-v~~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 84 --PEVIFVA-VFRE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp --CSEEEEC-SCGG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred --CCEEEEC-CChH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 8988843 3332 3445543 332235678999999873
No 186
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.90 E-value=1.1 Score=41.77 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=25.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|.++|..|.. .| .+++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~-----~G-------~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLK-----AG-------YLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 589999999999999999843 35 368888874
No 187
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.66 E-value=1.1 Score=42.59 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=27.0
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..||.|+|+|..|.++|..|.. .|. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~-----~G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE-----AGY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----CCC-------eEEEEcCC
Confidence 55799999999999999999843 353 57877764
No 188
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=86.57 E-value=5.9 Score=38.32 Aligned_cols=123 Identities=17% Similarity=0.148 Sum_probs=84.5
Q ss_pred cCCCcccccCccc---hHHHHHHHHHHHHHH------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHH
Q 016501 94 GTTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 152 (388)
Q Consensus 94 r~~~~~FnDDiqG---Ta~V~lAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~ 152 (388)
+..|++.|=---. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+. .
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~-~-- 167 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIME-G-- 167 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHH-H--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHH-H--
Confidence 3567777753333 444588889888772 245789999999999999999999983 3
Q ss_pred HhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHH
Q 016501 153 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 228 (388)
Q Consensus 153 ~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~ 228 (388)
.|+ +++.+|+.. . +.+ ..+++ ...+|.|+++. .|+++=+-. ..++++++.++
T Consensus 168 --~G~-------~V~~~d~~~-----~-~~~----~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 168 --FGA-------KVITYDIFR-----N-PEL----EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp --TTC-------EEEEECSSC-----C-HHH----HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred --CCC-------EEEEECCCc-----c-hhH----HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 364 688888742 1 111 11222 12379999987 999885421 22678899999
Q ss_pred HHhcCCCCcEEEecCCCC
Q 016501 229 AMASFNEKPLILALSNPT 246 (388)
Q Consensus 229 ~Ma~~~~rPIIFaLSNPt 246 (388)
.|. +..++.-.|.-.
T Consensus 224 ~mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGP 238 (333)
T ss_dssp HSC---TTEEEEECSCGG
T ss_pred hCC---CCcEEEECCCCc
Confidence 996 677888888744
No 189
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=86.47 E-value=4.5 Score=39.21 Aligned_cols=121 Identities=17% Similarity=0.145 Sum_probs=84.1
Q ss_pred CCCcccccCccc---hHHHHHHHHHHHHHH-------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 152 (388)
Q Consensus 95 ~~~~~FnDDiqG---Ta~V~lAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~ 152 (388)
..|.+.|=--.. +|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+ ..
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l-~~-- 166 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLF-KG-- 166 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHH-HH--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHH-HH--
Confidence 567777753333 444578888887651 34679999999999999999999998 33
Q ss_pred HhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHHHHH
Q 016501 153 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 228 (388)
Q Consensus 153 ~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~evi~ 228 (388)
.|+ +++.+|+.. + .... .++. ..+|.|+++. .|+++=+-- ..++|+++.++
T Consensus 167 --~G~-------~V~~~d~~~----~--~~~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 167 --FGA-------KVIAYDPYP----M--KGDH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp --TTC-------EEEEECSSC----C--SSCC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred --CCC-------EEEEECCCc----c--hhhH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 364 588888753 1 1111 1121 2379999987 999985421 22679999999
Q ss_pred HHhcCCCCcEEEecCCCC
Q 016501 229 AMASFNEKPLILALSNPT 246 (388)
Q Consensus 229 ~Ma~~~~rPIIFaLSNPt 246 (388)
.|. +..++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 997 677888887744
No 190
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.35 E-value=0.87 Score=44.21 Aligned_cols=108 Identities=8% Similarity=0.117 Sum_probs=61.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh-----hhccc------cCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEPV 197 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~-----~~a~~------~~~~ 197 (388)
.||.|+|+|..|.++|..|... |.....-..+++++|+..-+. .+ ......++ .|-.. -...
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~-----G~~~~~~~~~V~~~~r~~~~~-~~-~~~~~l~~~~~~~~~~~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN-----AKNNYLFENEVRMWIRDEFVN-GE-RMVDIINNKHENTKYLKGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH-----HHHCTTBCSCEEEECCSCC----C-CHHHHHHHHCBCTTTSTTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CCccCCCCCeEEEEECChhhh-hH-HHHHHHHhcCcccccCCcccCcCCeEEE
Confidence 4899999999999999999543 310000004688888753211 01 01111111 01000 0112
Q ss_pred CCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhc----CC-CCcEEEecCCCCC
Q 016501 198 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----FN-EKPLILALSNPTS 247 (388)
Q Consensus 198 ~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~----~~-~rPIIFaLSNPt~ 247 (388)
.++.|+++. +|++| ++.. .-..+++++.+.. +. +..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav~-~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIVP-CQYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECCC-HHHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcCC-HHHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 468888886 88777 3332 2467888888875 33 4668889998653
No 191
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=85.90 E-value=0.68 Score=44.57 Aligned_cols=35 Identities=20% Similarity=0.485 Sum_probs=26.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..||||+|+|.||+.+|..|.. .|- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~-----~~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKL-----ADP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HCT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHh-----cCc-----CCeEEEEeCC
Confidence 4589999999999999999832 232 1368899875
No 192
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.74 E-value=1.4 Score=44.83 Aligned_cols=97 Identities=16% Similarity=0.156 Sum_probs=59.5
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc-----cccCCCCCHHHHh
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 204 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a-----~~~~~~~~L~eav 204 (388)
||.|+|+|..|..+|..|.. .|. +++++|+..= ......+.+- ..-....++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~~-------~~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE-----KGF-------KVAVFNRTYS-------KSEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSHH-------HHHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHH-----CCC-------EEEEEeCCHH-------HHHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 79999999999999999832 363 5888887411 1111111100 0011235788888
Q ss_pred ccc-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 205 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 205 ~~v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
+.. ++|++| ++...+...+++++.+..+. +.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 743 488887 44444445677887776433 456888888865
No 193
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=85.54 E-value=0.63 Score=45.59 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=60.3
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccC---CC-----CCccHhhhhhcc----
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RK-----DSLQHFKKPWAH---- 192 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~---r~-----~~l~~~k~~~a~---- 192 (388)
+|++.||+++|+|..|..||+.|+.. |+ ++|.++|.+= |..+ |+ +++-..|..-+.
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d~-V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~ 100 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHEQ-VTPEDPGAQFLIRTGSVGRNRAEASLERAQ 100 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB-CCSSCGGGCTTSCSSCTTSBHHHHHHHHHH
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECCC-cchhhCCCCCccccccCcCCHHHHHHHHHH
Confidence 57889999999999999999999543 76 7999999763 2221 10 111111211111
Q ss_pred c-cCC---------C-CCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEe
Q 016501 193 E-HEP---------V-NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 241 (388)
Q Consensus 193 ~-~~~---------~-~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFa 241 (388)
+ .+. . ....+.+++ .|++|.+... .=++..|...+.....|.|.+
T Consensus 101 ~lnp~v~v~~~~~~~~~~~~~~~~~--~dvVv~~~d~--~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 101 NLNPMVDVKVDTEDIEKKPESFFTQ--FDAVCLTCCS--RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HTCTTSEEEEECSCGGGCCHHHHTT--CSEEEEESCC--HHHHHHHHHHHHHTTCEEEEE
T ss_pred hHCCCeEEEEEecccCcchHHHhcC--CCEEEEcCCC--HHHHHHHHHHHHHcCCCEEEE
Confidence 0 011 0 123556665 7888876532 234555666666667888865
No 194
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=85.53 E-value=0.4 Score=46.87 Aligned_cols=120 Identities=17% Similarity=0.138 Sum_probs=75.3
Q ss_pred cEEEEeC-cchHHHHHHHHHHHHHHHhcCC-ChhhhcCcEEEEcCCC---ccccCCCCCccHhhhhhccccCCCCCHHHH
Q 016501 129 HRFLFLG-AGEAGTGIAELIALEISKQTKA-PVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 203 (388)
Q Consensus 129 ~riv~~G-AGsAg~giA~ll~~~~~~~~G~-s~~eA~~~i~l~D~~G---lv~~~r~~~l~~~k~~~a~~~~~~~~L~ea 203 (388)
.||+|.| ||..|..+|.+|+. .|+ ++.+ .-.+.|+|... .+.... -+|.+.-.+|.++.....++.++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~-~~~l~L~Di~~~~~~~~g~a-~DL~~~~~~~~~~~~~~~~~~~~ 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQ-PIILVLLDITPMMGVLDGVL-MELQDCALPLLKDVIATDKEEIA 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTC-CEEEEEECCGGGHHHHHHHH-HHHHHTCCTTEEEEEEESCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccC-CCEEEEEeCCCccccchhhH-hhhHhhhhcccCCEEEcCCcHHH
Confidence 5899999 79999999988832 344 1111 11399999853 211111 23443323443322223578999
Q ss_pred hcccCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcE-EEecCCCCCCCCCCHHHHhccc
Q 016501 204 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTWS 260 (388)
Q Consensus 204 v~~vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPI-IFaLSNPt~~~E~tpe~A~~~t 260 (388)
+++ .|++|=+.+.+ |- ..+++++.+.+++.+-+ |+-.|||. .+...-+.+.+
T Consensus 77 ~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~~ 143 (333)
T 5mdh_A 77 FKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKSA 143 (333)
T ss_dssp TTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTC
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHHc
Confidence 998 99988554433 11 34678889999988874 99999996 56666665544
No 195
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=85.49 E-value=0.39 Score=46.70 Aligned_cols=90 Identities=21% Similarity=0.286 Sum_probs=55.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc----cCCCCCHHHHh
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNLLDAV 204 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~----~~~~~~L~eav 204 (388)
.||+++|||-.|-.+|+.|.. ..++.+.|+.. +.+...+ +++.. ..+..+|.+.+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 479999999999888887721 23577777631 1222221 22221 12235688999
Q ss_pred cccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 205 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
++ .|++|-+ .|.-+...+++.-.+.. .. ++=+|--
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g-~~-yvD~s~~ 110 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSK-VD-MVDVSFM 110 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHT-CE-EEECCCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcC-cc-eEeeecc
Confidence 87 8998854 45567888888766533 33 5556643
No 196
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=85.49 E-value=6.8 Score=38.06 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=81.6
Q ss_pred CCCcccccCccc---hHHHHHHHHHHHHHH-------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 152 (388)
Q Consensus 95 ~~~~~FnDDiqG---Ta~V~lAgll~Al~~-------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~ 152 (388)
..|.+.|-.--. +|=-+++.+++..|- .|..|.+.++.|+|.|.-|..+|+.+ ..+
T Consensus 86 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~-~~f- 163 (334)
T 3kb6_A 86 KGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYG-LAF- 163 (334)
T ss_dssp HTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHH-HHT-
T ss_pred CCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhh-ccc-
Confidence 367777754333 444567777776542 24678999999999999999999998 443
Q ss_pred HhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHHH
Q 016501 153 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 228 (388)
Q Consensus 153 ~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi~ 228 (388)
|+ +++.+|+. .+ +....... ...+|.|.++. .|+++=.- .--++|+++.++
T Consensus 164 ---g~-------~v~~~d~~-----~~----~~~~~~~~----~~~~l~ell~~--sDivslh~Plt~~T~~li~~~~l~ 218 (334)
T 3kb6_A 164 ---GM-------KVLCYDVV-----KR----EDLKEKGC----VYTSLDELLKE--SDVISLHVPYTKETHHMINEERIS 218 (334)
T ss_dssp ---TC-------EEEEECSS-----CC----HHHHHTTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred ---Cc-------eeeecCCc-----cc----hhhhhcCc----eecCHHHHHhh--CCEEEEcCCCChhhccCcCHHHHh
Confidence 64 57777753 11 11111111 13579999988 99987431 123799999999
Q ss_pred HHhcCCCCcEEEecCCC
Q 016501 229 AMASFNEKPLILALSNP 245 (388)
Q Consensus 229 ~Ma~~~~rPIIFaLSNP 245 (388)
.|. +..++.=.|+=
T Consensus 219 ~mk---~~a~lIN~aRG 232 (334)
T 3kb6_A 219 LMK---DGVYLINTARG 232 (334)
T ss_dssp HSC---TTEEEEECSCG
T ss_pred hcC---CCeEEEecCcc
Confidence 997 67777766653
No 197
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.45 E-value=1.1 Score=41.69 Aligned_cols=32 Identities=19% Similarity=0.408 Sum_probs=25.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|.++|..|.. .| .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~-----~G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK-----AG-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHH-----CC-------CeEEEEcCC
Confidence 589999999999999999843 35 367778874
No 198
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.27 E-value=2.1 Score=36.36 Aligned_cols=96 Identities=11% Similarity=0.096 Sum_probs=53.7
Q ss_pred ccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhc
Q 016501 128 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 205 (388)
Q Consensus 128 d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~ 205 (388)
..||+|.|| |--|..+++.|.. .| .+++.++++.- +...+......+.. +-.+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8888888888832 35 46888887521 10111011111111 1122246888888
Q ss_pred ccCCcEEEEecCCCCC---------CCHHHHHHHhcCCCCcEEEe
Q 016501 206 VIKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILA 241 (388)
Q Consensus 206 ~vkptvlIG~S~~~g~---------ft~evi~~Ma~~~~rPIIFa 241 (388)
. +|++|=+.+.... .+..+++.|.+..-+.|||.
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~ 109 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEE
Confidence 6 8999977764321 13455555554333444543
No 199
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.22 E-value=2.2 Score=43.27 Aligned_cols=99 Identities=12% Similarity=0.127 Sum_probs=61.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 206 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~ 206 (388)
..||.|+|+|..|..+|..|.. .|. +++++|+.- +.+....+.+.. .-....++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~-----~G~-------~V~v~dr~~-------~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES-----RGY-------TVAIYNRTT-------SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSH-------HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHh-----CCC-------EEEEEcCCH-------HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 3689999999999999999842 363 577787631 112222221100 00123578888864
Q ss_pred c-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 207 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 207 v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
. ++|++| ++...+...+++++.+.... +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478877 44444456777887776544 456788888865
No 200
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=84.95 E-value=1.4 Score=43.75 Aligned_cols=96 Identities=19% Similarity=0.282 Sum_probs=55.2
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-----------ccCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 197 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-----------~~~~~ 197 (388)
.||+|+|||..|..+++.|. +.|- ...+++++|++- +.+......+.. +-.+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~-----~~g~----~~~~V~v~~r~~-------~~~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMA-----MNRE----VFSHITLASRTL-------SKCQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----TCTT----TCCEEEEEESCH-------HHHHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHH-----hCCC----CceEEEEEECCH-------HHHHHHHHHhhhhcCCceEEEEecCCCH
Confidence 38999999988888887773 2231 014788888741 122222222211 01122
Q ss_pred CCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC
Q 016501 198 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 198 ~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
.++.++++..++|++|=+++. .+..++++...+. ...+| =+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~-g~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRT-GVPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHH-TCCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHh-CCCEE-EecC
Confidence 468889998899999977643 2355666655433 34444 2555
No 201
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=84.88 E-value=2.1 Score=43.49 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=59.5
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh-hhc-cccCCCCCHHHHhcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~-~~a-~~~~~~~~L~eav~~ 206 (388)
.||.|+|+|..|..+|..|.. .|. +++++|+.. +.+....+ ... ..-....++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-----~G~-------~V~v~dr~~-------~~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-----HGF-------VVCAFNRTV-------SKVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHH-----CCC-------eEEEEeCCH-------HHHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 479999999999999998842 363 588888641 11111111 000 000113578888752
Q ss_pred c-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 207 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 207 v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
+ ++|++| ++...+...+++++.+..+. +.-||.-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 1 388877 44444446777887776543 356888888865
No 202
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=84.86 E-value=1.4 Score=41.37 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=25.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998832 353 58888864
No 203
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=84.84 E-value=2.3 Score=41.46 Aligned_cols=91 Identities=22% Similarity=0.363 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHhCCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh
Q 016501 108 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 186 (388)
Q Consensus 108 a~V~lAgll~Al~~~g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~ 186 (388)
.-+|-.|++--|+-.+.+|+..++|++|.+. -|.-+|-||.. .|. .+.+|.++
T Consensus 159 ~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~-------------- 212 (303)
T 4b4u_A 159 GSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR-------------- 212 (303)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT--------------
T ss_pred cCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC--------------
Confidence 3467789999999999999999999999654 57888877732 342 46665442
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEec
Q 016501 187 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 242 (388)
Q Consensus 187 k~~~a~~~~~~~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaL 242 (388)
..+|.+.+++ +|++|...+.++.++.|||| +.-+|.=.
T Consensus 213 ----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk------~GavVIDV 250 (303)
T 4b4u_A 213 ----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK------QGAVVVDA 250 (303)
T ss_dssp ----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC------TTCEEEEC
T ss_pred ----------CCCHHHHhhc--CCeEEeccCCCCcccccccc------CCCEEEEe
Confidence 1357788887 99999999999999999998 44455533
No 204
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=84.75 E-value=1.4 Score=43.01 Aligned_cols=41 Identities=17% Similarity=0.274 Sum_probs=30.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 179 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r 179 (388)
.+|||+|||.||+..|..|. +.|.+ .+|.++|+..-..-+|
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~-----~~g~~-----~~V~li~~~~~~~y~~ 43 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALR-----AEGFE-----GRISLIGDEPHLPYDR 43 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----HTTCC-----SEEEEEECSSSSSBCS
T ss_pred CCEEEEcccHHHHHHHHHHH-----ccCcC-----CeEEEEECCCCCCcCC
Confidence 48999999999999999883 34642 4699999875544444
No 205
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=84.71 E-value=0.85 Score=43.08 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=25.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||+|+|||.||+..|..|. +.|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~-----~~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLR-----KHGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----HTTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHH-----hCCC-------CEEEEecC
Confidence 58999999999999998883 3575 47777764
No 206
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=84.69 E-value=2.6 Score=38.68 Aligned_cols=96 Identities=15% Similarity=0.155 Sum_probs=57.3
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhc-cc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK-VI 207 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~-~v 207 (388)
.||.|+|+|..|..+|..|.. .|.. .+|+++|++. +.+...++.-.. .....++.++++ .
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~~- 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS- 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHHHTTSC-SEEESCGGGGGGTC-
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHHHCCCc-ccccCCHHHHhcCC-
Confidence 379999999999999998832 3531 3688888741 111111110000 001246778887 5
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHhcC-CCCcEEEecCCCC
Q 016501 208 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 246 (388)
Q Consensus 208 kptvlIG~S~~~g~ft~evi~~Ma~~-~~rPIIFaLSNPt 246 (388)
+|++| ++..+ -.++++++.+..+ .+..||.-+||-.
T Consensus 63 -aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 -PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp -CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred -CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88888 44332 3566777776543 3556777778754
No 207
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=84.57 E-value=3.9 Score=38.78 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..||.|+|+|..|.++|..|... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 36899999999999999999432 52 478888884
No 208
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=84.56 E-value=6 Score=38.59 Aligned_cols=93 Identities=20% Similarity=0.375 Sum_probs=50.5
Q ss_pred HHHHHHHhC-CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc
Q 016501 115 VVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 193 (388)
Q Consensus 115 ll~Al~~~g-~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~ 193 (388)
-+.++.... .--..++|+|+|||+.|...+.+. +..|. ++|+.+|+. +.+..++++
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqla-----k~~Ga------~~Vi~~~~~------------~~~~~~~~~ 256 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL-----KHAGA------SKVILSEPS------------EVRRNLAKE 256 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHH-----HHTTC------SEEEEECSC------------HHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHH-----HHcCC------CEEEEECCC------------HHHHHHHHH
Confidence 344443333 334678999999998777665555 33473 578877753 222333332
Q ss_pred -------cCCCCCHHHHhcc----cCCcEEEEecCCCCCCCHHHHHHH
Q 016501 194 -------HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAM 230 (388)
Q Consensus 194 -------~~~~~~L~eav~~----vkptvlIG~S~~~g~ft~evi~~M 230 (388)
.....++.+.++. -+.|++|-+++......+..++.+
T Consensus 257 lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 0112345555543 368999987764211333444444
No 209
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=84.35 E-value=0.66 Score=47.09 Aligned_cols=38 Identities=26% Similarity=0.414 Sum_probs=32.5
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.|++.||+++|+|..|..+|+.|+. .|+ ++|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~-----aGv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLAL-----SGF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHH-----TTC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEcCC
Confidence 34688999999999999999999953 476 699999976
No 210
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=84.22 E-value=2.8 Score=40.50 Aligned_cols=103 Identities=23% Similarity=0.316 Sum_probs=65.8
Q ss_pred EEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCC--CCCHHHHhcc
Q 016501 130 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 206 (388)
Q Consensus 130 riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~--~~~L~eav~~ 206 (388)
||.|+| +|.-|..+|.+|.. +.++ ...+.|+|..-. ..+..-+|.+. ++-..-.. ..+..+++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~----~~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKT----QLPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----HSCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHh----CCCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 899999 89999999988832 2243 268999999741 11110122221 11000010 1357888988
Q ss_pred cCCcEEEEecCCC---CC-----------CCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 207 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 207 vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+|++|=+.+.+ |- +-+++++.+.++++.-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99988665543 21 2256778888899999999999997
No 211
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.08 E-value=3.9 Score=39.06 Aligned_cols=94 Identities=16% Similarity=0.166 Sum_probs=55.3
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHH-Hhcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKV 206 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~e-av~~ 206 (388)
-.||.|+|+|..|..+|..|.. .|. ..+|+++|++- +.+...++.-+. .....++.+ +++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~-----~G~-----~~~V~~~dr~~-------~~~~~a~~~G~~-~~~~~~~~~~~~~~ 94 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR-----SGF-----KGKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS 94 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCH-------HHHHHHHHTTSC-SEEESCTTGGGGGC
T ss_pred CCEEEEEeeCHHHHHHHHHHHh-----CCC-----CCEEEEEECCH-------HHHHHHHHCCCc-chhcCCHHHHhhcc
Confidence 3799999999999999998832 464 24788888741 111111110000 011246677 7776
Q ss_pred cCCcEEEEecCCCCCCCHHHHHHHhcC-CCCcEEEecC
Q 016501 207 IKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 243 (388)
Q Consensus 207 vkptvlIG~S~~~g~ft~evi~~Ma~~-~~rPIIFaLS 243 (388)
+|++| ++.... -.+++++.+..+ .+.-||.-.+
T Consensus 95 --aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 --PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred --CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 88877 554433 356777776653 3455665544
No 212
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=83.93 E-value=1.9 Score=40.77 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=28.2
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+.+-.||.|+|+|..|.++|..|.. .| -+++++|++
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~-----~G-------~~V~~~dr~ 53 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLK-----NG-------FKVTVWNRT 53 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred ccccCCEEEEECccHHHHHHHHHHHH-----CC-------CeEEEEeCC
Confidence 34455799999999999999999943 35 368888874
No 213
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=83.84 E-value=2.7 Score=43.16 Aligned_cols=99 Identities=14% Similarity=0.176 Sum_probs=62.3
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc--CCCCCHHHHhc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 205 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~--~~~~~L~eav~ 205 (388)
..||.|+|.|..|.++|..|.. .|. +++++|++- +......+.-+... ....|+.|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~-----~G~-------~V~v~dr~~-------~~~~~l~~~g~~g~~i~~~~s~~e~v~ 64 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND-----HGF-------VVCAFNRTV-------SKVDDFLANEAKGTKVVGAQSLKEMVS 64 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHH-----CCC-------EEEEEeCCH-------HHHHHHHhcccCCCceeccCCHHHHHh
Confidence 3589999999999999999843 363 588888641 11222211111110 11367888887
Q ss_pred cc-CCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 206 VI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 206 ~v-kptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
.+ +||++| ++...+...+++++.+..+- +..||.-.||-.
T Consensus 65 ~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 65 KLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp TBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 43 488777 44444456777888777543 567888888855
No 214
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=83.76 E-value=1.5 Score=40.22 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=24.0
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
||.|+|+|..|..+|..|. + |. +++++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-----~-g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-----R-RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-----T-TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHh-----C-CC-------eEEEEeCC
Confidence 7999999999999998882 3 53 57888764
No 215
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=83.72 E-value=1 Score=42.19 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=28.7
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..+|+|+|||.||+..|..|.. .|. .++.++|++.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 35689999999999999999832 353 2799999874
No 216
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.62 E-value=1.8 Score=40.03 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=25.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999998832 352 58888764
No 217
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=83.59 E-value=11 Score=36.90 Aligned_cols=190 Identities=15% Similarity=0.138 Sum_probs=111.9
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHHh------------------------C-CCccccEEEEeCcchHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKLI------------------------G-GTLAEHRFLFLGAGEAGTGIAEL 146 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~~------------------------g-~~L~d~riv~~GAGsAg~giA~l 146 (388)
..|.+.|=.- +.+|=-+++.+|+..|-. | ..|.+.+|.|+|.|..|..+|+.
T Consensus 107 ~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~ 186 (347)
T 1mx3_A 107 LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALR 186 (347)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHH
Confidence 4576666432 345556888899887721 1 47899999999999999999999
Q ss_pred HHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCC
Q 016501 147 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTF 222 (388)
Q Consensus 147 l~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~f 222 (388)
+. . .|+ +|+.+|++- . +... ..+- .....+|.|+++. .|+++=.- ...+++
T Consensus 187 l~-~----~G~-------~V~~~d~~~----~--~~~~---~~~g--~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 187 AK-A----FGF-------NVLFYDPYL----S--DGVE---RALG--LQRVSTLQDLLFH--SDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp HH-T----TTC-------EEEEECTTS----C--TTHH---HHHT--CEECSSHHHHHHH--CSEEEECCCCCTTCTTSB
T ss_pred HH-H----CCC-------EEEEECCCc----c--hhhH---hhcC--CeecCCHHHHHhc--CCEEEEcCCCCHHHHHHh
Confidence 83 2 364 588888641 1 1111 1110 0112479999987 99887532 123678
Q ss_pred CHHHHHHHhcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----eCCCCCceeeCCEEeccccccccccchHHH
Q 016501 223 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFG 297 (388)
Q Consensus 223 t~evi~~Ma~~~~rPIIFaLSNPt~~~E~tpe~A~~~t~Grai~A-----tGspf~pv~~~Gr~~~p~Q~NN~~iFPGlg 297 (388)
+++.++.|. +..++.=.|+=..--|-.-.+|++ +|+.--| ..-|+++ .+. .--..+|+++-|=++
T Consensus 242 ~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~~~--~L~~~~nvi~tPHia 311 (347)
T 1mx3_A 242 NDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---SQG--PLKDAPNLICTPHAA 311 (347)
T ss_dssp SHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---TSS--TTTTCSSEEECSSCT
T ss_pred HHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---CCc--hHHhCCCEEEEchHH
Confidence 899888886 677888888754223333334443 3543322 2223210 111 012478999999775
Q ss_pred HHHHHhCCcccCHHHHHHHHHHHHccc
Q 016501 298 LGLVISGAIRVHDDMLLAASEALAKQV 324 (388)
Q Consensus 298 lG~l~~~a~~Itd~m~~aAA~aLA~~v 324 (388)
- -+....+.|...+++.+....
T Consensus 312 ~-----~t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 312 W-----YSEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp T-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHH
Confidence 2 222233445555555555544
No 218
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=83.56 E-value=1.5 Score=40.66 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=25.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|.++|..|... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999999432 5 358888874
No 219
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.31 E-value=2.2 Score=39.27 Aligned_cols=30 Identities=20% Similarity=0.346 Sum_probs=23.9
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 170 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D 170 (388)
.||.|+|+|..|..+|..|.. .| .+++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-----~g-------~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR-----AG-------HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH-----TT-------CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHh-----CC-------CEEEEEc
Confidence 489999999999999998832 35 2577777
No 220
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=83.23 E-value=1.2 Score=47.53 Aligned_cols=38 Identities=29% Similarity=0.408 Sum_probs=32.9
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|++.||+++|+|+.|.-+|+.|+.. |+ ++|.++|.+=
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D~ 51 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLDT 51 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECCB
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCCE
Confidence 57899999999999999999999543 76 6999999873
No 221
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=83.23 E-value=8.3 Score=37.03 Aligned_cols=122 Identities=16% Similarity=0.170 Sum_probs=81.3
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH---------------------hCCCccccEEEEeCcchHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 150 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~---------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~ 150 (388)
..|.+.|--- +.+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+. .
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~-~ 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQ-G 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHH-T
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHH-H
Confidence 4677777643 33444578888888763 245789999999999999999999883 2
Q ss_pred HHHhcCCChhhhcCcEEEEcC-CCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEecC----CCCCCCHH
Q 016501 151 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 225 (388)
Q Consensus 151 ~~~~~G~s~~eA~~~i~l~D~-~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S~----~~g~ft~e 225 (388)
.|+ +++.+|+ .. +. ...+..-+ ....+|.|+++. .|+++=+-- ..++++++
T Consensus 168 ----~G~-------~V~~~d~~~~-------~~-~~~~~~g~---~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FDM-------DIDYFDTHRA-------SS-SDEASYQA---TFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TTC-------EEEEECSSCC-------CH-HHHHHHTC---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CCC-------EEEEECCCCc-------Ch-hhhhhcCc---EEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 353 6888887 41 11 11111001 112379999987 998874421 23678888
Q ss_pred HHHHHhcCCCCcEEEecCC
Q 016501 226 VIEAMASFNEKPLILALSN 244 (388)
Q Consensus 226 vi~~Ma~~~~rPIIFaLSN 244 (388)
.++.|. +.-++.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888886 6678887877
No 222
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.21 E-value=2.1 Score=37.85 Aligned_cols=98 Identities=12% Similarity=0.100 Sum_probs=55.7
Q ss_pred CCccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh----hhccccCCCC
Q 016501 124 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----PWAHEHEPVN 198 (388)
Q Consensus 124 ~~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~----~~a~~~~~~~ 198 (388)
.+|++.||+|.|| |--|..+++.|.. .| .++++++++. +.+...+. .+.+-+-. .
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~-------~~~~~~~~~~~~~~~~~Dl~-~ 76 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE-------EQGPELRERGASDIVVANLE-E 76 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG-------GGHHHHHHTTCSEEEECCTT-S
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh-------HHHHHHHhCCCceEEEcccH-H
Confidence 4578899999998 8889999988843 35 3688888742 11222111 12211111 5
Q ss_pred CHHHHhcccCCcEEEEecCCCCC------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 199 NLLDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 199 ~L~eav~~vkptvlIG~S~~~g~------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
++.+++++ +|++|=+.+.... -+..+++.+.+..-+.|||.=|
T Consensus 77 ~~~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 77 DFSHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp CCGGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 67888875 9999977654321 0344556655444445555433
No 223
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.09 E-value=1.5 Score=41.37 Aligned_cols=101 Identities=14% Similarity=0.156 Sum_probs=58.9
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh--hhhhc-cccCCCCCHHHHhc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWA-HEHEPVNNLLDAVK 205 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~--k~~~a-~~~~~~~~L~eav~ 205 (388)
.||.|+|+|+-|..+|..|.. .| .+++++|+.-+ ..=+...++-. ...+- ++.....++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~-----~g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR-----SG-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH-----TS-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 589999999999999998832 35 36888887541 00000111100 00000 00011134544 55
Q ss_pred ccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 206 VIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 206 ~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
. +|++| ++..+ -..+++++.++.+. +..+|..+.|-..
T Consensus 69 ~--~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 69 P--MDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp C--CSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred C--CCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 4 88887 55543 45678999988643 5678888999863
No 224
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=82.86 E-value=0.54 Score=39.17 Aligned_cols=32 Identities=16% Similarity=0.407 Sum_probs=26.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|+|.-|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 479999999999999999932 35 368989884
No 225
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=82.85 E-value=1.2 Score=43.68 Aligned_cols=74 Identities=20% Similarity=0.250 Sum_probs=44.0
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc--CC-CCCHHHH
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EP-VNNLLDA 203 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~--~~-~~~L~ea 203 (388)
+.-||||+|+|.||+..|..| . ..| .+|.++|+.--+.-+| ..|+.+ +.... ++ ...+.+-
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L-~----~~~-------~~itlie~~~~~~y~~-~~l~~~---l~g~~~~~~l~~~~~~~ 71 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAA-L----GKC-------DDITMINSEKYLPYYR-PRLNEI---IAKNKSIDDILIKKNDW 71 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHH-T----TTC-------SCEEEECSSSSCCBCG-GGHHHH---HHSCCCGGGTBSSCHHH
T ss_pred CCCCEEEEcCcHHHHHHHHHH-h----CCC-------CEEEEEECCCCCCccc-ChhhHH---HcCCCCHHHccCCCHHH
Confidence 456899999999999999998 1 123 5799999875544344 333332 22111 11 1234455
Q ss_pred hcccCCcEEEEec
Q 016501 204 VKVIKPTILIGSS 216 (388)
Q Consensus 204 v~~vkptvlIG~S 216 (388)
.+..+.++..|..
T Consensus 72 ~~~~~i~~~~~~~ 84 (385)
T 3klj_A 72 YEKNNIKVITSEF 84 (385)
T ss_dssp HHHTTCEEECSCC
T ss_pred HHHCCCEEEeCCE
Confidence 5555566666643
No 226
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=82.66 E-value=1.2 Score=41.15 Aligned_cols=35 Identities=11% Similarity=0.363 Sum_probs=28.2
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..+|+|+|+|.||+..|..|. +.|+ ++.++|+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~-----~~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLR-----RSGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH-----HSSC-------CEEEECCSS
T ss_pred CcCCEEEECcCHHHHHHHHHHH-----HCCC-------CEEEEECCC
Confidence 3568999999999999999883 2363 699999864
No 227
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=82.52 E-value=2.8 Score=39.99 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|.++|..|.. .|. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~-----~G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGG-----RNA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHH-----cCC------CeEEEEeCC
Confidence 589999999999999999832 351 368888876
No 228
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=82.39 E-value=1.4 Score=42.85 Aligned_cols=41 Identities=32% Similarity=0.485 Sum_probs=31.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 179 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r 179 (388)
++|||+|||.||+..|..|. +.|.+ .+|.++|+..-..-+|
T Consensus 2 k~vvIIGaG~aGl~aA~~L~-----~~g~~-----~~V~lie~~~~~~y~~ 42 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLR-----QAKYP-----GRIALINDEKHLPYQR 42 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHH-----HTTCC-----SCEEEECCSSSSSBCS
T ss_pred CCEEEEcChHHHHHHHHHHH-----hhCcC-----CCEEEEeCCCCCCCCC
Confidence 58999999999999999983 34642 3799999976444344
No 229
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=82.15 E-value=1.4 Score=39.97 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=27.6
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|||.||+..|..|.. .| .++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YM-------LKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CC-------CcEEEEecc
Confidence 4699999999999999998832 35 359999997
No 230
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=82.10 E-value=3.5 Score=37.74 Aligned_cols=31 Identities=16% Similarity=0.173 Sum_probs=24.9
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-----RGH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 79999999999999998832 352 68888864
No 231
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=82.10 E-value=1.8 Score=40.03 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=25.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|..+|..|.. .| .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-----~g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-----AG-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 489999999999999998832 35 258888874
No 232
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.61 E-value=1.4 Score=39.65 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=26.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|||.||+..|..|.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999999832 35 369999974
No 233
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=81.32 E-value=4.2 Score=38.08 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=26.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..||.|+|+|..|.++|..|. +.| .+++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~-----~~G-------~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMT-----EWP-------GGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHT-----TST-------TCEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHH-----HCC-------CeEEEEeCC
Confidence 358999999999999999983 235 358888874
No 234
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.31 E-value=1.6 Score=42.42 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=31.9
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 179 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r 179 (388)
...+|||+|||.||+..|..|. +.|.+ .+|.++|+..-..-+|
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~-----~~g~~-----~~V~lie~~~~~~y~~ 50 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALR-----QNGFE-----GRVLVIGREPEIPYER 50 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHH-----HTTCC-----SCEEEEESSSSCCBCS
T ss_pred CCCcEEEECChHHHHHHHHHHH-----ccCcC-----CCEEEEecCCCCCcCc
Confidence 4578999999999999999983 34642 4699999875443333
No 235
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=80.64 E-value=1.5 Score=40.16 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=27.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|+|.||+..|..|.. .| .++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQ-------ASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEEcC
Confidence 4689999999999999988832 35 368999986
No 236
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=80.59 E-value=1.6 Score=40.47 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.5
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|+|+|||.||+..|..|.. .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999998832 35 3699999863
No 237
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=80.34 E-value=1.4 Score=43.65 Aligned_cols=42 Identities=26% Similarity=0.404 Sum_probs=31.8
Q ss_pred HhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 121 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 121 ~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+.++.-+..+|+|+|||.||+..|..|. +.| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~-----~~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQ-----KAG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHH-----HTT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHH-----HCC-------CCEEEEeccCC
Confidence 4454456789999999999999999883 235 36888887644
No 238
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=80.11 E-value=1.5 Score=40.84 Aligned_cols=31 Identities=23% Similarity=0.429 Sum_probs=24.8
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
-|+|+|||.||+..|..|. +.|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La-----~~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAA-----KYGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHH-----HTTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHH-----HCCC-------cEEEEeCC
Confidence 3899999999999999883 3475 57788864
No 239
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=80.02 E-value=1.7 Score=41.54 Aligned_cols=38 Identities=18% Similarity=0.080 Sum_probs=28.1
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+.+..+|+|+|||.||+..|..|.. .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999998832 463 6888887643
No 240
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=79.90 E-value=1.3 Score=38.79 Aligned_cols=94 Identities=14% Similarity=0.136 Sum_probs=54.2
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh-----hhhhcc-ccCCCCCHH
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 201 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~-----k~~~a~-~~~~~~~L~ 201 (388)
.+|+|.|| |--|..+++.|.. +.| -++++++++. + +.+... +..+.. +-.+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~----~~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT----YTD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH----HCC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh----cCC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 8888889888841 245 3688887751 1 012211 111111 112224678
Q ss_pred HHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEe
Q 016501 202 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 241 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFa 241 (388)
+++++ .|++|=+.+..+.-++.+++.|.+..-+.||+.
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 88886 899997765432226777777765444445553
No 241
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=79.84 E-value=4.1 Score=36.94 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=23.7
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
||.|+|+|..|..+|..|.. .|. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~-----~g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS-----RGV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TTC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHH-----CCC-------eEEEeCC
Confidence 79999999999999999842 353 5777665
No 242
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=79.35 E-value=11 Score=38.67 Aligned_cols=121 Identities=19% Similarity=0.129 Sum_probs=79.7
Q ss_pred CCCcccccCc---cchHHHHHHHHHHHHHH------------------hCCCccccEEEEeCcchHHHHHHHHHHHHHHH
Q 016501 95 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 153 (388)
Q Consensus 95 ~~~~~FnDDi---qGTa~V~lAgll~Al~~------------------~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~ 153 (388)
..|.+.|--- ..+|=-+++-+++..|- .|..|...+|.|+|.|..|..+|+.+.
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~----- 162 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIA----- 162 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHH-----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHH-----
Confidence 4566766533 23455578888887763 256799999999999999999999882
Q ss_pred hcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccCCcEEEEec----CCCCCCCHHHHHH
Q 016501 154 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 229 (388)
Q Consensus 154 ~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vkptvlIG~S----~~~g~ft~evi~~ 229 (388)
..|+ +++.+|+.- .....+..-+. ..+|.|+++. +|+++=+- ...++++++.+..
T Consensus 163 ~~G~-------~V~~~d~~~--------~~~~a~~~g~~----~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 163 AFGA-------YVVAYDPYV--------SPARAAQLGIE----LLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp TTTC-------EEEEECTTS--------CHHHHHHHTCE----ECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred hCCC-------EEEEECCCC--------ChhHHHhcCcE----EcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 2353 688887641 11111110011 1279999987 99888542 2235788877777
Q ss_pred HhcCCCCcEEEecCC
Q 016501 230 MASFNEKPLILALSN 244 (388)
Q Consensus 230 Ma~~~~rPIIFaLSN 244 (388)
|. +..+|.=.|.
T Consensus 222 ~k---~g~ilin~ar 233 (529)
T 1ygy_A 222 TK---PGVIIVNAAR 233 (529)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCCEEEECCC
Confidence 75 6678887874
No 243
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.09 E-value=4.7 Score=37.51 Aligned_cols=106 Identities=12% Similarity=0.128 Sum_probs=62.7
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh----hhhhcc-ccCCCCC
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 199 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~----k~~~a~-~~~~~~~ 199 (388)
++..||+|.|| |--|..+++.|.. .|- .-+++.+|+...-. ....+... +..+.+ +-.+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~-----~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQ-----SYE-----TYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHH-----HCT-----TEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHh-----hCC-----CcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 8999999998843 252 24677777753211 10111111 111111 1122246
Q ss_pred HHHHhcccCCcEEEEecCCCCCC----------------CHHHHHHHhcCCCCcEEEecC
Q 016501 200 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 200 L~eav~~vkptvlIG~S~~~g~f----------------t~evi~~Ma~~~~rPIIFaLS 243 (388)
+.++++..++|++|=+.+....- |..+++.+.+..-+.+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88889888899999877653211 356788888776666888644
No 244
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=79.09 E-value=2 Score=41.35 Aligned_cols=36 Identities=19% Similarity=0.470 Sum_probs=28.9
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.++.+|+|+|||.||+..|..|. +.|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~-----~~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQ-----QNGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHH-----TTTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEeCCC
Confidence 35679999999999999999883 3463 688999864
No 245
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=78.96 E-value=1.8 Score=40.08 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=27.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|+|.||+..|..|.. .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 5689999999999999988832 35 369999987
No 246
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=78.89 E-value=1.8 Score=38.43 Aligned_cols=92 Identities=14% Similarity=0.151 Sum_probs=51.8
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhh----hcccc-CCCCCHHHH-
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAHEH-EPVNNLLDA- 203 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~----~a~~~-~~~~~L~ea- 203 (388)
||+|+|+|..|..+|+.|.. .| .+++++|++- +.+...... +...+ .....|.++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~~-------~~~~~l~~~~~~~~i~gd~~~~~~l~~a~ 62 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS-----RK-------YGVVIINKDR-------ELCEEFAKKLKATIIHGDGSHKEILRDAE 62 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH-----TT-------CCEEEEESCH-------HHHHHHHHHSSSEEEESCTTSHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCH-------HHHHHHHHHcCCeEEEcCCCCHHHHHhcC
Confidence 79999999999999999832 35 4688898741 112221111 11111 111346555
Q ss_pred hcccCCcEEEEecCCCCCCCHHHHHHHhc-CCCCcEEEecCC
Q 016501 204 VKVIKPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSN 244 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~ft~evi~~Ma~-~~~rPIIFaLSN 244 (388)
+++ +|++|-+... . ..-..+..+++ .+..+-|++.+|
T Consensus 63 i~~--ad~vi~~~~~-d-~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 63 VSK--NDVVVILTPR-D-EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CCT--TCEEEECCSC-H-HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred ccc--CCEEEEecCC-c-HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 554 8999966543 2 22334444444 356666666655
No 247
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=78.85 E-value=1.7 Score=40.89 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=26.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..||.|+|+|..|.++|..|.. .|. +++++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~-----~G~-------~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR-----AGL-------STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 3689999999999999999843 353 68888874
No 248
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=78.72 E-value=2.1 Score=39.73 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.6
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..|+|+|+|.+|+.+|..|.. .| .++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G-------~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GG-------HEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4689999999999999998832 46 369999987
No 249
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=79.98 E-value=0.41 Score=43.01 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=54.8
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhc
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 205 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~ 205 (388)
+.+.||.|+|+|..|..+|+.|.. .| .+++++|++-- + +.+ ....-...++.++++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~-----~G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQ-----CG-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 566789999999999999998842 24 25777776421 1 111 111111125677777
Q ss_pred ccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 206 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 206 ~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
. +|++| ++..+. -+++++ ......+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~-~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLA-ELADSLKGRVLIDVSNNQ 108 (201)
Confidence 5 78776 333332 345555 233233456888899977
No 250
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=78.49 E-value=1.6 Score=40.09 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|+|.||+..|..|.. .|+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLAR-----AEI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 4789999999999999999832 363 58899984
No 251
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=78.20 E-value=7.4 Score=36.47 Aligned_cols=32 Identities=22% Similarity=0.461 Sum_probs=25.4
Q ss_pred cEEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+| +|..|..+|..|. +.|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~-----~~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLR-----ASGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHH-----TTTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHH-----hCCC-------eEEEEECC
Confidence 4899999 9999999999883 2353 68888764
No 252
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=78.09 E-value=2.1 Score=38.99 Aligned_cols=96 Identities=13% Similarity=0.184 Sum_probs=57.5
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 205 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~ 205 (388)
+..||+|.|||--|..+++.|.. .| .+++.++++- +.+... ..+.+ +-.+..++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 34689999999999999988843 35 3688787641 122211 11111 1122345666666
Q ss_pred ccCCcEEEEecCCCC-----------CCCHHHHHHHhcCCCCcEEEecC
Q 016501 206 VIKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 206 ~vkptvlIG~S~~~g-----------~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
. ++|++|=+.+... ..+..+++.+.+..-+.+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999997654311 02567788877655567887544
No 253
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=78.08 E-value=3 Score=39.97 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=28.3
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+.+|+|+|||.||+..|-.|. +.|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La-----~~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVN-----KSGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-----TTTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHH-----hCCC-------CEEEEeCCCC
Confidence 468999999999999998883 3464 6999998743
No 254
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=78.00 E-value=2.7 Score=38.16 Aligned_cols=90 Identities=12% Similarity=0.155 Sum_probs=53.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 208 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vk 208 (388)
.||.|+|+|..|..+++.|. +.| .+++++|++- +......+.| .-....++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~-----~~g-------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLK-----QTP-------HELIISGSSL-------ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHT-----TSS-------CEEEEECSSH-------HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHH-----hCC-------CeEEEECCCH-------HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 48999999999999998882 234 4678887631 1122222111 11223578888875
Q ss_pred CcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 209 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 209 ptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
+|++|=+. .+ -..+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~v-~~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGI-KP-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEECS-CG-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEEe-Cc-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 88887433 22 35566776654 344666665544
No 255
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=77.98 E-value=11 Score=38.23 Aligned_cols=121 Identities=17% Similarity=0.209 Sum_probs=64.1
Q ss_pred HHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc----cccCCC----CCccH-----
Q 016501 119 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL----IVSSRK----DSLQH----- 185 (388)
Q Consensus 119 l~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl----v~~~r~----~~l~~----- 185 (388)
.+..++...-.||.|+|+|..|.++|.+|. + | -+++++|++-= +..++. +++.+
T Consensus 27 ~~~~~r~~~~mkIaVIGlG~mG~~lA~~La-----~-G-------~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~ 93 (432)
T 3pid_A 27 GQQMGRGSEFMKITISGTGYVGLSNGVLIA-----Q-N-------HEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK 93 (432)
T ss_dssp --------CCCEEEEECCSHHHHHHHHHHH-----T-T-------SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS
T ss_pred CcccccccCCCEEEEECcCHHHHHHHHHHH-----c-C-------CeEEEEecCHHHhhHHhccCCccccccHHHHHhhc
Confidence 355667777789999999999999998772 2 5 36888887421 111100 00000
Q ss_pred ---------hhhhhcc--------ccC--------CCCCHHHHhcc---cC-CcEEEEecCCCCCCCHHHHHHHhcCCCC
Q 016501 186 ---------FKKPWAH--------EHE--------PVNNLLDAVKV---IK-PTILIGSSGVGRTFTKEVIEAMASFNEK 236 (388)
Q Consensus 186 ---------~k~~~a~--------~~~--------~~~~L~eav~~---vk-ptvlIG~S~~~g~ft~evi~~Ma~~~~r 236 (388)
....+.. +.+ +...+.++++. ++ -+++|=.||++--.|+++.+... ++
T Consensus 94 ~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~---~~ 170 (432)
T 3pid_A 94 PLNFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLG---ID 170 (432)
T ss_dssp CCCEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHT---CC
T ss_pred cCCeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHh---hc
Confidence 0000000 000 00123333332 23 45777788887667888877765 45
Q ss_pred cEEEecCCCCCCCCCCHHHHhc
Q 016501 237 PLILALSNPTSQSECTAEEAYT 258 (388)
Q Consensus 237 PIIFaLSNPt~~~E~tpe~A~~ 258 (388)
-++| ||...-|-.+..-..
T Consensus 171 ~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 171 NVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp CEEE---CCCCCCTTSHHHHHH
T ss_pred cEee---cCccCCcchhhhccc
Confidence 5655 898888888765544
No 256
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=77.98 E-value=2 Score=42.62 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=27.1
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
||||+|+|.||+..|..|.. .|. .-+|.++|+..-
T Consensus 2 KVvIIG~G~AGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 36 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRR-----LDK-----ESDIIIFEKDRD 36 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHH-----HCS-----SSCEEEEESSSC
T ss_pred eEEEECCCHHHHHHHHHHHh-----CCC-----CCcEEEEeCCCC
Confidence 79999999999999988832 353 247999988643
No 257
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.84 E-value=2.1 Score=40.63 Aligned_cols=101 Identities=15% Similarity=0.162 Sum_probs=56.0
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh-------hhccccCCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-------PWAHEHEPV 197 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~-------~~a~~~~~~ 197 (388)
.....||.|+|+|+-|..+|..|.. .| .+++++ ++.= +.+.+..... .+-..-...
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~-----~G-------~~V~l~-~~~~----~~~~i~~~g~~~~~~~~~~~~~~~~~ 78 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLAR-----AG-------HEVILI-ARPQ----HVQAIEATGLRLETQSFDEQVKVSAS 78 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHH-----TT-------CEEEEE-CCHH----HHHHHHHHCEEEECSSCEEEECCEEE
T ss_pred hccCCcEEEECcCHHHHHHHHHHHH-----CC-------CeEEEE-EcHh----HHHHHHhCCeEEEcCCCcEEEeeeee
Confidence 3456899999999999999999943 35 245555 3210 0000110000 000000011
Q ss_pred CCHHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCCC
Q 016501 198 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 247 (388)
Q Consensus 198 ~~L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt~ 247 (388)
.++.+ ++. +|++| ++... -..+++++.++.+. +..+|..++|...
T Consensus 79 ~~~~~-~~~--~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~ 124 (318)
T 3hwr_A 79 SDPSA-VQG--ADLVL-FCVKS-TDTQSAALAMKPALAKSALVLSLQNGVE 124 (318)
T ss_dssp SCGGG-GTT--CSEEE-ECCCG-GGHHHHHHHHTTTSCTTCEEEEECSSSS
T ss_pred CCHHH-cCC--CCEEE-EEccc-ccHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 34543 444 88877 44433 36799999998654 4568888999874
No 258
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=77.82 E-value=2.1 Score=39.40 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=27.1
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|+|.||+..|..|.. .| .++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SG-------FSVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCC
Confidence 4689999999999999998832 35 369999985
No 259
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=77.79 E-value=2.2 Score=40.19 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=29.0
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
.+..|+|+|||.+|+.+|..|.. .| .++.++|+..+
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 34689999999999999999843 36 36999998644
No 260
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=77.67 E-value=2.4 Score=35.82 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=26.2
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
-+++|+|+|.+|+..|..|.. .| .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~-----~g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR-----AG-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCC
Confidence 479999999999999998832 35 478999876
No 261
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=77.44 E-value=2.2 Score=41.01 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=27.6
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
-+..+|+|+|||.+|+..|..|.. .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 356789999999999999999832 464 588888764
No 262
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=77.38 E-value=2 Score=40.58 Aligned_cols=36 Identities=19% Similarity=0.275 Sum_probs=28.2
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
++..|+|+|||.||+..|..|.. .|+ ++.++|++-.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~~ 38 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRPE 38 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCCC
Confidence 34689999999999999998832 463 5888888753
No 263
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=77.30 E-value=3.2 Score=38.41 Aligned_cols=103 Identities=11% Similarity=0.094 Sum_probs=55.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccH-hhhhhccc-------cCCCCCH
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAHE-------HEPVNNL 200 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~-~k~~~a~~-------~~~~~~L 200 (388)
.||.|+|+|.-|..+|..|........| ..+++++|+..-+ +.+.. ........ .....+-
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g------~~~V~~~~r~~~~-----~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 77 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDG------LLEVSWIARGAHL-----EAIRAAGGLRVVTPSRDFLARPTCVTDN 77 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTS------SEEEEEECCHHHH-----HHHHHHTSEEEECSSCEEEECCSEEESC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCC------CCCEEEEEcHHHH-----HHHHhcCCeEEEeCCCCeEEecceEecC
Confidence 4899999999999999988432100003 0368888862110 11111 00000000 0000122
Q ss_pred HHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 201 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
.++++. +|++| ++..+. -.+++++.++.+- +..+|..++|-.
T Consensus 78 ~~~~~~--~D~vi-l~vk~~-~~~~v~~~i~~~l~~~~~iv~~~nG~ 120 (317)
T 2qyt_A 78 PAEVGT--VDYIL-FCTKDY-DMERGVAEIRPMIGQNTKILPLLNGA 120 (317)
T ss_dssp HHHHCC--EEEEE-ECCSSS-CHHHHHHHHGGGEEEEEEEEECSCSS
T ss_pred ccccCC--CCEEE-EecCcc-cHHHHHHHHHhhcCCCCEEEEccCCC
Confidence 345654 78777 443332 3589999887543 355777889975
No 264
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=77.28 E-value=2.3 Score=40.94 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=26.3
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|+|+|||.+|+..|..|.. .| .++.++++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~-----~G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN-----AG-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----cC-------CeEEEEecCC
Confidence 379999999999999999932 36 3688888753
No 265
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=77.19 E-value=3.8 Score=35.66 Aligned_cols=94 Identities=10% Similarity=0.151 Sum_probs=53.9
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhcc
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~ 206 (388)
.||+|.|| |--|..+++.|.. .| .+++.+|++.- +.+.+.. ...+.+ +-.+..++.+++++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~----~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~ 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHPE----KIKIENE-HLKVKKADVSSLDEVCEVCKG 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCGG----GCCCCCT-TEEEECCCTTCHHHHHHHHTT
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCcc----cchhccC-ceEEEEecCCCHHHHHHHhcC
Confidence 58999996 8888888888832 35 47888888621 1112211 111111 11223468888886
Q ss_pred cCCcEEEEecCCCC----------CCCHHHHHHHhcCCCCcEEEe
Q 016501 207 IKPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILA 241 (388)
Q Consensus 207 vkptvlIG~S~~~g----------~ft~evi~~Ma~~~~rPIIFa 241 (388)
+|++|=+.+... ..+..+++.|.+..-+.+||.
T Consensus 68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 999997764320 014456666665544455553
No 266
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=76.99 E-value=2.6 Score=40.56 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=27.6
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
...+|+|+|||.+|+..|..|.. .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 45789999999999999999832 464 577888753
No 267
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=76.83 E-value=6.6 Score=40.55 Aligned_cols=98 Identities=15% Similarity=0.252 Sum_probs=57.5
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccH-hhhhhccccCCCCC----HHH
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAHEHEPVNN----LLD 202 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~-~k~~~a~~~~~~~~----L~e 202 (388)
+.||||+|||+.|-++|++|.. +.++. ..+|.+.|++-- + .++-+ ....+....-...+ |.+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~----~~dv~----~~~I~vaD~~~~----~-~~~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFE----KFDIK----PSQVTIIAAEGT----K-VDVAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH----HBCCC----GGGEEEEESSCC----S-CCHHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHh----CCCCc----eeEEEEeccchh----h-hhHHhhcCCceeEEeccchhHHHHHHH
Confidence 5789999999999999999943 33442 247888887521 1 12211 12222211111122 445
Q ss_pred HhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCC
Q 016501 203 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 203 av~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
.|+. .|++|=+| ...++.++++.-.+ -.==.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~acle--aGv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQ--KGALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHH--HTCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHH--cCCCEEECCC
Confidence 6665 59999655 34577788877654 2234566776
No 268
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=76.69 E-value=2.5 Score=41.27 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=28.7
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.+++..|||+|||.+|+.+|..|... | ..++.++|+
T Consensus 20 ~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 20 HMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 35677999999999999999999432 3 147999998
No 269
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=76.63 E-value=1.4 Score=43.33 Aligned_cols=118 Identities=19% Similarity=0.197 Sum_probs=65.5
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhc-c--ccCCCCCHHHH
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEPVNNLLDA 203 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a-~--~~~~~~~L~ea 203 (388)
++.||+|+|+|..|-.+|+.|.. . .++.++|++ .+ .+......+. . +..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~------------~-~~V~V~~R~----~~---~a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKD------------E-FDVYIGDVN----NE---NLEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT------------T-SEEEEEESC----HH---HHHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHc------------C-CeEEEEECC----HH---HHHHHHhhCCeEEEecCCHHHHHHH
Confidence 46799999999999999998821 1 357778773 11 1222222221 0 11123578899
Q ss_pred hcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCCCCCCCC--CHHHHhcccCCcEEEeeCCCCCce
Q 016501 204 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSEC--TAEEAYTWSKGRAIFASGSPFDPF 275 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNPt~~~E~--tpe~A~~~t~Grai~AtGspf~pv 275 (388)
+++ +|++|-+.. ..+..++++.-.+ ..=.++-+|.-. +|. --++|.+ .|.. +..|+-|.|-
T Consensus 75 l~~--~DvVIn~~P--~~~~~~v~~a~l~--~G~~~vD~s~~~--~~~~~l~~~Ak~--aG~~-~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP--GFLGFKSIKAAIK--SKVDMVDVSFMP--ENPLELRDEAEK--AQVT-IVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC--HHHHHHHHHHHHH--TTCCEEECCCCS--SCGGGGHHHHHH--TTCE-EECSCBTTTB
T ss_pred HhC--CCEEEECCC--hhhhHHHHHHHHH--hCCeEEEccCCc--HHHHHHHHHHHH--cCCE-EEECCCCcch
Confidence 986 999997632 2345566655333 233466677632 232 2344543 3533 3345446553
No 270
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=76.62 E-value=1.7 Score=46.81 Aligned_cols=37 Identities=27% Similarity=0.474 Sum_probs=31.8
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
|++.||+++|+|.-|.-+++.|+. .|+ .+|.++|.+=
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~-----~Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLAL-----SGF------RQIHVIDMDT 445 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHT-----TTC------CEEEEEECCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHH-----cCC------CcEEEECCCe
Confidence 478999999999999999999943 486 7999999873
No 271
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=76.61 E-value=7.4 Score=38.12 Aligned_cols=123 Identities=6% Similarity=-0.012 Sum_probs=78.9
Q ss_pred eeeccCCCchHHHHHHHHcCCCcccc--cCccchHHHHHHHHHHHHHHhC------CCccccEEEEeCcchHHHHHHHHH
Q 016501 76 IQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRFLFLGAGEAGTGIAELI 147 (388)
Q Consensus 76 I~~EDf~~~~af~iL~ryr~~~~~Fn--DDiqGTa~V~lAgll~Al~~~g------~~L~d~riv~~GAGsAg~giA~ll 147 (388)
|-+-.++ +.+.+.+.+| .++||.| || +-=-.=+||=++.-.+-.| ++|+..||.++|-+.- .+|+-+
T Consensus 104 iviR~~~-~~~~~~lA~~-~~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~~~--~va~Sl 178 (328)
T 3grf_A 104 CTARLAT-KEMMREMAQH-ASVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDSMN--NVTYDL 178 (328)
T ss_dssp EEEECSS-HHHHHHHHHH-CSSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCCSS--HHHHHH
T ss_pred EEEecCC-hhHHHHHHHh-CCCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCCCc--chHHHH
Confidence 3344443 3444555565 3689998 55 4444557888888777777 4799999999999852 477777
Q ss_pred HHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc---c---CCCCCHHHHhcccCCcEEEE
Q 016501 148 ALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVKVIKPTILIG 214 (388)
Q Consensus 148 ~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~---~---~~~~~L~eav~~vkptvlIG 214 (388)
+..+ .+.|+ ++.++--+|+..+-. +++.+.-+.++++ . ....++.|+|++ +||+.-
T Consensus 179 ~~~~-~~~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDvvyt 240 (328)
T 3grf_A 179 MRGC-ALLGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDVVYT 240 (328)
T ss_dssp HHHH-HHHTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSEEEE
T ss_pred HHHH-HHcCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCEEEe
Confidence 5443 44574 688888888853111 1232223334332 1 123689999998 999974
No 272
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=76.51 E-value=2.5 Score=39.89 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=28.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
+..|+|+|||.+|+.+|..|.. .| .++.++|+....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~-----~G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK-----QG-------VKTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCCCC
Confidence 3579999999999999999832 36 369999987543
No 273
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=76.49 E-value=2.2 Score=40.28 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.1
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|||.+|+.+|..|.. .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999999832 363 699999874
No 274
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=76.35 E-value=2.4 Score=40.58 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=27.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|||.||+..|..|. +.|+ ++.++|+.-
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~-----~~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLG-----RQGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHH-----hCCC-------cEEEEeCCC
Confidence 468999999999999999883 2464 588888764
No 275
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=76.35 E-value=2.5 Score=38.57 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|+|.||+..|..|.. .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999998832 353 279999985
No 276
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=76.22 E-value=2.6 Score=39.60 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=27.9
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
...+|+|+|+|.||+..|..|.. .| .++.++|++.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 35789999999999999988832 35 3689999863
No 277
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=75.99 E-value=3.4 Score=39.72 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=26.6
Q ss_pred HHHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEecCCC
Q 016501 200 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 245 (388)
Q Consensus 200 L~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaLSNP 245 (388)
+...++..|||++||..+-. --.....|+....|+|.=-+|-
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n~ 125 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQNA 125 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECSS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecch
Confidence 34568889999999976532 1122233455578999765553
No 278
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=75.84 E-value=2 Score=42.62 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=27.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
..+|||+|||.||+..|..|... ..| .+|.++|+..-+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCcc
Confidence 46899999999999999998332 113 479999987554
No 279
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=75.83 E-value=2.2 Score=41.21 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=27.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
.+|||+|||.||+..|..|.... ..| .+|.++|++--
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~--~~g-------~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV--GSK-------ADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH--GGG-------SEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhC--CCC-------CeEEEEeCCCC
Confidence 47999999999999999984311 123 47888887653
No 280
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=75.74 E-value=2.6 Score=39.61 Aligned_cols=35 Identities=11% Similarity=0.227 Sum_probs=28.3
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
..|+|+|||.+|+.+|..|.. .| .++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G-------~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AG-------LNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TT-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCCCC
Confidence 579999999999999999832 36 369999987543
No 281
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=75.55 E-value=2.2 Score=39.06 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=26.7
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
...+|+|+|||.||+..|..|. +.|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~-----~~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAA-----RANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH-----TTTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHH-----HCCC-------cEEEEccC
Confidence 4578999999999999999883 2353 57888854
No 282
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=75.42 E-value=3 Score=39.35 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..|+|+|||.+|+.+|..|.. .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999998832 36 4799999864
No 283
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=75.30 E-value=2.7 Score=41.31 Aligned_cols=36 Identities=22% Similarity=0.388 Sum_probs=28.5
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
...+|+|+|||.||+..|..|. +.|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~-----~~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALL-----AEKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH-----TTTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHH-----hcCCC-----CCeEEEecC
Confidence 3568999999999999999983 34641 378999986
No 284
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=75.24 E-value=2.6 Score=40.68 Aligned_cols=39 Identities=21% Similarity=0.419 Sum_probs=29.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 179 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r 179 (388)
..++||+|+|.||+..|..|. +.| +|.++|+.-.....|
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~-----~~g--------~V~lie~~~~~~~~~ 46 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLS-----QTY--------EVTVIDKEPVPYYSK 46 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHT-----TTS--------EEEEECSSSSCCCCS
T ss_pred CCcEEEECCcHHHHHHHHHHh-----hcC--------CEEEEECCCCCcccc
Confidence 358999999999999999882 122 799999876543333
No 285
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=75.21 E-value=2.7 Score=41.58 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.3
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|+|.||+..|..+.. .| .+|.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999988832 35 479999987
No 286
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=75.21 E-value=2.3 Score=41.87 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.2
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||||+|+|.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999998321 21 1368888876
No 287
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=75.17 E-value=2.6 Score=40.41 Aligned_cols=33 Identities=36% Similarity=0.538 Sum_probs=26.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
...||.|+|+|..|.+||..+. + |. +++++|+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~~ 43 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDVS 43 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEECC
Confidence 3578999999999999999984 3 64 58888863
No 288
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.16 E-value=2.9 Score=34.16 Aligned_cols=34 Identities=24% Similarity=0.488 Sum_probs=26.6
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..+|+|+|+|.-|..+|+.|.. .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 34689999999999999999832 35 368888874
No 289
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=75.14 E-value=2 Score=39.72 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=26.9
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
...+|+|+|||.||+..|..|.. .|. ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-----AEL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEec
Confidence 45789999999999999999832 353 5888997
No 290
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=74.79 E-value=9 Score=33.59 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=55.5
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHH
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 203 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~ea 203 (388)
++..+++|.|| |--|..+++.|.. .|. ..+++++|++. ++.+.+......+.. +-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~-----~G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILE-----QGL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHH-----HTC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHc-----CCC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999995 7788888888843 252 12788888752 111111111111111 11223467777
Q ss_pred hcccCCcEEEEecCCCCC-------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 204 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~-------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
++. +|++|=+.+.... -+..+++.|.+...+.|||.=|
T Consensus 82 ~~~--~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 775 9999987764310 1344556665544445665433
No 291
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=74.65 E-value=2.9 Score=39.83 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=29.1
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
+..|+|+|||.+|+.+|..|.. .|. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 3589999999999999998832 463 69999987654
No 292
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=74.58 E-value=4.6 Score=37.17 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=24.9
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
||.|+|+|..|..+|..|.. .|. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK-----HGY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 79999999999999999832 352 58888874
No 293
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=74.54 E-value=3.9 Score=31.64 Aligned_cols=84 Identities=17% Similarity=0.196 Sum_probs=50.8
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh---hhcc-ccCCCCCHHH
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWAH-EHEPVNNLLD 202 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~---~~a~-~~~~~~~L~e 202 (388)
...||+|+|+|..|..+++.|.. .|. .+++++|++. +.+...+. .+.. +..+..++.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~-------~~~~~~~~~~~~~~~~d~~~~~~~~~ 65 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL-------AALAVLNRMGVATKQVDAKDEAGLAK 65 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH-------HHHHHHHTTTCEEEECCTTCHHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH-------HHHHHHHhCCCcEEEecCCCHHHHHH
Confidence 34689999999999999998832 351 4688888741 11221111 1111 1111245777
Q ss_pred HhcccCCcEEEEecCCCCCCCHHHHHHHhc
Q 016501 203 AVKVIKPTILIGSSGVGRTFTKEVIEAMAS 232 (388)
Q Consensus 203 av~~vkptvlIG~S~~~g~ft~evi~~Ma~ 232 (388)
++++ +|++|=+.+ ..++..+++.+.+
T Consensus 66 ~~~~--~d~vi~~~~--~~~~~~~~~~~~~ 91 (118)
T 3ic5_A 66 ALGG--FDAVISAAP--FFLTPIIAKAAKA 91 (118)
T ss_dssp HTTT--CSEEEECSC--GGGHHHHHHHHHH
T ss_pred HHcC--CCEEEECCC--chhhHHHHHHHHH
Confidence 7775 899986653 3466777777654
No 294
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=74.52 E-value=2.9 Score=40.81 Aligned_cols=42 Identities=19% Similarity=0.187 Sum_probs=31.3
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 179 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r 179 (388)
..+|||+|+|.||+..|..|.. .|. ..+|.++|+..-+.-+|
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~~~~~~ 48 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQ-----AGY-----QGLITVVGDEAERPYDR 48 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHH-----HTC-----CSCEEEEESSCSCCBCS
T ss_pred CCcEEEECChHHHHHHHHHHHc-----cCC-----CCeEEEEECCCCCcccC
Confidence 4689999999999999999843 353 13699999976543333
No 295
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=74.50 E-value=5.4 Score=39.42 Aligned_cols=30 Identities=20% Similarity=0.441 Sum_probs=24.7
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
||.|+|+|..|..+|..|. + | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La-----~-G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLS-----L-Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHT-----T-T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHh-----C-C-------CEEEEEECC
Confidence 7999999999999998882 2 4 368889874
No 296
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=74.23 E-value=2.9 Score=38.57 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=26.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|+|+|||.+|+.+|..|.. .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999999832 464 588898863
No 297
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=73.99 E-value=3.1 Score=40.19 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=27.1
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|||.||+..|..|. +.|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~-----~~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALH-----QAGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-----hCCC------CeEEEEECCC
Confidence 468999999999999999883 2464 2388888754
No 298
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=73.60 E-value=3 Score=38.35 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=25.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
=-|+|+|+|+||+..|..+. +.| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~-----~~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYAS-----RAN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----HTT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHH-----HCC-------CCEEEEecC
Confidence 35799999999999998773 246 368899874
No 299
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=73.51 E-value=3.3 Score=39.66 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=26.6
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+|+|+|||.+|+.+|..|.. .| .++.++++...
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSK-----AG-------HEVEVFERLPI 34 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHh-----CC-------CceEEEeCCCC
Confidence 79999999999999999833 35 46888888643
No 300
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=73.49 E-value=7.6 Score=36.15 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=61.4
Q ss_pred CCccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCC---CCccHhhhhhcc-ccCCCC
Q 016501 124 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 198 (388)
Q Consensus 124 ~~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~---~~l~~~k~~~a~-~~~~~~ 198 (388)
++++..+|+|.|| |--|..+++.|. +.| .+++.+|+..- ... ..+. ...+.. +-.+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~-----~~g-------~~V~~~~r~~~---~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWL-----PQG-------HEILVIDNFAT---GKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHG-----GGT-------CEEEEEECCSS---SCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHH-----HCC-------CEEEEEECCCc---cchhhhhccC--CceEEEeeCCCHH
Confidence 4578889999998 888888888873 235 36888887411 110 1110 111111 112223
Q ss_pred CHHHHhcccCCcEEEEecCCCCC-C------------CHHHHHHHhcCCCCcEEEecC
Q 016501 199 NLLDAVKVIKPTILIGSSGVGRT-F------------TKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 199 ~L~eav~~vkptvlIG~S~~~g~-f------------t~evi~~Ma~~~~rPIIFaLS 243 (388)
++.++++.+++|++|=+.+.... - +..+++.+.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57788875569999988765432 0 345667776655567888644
No 301
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=73.23 E-value=3.4 Score=39.14 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=29.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+.+|+|+|||.+|+.+|..|... .| ..++.++|+..+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G------~~~V~vlE~~~~ 57 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HG------ITNVAVLEKGWL 57 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC------CCCEEEECSSST
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cC------CCcEEEEeCCCC
Confidence 56899999999999999999431 25 147999998753
No 302
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=73.18 E-value=3.2 Score=41.28 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.5
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|+|.||+..|..+.. .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 5689999999999999998832 35 479999986
No 303
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=73.13 E-value=2.1 Score=43.55 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=25.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||||+|+|.||+..|+.|. +.+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~-----~~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHID-----TKK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSC-----TTT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhh-----hCC-------CcEEEECCC
Confidence 48999999999999988771 222 379999985
No 304
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=73.02 E-value=3.2 Score=37.61 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=25.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l-~D~~ 172 (388)
..+|+|+|||.||+..|..|.. .|. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATR-----GGL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----HTC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----CCC-------CeEEEEeCC
Confidence 3589999999999999998843 253 4666 8873
No 305
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=72.99 E-value=3.4 Score=39.90 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=26.6
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+|+|+|||.+|+..|..|.. .| .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999999833 36 46888888643
No 306
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=72.68 E-value=5.1 Score=38.02 Aligned_cols=106 Identities=20% Similarity=0.196 Sum_probs=57.8
Q ss_pred ccchHHHHHHHHHHHHH-HhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCC
Q 016501 104 IQGTASVVLAGVVAALK-LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 182 (388)
Q Consensus 104 iqGTa~V~lAgll~Al~-~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~ 182 (388)
.+......++.-+.+++ ..+. ..++|+|.|||..|...+.+. +..|. ++++.+|+. .+|
T Consensus 142 ~~aa~~~~~~ta~~~l~~~~~~--~g~~VlV~GaG~vG~~~~q~a-----~~~Ga------~~Vi~~~~~----~~~--- 201 (343)
T 2dq4_A 142 EVAAILEPFGNAVHTVYAGSGV--SGKSVLITGAGPIGLMAAMVV-----RASGA------GPILVSDPN----PYR--- 201 (343)
T ss_dssp HHHTTHHHHHHHHHHHHSTTCC--TTSCEEEECCSHHHHHHHHHH-----HHTTC------CSEEEECSC----HHH---
T ss_pred HHHHhhhHHHHHHHHHHHhCCC--CCCEEEEECCCHHHHHHHHHH-----HHcCC------CEEEEECCC----HHH---
Confidence 34444334555566776 4443 889999999998887776655 23463 478888763 111
Q ss_pred ccHhhhhhccc--cCCCCCHHHHhcc---cCCcEEEEecCCCCCCCHHHHHHHh
Q 016501 183 LQHFKKPWAHE--HEPVNNLLDAVKV---IKPTILIGSSGVGRTFTKEVIEAMA 231 (388)
Q Consensus 183 l~~~k~~~a~~--~~~~~~L~eav~~---vkptvlIG~S~~~g~ft~evi~~Ma 231 (388)
+...++. |.. .....++.+.++. -+.|++|=+++.. ...++.++.|+
T Consensus 202 ~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~ 253 (343)
T 2dq4_A 202 LAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALI 253 (343)
T ss_dssp HGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred HHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHh
Confidence 1111211 221 1112356666653 2588888776531 22344555554
No 307
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=72.67 E-value=3.1 Score=41.33 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.4
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
++.+|+|+|+|.||+..|..+.. .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999998832 35 4799999874
No 308
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=72.66 E-value=3.1 Score=41.48 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=28.5
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|+|+|||.||+..|..+.. .| .++.++|++-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 45789999999999999999832 35 4699999863
No 309
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=72.57 E-value=3.2 Score=41.04 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=27.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|+|.||+..|..+. +.| .++.++|++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~-----~~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAA-----MYG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-----TTT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHH-----hCC-------CeEEEEcCC
Confidence 468999999999999999883 235 479999986
No 310
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=72.39 E-value=3.5 Score=42.41 Aligned_cols=35 Identities=26% Similarity=0.268 Sum_probs=28.7
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|||+|||.||+..|..|. +.|+ +|.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~-----~~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLIN-----QAGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHH-----hCCC-------CEEEEeCCC
Confidence 4678999999999999999983 2463 599999874
No 311
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=72.32 E-value=7.2 Score=37.20 Aligned_cols=59 Identities=22% Similarity=0.150 Sum_probs=39.6
Q ss_pred ccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 101 NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 101 nDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
-++.++.....++.-+.+++..+.+ ..++|+|+|||+.|...+.+. +..|. ++|+.+|+
T Consensus 154 ~s~~~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqla-----k~~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 154 MSYENGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCA-----KAAGA------CPLVITDI 212 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHH-----HHTTC------CSEEEEES
T ss_pred CCHHHHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHH-----HHcCC------CEEEEECC
Confidence 3555665555566667777665544 567999999998887776555 33473 56888876
No 312
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=72.11 E-value=3.2 Score=41.45 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|+|.||+..|..+.. .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999998832 35 4699999754
No 313
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=72.03 E-value=1.9 Score=44.80 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=62.0
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccC---CC-----CCccHhhhhhcc---
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RK-----DSLQHFKKPWAH--- 192 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~---r~-----~~l~~~k~~~a~--- 192 (388)
++|++.||+++|+|..|.-+|+.|+. .|+ ++|.++|.+=+ ..+ |+ +++-..|..-+.
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~-----aGV------g~itlvD~D~V-e~sNL~RQ~l~~~~dvG~~Ka~~a~~~l 95 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVL-----PGI------GSFTIIDGNQV-SGEDAGNNFFLQRSSIGKNRAEAAMEFL 95 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECCCBB-CHHHHHHCTTCCGGGBTSBHHHHHHHHH
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHH-----cCC------CeEEEEeCCEe-chhhcccCccCChhhcCcHHHHHHHHHH
Confidence 35789999999999999999999943 486 79999998632 111 10 112112211111
Q ss_pred -c-cCCC------CCHH-------HHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEe
Q 016501 193 -E-HEPV------NNLL-------DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 241 (388)
Q Consensus 193 -~-~~~~------~~L~-------eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFa 241 (388)
. .+.. ..+. +.+++ .|++|.++.- .=++-.|-.++.....|.|.+
T Consensus 96 ~~lNp~v~v~~~~~~~~~~~~~~~~~~~~--~DvVi~~~d~--~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 96 QELNSDVSGSFVEESPENLLDNDPSFFCR--FTVVVATQLP--ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HTTCTTSBCCEESSCHHHHHHSCGGGGGG--CSEEEEESCC--HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHhCCCCeEEEeCCCcchhhhhhHHHhcC--CCEEEEeCCC--HHHHHHHHHHHHHcCCCEEEE
Confidence 1 0111 2333 33444 8999987542 235566666666667898887
No 314
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=72.03 E-value=3.9 Score=37.28 Aligned_cols=32 Identities=25% Similarity=0.378 Sum_probs=24.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|+|.||+..|..|. +.|. ++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~-----~~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSA-----RKGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----TTTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHH-----HCCC-------cEEEEeCC
Confidence 57999999999999999883 2353 57777653
No 315
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=71.81 E-value=3.4 Score=40.06 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=29.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
+..|||+|||.+|+.+|-.|.. .|. ++|.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4679999999999999998832 463 379999987654
No 316
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=71.80 E-value=1.8 Score=40.81 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=59.2
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh---hhhhcc-ccCCCCCH
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF---KKPWAH-EHEPVNNL 200 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~---k~~~a~-~~~~~~~L 200 (388)
++..||+|.|| |--|-.+++.|.. .| .+++.++++.--...+...+... ...+.+ +-.+..+|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l 75 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAM 75 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHH
Confidence 44578999999 9999999988842 35 36888877530000000000000 011111 11223468
Q ss_pred HHHhcccCCcEEEEecCCCCC-CCHHHHHHHhcCC-CCcEEE
Q 016501 201 LDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 240 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~g~-ft~evi~~Ma~~~-~rPIIF 240 (388)
.++++..++|++|=+.+.... -+..+++.+.+.. -+-+|+
T Consensus 76 ~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 76 EKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 889985569999988765333 3788999988765 455554
No 317
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=71.76 E-value=3.2 Score=41.23 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=27.6
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
.+.+|+|+|||.||+..|..+. +.| .++.++|+..-
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La-----~~G-------~~V~llEk~~~ 61 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAG-----KRG-------RRVLVIDHARA 61 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHH-----HTT-------CCEEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHH-----HCC-------CcEEEEeCCCC
Confidence 3468999999999999998883 236 36999998653
No 318
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=71.73 E-value=3.7 Score=40.65 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=27.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|||.||+..|..+. +.| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~-----~~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAA-----QLG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-----HTT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHH-----HCC-------CeEEEEeCCC
Confidence 458999999999999998883 236 3699999873
No 319
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=71.60 E-value=3.6 Score=36.76 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=26.8
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|+|.+|+..|..|.. .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4679999999999999998832 35 468888875
No 320
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=71.59 E-value=5.4 Score=41.54 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=30.2
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+++.+|+|+|||.||+..|-.|.. .|+ +|.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 567899999999999999988832 363 6999999844
No 321
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=71.57 E-value=3.4 Score=38.73 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=26.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|||.+|+.+|..|.... ..| .++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999999883200 035 368899876
No 322
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=71.33 E-value=13 Score=35.03 Aligned_cols=101 Identities=14% Similarity=0.199 Sum_probs=61.9
Q ss_pred CccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccH-hhhhhcccc-C-CCCCH
Q 016501 125 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAHEH-E-PVNNL 200 (388)
Q Consensus 125 ~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~-~k~~~a~~~-~-~~~~L 200 (388)
+++..||+|.|| |--|..+++.|... .| -+|+.+|+.. ++...+.. .+..+.+-+ . +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 366789999995 89999999888432 23 4788888742 11111111 111222211 2 23457
Q ss_pred HHHhcccCCcEEEEecCCCC----------------CCCHHHHHHHhcCCCCcEEEecC
Q 016501 201 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 201 ~eav~~vkptvlIG~S~~~g----------------~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
.+++++ +|++|=+.+... .-|..+++.+.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 788886 999997665432 23567888888777 78998765
No 323
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=71.23 E-value=3.7 Score=41.21 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=27.8
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
...+|+|+|+|.||+..|..|.. .|. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~-----~G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA-----KGY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----HTC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecc
Confidence 45789999999999999999843 253 58999985
No 324
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=71.23 E-value=3.6 Score=41.06 Aligned_cols=38 Identities=18% Similarity=0.306 Sum_probs=27.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|||.||+..|..|... ...|++ ..++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~--~~~G~~----~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSA--QEKGAE----IPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--HHTTCC----CCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhh--hhcCCC----CCcEEEEEcC
Confidence 4899999999999999999431 114642 0138999886
No 325
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=71.16 E-value=4.2 Score=40.02 Aligned_cols=38 Identities=24% Similarity=0.307 Sum_probs=29.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
..+|||+|+|.||+..|..|. +.|.+ .+|.++|+..-+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~-----~~g~~-----~~V~lie~~~~~ 41 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLR-----ASGWE-----GNIRLVGDATVI 41 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHH-----HTTCC-----SEEEEECSCCSC
T ss_pred CCcEEEEcCHHHHHHHHHHHH-----ccCcC-----CCEEEEECCCCC
Confidence 468999999999999999883 24642 379999986543
No 326
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=71.10 E-value=3.6 Score=40.66 Aligned_cols=33 Identities=30% Similarity=0.304 Sum_probs=27.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|||.||+..|..|. +.| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~-----~~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAA-----QLG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-----HTT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHH-----hCC-------CeEEEEeCC
Confidence 468999999999999998883 236 369999986
No 327
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.02 E-value=10 Score=38.22 Aligned_cols=32 Identities=19% Similarity=0.190 Sum_probs=26.2
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.||.|+|+|..|..+|..|.. .| .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~-----~G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE-----LG-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHh-----cC-------CEEEEEECC
Confidence 589999999999999999843 35 368888875
No 328
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=70.96 E-value=20 Score=35.35 Aligned_cols=105 Identities=15% Similarity=0.192 Sum_probs=66.8
Q ss_pred CCcccc--cCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 96 THLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 96 ~~~~Fn--DDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
++||.| || +-=-.=+||=++.-.+-.| +|+..||+++|-|+ .+|+-++..+ .+.|+ +|.++=-+|
T Consensus 147 ~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~---nva~Sl~~~~-~~~G~-------~v~~~~P~~ 213 (340)
T 4ep1_A 147 SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDGN---NVCHSLLLAS-AKVGM-------HMTVATPVG 213 (340)
T ss_dssp SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCC---HHHHHHHHHH-HHHTC-------EEEEECCTT
T ss_pred CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCc---hhHHHHHHHH-HHcCC-------EEEEECCcc
Confidence 588888 44 2233456777777777766 49999999999982 3777774443 44575 688888777
Q ss_pred ccccCCCCCccHhhhhhcccc----CCCCCHHHHhcccCCcEEEEecCC
Q 016501 174 LIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSGV 218 (388)
Q Consensus 174 lv~~~r~~~l~~~k~~~a~~~----~~~~~L~eav~~vkptvlIG~S~~ 218 (388)
+.-. +.+-+.-+.+|+.. ....++.|+|++ +||+.-..=+
T Consensus 214 ~~~~---~~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 214 YRPN---EEIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp CCCC---HHHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred cCCC---HHHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 6321 11111223334331 123689999998 9999876543
No 329
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=70.94 E-value=3.7 Score=42.25 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.6
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|||+|||.||+..|..|.. .|+ +|.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999832 463 799999864
No 330
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=70.84 E-value=3.4 Score=38.45 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=26.9
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
...+|+|+|+|.||+..|..|.. .|+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAAR-----AQL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEecC
Confidence 45789999999999999998832 353 57888864
No 331
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=70.74 E-value=3.9 Score=39.26 Aligned_cols=35 Identities=14% Similarity=0.336 Sum_probs=26.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|||.||+..|..|. +.|. .-+|.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~-----~~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWR-----KLDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-----TTCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHH-----hhCC-----CCCEEEEECC
Confidence 467999999999999998882 3463 2368888765
No 332
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=70.70 E-value=3.5 Score=41.79 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=28.4
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|+|+|||.||+..|..|.. .| .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRA-----MG-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCCC
Confidence 35789999999999999998832 35 3699999875
No 333
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=70.60 E-value=4.2 Score=40.00 Aligned_cols=115 Identities=19% Similarity=0.199 Sum_probs=66.0
Q ss_pred CccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCC--CCCccHhhhhhccccCCCCCHH
Q 016501 125 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR--KDSLQHFKKPWAHEHEPVNNLL 201 (388)
Q Consensus 125 ~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r--~~~l~~~k~~~a~~~~~~~~L~ 201 (388)
+++-.||.|+|| |..|..++-+|...- =++..+. ..+.|+|...-+..-. .-+|++.--+.-.......+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~----l~~~~~~-~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGA----LLGPTTP-VELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTT----TTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhcc----ccCCCCc-cEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 466789999997 999999988884321 1221111 3688999742111000 0123322112211111235789
Q ss_pred HHhcccCCcEEEEecCCCCC--CC------------HHHHHHHhcCC-CCcEEEecCCCC
Q 016501 202 DAVKVIKPTILIGSSGVGRT--FT------------KEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g~--ft------------~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
+++++ .|++|=+.+.+.- -| +++.+.+++++ +.-+|+-.|||.
T Consensus 96 ~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 VAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCc
Confidence 99998 9999866554421 12 34556666665 566888999996
No 334
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=70.57 E-value=3.9 Score=39.96 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=27.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
.+|||+|||.||+..|..|.. . ..| .+|.++|++--
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~-~--~~g-------~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRN-L--MPD-------LKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-H--CTT-------CEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHc-C--CCC-------CeEEEECCCCC
Confidence 589999999999999999843 1 123 47899988643
No 335
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=70.47 E-value=4 Score=40.24 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=26.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|+|+|+|.||+..|..+.. .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999988832 35 3799999873
No 336
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=70.29 E-value=4.8 Score=33.53 Aligned_cols=34 Identities=6% Similarity=0.154 Sum_probs=27.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
...+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 45689999999999999999832 35 468889885
No 337
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=70.23 E-value=8.9 Score=35.60 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=58.2
Q ss_pred CCccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHH
Q 016501 124 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLL 201 (388)
Q Consensus 124 ~~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~ 201 (388)
++++..||+|.|| |--|..+++.|.. .| -+++.+|+.. ++ .++ .+.. +-.+..++.
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~-----~~~~~Dl~d~~~~~ 72 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGG-----EEVVGSLEDGQALS 72 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCC-----SEEESCTTCHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCc-----cEEecCcCCHHHHH
Confidence 4678899999998 8999999988843 35 3688887752 11 111 1111 112224578
Q ss_pred HHhcccCCcEEEEecCCCCCC--------------CHHHHHHHhcCCCCcEEEecC
Q 016501 202 DAVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g~f--------------t~evi~~Ma~~~~rPIIFaLS 243 (388)
+++++ +|++|=+.+....- |..+++.+.+..-+.|||.=|
T Consensus 73 ~~~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 73 DAIMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHHTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 88885 99999876643211 345788888776678898655
No 338
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=70.19 E-value=3.8 Score=40.62 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=27.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|+|.||+..|..+.. .| .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQ-----LG-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCC
Confidence 4679999999999999998832 35 3799999874
No 339
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=70.16 E-value=9.6 Score=36.34 Aligned_cols=57 Identities=25% Similarity=0.198 Sum_probs=36.1
Q ss_pred CccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 103 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 103 DiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
+.++.....++..+.+++..+.+ ..++|+|+|+|+.|...+.+. +..|. ++++.+|+
T Consensus 148 ~~~aa~~~~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~aiqla-----k~~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 148 FEEGALIEPLSVGIHACRRGGVT-LGHKVLVCGAGPIGMVTLLVA-----KAMGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHH-----HHTTC------SEEEEEES
T ss_pred HHHHHhhchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHH-----HHcCC------CEEEEECC
Confidence 34443333455556667655443 567999999998887776555 23463 47888875
No 340
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=69.99 E-value=3.9 Score=40.23 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
..+|||+|+|.||+..|..|... +- ..+|.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999998332 21 147999998753
No 341
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=69.85 E-value=3.8 Score=41.85 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=29.8
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
...+|||+|||.||+..|..|... ..| .+|.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL---SEE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh---CcC-------CCEEEEECCCCc
Confidence 457999999999999999998332 113 479999987654
No 342
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=69.78 E-value=5.2 Score=38.02 Aligned_cols=55 Identities=16% Similarity=0.058 Sum_probs=35.2
Q ss_pred ccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 104 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 104 iqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.|+...-.++.-+.+++..+. ..++|+|.|||..|..++.++ . ..|. ++++.+|+
T Consensus 146 ~~aa~~~~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a-~----~~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 146 EYATLQEPLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVA-K----ASGA------YPVIVSEP 200 (348)
T ss_dssp HHHTTHHHHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHH-H----HTTC------CSEEEECS
T ss_pred HHHHhhhHHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHH-H----HcCC------CEEEEECC
Confidence 344333344444566643333 889999999998888887666 2 2463 47887775
No 343
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=69.74 E-value=3.4 Score=37.62 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=24.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..|+|+|+|.||+..|..+. +.|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la-----~~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLG-----RSSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----HTTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEecC
Confidence 36999999999999997772 2463 57888874
No 344
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=69.65 E-value=13 Score=31.98 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=35.0
Q ss_pred CccchHH-HHHHHHHHHHHHhCCCccccEEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 103 DIQGTAS-VVLAGVVAALKLIGGTLAEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 103 DiqGTa~-V~lAgll~Al~~~g~~L~d~riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.++.+. +.++..+.+++-...--..+++++.| +|..|..++.++.. .| -+++.+|++
T Consensus 13 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G-------~~V~~~~~~ 72 (198)
T 1pqw_A 13 DNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM-----IG-------ARIYTTAGS 72 (198)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHH-----cC-------CEEEEEeCC
Confidence 3344333 34444555554333334678999999 58888888877732 35 258878763
No 345
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=69.64 E-value=3.7 Score=40.53 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=28.3
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
.+|||+|+|.||+..|..|... ..| .+|.++|+.--+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~---~~g-------~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK---YPQ-------AEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSS-------SEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCCC
Confidence 4899999999999999998432 113 479999987543
No 346
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=69.54 E-value=4.3 Score=41.03 Aligned_cols=34 Identities=18% Similarity=0.336 Sum_probs=27.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+.+|+|+|||.+|+..|-.|. +.|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La-----~~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELR-----LGGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHH-----HCCC-------CEEEEECC
Confidence 6789999999999999999883 2475 47777764
No 347
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=69.52 E-value=3.8 Score=39.17 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=25.1
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|+|+|||.||+..|-.|... ..| .++.++|+.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G-------~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPL-------WAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTT-------SEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCC-------CCEEEEECCC
Confidence 699999999999999988321 015 3577777653
No 348
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=69.50 E-value=4.4 Score=40.83 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=28.2
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|+|+|||.+|+..|..|. +.|+ ++.++|++-
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La-----~~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLA-----RQGV-------RVLVVERRP 38 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHH-----TTTC-------CEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHH-----HCCC-------CEEEEeCCC
Confidence 3578999999999999998883 3474 588888864
No 349
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=69.19 E-value=4.4 Score=36.44 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=55.7
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhccc
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 207 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~v 207 (388)
||+|.|| |--|..+++.|... ..| .+++.+|++. ++...+......+.+ +-.+..++.+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889997 88888888887321 013 3688887741 110111111111111 11222468888886
Q ss_pred CCcEEEEecCCCC----CCCHHHHHHHhcCCCCcEEEecC
Q 016501 208 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 208 kptvlIG~S~~~g----~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+|++|=+.+... ..++.+++.|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998776420 24678888888766567887544
No 350
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=69.16 E-value=4.1 Score=41.87 Aligned_cols=36 Identities=14% Similarity=0.108 Sum_probs=28.8
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|+|+|||.||+..|..|. ++.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~----~~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLH----HELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH----HTTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHH----HcCCC-------CEEEEECCC
Confidence 3578999999999999999883 13463 699999864
No 351
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=69.04 E-value=3.7 Score=40.48 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=26.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|||.||+..|..+.. .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 579999999999999988832 35 379999986
No 352
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=69.02 E-value=4.1 Score=39.45 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=27.5
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
...|+|+|||.+|+.+|..|... .-| .++.++|+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~---~pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQL---APG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH---CTT-------SCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhc---CCC-------CeEEEEeCCC
Confidence 36899999999999999988321 015 3699999863
No 353
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=68.72 E-value=4.9 Score=39.19 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=26.6
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|||.+|+..|..|. +.|.+ .+|.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~-----~~G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLS-----RAPCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHH-----TSSSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHH-----hCCCC-----CcEEEEeCC
Confidence 58999999999999999983 34631 278888875
No 354
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=68.63 E-value=4.6 Score=40.39 Aligned_cols=36 Identities=28% Similarity=0.427 Sum_probs=28.5
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.++.+||+|+|.|.+|+++|++|.. .| .++..+|.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~ 41 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGK 41 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 4678999999999999999998832 46 357777764
No 355
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=68.63 E-value=4.8 Score=39.14 Aligned_cols=33 Identities=24% Similarity=0.552 Sum_probs=27.1
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|||.+|+..|..|. +.| .++.++|+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~-----~~g-------~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLA-----EKG-------HQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-----TTT-------CEEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHH-----HCC-------CcEEEEEec
Confidence 468999999999999999983 234 578999885
No 356
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=68.44 E-value=4.5 Score=40.07 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=27.6
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|+|.||+..|..+.. .| .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LG-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999999832 36 3799999853
No 357
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=68.41 E-value=4.6 Score=38.39 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=26.5
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|+|+|||.+|+..|..|.. .|+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHK-----AGI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----HTC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 479999999999999998843 364 588888764
No 358
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=68.41 E-value=5 Score=37.09 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=28.4
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhc-CCChhhhcCcEEEEcCCCc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQT-KAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~-G~s~~eA~~~i~l~D~~Gl 174 (388)
.+..|+|+|+|.+|+..|..|. +. | .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la-----~~~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEIS-----KNPN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHH-----TSTT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHH-----HcCC-------CeEEEEECCCC
Confidence 4568999999999999998883 23 5 36889998743
No 359
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=68.37 E-value=7.3 Score=35.26 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=58.6
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhccc
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 207 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~v 207 (388)
||+|.|| |--|..+++.|.. +.| .+++.++++.- +...+......+.+ +-.+..+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 8889999888732 124 46777776521 11112111122222 11223468889987
Q ss_pred CCcEEEEecCCCCC------CCHHHHHHHhcCCCCcEEEecC
Q 016501 208 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 208 kptvlIG~S~~~g~------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
.|++|=+.+.... -++.+++.|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999987764321 2467888888766677888544
No 360
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=68.31 E-value=4.7 Score=39.73 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=27.1
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|||.||+..|..+.. .| .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~-----~g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQ-----LG-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----HT-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCC
Confidence 4679999999999999988833 25 379999987
No 361
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=68.26 E-value=7.7 Score=36.72 Aligned_cols=91 Identities=23% Similarity=0.384 Sum_probs=49.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 208 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vk 208 (388)
+||-|+|-|..|.++|+.|.. .|. +++.+|+. .++.+.+.+. -+ ....|+.|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~-----~G~-------~V~v~dr~----~~~~~~l~~~---G~---~~~~s~~e~~~~-- 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLE-----AGY-------ELVVWNRT----ASKAEPLTKL---GA---TVVENAIDAITP-- 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-----TTC-------EEEEC-----------CTTTTT---TC---EECSSGGGGCCT--
T ss_pred CcEEEEecHHHHHHHHHHHHH-----CCC-------eEEEEeCC----HHHHHHHHHc---CC---eEeCCHHHHHhc--
Confidence 589999999999999999943 363 57888863 2221222211 11 123567777766
Q ss_pred CcEEEEecCCC----CCCCHHHHHHHhcCCCCcEEEecCCCC
Q 016501 209 PTILIGSSGVG----RTFTKEVIEAMASFNEKPLILALSNPT 246 (388)
Q Consensus 209 ptvlIG~S~~~----g~ft~evi~~Ma~~~~rPIIFaLSNPt 246 (388)
.|++|=+-.-+ ..+..+++..+. +.-||.=+|+=.
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~---~~~iiid~sT~~ 100 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLG---KDGVHVSMSTIS 100 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHC---TTCEEEECSCCC
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcC---CCeEEEECCCCC
Confidence 77776432211 123334444443 444666666543
No 362
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.90 E-value=4.2 Score=40.84 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|+|+|||.||+..|..+.. .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999999832 35 4699999874
No 363
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=67.84 E-value=5.2 Score=39.88 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=27.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..|+|+|||.||+..|..|.. .| .++.++|++
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999998832 36 469999984
No 364
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=67.79 E-value=7.3 Score=37.98 Aligned_cols=90 Identities=8% Similarity=0.093 Sum_probs=48.9
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc-
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 207 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v- 207 (388)
.||.|+|+|..|..+|..|.. .| .+|+.+|++- +.+...+.. .-....++.++++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~-----~G-------~~V~~~dr~~-------~~~~~a~~~---G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHA-----AN-------HSVFGYNRSR-------SGAKSAVDE---GFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSCH-------HHHHHHHHT---TCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHH-----CC-------CEEEEEeCCH-------HHHHHHHHc---CCeeeCCHHHHHHhcc
Confidence 589999999999999999832 35 3688888741 111111100 001124566665531
Q ss_pred -CCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEec
Q 016501 208 -KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 242 (388)
Q Consensus 208 -kptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaL 242 (388)
.+|++| ++... ..++++++.++.+.+.-||.=.
T Consensus 67 ~~aDlVi-lavP~-~~~~~vl~~l~~~~~~~iv~Dv 100 (341)
T 3ktd_A 67 AEDALIV-LAVPM-TAIDSLLDAVHTHAPNNGFTDV 100 (341)
T ss_dssp HTTCEEE-ECSCH-HHHHHHHHHHHHHCTTCCEEEC
T ss_pred cCCCEEE-EeCCH-HHHHHHHHHHHccCCCCEEEEc
Confidence 356666 33332 2455666666544344444433
No 365
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=67.79 E-value=13 Score=34.57 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=59.5
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccH-hhhhhcc-ccCCCCCHHH
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHEPVNNLLD 202 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~-~k~~~a~-~~~~~~~L~e 202 (388)
++..+|+|.|| |--|..+++.|.. .| .+++.+|++.- ...+.+.. .+..+.. +-.+..++.+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~l~~~~~~~~~~~Dl~d~~~~~~ 83 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFAT---GRREHLKDHPNLTFVEGSIADHALVNQ 83 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCGGGSCCCTTEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCCc---cchhhHhhcCCceEEEEeCCCHHHHHH
Confidence 55678999985 8888888888832 35 46888887521 11011111 0111111 1122245778
Q ss_pred HhcccCCcEEEEecCCCCC-------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 203 AVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 203 av~~vkptvlIG~S~~~g~-------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+++..++|++|=+.+.... -+..+++.+.+..-+.|||.=|
T Consensus 84 ~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 84 LIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 8887789999987765432 0345677776655567888544
No 366
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=67.74 E-value=4.5 Score=40.82 Aligned_cols=37 Identities=14% Similarity=0.260 Sum_probs=28.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
.||||+|||.||+..|..|.. .|- ..+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~-----~~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARR-----LSE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-----HCS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHh-----hCc-----CCCEEEEECCCCc
Confidence 489999999999999999833 221 2479999987543
No 367
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.61 E-value=4.3 Score=40.50 Aligned_cols=37 Identities=14% Similarity=0.318 Sum_probs=28.5
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
.+|||+|+|.||+..|..|... ..| .++.++|+....
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~---~~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRN---DEN-------ANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CTT-------CEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCCCC
Confidence 5899999999999999998331 013 479999987543
No 368
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=67.56 E-value=4.1 Score=39.81 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=28.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhc-CcEEEEcCCCc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR-KKICLVDSKGL 174 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~-~~i~l~D~~Gl 174 (388)
..+|+|+|||.||+..|..|... |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 35799999999999999999432 31 000 47999998753
No 369
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=67.49 E-value=4.5 Score=40.70 Aligned_cols=35 Identities=17% Similarity=0.479 Sum_probs=28.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|+|+|||.||+..|..|. +.|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La-----~~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVA-----MRGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH-----TTTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHH-----hCCC-------CEEEEccCC
Confidence 4568999999999999998883 3463 688999875
No 370
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=67.43 E-value=14 Score=36.76 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=25.4
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
||.|+|+|..|..+|..|.. .| .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~-----~G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA-----RG-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH-----TT-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEECC
Confidence 79999999999999999843 35 368888874
No 371
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=67.37 E-value=5 Score=36.57 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=57.7
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhcc
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~ 206 (388)
.||+|.|| |--|..+++.|... ..| .+++.+|++. .. ..+.+ +..+.+ +-.+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 88899998888432 012 4688888641 11 11111 111211 11222467888886
Q ss_pred cCCcEEEEecCCCCC---------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 207 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 207 vkptvlIG~S~~~g~---------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
.++|++|=+.+.... -|..+++.+.+..-+.+||.=|
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 679999988764321 1335677777655567887533
No 372
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=67.31 E-value=33 Score=33.23 Aligned_cols=135 Identities=13% Similarity=0.142 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHhCCCeeeeeccCCCchHHHHHHHHcCCCcccc--cCccchHHHHHHHHHHHHHHhCCCcc-ccEEEEeC
Q 016501 59 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLG 135 (388)
Q Consensus 59 vdefv~av~~~fGp~~~I~~EDf~~~~af~iL~ryr~~~~~Fn--DDiqGTa~V~lAgll~Al~~~g~~L~-d~riv~~G 135 (388)
+...++.+. +| ..+ |-+-.++ +.+.+.|.+|- ++||.| || +-=-.=+||=++.-.+-.| +|+ ..||.++|
T Consensus 81 l~DTarvls-~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVIG-AM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHHH-HH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTTC-CGGGCCEEEEES
T ss_pred HHHHHHHHH-Hh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEc
Confidence 334444433 44 332 4344444 34555566654 689998 54 3333456777777666555 799 99999999
Q ss_pred cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc----CCCCCHHHHhcccCCcE
Q 016501 136 AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTI 211 (388)
Q Consensus 136 AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~----~~~~~L~eav~~vkptv 211 (388)
-++ -+|+-++..+ .+.|+ +|.++--+|+.-. +.+-+..+.+|+.. ....++.|++++ +||
T Consensus 154 D~~---~va~Sl~~~~-~~~G~-------~v~~~~P~~~~~~---~~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITA-AILGF-------EISIAMPKNYKIS---PEIWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHH-HHHTC-------EEEEECCTTCCCC---HHHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHH-HHcCC-------EEEEECCCccCCC---HHHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 974 3777774443 45574 6888888776321 11111223333331 123689999998 999
Q ss_pred EEEec
Q 016501 212 LIGSS 216 (388)
Q Consensus 212 lIG~S 216 (388)
+.-..
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98654
No 373
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=67.29 E-value=9.5 Score=35.06 Aligned_cols=101 Identities=15% Similarity=0.240 Sum_probs=57.3
Q ss_pred cccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCC--CccHh----hhhhcc-ccCCCC
Q 016501 127 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 198 (388)
Q Consensus 127 ~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~--~l~~~----k~~~a~-~~~~~~ 198 (388)
++.+|+|.|| |--|..+++.|.. .| .+++.+|++. ++.. .+... +..+.+ +-.+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4578999998 8888888888832 35 3688888752 1100 01100 011111 111224
Q ss_pred CHHHHhcccCCcEEEEecCCCCC------C----------CHHHHHHHhcCCC-CcEEEecC
Q 016501 199 NLLDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 243 (388)
Q Consensus 199 ~L~eav~~vkptvlIG~S~~~g~------f----------t~evi~~Ma~~~~-rPIIFaLS 243 (388)
++.++++.+++|++|=+.+.... + |..+++.+.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888789999988765321 0 3345555554433 67887644
No 374
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=67.16 E-value=4.5 Score=40.87 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=27.7
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.-++.+|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3467789999999999999998833 464 46677764
No 375
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=67.03 E-value=15 Score=33.55 Aligned_cols=93 Identities=12% Similarity=0.181 Sum_probs=58.6
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhcc
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~ 206 (388)
.||+|.|| |--|..+++.|.. .| .+++.+|+. .++.+ +. ...+.. +-. ..++.+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~~ 62 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLND 62 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhcC
Confidence 58999995 8899999988843 35 368888886 22212 22 112221 112 3467788874
Q ss_pred cCCcEEEEecCCCCC------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 207 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 207 vkptvlIG~S~~~g~------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+|++|=+.+..+. -+..+++.+.+..-+.+||.=|
T Consensus 63 --~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 63 --VDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp --CSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred --CCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 9999988765422 1467888888766666888544
No 376
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=67.02 E-value=5.1 Score=40.74 Aligned_cols=35 Identities=20% Similarity=0.312 Sum_probs=28.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|+|+|||.+|+..|..|. +.|+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~-----~~G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLR-----ELGR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHH-----hCCC-------CEEEEeCCC
Confidence 4578999999999999999983 2364 688999864
No 377
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=66.98 E-value=5 Score=39.76 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=27.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..|+|+|||.||+..|..+.. .| .++.++|+++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCC
Confidence 4579999999999999998832 36 4799999654
No 378
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=66.89 E-value=4.1 Score=40.65 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=26.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
.+|||+|+|.||...|-.|.... ..| -+|.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~--~~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAF--DDR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHH--GGG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhc--CCC-------CEEEEEecCCC
Confidence 47999999999999999994321 035 36899998644
No 379
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=66.89 E-value=8.6 Score=35.23 Aligned_cols=78 Identities=13% Similarity=0.157 Sum_probs=44.8
Q ss_pred CccccEEEEeCcc-h--HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc------ccC
Q 016501 125 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 195 (388)
Q Consensus 125 ~L~d~riv~~GAG-s--Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~------~~~ 195 (388)
.+++.+++|.||. . -|.++|+.|.. +| -+++++|++-+ . +.+...+..+.+ +-.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999974 4 67777777732 35 36888888640 0 112222221111 111
Q ss_pred CCCCHHHHhccc-----CCcEEEEecCCC
Q 016501 196 PVNNLLDAVKVI-----KPTILIGSSGVG 219 (388)
Q Consensus 196 ~~~~L~eav~~v-----kptvlIG~S~~~ 219 (388)
+..++.++++.+ +.|+||=..+..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 123456666554 689999777654
No 380
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=66.85 E-value=5.1 Score=40.06 Aligned_cols=34 Identities=15% Similarity=0.386 Sum_probs=26.5
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|+|+|||.||+..|..|.. .| .+|.++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~-----~G-------~~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHD-----SG-------LNVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCCC
Confidence 4579999999999999999932 35 3677777753
No 381
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=66.82 E-value=4.5 Score=45.36 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=61.0
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccC---CC-----CCccHhhhhhcc---
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RK-----DSLQHFKKPWAH--- 192 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~---r~-----~~l~~~k~~~a~--- 192 (388)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+=+ ..+ |+ +++-..|..-+.
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D~V-~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L 90 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPEPV-QLADLSTQFFLTEKDIGQKRGDVTRAKL 90 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCSBC-CGGGGGTCTTCCGGGTTSBHHHHHHHHH
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCCEe-chhhhccccccChhhcChHHHHHHHHHH
Confidence 358899999999999999999999543 86 79999998732 221 10 111111211111
Q ss_pred -cc-CCC------CCH-HHHhcccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEEec
Q 016501 193 -EH-EPV------NNL-LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 242 (388)
Q Consensus 193 -~~-~~~------~~L-~eav~~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIFaL 242 (388)
+. +.. ..| .+.+++ .|++|-++.. ..=++-.|..++.....|+|.+.
T Consensus 91 ~~lNP~v~v~~~~~~l~~~~l~~--~DvVv~~~d~-~~~~r~~ln~~c~~~~iplI~~~ 146 (1015)
T 3cmm_A 91 AELNAYVPVNVLDSLDDVTQLSQ--FQVVVATDTV-SLEDKVKINEFCHSSGIRFISSE 146 (1015)
T ss_dssp TTSCTTSCEEECCCCCCSTTGGG--CSEEEECTTS-CHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHCCCCeEEEecCCCCHHHHhc--CCEEEEcCCC-CHHHHHHHHHHHHHcCCCEEEEE
Confidence 10 100 111 134444 7888865430 12345566666666678998875
No 382
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=66.78 E-value=4.8 Score=40.50 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=29.6
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
...+|||+|+|.||+..|..|... +. ..+|.++|+..-+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~~ 48 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPEL 48 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCCC
Confidence 457899999999999999988322 21 2579999987543
No 383
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=66.66 E-value=5 Score=39.37 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=26.7
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|+|+|||.||+..|-.|.. .|+ ++.++|+.-
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~-----~G~-------~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQ-----HDV-------DVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHH-----TTC-------EEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CCC-------eEEEEcCCC
Confidence 579999999999999988832 464 688898753
No 384
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=66.66 E-value=5.2 Score=36.82 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=25.1
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.--++|+|+|.||+..|-.+. +.| .++.++|+.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~la-----r~g-------~~v~lie~~ 38 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLG-----RAR-------KQIALFDNN 38 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHH-----HTT-------CCEEEEECS
T ss_pred CCcCEEEECCCHHHHHHHHHHH-----HCC-------CCEEEEeCC
Confidence 3445899999999999886652 345 468899975
No 385
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=66.57 E-value=55 Score=31.64 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=80.3
Q ss_pred HHhCCCeeeeeccCCCchHHHHHHHHcCCCcccc--c--CccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHH
Q 016501 68 QNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--D--DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGI 143 (388)
Q Consensus 68 ~~fGp~~~I~~EDf~~~~af~iL~ryr~~~~~Fn--D--DiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~gi 143 (388)
.+| .. +|-+-.++ +.+.+.+.+|-.++||.| | ..|=| =+||=++.-.+-.| +|++.||+++|-|.= --+
T Consensus 96 s~~-~D-~iviR~~~-~~~~~~la~~~~~vPVINag~G~~~HPt--QaLaDl~Ti~e~~g-~l~gl~va~vGD~~~-~rv 168 (310)
T 3csu_A 96 STY-VD-AIVMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPT--QTLLDLFTIQETQG-RLDNLHVAMVGDLKY-GRT 168 (310)
T ss_dssp TTT-CS-EEEEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHH--HHHHHHHHHHHHHS-CSSSCEEEEESCTTT-CHH
T ss_pred HHh-CC-EEEEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCch--HHHHHHHHHHHHhC-CcCCcEEEEECCCCC-Cch
Confidence 456 33 34455554 455666778765799999 4 45555 46777777766665 799999999999742 125
Q ss_pred HHHHHHHHHHhc-CCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc----CCCCCHHHHhcccCCcEEEEecC
Q 016501 144 AELIALEISKQT-KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 217 (388)
Q Consensus 144 A~ll~~~~~~~~-G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~----~~~~~L~eav~~vkptvlIG~S~ 217 (388)
|+-++.. +.+. |+ +|.++--+|+-- ++.-..++++. ....++.|++++ +||+.-..-
T Consensus 169 a~Sl~~~-~~~~~g~-------~v~~~~P~~~~~-------~~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~ 230 (310)
T 3csu_A 169 VHSLTQA-LAKFDGN-------RFYFIAPDALAM-------PQYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRV 230 (310)
T ss_dssp HHHHHHH-HHTSSSC-------EEEEECCGGGCC-------CHHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC-
T ss_pred HHHHHHH-HHhCCCC-------EEEEECCccccc-------CHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCc
Confidence 6666444 3455 74 688888887722 22222333321 123689999998 999997653
No 386
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=66.57 E-value=5.1 Score=37.50 Aligned_cols=37 Identities=30% Similarity=0.592 Sum_probs=28.6
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+.-|+|+|||+||+..|..|.. .+.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~---~r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAK---NRPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHH---HCTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHH---hCCCC-------eEEEEECC
Confidence 356779999999999999998842 23463 68899875
No 387
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=66.55 E-value=4.6 Score=39.74 Aligned_cols=34 Identities=12% Similarity=0.233 Sum_probs=27.0
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|||+|+|.||+..|..|... ..| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~---~~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIAD---HPD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhh---CcC-------CcEEEEECCC
Confidence 699999999999999999432 113 5799999875
No 388
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=66.45 E-value=5.8 Score=39.21 Aligned_cols=35 Identities=23% Similarity=0.437 Sum_probs=28.3
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
-...+|+|+|||.+|+..|..|.. .| .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~-----~G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTR-----AG-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHH-----TS-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEecc
Confidence 356799999999999999999832 36 368888876
No 389
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=66.39 E-value=5.8 Score=39.14 Aligned_cols=32 Identities=16% Similarity=0.329 Sum_probs=25.5
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|||.||+..|..|.. .| .++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~-----~g-------~~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV-----AG-------FKTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 699999999999999999832 35 357777765
No 390
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=66.38 E-value=5.4 Score=38.73 Aligned_cols=35 Identities=14% Similarity=0.359 Sum_probs=27.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+.+|+|+|||.||+..|..|.. .| .++.+++++.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~-----~g-------~~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRK-----AG-------LSVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEECCC
Confidence 35689999999999999999832 35 3588888763
No 391
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=66.37 E-value=5.6 Score=41.82 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=27.8
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|||+|+|.||+..|..|.. .| .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~-----~G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGV-----RG-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----HT-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999999943 25 3699999863
No 392
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=66.35 E-value=5.3 Score=40.02 Aligned_cols=23 Identities=30% Similarity=0.484 Sum_probs=20.2
Q ss_pred ccccEEEEeCcchHHHHHHHHHH
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIA 148 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~ 148 (388)
....+|+|+|||.||+..|..|.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~ 28 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLH 28 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHH
Confidence 34678999999999999999994
No 393
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=66.26 E-value=4.3 Score=39.89 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=27.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+.+|+|+|||.||+..|..+.. .| .++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G-------~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LG-------KSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CC-------CCEEEEeCCCC
Confidence 4579999999999999988832 36 36999998653
No 394
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=66.23 E-value=6.3 Score=39.61 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 170 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D 170 (388)
+.+|+|+|||.||+..|..+... .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999998430 25 4799999
No 395
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=66.22 E-value=5.3 Score=39.76 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=27.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|||.||+..|..+. +.| .++.++|++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~-----~~G-------~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAA-----DEG-------LKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHH-----HTT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHH-----hCC-------CeEEEEeCCC
Confidence 468999999999999998873 236 3699999853
No 396
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=66.06 E-value=4.4 Score=37.84 Aligned_cols=34 Identities=21% Similarity=0.498 Sum_probs=28.0
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..+|+|+|||.+|+.+|..|. .| .++.++|+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La------~G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS------AH-------GRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT------TT-------SCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh------CC-------CCEEEEECCC
Confidence 4678999999999999999882 26 3699999873
No 397
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=66.04 E-value=4.8 Score=39.54 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=27.2
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+|||+|+|.||+..|..|... ..| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~---~~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNL---HPD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHH---CTT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHh---CcC-------CeEEEEECCCc
Confidence 799999999999999998432 013 57999998753
No 398
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=65.91 E-value=5.6 Score=40.21 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=28.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|||+|||.||+..|-.|.... ..| -+|.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~--~~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRAL--QQQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC--CSS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc--CCC-------CEEEEECCCC
Confidence 468999999999999999984310 035 3689999854
No 399
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=65.78 E-value=5.5 Score=39.07 Aligned_cols=34 Identities=29% Similarity=0.410 Sum_probs=25.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..|+|+|||-+|+..|..|.. ..| .++.+++++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k----~~G-------~~V~VlE~~ 43 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQ----IDG-------PSWMIVDSN 43 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH----HCC-------SCEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHh----hCC-------CCEEEEECC
Confidence 4579999999999999999843 235 356666664
No 400
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=65.76 E-value=5.6 Score=40.13 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=29.1
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
...+|+|+|||.||+..|..|.. .| .++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G-------~~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LG-------ARVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CC-------CeEEEEEecccc
Confidence 35789999999999999998832 46 368899987443
No 401
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.59 E-value=6.1 Score=38.72 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=27.5
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|||+|+|.||+..|..|.... ..| .+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~--~~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEAL--GSG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHH--GGG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccC--CCc-------CEEEEEeCCC
Confidence 58999999999999999994422 123 4688888764
No 402
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=65.55 E-value=4.6 Score=40.46 Aligned_cols=36 Identities=28% Similarity=0.503 Sum_probs=27.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.+|||+|||.||+..|..|... ...| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~--~~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATS--HPET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--CTTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCc-------CEEEEEeCCC
Confidence 5799999999999999998321 0014 3799999874
No 403
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=65.45 E-value=5.7 Score=40.47 Aligned_cols=39 Identities=23% Similarity=0.383 Sum_probs=29.2
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+..+|||+|||.||...|..|.... ..| -+|.++|+.-.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~--~~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKAL--QGT-------ADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--TTS-------SEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhc--CCC-------CcEEEEeCCCC
Confidence 3568999999999999999984321 034 47999998644
No 404
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=65.41 E-value=5.4 Score=40.08 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=27.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..|+|+|||.+|+++|..|.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999999843 364 599999864
No 405
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=65.18 E-value=4.8 Score=40.16 Aligned_cols=119 Identities=13% Similarity=0.013 Sum_probs=67.6
Q ss_pred ccEEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc--CCCc---cccCCCCCccHhhhhhccccCCCCCHH
Q 016501 128 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLL 201 (388)
Q Consensus 128 d~riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D--~~Gl---v~~~r~~~l~~~k~~~a~~~~~~~~L~ 201 (388)
..||.|+| +|..|..+|-+|+. .++-- | ...+.|+| .+.. +.-. .-+|++..-+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~-----~~l~~-e-~~~l~L~d~d~~~~~~~~~G~-amDL~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLAS-----GEVFG-Q-DQPIALKLLGSERSFQALEGV-AMELEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHH-----TTTTC-T-TCCEEEEEECCGGGHHHHHHH-HHHHHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHc-----CCcCC-C-CceeEEEecCccchhhhhHHH-HHhHHhhhhhhcCCcEEecCCH
Confidence 47999999 79999999888843 24410 0 11255544 3211 0000 0123333334443322234678
Q ss_pred HHhcccCCcEEEEecCCC---CC-----------CCHHHHHHHhcC-CCCcEEEecCCCCCCCCCCHHHHhcc
Q 016501 202 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASF-NEKPLILALSNPTSQSECTAEEAYTW 259 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~---g~-----------ft~evi~~Ma~~-~~rPIIFaLSNPt~~~E~tpe~A~~~ 259 (388)
+++++ .|++|=+.+.+ |- +=+++.+.+.++ ++.-||+-.|||. .+...-+++.
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv---D~~t~ia~k~ 171 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC---NTNALICLKN 171 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHT
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch---hHHHHHHHHH
Confidence 89988 99888554433 21 123455567776 7899999999996 3444444443
No 406
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=65.10 E-value=5.9 Score=39.57 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=28.5
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|||+|||.||+..|..|... |. ...+|.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999999432 20 125799999864
No 407
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=64.97 E-value=4.3 Score=39.93 Aligned_cols=35 Identities=37% Similarity=0.462 Sum_probs=27.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+.+|+|+|||.||+..|..|. +.|+ ++.++|++-.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La-----~~G~-------~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLS-----RRGL-------KILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHS-----SSSC-------CEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHH-----HCCC-------CEEEEECCCC
Confidence 357999999999999998882 3463 5888887643
No 408
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=64.83 E-value=11 Score=33.90 Aligned_cols=92 Identities=14% Similarity=0.176 Sum_probs=55.6
Q ss_pred CccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHH
Q 016501 125 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLD 202 (388)
Q Consensus 125 ~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~e 202 (388)
.++..||+|.|| |--|..+++.|.. .|- + .........+.+ +-.+..++.+
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~---------------------~-~~~~~~~~~~~~~D~~d~~~~~~ 55 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAG---------------------L-PGEDWVFVSSKDADLTDTAQTRA 55 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTC---------------------C-TTCEEEECCTTTCCTTSHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCC---------------------c-ccccccccCceecccCCHHHHHH
Confidence 467789999996 8889999888832 342 0 000000000101 1111245888
Q ss_pred HhcccCCcEEEEecCCCCC-----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 203 AVKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 203 av~~vkptvlIG~S~~~g~-----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+++..++|++|=+.+..+. -|..+++.+.+..-+.+||.=|
T Consensus 56 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 56 LFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 8888889999988765431 1234688887766667888544
No 409
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=64.60 E-value=6.6 Score=38.80 Aligned_cols=33 Identities=21% Similarity=0.422 Sum_probs=26.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..|+|+|||.||+..|..|. +.| .++.++|+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la-----~~G-------~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAA-----ALG-------KKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHH-----TTT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHH-----hCC-------CEEEEEeCC
Confidence 457999999999999998883 236 469999984
No 410
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=64.60 E-value=12 Score=34.10 Aligned_cols=87 Identities=14% Similarity=0.145 Sum_probs=55.0
Q ss_pred ccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcc
Q 016501 128 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 206 (388)
Q Consensus 128 d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~ 206 (388)
..||+|.|| |--|..+++.|. +.| .+++.+++. .. -++. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~-----~~g-------~~v~~~~r~-----~~-~D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLE-----QRG-------DVELVLRTR-----DE-LNLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHT-----TCT-------TEEEECCCT-----TT-CCTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----hCC-------CeEEEEecC-----cc-CCcc-----------CHHHHHHHHHh
Confidence 468999996 888888888873 234 246666543 11 1121 12357778875
Q ss_pred cCCcEEEEecCCCCC-----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 207 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 207 vkptvlIG~S~~~g~-----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+++|++|=+.+..+. -|..+++.+.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988765431 1345677776655567888654
No 411
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=64.51 E-value=6.9 Score=36.13 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=29.4
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+|++.++||+|+|..|..-+++|.. .| .+|.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~-----~G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQ-----EG-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGG-----GC-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHH-----CC-------CEEEEECCC
Confidence 5789999999999999999998833 35 468888864
No 412
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=64.40 E-value=6 Score=42.09 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=27.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|+|+|||.||+..|..|.. .| .++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 4689999999999999999832 35 3699999863
No 413
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=64.36 E-value=14 Score=35.36 Aligned_cols=49 Identities=16% Similarity=0.186 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 111 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 111 ~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.....+.+++..+.....++|+|.|+|..|..++.++ . ..| -+++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a-~----~~G-------a~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFA-K----AFG-------SKVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHH-H----HTT-------CEEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHH-H----HCC-------CEEEEEeC
Confidence 3344456777666555789999999998888777666 2 246 25887775
No 414
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=64.31 E-value=6.2 Score=39.84 Aligned_cols=39 Identities=31% Similarity=0.413 Sum_probs=28.9
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHH--------hcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISK--------QTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~--------~~G~s~~eA~~~i~l~D~~G 173 (388)
...+|||+|+|.||...|-.|.... . ..|+ +|.++++.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~-~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEH-NVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHH-HEETTEECSSCSC-------EEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhh-ccccccccCCCCC-------eEEEEeCCC
Confidence 3568999999999999999994421 1 0453 688999864
No 415
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=64.07 E-value=14 Score=32.70 Aligned_cols=101 Identities=20% Similarity=0.159 Sum_probs=56.4
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHH
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 203 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~ea 203 (388)
..-.+|+|.|| |--|..+++.|. +.| .-++++++++.- +...+......+.+ +-.+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~-----~~G------~~~V~~~~R~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLA-----DKQ------TIKQTLFARQPA----KIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHT-----TCT------TEEEEEEESSGG----GSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHH-----hCC------CceEEEEEcChh----hhcccccCCcEEEEecCCCHHHHHHH
Confidence 34568999995 788888888873 234 136787777521 11111111111111 11223468888
Q ss_pred hcccCCcEEEEecCCCCC--CCHHHHHHHhcCCCCcEEEecC
Q 016501 204 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~--ft~evi~~Ma~~~~rPIIFaLS 243 (388)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966543322 2566777777655445666444
No 416
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=64.03 E-value=5.3 Score=39.57 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=27.5
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+.+|+|+|+|.||+..|..+.. .| .++.++|++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~-----~G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAE-----LG-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEecC
Confidence 45689999999999999998832 35 469999965
No 417
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=63.86 E-value=6.6 Score=36.74 Aligned_cols=38 Identities=24% Similarity=0.191 Sum_probs=26.7
Q ss_pred EEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 130 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 130 riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
.|+|+|||.+|+.+|-.|... |.+. --..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~-~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV-LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT-SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc-CCCceEEEEECCC
Confidence 689999999999999888432 3100 0014799999873
No 418
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=63.76 E-value=6 Score=38.66 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=25.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+.+|+|+|||.+|+..|..|. +.|. ++.++++..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~-----~~g~-------~v~v~E~~~ 49 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLR-----SRGT-------DAVLLESSA 49 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHH-----TTTC-------CEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHH-----HCCC-------CEEEEEcCC
Confidence 457999999999999999883 2353 577777653
No 419
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=63.71 E-value=17 Score=36.78 Aligned_cols=91 Identities=15% Similarity=0.190 Sum_probs=0.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhh-----------------h
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-----------------W 190 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~-----------------~ 190 (388)
..||.|+|+|.-|..+|..|... | .+++++|++ .+.+...++. .
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~-------~~kv~~l~~g~~~~~epgl~~~~~~~~~ 68 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD-------ARKIELLHQNVMPIYEPGLDALVASNVK 68 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC-------STTHHHHTTTCCSSCCTTHHHHHHHHHH
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC-------HHHHHHHhcCCCCccCCCHHHHHHhhcc
Q ss_pred ccccCCCCCHHHHhcccCCcEEEEec--CCCCC--------CCHHHHHHHhcCCCCcEEE
Q 016501 191 AHEHEPVNNLLDAVKVIKPTILIGSS--GVGRT--------FTKEVIEAMASFNEKPLIL 240 (388)
Q Consensus 191 a~~~~~~~~L~eav~~vkptvlIG~S--~~~g~--------ft~evi~~Ma~~~~rPIIF 240 (388)
...-.-..++.|+++. +|++| ++ +.... +-+++++.++++-+..-|+
T Consensus 69 ~g~l~~ttd~~ea~~~--aDvvi-i~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iV 125 (446)
T 4a7p_A 69 AGRLSFTTDLAEGVKD--ADAVF-IAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVI 125 (446)
T ss_dssp TTCEEEESCHHHHHTT--CSEEE-ECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEE
T ss_pred cCCEEEECCHHHHHhc--CCEEE-EEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEE
No 420
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=63.70 E-value=5.7 Score=38.73 Aligned_cols=34 Identities=24% Similarity=0.466 Sum_probs=27.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|||.+|+..|..|... .| .++.++++.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~----~g-------~~v~v~E~~ 40 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQ----LD-------KRVLVLERR 40 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHH----SC-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHh----CC-------CCEEEEeCC
Confidence 56899999999999999998321 14 478888876
No 421
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=63.69 E-value=8.2 Score=36.69 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 111 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 111 ~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.++.-+.|++..+.+ ..++|+|+|||..|...+.+. +..|. ++|+.+|+
T Consensus 151 ~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla-----~~~Ga------~~Vi~~~~ 199 (352)
T 3fpc_A 151 MMTTGFHGAELANIK-LGDTVCVIGIGPVGLMSVAGA-----NHLGA------GRIFAVGS 199 (352)
T ss_dssp HHHHHHHHHHHTTCC-TTCCEEEECCSHHHHHHHHHH-----HTTTC------SSEEEECC
T ss_pred hhHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHH-----HHcCC------cEEEEECC
Confidence 445556667655443 578899999997777665554 33463 57888876
No 422
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=63.57 E-value=15 Score=33.88 Aligned_cols=97 Identities=19% Similarity=0.131 Sum_probs=55.0
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc-CCCCCHHHHhcc
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~-~~~~~L~eav~~ 206 (388)
.||+|.|| |--|..+++.|.. .| .+++.+|++. ++.+.+...+..+.+-+ .+..++.+++++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 8889999888843 35 4688888742 11111221111122111 222467888886
Q ss_pred cCCcEEEEecCCCCCC--------------CHHHHHHHhcCCCCcEEEecC
Q 016501 207 IKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 207 vkptvlIG~S~~~g~f--------------t~evi~~Ma~~~~rPIIFaLS 243 (388)
+|++|=+.+..+.. +..+++.+.+..-+.+||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999877653311 346777777655567887544
No 423
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=63.51 E-value=5.5 Score=39.44 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=26.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|+|.||+..|..+.. .| .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQ-----LG-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----HT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEccC
Confidence 4579999999999999988832 25 479999984
No 424
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=63.44 E-value=7.4 Score=34.86 Aligned_cols=81 Identities=16% Similarity=0.171 Sum_probs=45.8
Q ss_pred CCCccccEEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc------c
Q 016501 123 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------E 193 (388)
Q Consensus 123 g~~L~d~riv~~GAG---sAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~------~ 193 (388)
..++++.++||.||+ .-|.++|+.|.. +| -+++++|++.- .. +.+......+.+ +
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~~~---~~-~~~~~~~~~~~~~~~~~~D 72 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVGDR---FK-DRITEFAAEFGSELVFPCD 72 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSGG---GH-HHHHHHHHHTTCCCEEECC
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecchh---hH-HHHHHHHHHcCCcEEEECC
Confidence 356889999999984 566777777732 36 36888887621 10 112222111111 1
Q ss_pred cCCCCCHHHHhccc-----CCcEEEEecCCC
Q 016501 194 HEPVNNLLDAVKVI-----KPTILIGSSGVG 219 (388)
Q Consensus 194 ~~~~~~L~eav~~v-----kptvlIG~S~~~ 219 (388)
-.+..++.++++.+ ++|+||=..+..
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 11123455566554 789999776553
No 425
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=63.32 E-value=8.3 Score=39.46 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=22.7
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
++++.+++|.|||.+|.++|..|.. .|. +|+++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999999888788777732 362 58888764
No 426
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=63.28 E-value=5.8 Score=39.06 Aligned_cols=20 Identities=25% Similarity=0.335 Sum_probs=17.9
Q ss_pred cEEEEeCcchHHHHHHHHHH
Q 016501 129 HRFLFLGAGEAGTGIAELIA 148 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~ 148 (388)
.+|||+|||-+|+..|..|.
T Consensus 2 k~VvVIGaG~~GL~aA~~La 21 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQ 21 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHH
Confidence 37999999999999998884
No 427
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=63.24 E-value=5.9 Score=39.08 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=27.0
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..|+|+|+|.||+..|-.+. +.| .++.++|+..
T Consensus 27 ~dVvIIGgG~aGl~aA~~la-----~~G-------~~V~llEk~~ 59 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAA-----EEG-------ANVLLLDKGN 59 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHH-----HTT-------CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHH-----HCC-------CCEEEEECCC
Confidence 57999999999999998883 236 3699999865
No 428
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=63.16 E-value=9.9 Score=34.39 Aligned_cols=86 Identities=10% Similarity=0.237 Sum_probs=54.8
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhcccC
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 208 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~vk 208 (388)
||+|.|| |--|..+++.|. .| .+++.+|++.-... -++ .+..+|.+++++.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~------~g-------~~V~~~~r~~~~~~---~D~-----------~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA------PV-------GNLIALDVHSKEFC---GDF-----------SNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT------TT-------SEEEEECTTCSSSC---CCT-----------TCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh------cC-------CeEEEecccccccc---ccC-----------CCHHHHHHHHHhcC
Confidence 7899998 888888888873 24 46888877531000 111 11235778888778
Q ss_pred CcEEEEecCCCCC----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 209 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 209 ptvlIG~S~~~g~----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+|++|=+.+.... -+..+++.+.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988765421 14567777765443 5887654
No 429
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=63.15 E-value=6.1 Score=40.28 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=27.0
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+.+|+|+|||.+|+..|..|. +.|+ ++.++|+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La-----~~G~-------~V~vlEr~ 58 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLA-----HRQV-------GHLVVEQT 58 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHH-----HTTC-------CEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHH-----HCCC-------CEEEEeCC
Confidence 3568999999999999999883 2464 57888875
No 430
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=62.86 E-value=6.6 Score=38.81 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=27.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+-.++|+|+|.||+..|..+.. .| .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQ-----LG-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----HT-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CC-------CEEEEEeCC
Confidence 4579999999999999998843 25 479999986
No 431
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=62.85 E-value=62 Score=31.22 Aligned_cols=134 Identities=16% Similarity=0.177 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHhCCCeeeeeccCCCchHHHHHHHHcCCCcccc--c--CccchHHHHHHHHHHHHHHhCCCccccEEEEe
Q 016501 59 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--D--DIQGTASVVLAGVVAALKLIGGTLAEHRFLFL 134 (388)
Q Consensus 59 vdefv~av~~~fGp~~~I~~EDf~~~~af~iL~ryr~~~~~Fn--D--DiqGTa~V~lAgll~Al~~~g~~L~d~riv~~ 134 (388)
+...++.+ .+|+ . +|-+--++. .+.+.+.+| .++||.| | ..|=| =+||=++.-.+-.| +|+..||+++
T Consensus 86 l~DTarvl-s~~~-D-~iviR~~~~-~~~~~lA~~-~~vPVINag~g~~~HPt--Q~LaDl~Ti~e~~g-~l~glkva~v 157 (306)
T 4ekn_B 86 LIDTIRVI-SGYA-D-IIVLRHPSE-GAARLASEY-SQVPIINAGDGSNQHPT--QTLLDLYTIMREIG-RIDGIKIAFV 157 (306)
T ss_dssp HHHHHHHH-HHHC-S-EEEEECSST-THHHHHHHH-CSSCEEESCSSSSCCHH--HHHHHHHHHHHHHS-CSTTCEEEEE
T ss_pred HHHHHHHH-HHhC-c-EEEEEcCCh-HHHHHHHHh-CCCCEEeCCCCCCcCcH--HHHHHHHHHHHHhC-CcCCCEEEEE
Confidence 33344433 4463 2 344555543 455566666 4799999 3 34444 46777777666666 6999999999
Q ss_pred CcchHHHHHHHHHHHHHHHhc-CCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc----CCCCCHHHHhcccCC
Q 016501 135 GAGEAGTGIAELIALEISKQT-KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKP 209 (388)
Q Consensus 135 GAGsAg~giA~ll~~~~~~~~-G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~----~~~~~L~eav~~vkp 209 (388)
|-|.=+ -+|+-++.. +.+. |+ ++.++--+|+- +++.-...+++. ....++.|++++ +
T Consensus 158 GD~~~~-rva~Sl~~~-~~~~~G~-------~v~~~~P~~~~-------~~~~~~~~~~~~g~~~~~~~d~~eav~~--a 219 (306)
T 4ekn_B 158 GDLKYG-RTVHSLVYA-LSLFENV-------EMYFVSPKELR-------LPKDIIEDLKAKNIKFYEKESLDDLDDD--I 219 (306)
T ss_dssp SCTTTC-HHHHHHHHH-HHTSSSC-------EEEEECCGGGC-------CCHHHHHHHHHTTCCEEEESCGGGCCTT--C
T ss_pred cCCCCC-cHHHHHHHH-HHhcCCC-------EEEEECCcccc-------cCHHHHHHHHHcCCEEEEEcCHHHHhcC--C
Confidence 987521 256666444 3455 75 58888777762 233322233321 123689999998 9
Q ss_pred cEEEEecCC
Q 016501 210 TILIGSSGV 218 (388)
Q Consensus 210 tvlIG~S~~ 218 (388)
||+.-..-|
T Consensus 220 Dvvy~~~~q 228 (306)
T 4ekn_B 220 DVLYVTRIQ 228 (306)
T ss_dssp SEEEECCCC
T ss_pred CEEEeCCcc
Confidence 999966443
No 432
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=62.85 E-value=3.3 Score=37.92 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=58.2
Q ss_pred ccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCC--CCccHhhhhhcc-ccCCCCCHHHH
Q 016501 128 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 203 (388)
Q Consensus 128 d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~--~~l~~~k~~~a~-~~~~~~~L~ea 203 (388)
..+|+|.|| |.-|..+++.|... | ..+++.++++. ++. ..+......+.+ +-.+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88999999888432 3 13677777641 110 001111111111 11223468888
Q ss_pred hcccCCcEEEEecCCCCC--------CCHHHHHHHhcCCCCcEEEecCC
Q 016501 204 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 244 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~--------ft~evi~~Ma~~~~rPIIFaLSN 244 (388)
+++ +|++|-+++.... .++.+++.|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 987 8999987642111 2456778887665567888 664
No 433
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=62.34 E-value=13 Score=35.81 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=45.5
Q ss_pred HHhCCCeeeeeccCCCc-------hHHHHHHHHcCCCcccccCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHH
Q 016501 68 QNYGEKVLIQFEDFANH-------NAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAG 140 (388)
Q Consensus 68 ~~fGp~~~I~~EDf~~~-------~af~iL~ryr~~~~~FnDDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg 140 (388)
+.+.+..+|| |++.. .-+++..+|.-.+++.|-|-+|+.-- . . . -
T Consensus 102 ~~~~Ga~iIN--dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t-~--------------~-~----------~ 153 (300)
T 3k13_A 102 KCLQGKSIVN--SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADT-A--------------A-R----------K 153 (300)
T ss_dssp HHCSSCCEEE--EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCS-H--------------H-H----------H
T ss_pred HhcCCCCEEE--eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCC-H--------------H-H----------H
Confidence 3333455665 66654 56778888888888888777776531 0 0 0 2
Q ss_pred HHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 141 TGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 141 ~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
+.+++.+...++.+.|++ +++|+ +|-
T Consensus 154 ~~i~~r~~~~~~~~~Gi~----~~~Ii-lDP 179 (300)
T 3k13_A 154 IEVCERAYRLLVDKVGFN----PHDII-FDP 179 (300)
T ss_dssp HHHHHHHHHHHHHHTCCC----GGGEE-EEC
T ss_pred HHHHHHHHHHHHHHcCCC----HHHEE-EeC
Confidence 357777755544678996 57887 676
No 434
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=62.17 E-value=7.1 Score=37.49 Aligned_cols=36 Identities=17% Similarity=0.344 Sum_probs=27.2
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
++.+|+|+|||.+|+..|..|.. .|. .++.++++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~-----~g~------~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ-----AGF------HDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-----CCC------CcEEEEECCC
Confidence 45789999999999999999832 351 3577777653
No 435
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=62.14 E-value=6.1 Score=41.51 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=27.1
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..|+|+|||.||+.+|..|. +.| .++.++|+..
T Consensus 265 ~DVvIIGgGiaGlsaA~~La-----~~G-------~~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQ-----RRG-------AVVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHH-----TTT-------CCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHH-----HCC-------CcEEEEeCCC
Confidence 57999999999999998883 346 3699999863
No 436
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=62.14 E-value=7.4 Score=37.49 Aligned_cols=32 Identities=19% Similarity=0.444 Sum_probs=25.8
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+|+|+|||.+|+..|..|. +.| .++.++|+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~-----~~g-------~~v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELK-----KLN-------KKVLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHG-----GGT-------CCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHH-----hCC-------CcEEEEecC
Confidence 47999999999999999883 235 468888875
No 437
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=62.14 E-value=7 Score=40.81 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=27.2
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..|+|+|||.||+.+|..|. +.| .++.++|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La-----~~G-------~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALL-----RRG-------WQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----TTT-------CEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHH-----HCC-------CeEEEEeCCC
Confidence 58999999999999998883 346 4799999853
No 438
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=62.13 E-value=7 Score=40.90 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=27.6
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|||+|+|.||+..|..+. +.| .++.++|+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~-----~~g-------~~V~lie~~~ 406 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAA-----ARG-------HQVTLFDAHS 406 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-----TTT-------CEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-----hCC-------CeEEEEeCCC
Confidence 468999999999999999883 235 3699999864
No 439
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=62.01 E-value=6.6 Score=37.85 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=26.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|||-+|+..|..|... |.. .....++.++++.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-----G~~-~~~~~~V~vlEa~ 43 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-----IKE-KNLPLELTLVEAS 43 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HTT-TTCSEEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-----ccc-cCCCCCEEEEECC
Confidence 36899999999999999999443 310 0001467778775
No 440
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=61.87 E-value=6.1 Score=39.54 Aligned_cols=37 Identities=8% Similarity=0.025 Sum_probs=27.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHH-HHHHh--cCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIAL-EISKQ--TKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~-~~~~~--~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|+|.||+..|..|.. .. .. .| .+|.++|+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~-~~~~~g-------~~V~lie~~ 42 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAAD-TTEDLD-------MAVDMLEML 42 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHH-HSTTCC-------EEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCc-cccCCC-------CeEEEEecC
Confidence 4689999999999999999943 21 00 03 469999986
No 441
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=61.67 E-value=6.8 Score=38.79 Aligned_cols=37 Identities=19% Similarity=0.347 Sum_probs=29.5
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
.+.+|+|+|||-+|+..|-.|.. .| +++.++|++.-+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~-----~G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSV-----DG-------KKVLHIDKQDHY 46 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCCCC
Confidence 34689999999999999998832 46 579999987543
No 442
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=61.49 E-value=9.5 Score=37.28 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=27.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
..+|+|+|||-+|+.+|..|.. .|- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~-----~g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER-----AFP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH-----HCT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHH-----hCC-----CCCEEEEECCC
Confidence 5689999999999999999943 251 14788888853
No 443
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=61.43 E-value=7.1 Score=39.14 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=26.4
Q ss_pred cEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..++|+|+|+||+..|..+. +.| .++.++|++
T Consensus 9 ~DvvVIGgG~aGl~aA~~la-----~~G-------~~V~liE~~ 40 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAK-----KHT-------DKVVLIEGG 40 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHH-----TTC-------SCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHH-----hCC-------CcEEEEeCC
Confidence 58999999999999998883 236 479999985
No 444
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=61.26 E-value=7.9 Score=38.45 Aligned_cols=34 Identities=32% Similarity=0.574 Sum_probs=27.4
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+.+|+|+|||.+|+..|..|.. .| .++.++|+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~-----~g-------~~v~v~E~~ 61 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLAS-----SG-------QRVLIVDRR 61 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CC-------CceEEEecc
Confidence 45789999999999999988832 35 468889885
No 445
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=61.07 E-value=44 Score=33.10 Aligned_cols=116 Identities=15% Similarity=0.150 Sum_probs=76.9
Q ss_pred CchHHHHHHHHcCCCcccc--cCccchHHHHHHHHHHHHHHhCCC-ccccE--EEEeCc----chHHHHHHHHHHHHHHH
Q 016501 83 NHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGT-LAEHR--FLFLGA----GEAGTGIAELIALEISK 153 (388)
Q Consensus 83 ~~~af~iL~ryr~~~~~Fn--DDiqGTa~V~lAgll~Al~~~g~~-L~d~r--iv~~GA----GsAg~giA~ll~~~~~~ 153 (388)
.+.+.+.+.+|- ++||.| ||.|=| =+||=++.-.+-.|++ |+..| |.++|- | --+|+-++.. +.
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~HPt--QaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~-~~ 217 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETITHPC--QELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTI-AT 217 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSCCHH--HHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHH-HH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCCCcH--HHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHH-HH
Confidence 455666677764 699999 777444 5788888888888875 99999 889998 6 3456666443 34
Q ss_pred hcCCChhhhcCcEEEEcCC-CccccCCCCCccHhhhhhcccc----CCCCCHHHHhcccCCcEEEEecC
Q 016501 154 QTKAPVEETRKKICLVDSK-GLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 217 (388)
Q Consensus 154 ~~G~s~~eA~~~i~l~D~~-Glv~~~r~~~l~~~k~~~a~~~----~~~~~L~eav~~vkptvlIG~S~ 217 (388)
+.|+ +|.++--+ |+.-. +++-+.-+.+|+.. ....++.|++++ +||+.-..=
T Consensus 218 ~~G~-------~v~~~~P~~~~~~~---~~~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 218 RMGM-------DVTLLCPTPDYILD---ERYMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp HTTC-------EEEEECSSGGGCCC---HHHHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEECC
T ss_pred HcCC-------EEEEEcCccccCCC---HHHHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECCc
Confidence 5574 68888887 77321 11222223344331 123689999998 999987653
No 446
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=61.06 E-value=29 Score=32.97 Aligned_cols=99 Identities=17% Similarity=0.116 Sum_probs=57.7
Q ss_pred cccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHh
Q 016501 127 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 204 (388)
Q Consensus 127 ~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav 204 (388)
+..||+|.|| |--|..+++.|.. .| .+++.+|++- .+...+......+.+ +-.+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 8888888888832 35 3688888752 110111111111211 112224577888
Q ss_pred cccCCcEEEEecCCCCC--C---------------CHHHHHHHhcCCCCcEEEecC
Q 016501 205 KVIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g~--f---------------t~evi~~Ma~~~~rPIIFaLS 243 (388)
++ +|++|=+.+.... + +..+++.+.+..-+.|||.=|
T Consensus 92 ~~--~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 EG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp TT--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CC--CCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 75 9999988765321 1 235666776655567887544
No 447
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=61.06 E-value=24 Score=32.98 Aligned_cols=58 Identities=19% Similarity=0.197 Sum_probs=34.7
Q ss_pred cCccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 102 DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 102 DDiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
++.++...-.++..+.+.+..+. ...++++|.|||+.|...+.++ +..|. +.++.+|+
T Consensus 136 ~~~~aa~l~~~~~~~~~~~~~~~-~~g~~VlV~GaG~vG~~aiq~a-----k~~G~------~~vi~~~~ 193 (346)
T 4a2c_A 136 PIEDGAFIEPITVGLHAFHLAQG-CENKNVIIIGAGTIGLLAIQCA-----VALGA------KSVTAIDI 193 (346)
T ss_dssp CGGGGGGHHHHHHHHHHHHHTTC-CTTSEEEEECCSHHHHHHHHHH-----HHTTC------SEEEEEES
T ss_pred CHHHHHhchHHHHHHHHHHHhcc-CCCCEEEEECCCCcchHHHHHH-----HHcCC------cEEEEEec
Confidence 34455444344444455554444 4678999999998887665444 33463 56676665
No 448
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=60.98 E-value=6.4 Score=43.67 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=27.8
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|+|.||+..|..|.. .|. +++.++|++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~-----~G~------~~Vtv~E~~ 220 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLAR-----LGY------SDITIFEKQ 220 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESS
T ss_pred CCEEEEECccHHHHHHHHHHHh-----cCC------CcEEEEeCC
Confidence 5689999999999999999832 363 269999986
No 449
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=60.76 E-value=18 Score=34.33 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=36.2
Q ss_pred chHHHHHHHHHHHHHHhCCCccc--cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 106 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 106 GTa~V~lAgll~Al~~~g~~L~d--~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
++-...++..+.++.-.++--.. ++++|.|| |..|..++.++. ..|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~-----~~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGH-----FLGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHH-----HTTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHH-----HCCC------CeEEEEeCC
Confidence 44344555556667333333356 89999998 888888877762 2463 478888873
No 450
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=60.69 E-value=6.4 Score=39.11 Aligned_cols=36 Identities=11% Similarity=0.238 Sum_probs=27.6
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
++.+||+|+|.|.+|++.|+.|. +.| .++..+|++-
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~-----~~G-------~~v~~~D~~~ 38 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFL-----ARG-------VTPRVMDTRM 38 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHH-----TTT-------CCCEEEESSS
T ss_pred CCCCEEEEEeecHHHHHHHHHHH-----hCC-------CEEEEEECCC
Confidence 56789999999999999997772 346 3567777753
No 451
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=60.66 E-value=21 Score=30.85 Aligned_cols=93 Identities=16% Similarity=0.195 Sum_probs=52.7
Q ss_pred EEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCC-CCCHHHHhcc
Q 016501 130 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 206 (388)
Q Consensus 130 riv~~G-AGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~-~~~L~eav~~ 206 (388)
||+|.| +|--|..+++.|. +.| -+++.+|++.- +...+ .+..+.+ +-.+ ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~-----~~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLS-----TTD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHT-----TSS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHH-----HCC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 789999 5777888877773 235 47888888631 11112 1111211 1122 3457778876
Q ss_pred cCCcEEEEecCCCCC--------CCHHHHHHHhcCCCCcEEEec
Q 016501 207 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILAL 242 (388)
Q Consensus 207 vkptvlIG~S~~~g~--------ft~evi~~Ma~~~~rPIIFaL 242 (388)
+|++|=+.+.... -+..+++.|.+..-+.|||.=
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~S 105 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLS 105 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEEC
Confidence 9999977765321 145566766654444555533
No 452
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=60.55 E-value=25 Score=29.92 Aligned_cols=91 Identities=11% Similarity=0.166 Sum_probs=52.4
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh--hhhhcc-ccCCCCCHHHHhc
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 205 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~--k~~~a~-~~~~~~~L~eav~ 205 (388)
||+|.|| |-.|..+++.|.. .| .+++.++++. +.+... ...+.+ +-.+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 8889999888842 35 4688887741 111111 011111 1011112 6777
Q ss_pred ccCCcEEEEecCCCCC-------CCHHHHHHHhcCCCCcEEEecC
Q 016501 206 VIKPTILIGSSGVGRT-------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 206 ~vkptvlIG~S~~~g~-------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+ +|++|=+.+.... .++.+++.|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 6 8999977765321 1367788887654455666544
No 453
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=60.49 E-value=24 Score=32.51 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=59.3
Q ss_pred ccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhh----------cc-ccC
Q 016501 128 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----------AH-EHE 195 (388)
Q Consensus 128 d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~----------a~-~~~ 195 (388)
..+|+|.|| |--|..+++.|.. .| .+++++|+.. +........+ .+ +-.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV-------NSKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS-------SSCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC-------cchHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 7788888888732 35 3688887642 1112111111 11 111
Q ss_pred CCCCHHHHhcccCCcEEEEecCCCCC----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 196 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 196 ~~~~L~eav~~vkptvlIG~S~~~g~----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+..++.++++..++|++|=+.+.... -|..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22467888886679999987765321 1346788888776678998654
No 454
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=60.48 E-value=7.5 Score=37.38 Aligned_cols=96 Identities=15% Similarity=0.103 Sum_probs=53.2
Q ss_pred ccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhc
Q 016501 126 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 205 (388)
Q Consensus 126 L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~ 205 (388)
.+..||.|+|+|..|...++.|.. ...|+ +=+.++|++ . +......+.|--......++.|+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~------~-~~~~~~a~~~g~~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV------A-GRAQAALDKYAIEAKDYNDYHDLIN 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS------T-THHHHHHHHHTCCCEEESSHHHHHH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC------H-HHHHHHHHHhCCCCeeeCCHHHHhc
Confidence 445799999999988877666521 11221 224467763 1 2233333333211123478999999
Q ss_pred ccCCcEEEEecCCCCCCCHHHHHHHhcCCCCcEEE
Q 016501 206 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 240 (388)
Q Consensus 206 ~vkptvlIG~S~~~g~ft~evi~~Ma~~~~rPIIF 240 (388)
.-++|+++ +++.. .+-.++++...+. .++|+.
T Consensus 85 ~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 85 DKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 87789988 55443 4545555544432 355554
No 455
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=60.17 E-value=5.7 Score=42.54 Aligned_cols=36 Identities=31% Similarity=0.281 Sum_probs=27.9
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..-.||.|+|+|..|.+||..+.. .|. +++++|++
T Consensus 311 ~~~i~kV~VIGaG~MG~~iA~~la~-----aG~-------~V~l~D~~ 346 (715)
T 1wdk_A 311 AKDVKQAAVLGAGIMGGGIAYQSAS-----KGT-------PILMKDIN 346 (715)
T ss_dssp CCCCSSEEEECCHHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cccCCEEEEECCChhhHHHHHHHHh-----CCC-------EEEEEECC
Confidence 3344689999999999999999843 363 58888874
No 456
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=59.80 E-value=21 Score=32.62 Aligned_cols=77 Identities=13% Similarity=0.215 Sum_probs=42.6
Q ss_pred CCCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHH
Q 016501 123 GGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 201 (388)
Q Consensus 123 g~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~ 201 (388)
..+++++++||-||++ -|.++|+.|. ++| -+++++|++.- .+......+.-+-.+..++.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~-----~~G-------~~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~ 69 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALV-----RYG-------AKVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVK 69 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHH-----HTT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHH-----HCC-------CEEEEEeCCch-------hccCceeEEEecCCCHHHHH
Confidence 4578899999999854 3555666552 246 36888886421 11111111111112223455
Q ss_pred HHhccc-----CCcEEEEecCC
Q 016501 202 DAVKVI-----KPTILIGSSGV 218 (388)
Q Consensus 202 eav~~v-----kptvlIG~S~~ 218 (388)
++++.+ +.|+||=..+.
T Consensus 70 ~~~~~~~~~~g~iD~lv~nAg~ 91 (269)
T 3vtz_A 70 EAVEKTTKKYGRIDILVNNAGI 91 (269)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCc
Confidence 666554 79999976654
No 457
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=59.70 E-value=19 Score=31.74 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=25.0
Q ss_pred CCccccEEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 124 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 124 ~~L~d~riv~~GAG-sAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..|++.+++|.||+ .-|.++|+.|. +.| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~-----~~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYA-----AHG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHH-----HTT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHH-----HCC-------CEEEEEecC
Confidence 35788999999984 34555666653 246 368888875
No 458
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=59.69 E-value=8.8 Score=39.18 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=31.1
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 175 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv 175 (388)
.+..+..|||+|+|.||+..|-.+. +.| .++.++|+...+
T Consensus 122 ~~~~~~DVvVVGaG~aGl~aA~~la-----~~G-------~~V~vlEk~~~~ 161 (571)
T 1y0p_A 122 APHDTVDVVVVGSGGAGFSAAISAT-----DSG-------AKVILIEKEPVI 161 (571)
T ss_dssp CCSEECSEEEECCSHHHHHHHHHHH-----HTT-------CCEEEECSSSSS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHH-----HCC-------CcEEEEeCCCCC
Confidence 4455678999999999999998873 246 369999987654
No 459
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=59.56 E-value=9.6 Score=38.16 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=26.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 170 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D 170 (388)
+.+|+|+|+|.||+..|..+... .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 46899999999999999998430 25 4699999
No 460
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=59.28 E-value=13 Score=33.46 Aligned_cols=88 Identities=16% Similarity=0.201 Sum_probs=54.9
Q ss_pred CccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHH
Q 016501 125 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 203 (388)
Q Consensus 125 ~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~ea 203 (388)
+-...||+|.|| |--|..+++.|. +.| .+++.+|++ . -++.+ ..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~-----~~g-------~~V~~~~r~------~-~Dl~d-----------~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLK-----GKN-------VEVIPTDVQ------D-LDITN-----------VLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHT-----TSS-------EEEEEECTT------T-CCTTC-----------HHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHH-----hCC-------CeEEeccCc------c-CCCCC-----------HHHHHHH
Confidence 346788999987 778888888773 234 368888774 1 12221 2347777
Q ss_pred hcccCCcEEEEecCCCCC----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 204 VKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 204 v~~vkptvlIG~S~~~g~----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
++.+++|++|=+.+.... -+..+++.+.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 876679999988765321 03556777765444 7888655
No 461
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=59.09 E-value=18 Score=34.30 Aligned_cols=56 Identities=21% Similarity=0.090 Sum_probs=35.2
Q ss_pred CccchHHHHHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 103 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 103 DiqGTa~V~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
+.++.....++.-+.|++..+.+ ..++|+|.|||..|...+.+. +..|. +++.+|+
T Consensus 145 ~~~aa~~~~~~ta~~al~~~~~~-~g~~VlV~GaG~vG~~a~qla-----~~~Ga-------~Vi~~~~ 200 (352)
T 1e3j_A 145 LEEGALLEPLSVGVHACRRAGVQ-LGTTVLVIGAGPIGLVSVLAA-----KAYGA-------FVVCTAR 200 (352)
T ss_dssp HHHHHTHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHH-----HHTTC-------EEEEEES
T ss_pred HHHHHhhchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHH-----HHcCC-------EEEEEcC
Confidence 34444333455556677655443 568999999988777776655 23462 3887775
No 462
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=58.94 E-value=5.8 Score=35.76 Aligned_cols=98 Identities=15% Similarity=0.096 Sum_probs=56.1
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcccc-CCCCCHHHHhccc
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKVI 207 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~-~~~~~L~eav~~v 207 (388)
||+|.|| |--|..+++.|... ..| .+++.+|++. ++...+......+.+-+ .+..+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 88888888887321 003 3688888741 11011111111121111 222468888886
Q ss_pred CCcEEEEecCCCC------CCCHHHHHHHhcCCCCcEEEecC
Q 016501 208 KPTILIGSSGVGR------TFTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 208 kptvlIG~S~~~g------~ft~evi~~Ma~~~~rPIIFaLS 243 (388)
+|++|=+.+..- .-+..+++.+.+..-+.|||.=|
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998876420 02356777777665567887544
No 463
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=58.90 E-value=27 Score=31.85 Aligned_cols=94 Identities=13% Similarity=0.242 Sum_probs=54.1
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhccc
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 207 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~v 207 (388)
||+|.|| |--|..+++.|. +.| +++.+++.. ..+.+.+.. ...+.. +-.+ .++.+++++
T Consensus 3 ~vlVTGatG~iG~~l~~~L~-----~~g--------~~v~~~~~~---~~~~~~~~~-~~~~~~~Dl~~-~~~~~~~~~- 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLS-----ESN--------EIVVIDNLS---SGNEEFVNE-AARLVKADLAA-DDIKDYLKG- 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHT-----TTS--------CEEEECCCS---SCCGGGSCT-TEEEECCCTTT-SCCHHHHTT-
T ss_pred EEEEECCCchHHHHHHHHHH-----hCC--------CEEEEEcCC---CCChhhcCC-CcEEEECcCCh-HHHHHHhcC-
Confidence 7899997 778888888872 223 344444321 111011111 111211 2233 678889985
Q ss_pred CCcEEEEecCCCCC-C---------------CHHHHHHHhcCCCCcEEEecC
Q 016501 208 KPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 208 kptvlIG~S~~~g~-f---------------t~evi~~Ma~~~~rPIIFaLS 243 (388)
+|++|-+.+.... . |..+++.|.+..-+.|||.=|
T Consensus 64 -~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 -AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp -CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred -CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988765321 1 234777887766678998655
No 464
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=58.89 E-value=19 Score=33.74 Aligned_cols=52 Identities=12% Similarity=-0.048 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhCCCccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 109 SVVLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 109 ~V~lAgll~Al~~~g~~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
...++.-+.+++-.+.--..++++|.|| |..|..++.++. ..| -+++.+|++
T Consensus 127 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~-----~~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR-----HLG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHH-----HTT-------CEEEEEESS
T ss_pred hhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHH-----HCC-------CEEEEEeCC
Confidence 3344455556653344446789999996 988988887772 236 268888764
No 465
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=58.57 E-value=7.8 Score=40.39 Aligned_cols=33 Identities=27% Similarity=0.582 Sum_probs=26.4
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHh-cCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQ-TKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~-~G~s~~eA~~~i~l~D~~ 172 (388)
+..|+|+|||.+|+..|-.| .+ .|+ ++.++|+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~L-----a~~~G~-------~V~viEr~ 65 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQL-----AAFPDI-------RTCIVEQK 65 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHH-----TTCTTS-------CEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHH-----HHhCCC-------CEEEEeCC
Confidence 56899999999999999888 23 464 57788875
No 466
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=58.52 E-value=8.6 Score=39.36 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=26.8
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.+.+|+|+|+|.||+..|..+.. .| .++.++|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~-----~g-------~~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK-----YG-------AKTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHh-----CC-------CeEEEEec
Confidence 45789999999999999988832 35 46889986
No 467
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=58.36 E-value=6.8 Score=43.91 Aligned_cols=43 Identities=19% Similarity=0.306 Sum_probs=33.3
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+|++.||+++|||.-|+-+++.|+.. |+... -..+|.++|.+=
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D~ 464 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDNDS 464 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCCB
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCCE
Confidence 46789999999999999999999543 65211 126899999873
No 468
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=58.29 E-value=8.6 Score=39.60 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=27.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..|+|+|+|.+|+++|..|.. .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4679999999999999998842 364 599999764
No 469
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=58.29 E-value=8.5 Score=39.53 Aligned_cols=34 Identities=26% Similarity=0.362 Sum_probs=27.7
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+--|+|+|+|.+|+++|..+. +.|+ ++.++++.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La-----~~G~-------~V~LlEk~ 50 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQ-----VRGI-------QTGLVEMN 50 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHH-----TTTC-------CEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHH-----hCCC-------cEEEEECC
Confidence 3567999999999999998883 2474 58899986
No 470
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=58.10 E-value=9.8 Score=38.04 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=27.6
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|+|.||+..|..|... |- ..+|.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 36899999999999999998432 41 2579999986
No 471
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=58.04 E-value=63 Score=31.86 Aligned_cols=145 Identities=15% Similarity=0.174 Sum_probs=86.2
Q ss_pred hHHHHHHHHcCCCcccc---cCccchHHHHHHHHHHHHHHhCCC------------ccccEEEEeCcchHHHHHHHHHHH
Q 016501 85 NAFELLAKYGTTHLVFN---DDIQGTASVVLAGVVAALKLIGGT------------LAEHRFLFLGAGEAGTGIAELIAL 149 (388)
Q Consensus 85 ~af~iL~ryr~~~~~Fn---DDiqGTa~V~lAgll~Al~~~g~~------------L~d~riv~~GAGsAg~giA~ll~~ 149 (388)
...+.|.+| .++||.| |..|=| =+||=++.-.+-.|.- |+..||.++|-+. .+|+-++.
T Consensus 133 ~~~~~lA~~-s~vPVINag~d~~HPt--QaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~---nva~Sl~~ 206 (353)
T 3sds_A 133 SDIANLAKH-SSVPVINALCDTFHPL--QAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDAN---NVLFDLAI 206 (353)
T ss_dssp HHHHHHHHH-CSSCEEEEECSSCCHH--HHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCC---HHHHHHHH
T ss_pred HHHHHHHhh-CCCCEEECCCCCCCcH--HHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCc---hHHHHHHH
Confidence 345556666 4789998 444444 4677777777766652 6999999999985 37887755
Q ss_pred HHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhh----hcc--cc----CCCCCHHHHhcccCCcEEEEec---
Q 016501 150 EISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH--EH----EPVNNLLDAVKVIKPTILIGSS--- 216 (388)
Q Consensus 150 ~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~----~a~--~~----~~~~~L~eav~~vkptvlIG~S--- 216 (388)
. +.+.|+ +|.++--+|+ .+++.-.. +++ .. ....++.|+|++ +||+.-..
T Consensus 207 ~-l~~lG~-------~v~~~~P~~~-------~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~--aDVvytd~w~s 269 (353)
T 3sds_A 207 A-ATKMGV-------NVAVATPRGY-------EIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKD--ADVIVTDTWIS 269 (353)
T ss_dssp H-HHHTTC-------EEEEECCTTC-------CCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTT--CSEEEECCC--
T ss_pred H-HHHcCC-------EEEEECCccc-------CCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcC--CCEEEeCCccC
Confidence 4 455675 6888877776 12332222 222 10 123689999998 99998632
Q ss_pred CC-------------CCCCCHHHHHHH-hcCCCCcEEE-ecCCCCCCCCCCHHHH
Q 016501 217 GV-------------GRTFTKEVIEAM-ASFNEKPLIL-ALSNPTSQSECTAEEA 256 (388)
Q Consensus 217 ~~-------------~g~ft~evi~~M-a~~~~rPIIF-aLSNPt~~~E~tpe~A 256 (388)
-+ +=-+|++.++.. + .+.-||+ || |-..-|++.|-.
T Consensus 270 mg~E~~~~~r~~~~~~y~vt~ell~~~~a--k~~ai~MHcL--P~~~~EI~~eV~ 320 (353)
T 3sds_A 270 MGQETEKIKRLEAFKDFKVTSELAKRGGA--KENWKFMHCL--PRHPEEVSDEVF 320 (353)
T ss_dssp ------CHHHHHHTTTCCBCHHHHHHHTC--CTTCEEEECS--CCCTTTBCHHHH
T ss_pred CchhhHHHHHHHHhhCceecHHHHhhccc--CCCcEEECCC--CCCCCeECHHHh
Confidence 11 002567666653 1 1344444 23 543357776554
No 472
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=57.96 E-value=14 Score=35.11 Aligned_cols=103 Identities=14% Similarity=0.149 Sum_probs=58.8
Q ss_pred CccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCcc-Hhhhhhcc-ccCCCCCHH
Q 016501 125 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 201 (388)
Q Consensus 125 ~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~-~~k~~~a~-~~~~~~~L~ 201 (388)
+++..+|+|.|| |--|..+++.|.. .| ..+|+.+|+..- ...+.+. ..+..+.. +-.+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g------~~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LG------VNQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TT------CSEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cC------CceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 466779999997 8888888888832 34 146888877421 1001111 01111111 111123566
Q ss_pred HHhcccCCcEEEEecCCCCC----------------CCHHHHHHHhcC-CCCcEEEecC
Q 016501 202 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 243 (388)
Q Consensus 202 eav~~vkptvlIG~S~~~g~----------------ft~evi~~Ma~~-~~rPIIFaLS 243 (388)
++++ ++|++|=+.+.... -+..+++.+.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 7777 49999988765321 145567777665 4457887544
No 473
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=57.90 E-value=9.5 Score=37.57 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=25.3
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|||.+|+..|..|. +.| .++.++++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~-----~~g-------~~v~v~E~~ 45 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLK-----IHG-------LNVTVFEAE 45 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-----TTS-------CEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHH-----HCC-------CcEEEEEeC
Confidence 468999999999999999883 235 356666665
No 474
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=57.80 E-value=13 Score=33.30 Aligned_cols=36 Identities=19% Similarity=0.300 Sum_probs=24.0
Q ss_pred CccccEEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAG-sAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+|++.+++|.||+ --|.++|+.|. ++| -+++++|++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~-----~~G-------~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLL-----GEG-------AKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-----HTT-------CEEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-----HCC-------CEEEEEeCC
Confidence 5778899999974 34555666662 236 368888764
No 475
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=57.72 E-value=8.3 Score=36.72 Aligned_cols=36 Identities=31% Similarity=0.439 Sum_probs=29.6
Q ss_pred CccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+|++.+|||+|+|..|..-+++|.. .| .+|.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~-----~G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMP-----TG-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGG-----GT-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHh-----CC-------CEEEEEcCC
Confidence 5789999999999999999999943 35 468888864
No 476
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=57.62 E-value=12 Score=32.85 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=40.0
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc-
Q 016501 130 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 207 (388)
Q Consensus 130 riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v- 207 (388)
+|+|.|| |--|..+++.|.. .| .+++++|++. +.+.. .+.-+-.+..++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ-------ADIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS-------SSEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh-------hHccc---cccCCcccHHHHHHHHHHcC
Confidence 6889987 6677778777732 35 3688888742 11211 1111111113466666644
Q ss_pred -CCcEEEEecCCC
Q 016501 208 -KPTILIGSSGVG 219 (388)
Q Consensus 208 -kptvlIG~S~~~ 219 (388)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999877654
No 477
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=57.50 E-value=11 Score=37.04 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=26.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
..+|+|+|||.+|+..|..|.. .| .++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~-----~g-------~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAG-----AG-------HQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHH-----HT-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 5689999999999999999843 25 357777765
No 478
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=57.44 E-value=18 Score=33.91 Aligned_cols=49 Identities=20% Similarity=0.174 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 111 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 111 ~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.....+.+++..+.+ ..++++|+|||+.|...+.++ . ..| -.+|+.+|+
T Consensus 148 ~~~ta~~~l~~~~~~-~g~~VlV~GaG~~g~~a~~~a-~----~~~------g~~Vi~~~~ 196 (348)
T 4eez_A 148 AGVTTYKAIKVSGVK-PGDWQVIFGAGGLGNLAIQYA-K----NVF------GAKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHH-H----HTS------CCEEEEEES
T ss_pred ceeeEEeeecccCCC-CCCEEEEEcCCCccHHHHHHH-H----HhC------CCEEEEEEC
Confidence 334456777776654 578999999999887665555 2 223 257888776
No 479
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=56.95 E-value=2.4 Score=39.27 Aligned_cols=19 Identities=21% Similarity=0.258 Sum_probs=16.6
Q ss_pred cEEEEeCcchHHHHHHHHH
Q 016501 129 HRFLFLGAGEAGTGIAELI 147 (388)
Q Consensus 129 ~riv~~GAGsAg~giA~ll 147 (388)
.||.|+|+|..|.++|+.|
T Consensus 3 m~I~iIG~G~mG~~la~~l 21 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECL 21 (276)
T ss_dssp -CCEEESCCHHHHHHHHTT
T ss_pred ceEEEEeCCHHHHHHHHHH
Confidence 3799999999999998877
No 480
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=56.91 E-value=14 Score=32.73 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=18.3
Q ss_pred CCcEEEEecCCCCCCCHHHHHHHh
Q 016501 208 KPTILIGSSGVGRTFTKEVIEAMA 231 (388)
Q Consensus 208 kptvlIG~S~~~g~ft~evi~~Ma 231 (388)
+-|++|++|..| =|+++++.+.
T Consensus 114 ~~Dvvi~iS~SG--~t~~~~~~~~ 135 (201)
T 3trj_A 114 EDDILLVITTSG--DSENILSAVE 135 (201)
T ss_dssp TTCEEEEECSSS--CCHHHHHHHH
T ss_pred CCCEEEEEeCCC--CCHHHHHHHH
Confidence 379999999876 6899998775
No 481
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=56.73 E-value=30 Score=32.96 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=25.2
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.++|+|.|||..|..++.++ .. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a-~~----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLF-RT----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHH-HH----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHH-Hh----CC-----C--EEEEEeCC
Confidence 89999999988888887766 22 36 2 78888864
No 482
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=56.64 E-value=8.7 Score=33.51 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=55.8
Q ss_pred cccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHh
Q 016501 127 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 204 (388)
Q Consensus 127 ~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav 204 (388)
...+|+|.|| |--|..+++.|.. .|- ..+++.++++. ++.+.+. ....+.+ +-.+..++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHHH
Confidence 4578999995 7788888888832 210 14688887742 0000010 0011111 112224678888
Q ss_pred cccCCcEEEEecCCCCC----------------C-------------CHHHHHHHhcCCCCcEEEecC
Q 016501 205 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 205 ~~vkptvlIG~S~~~g~----------------f-------------t~evi~~Ma~~~~rPIIFaLS 243 (388)
+. +|++|=+.+.... | +..+++.|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 76 8999977654310 1 356777777655556777543
No 483
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=56.49 E-value=26 Score=31.26 Aligned_cols=77 Identities=14% Similarity=0.225 Sum_probs=42.1
Q ss_pred CCCccccEEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHH
Q 016501 123 GGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 201 (388)
Q Consensus 123 g~~L~d~riv~~GAG-sAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~ 201 (388)
..+|++.+++|.||+ --|..+|+.|. ++| -+++++|++- ++.+.+. .+.-+-.+..++.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~-----~~G-------~~V~~~~r~~----~~~~~~~----~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLA-----ADG-------HKVAVTHRGS----GAPKGLF----GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHH-----HTT-------CEEEEEESSS----CCCTTSE----EEECCTTCHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHH-----HCC-------CEEEEEeCCh----HHHHHhc----CeeccCCCHHHHH
Confidence 345788899999974 34555555552 245 3688888742 1111221 1111112223455
Q ss_pred HHhccc-----CCcEEEEecCCC
Q 016501 202 DAVKVI-----KPTILIGSSGVG 219 (388)
Q Consensus 202 eav~~v-----kptvlIG~S~~~ 219 (388)
++++.+ +.|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555543 689999777653
No 484
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=56.31 E-value=36 Score=30.39 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=23.6
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
|++.+++|.|| |--|.++|+.|. ++| -+++++|++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~-----~~G-------~~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLA-----RAG-------ANIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHH-----HTT-------CEEEEECSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCC-------CEEEEEeCC
Confidence 66788999998 445666666663 246 368887764
No 485
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=56.22 E-value=8.8 Score=41.17 Aligned_cols=36 Identities=28% Similarity=0.458 Sum_probs=29.0
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 174 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Gl 174 (388)
+.+|+|+|||.+|+.+|..|.. .|. .++.++|++.+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~-----~G~------~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVT-----RGW------NNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC------CcEEEEeCCCC
Confidence 4689999999999999998832 363 37999998754
No 486
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=55.91 E-value=6.3 Score=35.38 Aligned_cols=77 Identities=25% Similarity=0.365 Sum_probs=45.2
Q ss_pred CCccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-------ccC
Q 016501 124 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-------EHE 195 (388)
Q Consensus 124 ~~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-------~~~ 195 (388)
.+|++.+++|.||++ -|..+|+.|. ++| .+++++|++- +.+...+..+.. +-.
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~-----~~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFA-----KGG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH-----HTT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHH-----HCC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999864 3666777763 236 3688888741 223332222211 111
Q ss_pred CCCCHHHHhccc-----CCcEEEEecCCC
Q 016501 196 PVNNLLDAVKVI-----KPTILIGSSGVG 219 (388)
Q Consensus 196 ~~~~L~eav~~v-----kptvlIG~S~~~ 219 (388)
+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223566666655 799999776653
No 487
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=55.79 E-value=9.4 Score=40.18 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=27.9
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 173 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~G 173 (388)
+..|+|+|||.+|+..|-.|....-+..|+ ++.++|+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-------~v~viE~~~ 46 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL-------KVRIIDKRS 46 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC-------CEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC-------CEEEEeCCC
Confidence 467999999999999999884310001475 588888753
No 488
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=55.70 E-value=7 Score=36.41 Aligned_cols=101 Identities=13% Similarity=0.177 Sum_probs=60.6
Q ss_pred ccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhh----------hhcc-c
Q 016501 126 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 193 (388)
Q Consensus 126 L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~----------~~a~-~ 193 (388)
++..||+|.|| |--|..+++.|.. .| .+++.+|+..- .....+...+. .+.+ +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 46789999996 8889999888843 35 46888887421 11011111111 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEEecCCCCC----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 194 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 194 ~~~~~~L~eav~~vkptvlIG~S~~~g~----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
-.+..++.+++++ +|++|=+.+.... -|..+++.+.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTTT--CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhcC--CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 1122457888885 9999988765321 1344788888776678998643
No 489
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=55.50 E-value=21 Score=34.26 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=26.4
Q ss_pred CCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 124 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 124 ~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.--..++|+|+|||+.|...+.+. .. .|. ++|+.+|+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a-~~----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGA-KT----AGA------SRIIGIDI 226 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHH-HH----HTC------SCEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHH-HH----cCC------CeEEEEcC
Confidence 333678999999998887776655 32 363 57888875
No 490
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=55.28 E-value=9.6 Score=39.35 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=25.6
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+..|+|+|||.+|+..|-.|. +.|+ ++.++|+.
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La-----~~G~-------~V~VlEr~ 81 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELR-----AGGV-------GALVLEKL 81 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHH-----HTTC-------CEEEEBSC
T ss_pred CCCEEEECcCHHHHHHHHHHH-----HCCC-------CEEEEcCC
Confidence 457999999999999999883 2474 58888875
No 491
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=55.27 E-value=11 Score=33.92 Aligned_cols=84 Identities=20% Similarity=0.314 Sum_probs=54.8
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccccCCCCCHHHHhccc
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 207 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~~~~~~~L~eav~~v 207 (388)
.||+|.|| |--|..+++.|. +.| .+++.+|+. . -++. +..++.++++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~-----~~g-------~~V~~~~r~------~-~D~~-----------d~~~~~~~~~~~ 55 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELN-----PEE-------YDIYPFDKK------L-LDIT-----------NISQVQQVVQEI 55 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSC-----TTT-------EEEEEECTT------T-SCTT-----------CHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHH-----hCC-------CEEEEeccc------c-cCCC-----------CHHHHHHHHHhc
Confidence 38999996 888888888873 224 468888871 1 1222 123577788877
Q ss_pred CCcEEEEecCCCCC----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 208 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 208 kptvlIG~S~~~g~----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
++|++|=+.+.... -+..+++.+.+..- .+||.=|
T Consensus 56 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 56 RPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 89999987765421 03457777776554 4887654
No 492
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=55.22 E-value=6.9 Score=40.60 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=26.7
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+.+|+|+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~-----~G~-------kV~VlEr~ 139 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQ-----MGF-------NPIIVERG 139 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHH-----TTC-------CCEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEEcc
Confidence 4689999999999999988832 464 57888876
No 493
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=55.16 E-value=25 Score=31.46 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=40.4
Q ss_pred CccccEEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhh------hcc-ccCC
Q 016501 125 TLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAH-EHEP 196 (388)
Q Consensus 125 ~L~d~riv~~GAGs-Ag~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~------~a~-~~~~ 196 (388)
+|++.+++|-||++ -|.++|+.|. ++| -+++++|++- +.+...... +.+ +-.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~-----~~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~ 64 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLA-----QEG-------ATVLGLDLKP-------PAGEEPAAELGAAVRFRNADVTN 64 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHH-----HTT-------CEEEEEESSC-------C------------CEEEECCTTC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHH-----HCC-------CEEEEEeCCh-------HHHHHHHHHhCCceEEEEccCCC
Confidence 57788999999853 4555666663 246 3688888742 111111111 111 1112
Q ss_pred CCCHHHHhccc-----CCcEEEEecCC
Q 016501 197 VNNLLDAVKVI-----KPTILIGSSGV 218 (388)
Q Consensus 197 ~~~L~eav~~v-----kptvlIG~S~~ 218 (388)
..++.++++.+ +.|+||=..+.
T Consensus 65 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 65 EADATAALAFAKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 23466666644 79999976654
No 494
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=54.99 E-value=11 Score=35.85 Aligned_cols=102 Identities=13% Similarity=0.146 Sum_probs=58.8
Q ss_pred ccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHh--hhhhccccCCCCCHHHHhc
Q 016501 128 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAHEHEPVNNLLDAVK 205 (388)
Q Consensus 128 d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~--k~~~a~~~~~~~~L~eav~ 205 (388)
..||.|+|+|+-|..+|..|.. .| .+++++|+.--+..-+...++.. ...+-..-....++.+ ++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~-----~g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLAL-----AG-------EAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LG 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHH-----TT-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HC
T ss_pred CCEEEEECcCHHHHHHHHHHHH-----CC-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cC
Confidence 4689999999999999999833 35 36888887311100000011100 0000000011245665 45
Q ss_pred ccCCcEEEEecCCCCCCCHHHHHHHhcCC-CCcEEEecCCCC
Q 016501 206 VIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 246 (388)
Q Consensus 206 ~vkptvlIG~S~~~g~ft~evi~~Ma~~~-~rPIIFaLSNPt 246 (388)
. +|++| ++... -..+++++.++... +..+|..++|..
T Consensus 70 ~--~D~Vi-lavk~-~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 E--QDVVI-VAVKA-PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp C--CSEEE-ECCCH-HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred C--CCEEE-EeCCc-hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 4 88887 44433 35778888887543 567899999984
No 495
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=54.80 E-value=11 Score=38.08 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=27.3
Q ss_pred cccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 127 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 127 ~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
.+..++|+|+|.||+..|..+.. .| .++.++|++
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~-----~G-------~~V~liEk~ 64 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQ-----YG-------KKVMVLDFV 64 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEecc
Confidence 35689999999999999988832 36 369999974
No 496
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=54.78 E-value=21 Score=32.66 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=56.9
Q ss_pred cEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhcc-ccCCCCCHHHHhcc
Q 016501 129 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 206 (388)
Q Consensus 129 ~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~-~~~~~~~L~eav~~ 206 (388)
.||+|.|| |--|..+++.|.. .| .+++.+|+.- ....+.+.. ...+.+ +-.+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 8888888888832 35 3688887641 111011211 111211 11222457778875
Q ss_pred cCCcEEEEecCCCCC----------------CCHHHHHHHhcCCCCcEEEecC
Q 016501 207 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 243 (388)
Q Consensus 207 vkptvlIG~S~~~g~----------------ft~evi~~Ma~~~~rPIIFaLS 243 (388)
.++|++|=+.+.... -+..+++.+.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 569999987765321 1345677776655567888544
No 497
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=54.64 E-value=27 Score=33.67 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhCCCccccEEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 016501 111 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 171 (388)
Q Consensus 111 ~lAgll~Al~~~g~~L~d~riv~~GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~ 171 (388)
.++.-+.+++..+ --..++|+|+|+|..|...+.+. +..|. ++|+.+|+
T Consensus 170 ~~~ta~~al~~~~-~~~g~~VlV~GaG~vG~~aiqlA-----k~~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 170 ILPTGYHGAVTAG-VGPGSTVYVAGAGPVGLAAAASA-----RLLGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHHHTT-CCTTCEEEEECCSHHHHHHHHHH-----HHTTC------SEEEEEES
T ss_pred HHHHHHHHHHHcC-CCCCCEEEEECCcHHHHHHHHHH-----HHCCC------CeEEEEcC
Confidence 3445566776433 33678999999998887776555 23463 57888776
No 498
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=54.48 E-value=44 Score=31.49 Aligned_cols=92 Identities=16% Similarity=0.223 Sum_probs=49.1
Q ss_pred HHHHHhCCCccccEEEEe-CcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccccCCCCCccHhhhhhccc--
Q 016501 117 AALKLIGGTLAEHRFLFL-GAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 193 (388)
Q Consensus 117 ~Al~~~g~~L~d~riv~~-GAGsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~Glv~~~r~~~l~~~k~~~a~~-- 193 (388)
.+++..+ .-.++++||. |+|..|..++.++ .. .| | +++.+|+. .+ .+...++.=|..
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla-~~----~G-----a--~Vi~~~~~----~~---~~~~~~~~Ga~~~~ 214 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLA-KE----EG-----F--RPIVTVRR----DE---QIALLKDIGAAHVL 214 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHH-HH----HT-----C--EEEEEESC----GG---GHHHHHHHTCSEEE
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHH-HH----CC-----C--EEEEEeCC----HH---HHHHHHHcCCCEEE
Confidence 5666555 4455788876 7888888877666 32 36 2 68887752 11 122222111111
Q ss_pred cCCCCCHHHHhcc----cCCcEEEEecCCCCCCCHHHHHHH
Q 016501 194 HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAM 230 (388)
Q Consensus 194 ~~~~~~L~eav~~----vkptvlIG~S~~~g~ft~evi~~M 230 (388)
.....++.+.++. -+.|++|=+++.. ..++.++.|
T Consensus 215 ~~~~~~~~~~v~~~~~~~g~D~vid~~g~~--~~~~~~~~l 253 (349)
T 3pi7_A 215 NEKAPDFEATLREVMKAEQPRIFLDAVTGP--LASAIFNAM 253 (349)
T ss_dssp ETTSTTHHHHHHHHHHHHCCCEEEESSCHH--HHHHHHHHS
T ss_pred ECCcHHHHHHHHHHhcCCCCcEEEECCCCh--hHHHHHhhh
Confidence 1112456555543 3699999877532 224444444
No 499
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=54.27 E-value=11 Score=35.79 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=24.8
Q ss_pred cEEEEeCcchHHHH-HHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 129 HRFLFLGAGEAGTG-IAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 129 ~riv~~GAGsAg~g-iA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+||.|+|.|.+|++ +|++|.. .| .++...|++
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~-----~G-------~~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKE-----AG-------FEVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHh-----CC-------CEEEEEcCC
Confidence 58999999999995 8888832 46 357777764
No 500
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=54.15 E-value=7.5 Score=35.09 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=24.5
Q ss_pred CccccEEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 016501 125 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 172 (388)
Q Consensus 125 ~L~d~riv~~GA-GsAg~giA~ll~~~~~~~~G~s~~eA~~~i~l~D~~ 172 (388)
+|++.+++|.|| |.-|..+|+.|. ++| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~-----~~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAV-----AAG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHH-----HTT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-----HCC-------CEEEEEeCC
Confidence 467889999997 445666666663 246 368888774
Done!