BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016503
(388 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UTS8|YI7B_SCHPO UPF0695 membrane protein C977.11/PB8B6.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC977.11 PE=3 SV=1
Length = 311
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 129 KVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVD---------GHWVLAFLG-FFIGLFL 178
K + ++ + TG+ GSLTTFS W +M + G+ L+ + F + + +
Sbjct: 61 KHNATFLLAITTGFCGSLTTFSSWMLQMFTGMANLDPFERRGRGYSFLSVVSDFMVTMCI 120
Query: 179 ASHSIIFGIETAKGFRWLLKRYSTSSGKETPKSGSNWKVDSCKRHLAVILALTLLLCALW 238
A S+I+G + K T+ K W + + H+ V + L LL +
Sbjct: 121 AMSSLIWGKQIGK----------TTGQWRIGKVAFAWPIPA-HTHIVVRVLLLLLSICFF 169
Query: 239 IVSAVLSKEEFDGGGRAAELWLGCIVGPIGVWIRWFLAR-LNGRGLGKAGTLRWVPFGTL 297
+ +A + + R L I P R +LAR LN ++P+GTL
Sbjct: 170 VGAAFYTAYTTNVTHRGIGFSL--IFSPFAALTRLYLARFLNSPQY-------FIPYGTL 220
Query: 298 IANVSAACVMAALATVKKAVD-TKTCNTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSP 356
ANV A +++ + + + T +V GIQ G LST+STF E + M
Sbjct: 221 CANVFATLLLSIMYMIPQITHCTPVSRSVMYGIQNGFCAVLSTLSTFSNELHTMPIK--- 277
Query: 357 WRAYAYALITILISFGLGILIYSVPVWTKGYN 388
RAY Y +I++ ISF + +++ W GY
Sbjct: 278 -RAYIYCIISVAISFSICVIVDGATAWGHGYT 308
>sp|A5GAD3|CRCB_GEOUR Protein CrcB homolog OS=Geobacter uraniireducens (strain Rf4)
GN=crcB PE=3 SV=1
Length = 124
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 25/134 (18%)
Query: 67 LVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVV 122
++++AVFG LG LSRY L +LFG + Y N+VG+F +G +
Sbjct: 4 VLYIAVFGALGCLSRYYLSGWVYELFGRAFP---------YGTFAVNIVGAFCIGLI-ME 53
Query: 123 FKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFLGFFIGLFLASHS 182
F + VS L IGL G+LG LTTFS ++ + L DG L +AS +
Sbjct: 54 FSLRSALVSPQLRIGLTIGFLGGLTTFSTFSYETFRLLEDGE-----------LLIASAN 102
Query: 183 IIFGIETAKGFRWL 196
++F + T F WL
Sbjct: 103 VLFSVMTCLVFTWL 116
>sp|Q08913|YO390_YEAST UPF0695 membrane protein YOR390W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YOR390W PE=3 SV=1
Length = 375
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 149/373 (39%), Gaps = 65/373 (17%)
Query: 62 EYISCLVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGV 121
YI F ILG +R + L + A VT+ ++L+ SN LMG
Sbjct: 14 HYIHVFCTFTTFCILGTETRQAITALSTYTPAFVTAP-TVLW----SNCSSCMLMGIMQS 68
Query: 122 VFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVD---------------GHWV 166
+ K L +G+ TGY G+L++FS +M + + + + +
Sbjct: 69 LNAYTWMKDHQVLFLGVTTGYCGALSSFSSMLLEMFEHSTNLTNGNIANHTKLPNRAYGI 128
Query: 167 LAFLG-FFIGLFLASHSIIFGIETAK------GFRWLLKRYSTSSG-----------KET 208
+ FL + L ++ S+IFG + K G K Y+ S +E
Sbjct: 129 MEFLSVLLVHLMVSMGSLIFGRQLGKEVIVAYGSSSFSKPYTPPSDTVKENAGDVDTQEM 188
Query: 209 PKSGSNWKVDS----CKRHLAVILALTLLLCALWIVSAVLSKEEFDGGGRAAELW-LGCI 263
K+ +K + K+ ++ L L I+ V+ ++ R W L C+
Sbjct: 189 EKNILEFKFKTPAPFFKKFFDIVDKLAYALAFPLIILFVVLCAYYENYSRGK--WTLPCL 246
Query: 264 VGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKK-----AVD 318
G ++R++LA + + T + P GT +ANV A ++ V++ + D
Sbjct: 247 FGIFAGFLRYWLAEMFNK------TNKKFPLGTFLANVFATLLIGIFTMVQRGKKHFSTD 300
Query: 319 TKTCNT-----VASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGL 373
N+ + S + G G LST+STF+ E + S Y ++I IS+ L
Sbjct: 301 VPIVNSLNSCHIVSALISGFCGTLSTISTFINEGYKL----SFINMLIYYTVSIAISYCL 356
Query: 374 GILIYSVPVWTKG 386
++ WT+G
Sbjct: 357 LVITLGSYAWTRG 369
>sp|Q08991|YP279_YEAST UPF0695 membrane protein YPL279C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPL279C PE=3 SV=1
Length = 375
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 149/373 (39%), Gaps = 65/373 (17%)
Query: 62 EYISCLVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGV 121
YI F ILG +R + L + A VT+ ++L+ SN LMG
Sbjct: 14 HYIHVFCTFTTFCILGTETRQAITALSTYTPAFVTAP-TVLW----SNCSSCMLMGIMQS 68
Query: 122 VFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVD---------------GHWV 166
+ K L +G+ TGY G+L++FS +M + + + + +
Sbjct: 69 LNAYTWMKDHQVLFLGVTTGYCGALSSFSSMLLEMFEHSTNLTNGNIANHTKLPNRAYGI 128
Query: 167 LAFLG-FFIGLFLASHSIIFGIETAK------GFRWLLKRYSTSSG-----------KET 208
+ FL + L ++ S+IFG + K G K Y+ S +E
Sbjct: 129 MEFLSVLLVHLMVSMGSLIFGRQLGKEVIVAYGSSSFSKPYTPPSDTVKENAGDVDTQEM 188
Query: 209 PKSGSNWKVDS----CKRHLAVILALTLLLCALWIVSAVLSKEEFDGGGRAAELW-LGCI 263
K+ +K + K+ V+ L L I+ V+ ++ R W L C+
Sbjct: 189 EKNILEFKFKTPAPFFKKFFDVVDKLAYALAFPLIILFVVLCAYYENYSRGK--WTLPCL 246
Query: 264 VGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKK-----AVD 318
G ++R++LA + + T + P GT +ANV A ++ V++ + D
Sbjct: 247 FGIFAGFLRYWLAEMFNK------TNKKFPLGTFLANVFATLLIGIFTMVQRGKKHFSTD 300
Query: 319 TKTCNT-----VASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGL 373
N+ + S + G G LST+STF+ E + S Y ++I IS+ L
Sbjct: 301 IPIVNSLNSCHIVSALISGFCGTLSTISTFINEGYKL----SFINMLIYYTVSIGISYCL 356
Query: 374 GILIYSVPVWTKG 386
++ WT+G
Sbjct: 357 LVITLGSYAWTRG 369
>sp|Q5HXN6|CRCB_GLUOX Protein CrcB homolog OS=Gluconobacter oxydans (strain 621H) GN=crcB
PE=3 SV=1
Length = 144
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 61 LEYISCLVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWG 120
+ + +CL+ + V G LG L+RYL+ P ++ G+IL P N +GSF++G++G
Sbjct: 1 MSFTTCLIVM-VGGALGTLARYLVSVAAMP-ISRFIPWGTIL----PINALGSFVIGFFG 54
Query: 121 VVFKGDIS-KVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFLGFFIGLFLA 179
+ D VS+ + + + G G TTFS ++ + LDL + W A + + L
Sbjct: 55 TLTLADGRYPVSENMRLFVMIGLCGGYTTFSSFSLQTLDLIRNDAWGRASVNVAASVILC 114
Query: 180 SHSIIFGIETAKGFRWLLKRYSTSSGKE 207
++ G TA GF R + ++ +E
Sbjct: 115 IGAVALGHITADGFNTGAIRIAQTATEE 142
>sp|Q39R93|CRCB_GEOMG Protein CrcB homolog OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=crcB PE=3 SV=1
Length = 124
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGD 126
+V +A+FG LG L+RYLL V G+ L N+VG+FL+G + F
Sbjct: 4 IVAIALFGALGCLARYLLAGWVYAFVGRGFPYGT-----LTVNVVGAFLIGLI-MEFSLR 57
Query: 127 ISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
+ + L IGL G+LG LTTFS ++ + L DG ++ A
Sbjct: 58 TTLIPQELRIGLTIGFLGGLTTFSTFSYETFRLLEDGEFITA 99
>sp|A6Q4S3|CRCB_NITSB Protein CrcB homolog OS=Nitratiruptor sp. (strain SB155-2) GN=crcB
PE=3 SV=1
Length = 128
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 65 SCLVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFK 124
S + + + G G +SR+L+ + G+ L N++GSF++G+ + F+
Sbjct: 4 SVIFAVGIGGFFGAISRFLIATWMQKITHSLFPVGT-----LTVNVLGSFIIGFLYMYFE 58
Query: 125 GDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFLGFFIGLFLASHS 182
I+ + + I TG+LG+LTTFS ++ + L + DG W+ AFL + + L S
Sbjct: 59 QSINPIYKAMFI---TGFLGALTTFSTFSLETLLMIQDGLWIRAFLNILLNVILTISS 113
>sp|C6E0U8|CRCB_GEOSM Protein CrcB homolog OS=Geobacter sp. (strain M21) GN=crcB PE=3
SV=1
Length = 124
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 67 LVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVV 122
LV++A+ G LG L RY L ++FG S Y L N++G+FL+G +
Sbjct: 4 LVYIALLGALGCLCRYFLSGLVYQVFGTSFP---------YGTLAVNLIGAFLIGLV-ME 53
Query: 123 FKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFL 170
F + + L + G+LG LTTFS ++ + L DG ++AF+
Sbjct: 54 FSVRSAAIPPTLRFAITIGFLGGLTTFSTFSFETFRLLEDGALLIAFV 101
>sp|Q8Y5I0|CRCB2_LISMO Protein CrcB homolog 2 OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=crcB2 PE=3 SV=1
Length = 129
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPS-----NMVGSFLMGWWGV 121
+++ VFG LG + RY + G D PS N++G FL+ + +
Sbjct: 3 FLYVGVFGALGGMCRYAMNLWLGGG-------------DFPSATLAVNLIGCFLLAFL-M 48
Query: 122 VFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
F + S+VS L+ G+ TG++G+ TTFS ++ + L G W+ A
Sbjct: 49 RFLAEKSRVSLVLLNGIGTGFIGAFTTFSAFSVDTIQLVQSGAWLFA 95
>sp|Q3J5P3|CRCB_RHOS4 Protein CrcB homolog OS=Rhodobacter sphaeroides (strain ATCC 17023
/ 2.4.1 / NCIB 8253 / DSM 158) GN=crcB PE=3 SV=1
Length = 124
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 21/135 (15%)
Query: 64 ISCLVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWW 119
IS L+ +A+ G LG +RYL +LFGP+ G+++ N+VGSFLMG
Sbjct: 2 ISSLLQVALGGALGASARYLTNVGSMRLFGPAF----PVGTMIV-----NVVGSFLMGVL 52
Query: 120 GVVFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVL--AFLGFFIGLF 177
VV ++ + +L+ TG LG TTFS ++ + L G L A++G +GL
Sbjct: 53 VVVLAHKGNRYAPFLM----TGMLGGFTTFSAFSLDAVTLYERGQAGLAAAYVGLSVGLS 108
Query: 178 LASHSIIFGIETAKG 192
LA ++ G+ +G
Sbjct: 109 LA--GLMAGMAAVRG 121
>sp|A3PGP0|CRCB_RHOS1 Protein CrcB homolog OS=Rhodobacter sphaeroides (strain ATCC 17029
/ ATH 2.4.9) GN=crcB PE=3 SV=1
Length = 124
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 21/135 (15%)
Query: 64 ISCLVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWW 119
IS L+ +A+ G LG +RYL +LFGP+ G+++ N+VGSFLMG
Sbjct: 2 ISSLLQVALGGALGASARYLTNVGSMRLFGPAF----PVGTMIV-----NVVGSFLMGVL 52
Query: 120 GVVFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVL--AFLGFFIGLF 177
VV ++ + +L+ TG LG TTFS ++ + L G L A++G +GL
Sbjct: 53 VVVLAHKGNRYAPFLM----TGMLGGFTTFSAFSLDAVTLYERGQAGLAAAYVGLSVGLS 108
Query: 178 LASHSIIFGIETAKG 192
LA ++ G+ +G
Sbjct: 109 LA--GLMAGMAAVRG 121
>sp|Q4L7C3|CRCB2_STAHJ Protein CrcB homolog 2 OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=crcB2 PE=3 SV=1
Length = 121
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G G +R+ L+ LN +P GTLIAN+ A +M L+++ K
Sbjct: 8 IGGLFGALLRYVLSTLNVD--------SGLPLGTLIANIVGAFLMGYLSSLSIHF-FKNN 58
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYAL 364
+ G+ GLLG L+T STF E M ++ S + Y L
Sbjct: 59 PLIKKGVTTGLLGALTTFSTFQFELVTMSQNNSIALLFIYGL 100
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 69 HLAVF--GILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGD 126
+L VF G+ G L RY+L L D + L +N+VG+FLMG+ +
Sbjct: 3 YLFVFIGGLFGALLRYVLSTL--------NVDSGLPLGTLIANIVGAFLMGYLSSL-SIH 53
Query: 127 ISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFL 170
K + + G+ TG LG+LTTFS + +++ ++ + L F+
Sbjct: 54 FFKNNPLIKKGVTTGLLGALTTFSTFQFELVTMSQNNSIALLFI 97
>sp|Q71XT1|CRCB2_LISMF Protein CrcB homolog 2 OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=crcB2 PE=3 SV=1
Length = 129
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 19/107 (17%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPS-----NMVGSFLMGWWGV 121
+++ VFG LG + RY + G D PS N++G FL+ + +
Sbjct: 3 FLYVGVFGALGGMCRYAMNLWLGGG-------------DFPSATLAVNLIGCFLLAFL-M 48
Query: 122 VFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
F + S++S ++ G+ TG++G+ TTFS ++ + L G W+ A
Sbjct: 49 QFLAEKSRISLVILNGIGTGFIGAFTTFSAFSVDTIQLVQSGAWLFA 95
>sp|B5EDZ1|CRCB_GEOBB Protein CrcB homolog OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=crcB PE=3 SV=1
Length = 124
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 67 LVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVV 122
LV++A+ G LG L RY L ++FG S Y L N++G+FL+G +
Sbjct: 4 LVYIALLGALGCLCRYFLSGFVYQVFGTSFP---------YGTLAVNLIGAFLIGLI-ME 53
Query: 123 FKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
F + + L + G+LG LTTFS ++ + L DG ++A
Sbjct: 54 FSVRSAAIPPTLRFAITIGFLGGLTTFSTFSFETFRLLEDGALLIA 99
>sp|A3QEI9|CRCB_SHELP Protein CrcB homolog OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=crcB PE=3 SV=1
Length = 124
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFK-G 125
L+ +A+ G +G + RYL+ +F V G S + L N++GSFLMG V++ G
Sbjct: 4 LIFVALGGSIGAVFRYLIS-IFMIQVFG----SSFPFGTLMVNVIGSFLMG---VIYALG 55
Query: 126 DISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAF 169
+ S+VS + + G LG+LTTFS ++ + L L G W+ AF
Sbjct: 56 EASQVSPEIKALVGVGLLGALTTFSTFSNETLLLMQQGAWLKAF 99
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTCNT 324
G IG R+ ++ + G + PFGTL+ NV + +M + + +A ++
Sbjct: 11 GSIGAVFRYLISIFMIQVFGSS-----FPFGTLMVNVIGSFLMGVIYALGEA--SQVSPE 63
Query: 325 VASGIQFGLLGCLSTVSTFMAE 346
+ + + GLLG L+T STF E
Sbjct: 64 IKALVGVGLLGALTTFSTFSNE 85
>sp|B1KG50|CRCB_SHEWM Protein CrcB homolog OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=crcB PE=3 SV=1
Length = 124
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 17/109 (15%)
Query: 67 LVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVV 122
++ +A+ G +G + RYL+ +LFG + + L N++GSFLMG V+
Sbjct: 4 ILFVALGGSIGAVFRYLISIFMVQLFGSAFP---------FGTLLVNIIGSFLMG---VI 51
Query: 123 FK-GDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFL 170
+ G +S+VS + + G LG+LTTFS ++ + L L G W+ AFL
Sbjct: 52 YALGQVSEVSPEIKALVGVGLLGALTTFSTFSNETLLLIQSGAWLKAFL 100
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTCNT 324
G IG R+ ++ + G A PFGTL+ N+ + +M + + + ++
Sbjct: 11 GSIGAVFRYLISIFMVQLFGSA-----FPFGTLLVNIIGSFLMGVIYALGQV--SEVSPE 63
Query: 325 VASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAY 360
+ + + GLLG L+T STF E + +S + +A+
Sbjct: 64 IKALVGVGLLGALTTFSTFSNETLLLIQSGAWLKAF 99
>sp|P61384|CRCB1_STAAN Protein CrcB homolog 1 OS=Staphylococcus aureus (strain N315)
GN=crcB1 PE=3 SV=1
Length = 147
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTLIAN++ A VM L + A +
Sbjct: 34 IGGALGALLRYLISFLNTDG--------GFPIGTLIANLTGAFVMGLLTALTIAFFSNH- 84
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 85 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----VTSYVFGILLCYVGI 140
Query: 383 WTKG 386
G
Sbjct: 141 KLGG 144
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 30 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLIANLTGAFVMGLLTAL---TI 78
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 79 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 112
>sp|P61382|CRCB1_STAAM Protein CrcB homolog 1 OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=crcB1 PE=3 SV=1
Length = 147
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTLIAN++ A VM L + A +
Sbjct: 34 IGGALGALLRYLISFLNTDG--------GFPIGTLIANLTGAFVMGLLTALTIAFFSNH- 84
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 85 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----VTSYVFGILLCYVGI 140
Query: 383 WTKG 386
G
Sbjct: 141 KLGG 144
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 30 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLIANLTGAFVMGLLTAL---TI 78
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 79 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 112
>sp|Q8NW04|CRCB1_STAAW Protein CrcB homolog 1 OS=Staphylococcus aureus (strain MW2)
GN=crcB1 PE=3 SV=1
Length = 147
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTLIAN++ A VM L + A +
Sbjct: 34 IGGALGALLRYLISFLNTDG--------GFPIGTLIANLTGAFVMGLLTALTIAFFSNH- 84
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 85 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----VTSYVFGILLCYVGI 140
Query: 383 WTKG 386
G
Sbjct: 141 KLGG 144
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 30 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLIANLTGAFVMGLLTAL---TI 78
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 79 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 112
>sp|Q6G8E8|CRCB1_STAAS Protein CrcB homolog 1 OS=Staphylococcus aureus (strain MSSA476)
GN=crcB1 PE=3 SV=1
Length = 147
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTLIAN++ A VM L + A +
Sbjct: 34 IGGALGALLRYLISFLNTDG--------GFPIGTLIANLTGAFVMGLLTALTIAFFSNH- 84
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 85 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----VTSYVFGILLCYVGI 140
Query: 383 WTKG 386
G
Sbjct: 141 KLGG 144
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 30 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLIANLTGAFVMGLLTAL---TI 78
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 79 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 112
>sp|Q6GFS0|CRCB1_STAAR Protein CrcB homolog 1 OS=Staphylococcus aureus (strain MRSA252)
GN=crcB1 PE=3 SV=1
Length = 147
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTLIAN++ A VM L + A +
Sbjct: 34 IGGALGALLRYLISFLNTDG--------GFPIGTLIANLTGAFVMGLLTALTIAFFSNH- 84
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 85 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----VTSYVFGILLCYVGI 140
Query: 383 WTKG 386
G
Sbjct: 141 KLGG 144
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 30 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLIANLTGAFVMGLLTAL---TI 78
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 79 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 112
>sp|Q5HEZ3|CRCB1_STAAC Protein CrcB homolog 1 OS=Staphylococcus aureus (strain COL)
GN=crcB1 PE=3 SV=1
Length = 147
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTLIAN++ A VM L + A +
Sbjct: 34 IGGALGALLRYLISFLNTDG--------GFPIGTLIANLTGAFVMGLLTALTIAFFSNH- 84
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 85 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----VTSYVFGILLCYVGI 140
Query: 383 WTKG 386
G
Sbjct: 141 KLGG 144
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 30 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLIANLTGAFVMGLLTAL---TI 78
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 79 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 112
>sp|A8FV66|CRCB_SHESH Protein CrcB homolog OS=Shewanella sediminis (strain HAW-EB3)
GN=crcB PE=3 SV=1
Length = 124
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 67 LVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVV 122
++ +A+ G +G + RYLL +LFG + + L N++GSFLMG +
Sbjct: 4 ILFVALGGSIGAVFRYLLSIFMLQLFGSAFP---------FGTLLVNVIGSFLMGT--IY 52
Query: 123 FKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAF 169
G +S+VS + + G LG+LTTFS ++ + L L G W+ AF
Sbjct: 53 ALGQVSQVSPEIKALVGVGLLGALTTFSTFSNETLLLIQSGAWIKAF 99
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTCNT 324
G IG R+ L+ + G A PFGTL+ NV + +M + + + ++
Sbjct: 11 GSIGAVFRYLLSIFMLQLFGSA-----FPFGTLLVNVIGSFLMGTIYALGQV--SQVSPE 63
Query: 325 VASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAY 360
+ + + GLLG L+T STF E + +S + +A+
Sbjct: 64 IKALVGVGLLGALTTFSTFSNETLLLIQSGAWIKAF 99
>sp|Q2FXE6|CRCB1_STAA8 Protein CrcB homolog 1 OS=Staphylococcus aureus (strain NCTC 8325)
GN=crcB1 PE=3 SV=1
Length = 121
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTLIAN++ A VM L + A +
Sbjct: 8 IGGALGALLRYLISFLNTDG--------GFPIGTLIANLTGAFVMGLLTALTIAFFSNH- 58
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 59 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----VTSYVFGILLCYVGI 114
Query: 383 WTKG 386
G
Sbjct: 115 KLGG 118
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 4 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLIANLTGAFVMGLLTAL---TI 52
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 53 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 86
>sp|B9M837|CRCB_GEOSF Protein CrcB homolog OS=Geobacter sp. (strain FRC-32) GN=crcB PE=3
SV=1
Length = 124
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGD 126
++ + +FG LG L RY L V G+ N++G+FL+G + F
Sbjct: 4 VIFIGIFGALGCLCRYYLSGWVYDIVGRAFPYGT-----FAVNIIGAFLIGLI-MEFSLR 57
Query: 127 ISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
+ VS L +GL G+LG LTTFS ++ + L DG ++A
Sbjct: 58 STLVSPQLRVGLTIGFLGGLTTFSTFSYETFRLLEDGELLIA 99
>sp|Q929T6|CRCB2_LISIN Protein CrcB homolog 2 OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=crcB2 PE=3 SV=1
Length = 129
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 19/107 (17%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPS-----NMVGSFLMGWWGV 121
+++ +FG LG + RY + G D PS N++G FL+ + +
Sbjct: 3 FLYVGIFGALGGMCRYAMNLWLGGG-------------DFPSATLAVNLIGCFLLAFI-M 48
Query: 122 VFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
F + S++S L+ G+ TG++G+ TTFS ++ ++L G VLA
Sbjct: 49 PFLAEKSRISLVLLNGIGTGFIGAFTTFSAFSVDTIELLQQGEVVLA 95
>sp|P61390|CRCB1_LACJO Protein CrcB homolog 1 OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=crcB1 PE=3 SV=1
Length = 129
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 106 LPSNMVGSFLMGWWGVVFKGDISKVSDYLVIGLNTGYLGSLTTFSGWN---QKMLDLTVD 162
L +N++G FL+ ++ F + + D+LV GL+TG++GS TTFS +N K L+ ++
Sbjct: 35 LTANIIGCFLLAFFTYFFV-EYREGRDWLVTGLSTGFVGSFTTFSSFNLDTLKQLESGMN 93
Query: 163 GHWVLAFL-GFFIGLFLASHSIIFGIETAK 191
+ F FIG A ++ G T +
Sbjct: 94 SQATIYFFSSIFIGFLFAYLGMLVGKRTGR 123
>sp|P61389|CRCB_GEOSL Protein CrcB homolog OS=Geobacter sulfurreducens (strain ATCC 51573
/ DSM 12127 / PCA) GN=crcB PE=3 SV=1
Length = 140
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 14/107 (13%)
Query: 63 YISCLVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYL--DLPSNMVGSFLMGWWG 120
+++ ++ +AVFG +G ++RYLL GV + + L N++G+FL+G
Sbjct: 16 FMTTILAIAVFGAVGCVARYLL-------AGGVYALAGRAFPWGTLAVNVIGAFLIG--- 65
Query: 121 VVFKGDISK--VSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHW 165
++ + + +S L +GL G+LG TTFS ++ + L DG +
Sbjct: 66 LIMEAALRTTLMSQELRLGLTIGFLGGFTTFSTFSYETFKLLEDGEF 112
>sp|Q2YTK5|CRCB1_STAAB Protein CrcB homolog 1 OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=crcB1 PE=3 SV=2
Length = 121
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 263 IVGPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTC 322
I G +G +R+ ++ LN G P GTL+AN++ A +M L + A +
Sbjct: 8 IGGALGALLRYLISFLNTDG--------GFPIGTLVANLTGAFIMGLLTALTIAFFSNH- 58
Query: 323 NTVASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISFGLGILIYSVPV 382
T+ I G LG L+T STF E M + YA + S+ GIL+ V +
Sbjct: 59 PTLKKAITTGFLGALTTFSTFQLELIHMFDHQQFITLLLYA----ITSYVFGILLCYVGI 114
Query: 383 WTKG 386
G
Sbjct: 115 KLGG 118
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
V++ + G LG L RYL+ L +DG L +N+ G+F+MG + I
Sbjct: 4 VYIFIGGALGALLRYLISFL--------NTDGGFPIGTLVANLTGAFIMGLLTAL---TI 52
Query: 128 SKVSDY--LVIGLNTGYLGSLTTFSGWNQKMLDL 159
+ S++ L + TG+LG+LTTFS + +++ +
Sbjct: 53 AFFSNHPTLKKAITTGFLGALTTFSTFQLELIHM 86
>sp|Q24VQ6|CRCB1_DESHY Protein CrcB homolog 1 OS=Desulfitobacterium hafniense (strain Y51)
GN=crcB1 PE=3 SV=1
Length = 114
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 75 ILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWW-GVVFKGDISKVSDY 133
+ G + RYL+ F +D + L N++GSFL+ W VFK ++S +
Sbjct: 1 MFGAMLRYLIGISF-------FADSRFPWATLTINLLGSFLLAWLTSYVFKK--VRLSPH 51
Query: 134 LVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
L + TG++GS TTFS + + + L DGH LA
Sbjct: 52 LSTAIGTGFVGSFTTFSTLSVETISLFQDGHNFLA 86
>sp|Q8CS29|CRCB1_STAES Protein CrcB homolog 1 OS=Staphylococcus epidermidis (strain ATCC
12228) GN=crcB1 PE=3 SV=1
Length = 121
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTCNT 324
G +G IR+ L+ LN + T +P GT +AN+ A +M ++ + ++ KT
Sbjct: 10 GALGALIRFCLSMLN-----EGST---IPLGTFVANLLGAFLMGSIGALSLSLF-KTHPN 60
Query: 325 VASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITI--LISFGLGIL 376
+ G+ GLLG L+T STF E + + + + L TI + S+ LGIL
Sbjct: 61 IKKGLTTGLLGALTTFSTFQFEL------VTLFNQHHFILFTIYGVTSYILGIL 108
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYL-DLPSNMVGSFLMGWWGVVFKGD 126
+++ V G LG L R+ L L ++GS + L +N++G+FLMG G +
Sbjct: 4 LYIFVGGALGALIRFCLSML---------NEGSTIPLGTFVANLLGAFLMGSIGAL-SLS 53
Query: 127 ISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVL 167
+ K + GL TG LG+LTTFS + +++ L H++L
Sbjct: 54 LFKTHPNIKKGLTTGLLGALTTFSTFQFELVTLFNQHHFIL 94
>sp|Q5HND1|CRCB1_STAEQ Protein CrcB homolog 1 OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=crcB1 PE=3 SV=1
Length = 121
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTCNT 324
G +G IR+ L+ LN + T +P GT +AN+ A +M ++ + ++ KT
Sbjct: 10 GALGALIRFCLSMLN-----EGST---IPLGTFVANLLGAFLMGSIGALSLSLF-KTHPN 60
Query: 325 VASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITI--LISFGLGIL 376
+ G+ GLLG L+T STF E + + + + L TI + S+ LGIL
Sbjct: 61 IKKGLTTGLLGALTTFSTFQFEL------VTLFNQHHFILFTIYGVTSYILGIL 108
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYL-DLPSNMVGSFLMGWWGVVFKGD 126
+++ V G LG L R+ L L ++GS + L +N++G+FLMG G +
Sbjct: 4 LYIFVGGALGALIRFCLSML---------NEGSTIPLGTFVANLLGAFLMGSIGAL-SLS 53
Query: 127 ISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVL 167
+ K + GL TG LG+LTTFS + +++ L H++L
Sbjct: 54 LFKTHPNIKKGLTTGLLGALTTFSTFQFELVTLFNQHHFIL 94
>sp|A5IL48|CRCB_THEP1 Protein CrcB homolog OS=Thermotoga petrophila (strain RKU-1 / ATCC
BAA-488 / DSM 13995) GN=crcB PE=3 SV=1
Length = 127
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAAL--ATVKKAVDTKTC 322
G IG +R+ ++R L ++P GT+I N + ++ L A ++K +K
Sbjct: 13 GAIGAVLRYLVSRTINSLL----PFSYIPLGTIIVNSVGSFFLSFLMFAAIEKVPLSK-- 66
Query: 323 NTVASGIQF---GLLGCLSTVSTFMAEFNAMRESTSPWRAYAYALITILISF 371
I F GLLG +T STF E ++ E SP R AYAL+ +L +F
Sbjct: 67 ----EAILFFGTGLLGAFTTFSTFTYETLSLIEE-SPARGVAYALVNLLFAF 113
>sp|A5IH85|CRCB_LEGPC Protein CrcB homolog OS=Legionella pneumophila (strain Corby)
GN=crcB PE=3 SV=1
Length = 134
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 70 LAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDISK 129
+A+ G LG +SRYL+ + + G+ Y L N +GSFL G++ +V G S
Sbjct: 9 VAIGGSLGAMSRYLV-TIMAQNAWGIKFP----YGTLLVNTLGSFLAGFFLIVLVGRFSA 63
Query: 130 VSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHW 165
+ + L TG+LG+ TTFS + + L + G+W
Sbjct: 64 EESFRLF-LFTGFLGAFTTFSSFAAESLFMFEQGYW 98
>sp|Q5X7N1|CRCB_LEGPA Protein CrcB homolog OS=Legionella pneumophila (strain Paris)
GN=crcB PE=3 SV=1
Length = 134
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 70 LAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDISK 129
+A+ G LG +SRYL+ + + G+ Y L N +GSFL G++ +V G S
Sbjct: 9 VAIGGSLGAMSRYLV-TIMAQNAWGIKFP----YGTLLVNTLGSFLAGFFLIVLVGRFSA 63
Query: 130 VSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHW 165
+ + L TG+LG+ TTFS + + L + G+W
Sbjct: 64 EESFRLF-LFTGFLGAFTTFSSFAAESLFMFEQGYW 98
>sp|Q5WZ32|CRCB_LEGPL Protein CrcB homolog OS=Legionella pneumophila (strain Lens)
GN=crcB PE=3 SV=1
Length = 134
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 70 LAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDISK 129
+A+ G LG +SRYL+ + + G+ Y L N +GSFL G++ +V G S
Sbjct: 9 VAIGGSLGAMSRYLV-TIMAQNAWGIKFP----YGTLLVNTLGSFLAGFFLIVLVGRFSA 63
Query: 130 VSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHW 165
+ + L TG+LG+ TTFS + + L + G+W
Sbjct: 64 EESFRLF-LFTGFLGAFTTFSSFAAESLFMFEQGYW 98
>sp|Q5ZY60|CRCB_LEGPH Protein CrcB homolog OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=crcB
PE=3 SV=1
Length = 134
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 70 LAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDISK 129
+A+ G LG +SRYL+ + + G+ Y L N +GSFL G++ +V G S
Sbjct: 9 VAIGGSLGAMSRYLV-TIMAQNAWGIKFP----YGTLLVNTLGSFLAGFFLIVLVGRFSA 63
Query: 130 VSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHW 165
+ + L TG+LG+ TTFS + + L + G+W
Sbjct: 64 EESFRLF-LFTGFLGAFTTFSSFAAESLFMFEQGYW 98
>sp|Q49YL2|CRCB2_STAS1 Protein CrcB homolog 2 OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=crcB2
PE=3 SV=1
Length = 121
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTCNT 324
G +G +R+ L+ +N T +P GT IAN+ A +M L T+ +
Sbjct: 10 GAVGALLRYLLSFIN--------TSFEMPIGTFIANLCGAFLMGFLGTLAIQYFNNS-PM 60
Query: 325 VASGIQFGLLGCLSTVSTFMAEFNAMRESTSPWRAYAYAL 364
+ GI G +G L+T STF E ES S YAL
Sbjct: 61 LKKGITTGFIGSLTTFSTFQFELVQFFESGSFILLIVYAL 100
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 108 SNMVGSFLMGWWGVVFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVL 167
+N+ G+FLMG+ G + + S L G+ TG++GSLTTFS + +++ G ++L
Sbjct: 36 ANLCGAFLMGFLGTLAIQYFNN-SPMLKKGITTGFIGSLTTFSTFQFELVQFFESGSFIL 94
>sp|B3E5K6|CRCB_GEOLS Protein CrcB homolog OS=Geobacter lovleyi (strain ATCC BAA-1151 /
DSM 17278 / SZ) GN=crcB PE=3 SV=1
Length = 125
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 103 YLDLPSNMVGSFLMGWWGVVFKGDI--SKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLT 160
Y L N++G++ +G ++ + + + +SD L IGL G++G LTTFS ++ + L
Sbjct: 35 YGTLVVNIIGAYCIG---LIMELGLRSTMLSDTLRIGLTVGFMGGLTTFSTFSYETFKLL 91
Query: 161 VDGHWVLAF 169
DG +V+AF
Sbjct: 92 EDGQFVMAF 100
>sp|Q815R6|CRCB1_BACCR Protein CrcB homolog 1 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=crcB1 PE=3 SV=1
Length = 144
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 74 GILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDISKVSDY 133
GILG LSRY L G ++ S L N++G F + W + ++ +
Sbjct: 20 GILGALSRYYL----GLNITTFWHH-SFPLATLLINLIGCFFLAWL-TTYIARLNILPSE 73
Query: 134 LVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFL 170
++ G+ TG++GS TTFS ++ + + L W +AFL
Sbjct: 74 VITGIGTGFIGSFTTFSTFSVETVQLINHSEWSIAFL 110
>sp|Q5FKD2|CRCB1_LACAC Protein CrcB homolog 1 OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=crcB1 PE=3 SV=1
Length = 129
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 68 VHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDI 127
+ +A+F G ++R L FG Y N++G FL+ ++ +F +
Sbjct: 9 ISIAIFAFFGGIARAWLNSSFG------------FYGTFWGNIIGCFLLAFFTYLFM-EF 55
Query: 128 SKVSDYLVIGLNTGYLGSLTTFSGWNQKML 157
V +L +GL TG++G+ TTFS +N +L
Sbjct: 56 KDVRQWLTVGLGTGFVGAFTTFSTFNLDVL 85
>sp|P61386|CRCB1_BACC1 Protein CrcB homolog 1 OS=Bacillus cereus (strain ATCC 10987)
GN=crcB1 PE=3 SV=1
Length = 137
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 74 GILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFKGDISKVSDY 133
GILG LSRY L G ++ L L N+VG FL+ W + + +
Sbjct: 13 GILGALSRYYL----GLTIHEFWHHTFPL-ATLLINLVGCFLLAWL-TTYIAQRNILPAE 66
Query: 134 LVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFL 170
++ G+ TG++GS TTFS ++ + + L W +AFL
Sbjct: 67 IITGIGTGFIGSFTTFSTFSVETIQLINHSEWSIAFL 103
>sp|Q12NE6|CRCB_SHEDO Protein CrcB homolog OS=Shewanella denitrificans (strain OS217 /
ATCC BAA-1090 / DSM 15013) GN=crcB PE=3 SV=1
Length = 124
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 64 ISCLVHLAVFGILGVLSRYLLE----KLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWW 119
++ L+ +A+ G +G + RYL+ +LFG S + L N++GSF MG
Sbjct: 1 MTNLLFVALGGSIGAVLRYLMSIIMIQLFGSSFP---------FGTLLVNVLGSFFMG-- 49
Query: 120 GVVFK-GDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHW 165
+V+ G +S VS L + G LG+LTTFS ++ + L L G+W
Sbjct: 50 -IVYALGQVSHVSPELKALVGVGLLGALTTFSTFSNETLLLMQQGYW 95
>sp|B8CP83|CRCB_SHEPW Protein CrcB homolog OS=Shewanella piezotolerans (strain WP3 / JCM
13877) GN=crcB PE=3 SV=1
Length = 124
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 106 LPSNMVGSFLMGWWGVVFK-GDISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGH 164
L N++GSFLMG VV+ G +S+VS + + G LG+LTTFS ++ + L L +G+
Sbjct: 38 LMVNILGSFLMG---VVYALGQVSEVSPEIKAFIGVGMLGALTTFSTFSNESLLLMQEGY 94
Query: 165 WVLAFL 170
V A L
Sbjct: 95 LVKAIL 100
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 265 GPIGVWIRWFLARLNGRGLGKAGTLRWVPFGTLIANVSAACVMAALATVKKAVDTKTCNT 324
G IG +R+ ++ L + G PFGTL+ N+ + +M + + + ++
Sbjct: 11 GSIGAVLRYLISILMLQVFGSG-----FPFGTLMVNILGSFLMGVVYALGQV--SEVSPE 63
Query: 325 VASGIQFGLLGCLSTVSTFMAE 346
+ + I G+LG L+T STF E
Sbjct: 64 IKAFIGVGMLGALTTFSTFSNE 85
>sp|Q0HV56|CRCB_SHESR Protein CrcB homolog OS=Shewanella sp. (strain MR-7) GN=crcB PE=3
SV=1
Length = 124
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFK-G 125
L+ +A+ G +G + RYL+ +F V G S + L N++GSFLMG V++ G
Sbjct: 4 LLLVALGGSIGAVFRYLIS-IFMIQVFG----SSFPFGTLLVNVLGSFLMG---VIYALG 55
Query: 126 DISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
+S +S L + G LG+LTTFS ++ + L L +G W+ A
Sbjct: 56 QMSHISPELKALIGVGLLGALTTFSTFSNETLLLMQEGDWLKA 98
>sp|Q0HIS8|CRCB_SHESM Protein CrcB homolog OS=Shewanella sp. (strain MR-4) GN=crcB PE=3
SV=1
Length = 124
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFK-G 125
L+ +A+ G +G + RYL+ +F V G S + L N++GSFLMG V++ G
Sbjct: 4 LLLVALGGSIGAVFRYLIS-IFMIQVFG----SSFPFGTLLVNVLGSFLMG---VIYALG 55
Query: 126 DISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
+S +S L + G LG+LTTFS ++ + L L +G W+ A
Sbjct: 56 QMSHISPELKALIGVGLLGALTTFSTFSNETLLLMQEGDWLKA 98
>sp|A0KWW4|CRCB_SHESA Protein CrcB homolog OS=Shewanella sp. (strain ANA-3) GN=crcB PE=3
SV=1
Length = 124
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 67 LVHLAVFGILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFK-G 125
L+ +A+ G +G + RYL+ +F V G S + L N++GSFLMG V++ G
Sbjct: 4 LLLVALGGSIGAVFRYLIS-IFMIQVFG----SSFPFGTLLVNVLGSFLMG---VIYALG 55
Query: 126 DISKVSDYLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLA 168
+S +S L + G LG+LTTFS ++ + L L +G W+ A
Sbjct: 56 QMSHISPELKALIGVGLLGALTTFSTFSNETLLLMQEGDWLKA 98
>sp|A1RJJ3|CRCB_SHESW Protein CrcB homolog OS=Shewanella sp. (strain W3-18-1) GN=crcB
PE=3 SV=1
Length = 124
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 74 GILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFK-GDISKVSD 132
G +G + RYL+ +F V G S + L N++GSF MG V++ G +S +S
Sbjct: 11 GSIGAVFRYLIS-IFMIQVFG----SSFPFGTLVVNVIGSFFMG---VIYALGQMSHISP 62
Query: 133 YLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFL 170
L + G LG+LTTFS ++ + L L +G W+ A L
Sbjct: 63 ELKALIGVGLLGALTTFSTFSNETLLLLQEGDWLKAIL 100
>sp|A4Y6Z6|CRCB_SHEPC Protein CrcB homolog OS=Shewanella putrefaciens (strain CN-32 /
ATCC BAA-453) GN=crcB PE=3 SV=1
Length = 124
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 74 GILGVLSRYLLEKLFGPSVAGVTSDGSILYLDLPSNMVGSFLMGWWGVVFK-GDISKVSD 132
G +G + RYL+ +F V G S + L N++GSF MG V++ G +S +S
Sbjct: 11 GSIGAVFRYLIS-IFMIQVFG----SSFPFGTLVVNVIGSFFMG---VIYALGQMSHISP 62
Query: 133 YLVIGLNTGYLGSLTTFSGWNQKMLDLTVDGHWVLAFL 170
L + G LG+LTTFS ++ + L L +G W+ A L
Sbjct: 63 ELKALIGVGLLGALTTFSTFSNETLLLLQEGDWLKAIL 100
>sp|Q9V0X2|CRCB_PYRAB Protein CrcB homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=crcB PE=3 SV=1
Length = 123
Score = 38.5 bits (88), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 102 LYLDLP-----SNMVGSFLMGW-WGVVFKGDISKVSDYLVIGLNTGYLGSLTTFSGWNQK 155
+Y D P N + SF++G+ +G++F G +VS I L TG+ G L+TFS ++ +
Sbjct: 29 VYKDFPLGTLLVNSIASFILGYLYGLLFFG--FEVSSEWRIFLGTGFCGGLSTFSTFSYE 86
Query: 156 MLDLTVDGHWVLAFL 170
L +G ++LAF+
Sbjct: 87 TFSLLREGEYLLAFM 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,723,989
Number of Sequences: 539616
Number of extensions: 6237647
Number of successful extensions: 15564
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 15252
Number of HSP's gapped (non-prelim): 497
length of query: 388
length of database: 191,569,459
effective HSP length: 119
effective length of query: 269
effective length of database: 127,355,155
effective search space: 34258536695
effective search space used: 34258536695
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)