Your job contains 1 sequence.
>016504
MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR
DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCSLEFDKQLGPYT
LSQYGEWKRLSSYITKSIIERIEPIGGEITVTAESGMMKNTPKSTMERALDEQLKTSKFT
ASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKNYGGSEDTLLGEL
QFAFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIKVIYYQLKYGLQKDR
NGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTWTRKLRELLENSLGW
EFQQSSAVDGMYFEENDEYAPVVEMLDE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016504
(388 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2028992 - symbol:AT1G66510 "AT1G66510" species... 1421 1.9e-145 1
ZFIN|ZDB-GENE-040704-68 - symbol:aar2 "AAR2 splicing fact... 400 3.0e-37 1
MGI|MGI:1915545 - symbol:Aar2 "AAR2 splicing factor homol... 357 1.1e-32 1
WB|WBGene00008639 - symbol:F10B5.2 species:6239 "Caenorha... 353 2.9e-32 1
ASPGD|ASPL0000006654 - symbol:AN10758 species:162425 "Eme... 114 1.8e-10 2
SGD|S000000170 - symbol:AAR2 "Component of the U5 snRNP c... 157 1.1e-08 1
>TAIR|locus:2028992 [details] [associations]
symbol:AT1G66510 "AT1G66510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] EMBL:CP002684 HOGENOM:HOG000230890
KO:K13205 OMA:FFSSACS InterPro:IPR007946 PANTHER:PTHR12689
Pfam:PF05282 EMBL:AC074025 EMBL:AY052224 EMBL:AY060499
IPI:IPI00528649 PIR:G96690 RefSeq:NP_564876.1 RefSeq:NP_849850.1
UniGene:At.26432 UniGene:At.35761 PRIDE:Q9C711 DNASU:842969
EnsemblPlants:AT1G66510.1 EnsemblPlants:AT1G66510.2 GeneID:842969
KEGG:ath:AT1G66510 TAIR:At1g66510 InParanoid:Q9C711
PhylomeDB:Q9C711 ProtClustDB:CLSN2689047 Genevestigator:Q9C711
Uniprot:Q9C711
Length = 399
Score = 1421 (505.3 bits), Expect = 1.9e-145, P = 1.9e-145
Identities = 271/390 (69%), Positives = 316/390 (81%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MD E ALELVKHGATLL LDVPQYTL GIDTQ+F+VGP+FKGIKMIPPG+HFVFYSSS+R
Sbjct: 1 MDSEKALELVKHGATLLFLDVPQYTLVGIDTQIFAVGPAFKGIKMIPPGIHFVFYSSSTR 60
Query: 61 DGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYT 120
DG+EFSP IGFF+D PS+VIVRKW+QQ RY+QAV SLEFDK LGPY
Sbjct: 61 DGREFSPTIGFFVDVAPSQVIVRKWNQQDEWLTKVSEEEEERYSQAVRSLEFDKNLGPYN 120
Query: 121 LSQYGEWKRLSSYITKSXXXXXXXXXXXXTVTAESGMMKNTPKSTMERALDEQLKTSKFT 180
L QYGEW+ LS+YITK TVT ES ++K PK+ ME ALD Q+K SKFT
Sbjct: 121 LKQYGEWRHLSNYITKDVVEKFEPVGGEITVTYESAILKGGPKTAMEIALDTQMKKSKFT 180
Query: 181 ASVDSSQKKG--CYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKNYGGSEDTLLG 238
S + Q KG YYTSIPR++K +GM G+ELTS+NLDKT+LLES+++K Y SED LLG
Sbjct: 181 TS-STEQPKGNRFYYTSIPRIIKHKGMSGQELTSMNLDKTQLLESVLSKEYKDSEDLLLG 239
Query: 239 ELQFAFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIKVIYYQLKYGLQK 298
ELQF+F+AFLMGQSLE+F+QWKS+VSLL GC+ AP TRSQLFT FIKVIY+QLKYGLQK
Sbjct: 240 ELQFSFVAFLMGQSLESFMQWKSIVSLLLGCTSAPFQTRSQLFTKFIKVIYHQLKYGLQK 299
Query: 299 DRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTWTRKLRELLENSL 358
+ +G ETG ALLDDSWL++DSFLH LCKDFFAL+++ SVVDGDLL+WTRK +ELLEN L
Sbjct: 300 ENSGPETGIHALLDDSWLASDSFLHFLCKDFFALVEETSVVDGDLLSWTRKFKELLENRL 359
Query: 359 GWEFQQSSAVDGMYFEENDEYAPVVEMLDE 388
GWEFQ+ SAVDG+YFEE+DEYAPVVEMLDE
Sbjct: 360 GWEFQKKSAVDGIYFEEDDEYAPVVEMLDE 389
>ZFIN|ZDB-GENE-040704-68 [details] [associations]
symbol:aar2 "AAR2 splicing factor homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-040704-68 eggNOG:NOG319701 HOGENOM:HOG000230890
KO:K13205 InterPro:IPR007946 PANTHER:PTHR12689 Pfam:PF05282
CTD:25980 HOVERGEN:HBG051148 OrthoDB:EOG4WQ12M EMBL:BC072724
IPI:IPI00498954 RefSeq:NP_001002221.1 UniGene:Dr.18910
STRING:Q6GQL8 PRIDE:Q6GQL8 GeneID:431768 KEGG:dre:431768
InParanoid:Q6GQL8 NextBio:20830998 ArrayExpress:Q6GQL8 Bgee:Q6GQL8
Uniprot:Q6GQL8
Length = 384
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 116/375 (30%), Positives = 178/375 (47%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A L + GATL+LL VP+ T G+D + +++GP F+G+KMIPPG+HF+ Y S S
Sbjct: 6 MDPEVARGLFEEGATLVLLGVPEGTELGLDYKTWTLGPRFRGVKMIPPGLHFLHYCSVST 65
Query: 61 DGK--EFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGP 118
+G E SP G F+ P +V+V W++ +A E D+ LGP
Sbjct: 66 NGGCGEISPKTGLFLSLKPRQVLVAHWNKSADDLEISQNSEEVERVRANLK-ELDRYLGP 124
Query: 119 YTLSQYGEW----KRLSSYITKSXXXXXXXXXXXXTVTAESGMM--KNTPKSTMERALDE 172
Y +W RLS + + V E + K+ + + R D+
Sbjct: 125 YPYDTLRKWVSLTDRLSQEVAVALQPLSGRVCAFSDVIPELQLTHTKDRVQQNLSRN-DQ 183
Query: 173 QLKTSK--FTASVDSSQKKGCY--YTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKN 228
+ ++ K Q++G ++SIP+ G ++T ++D++ L +++ ++
Sbjct: 184 ECQSMKEGLDRLPRMKQREGTELRFSSIPKQAYPPGATPAQITQYSMDRSYTLNAVLERH 243
Query: 229 YGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGC-SEAPLHTRSQLFTMFIKV 287
Y +LGELQFAF+ FL+G EAF WKSL++LL C SE + R +L+ I V
Sbjct: 244 YKEQPLNVLGELQFAFVCFLVGNVYEAFEHWKSLLALL--CRSEEAMKDRKELYLGLIAV 301
Query: 288 IYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTWT 347
+Y+QL G E LD +S +FL +DFF V D L
Sbjct: 302 LYHQL---------G-EIPPDFFLDI--VSQSNFLTSTLQDFFQFASSPGV-DSTLRKRA 348
Query: 348 RKLRELLENSLGWEF 362
K + L W+F
Sbjct: 349 EKFKVHLTKKFRWDF 363
>MGI|MGI:1915545 [details] [associations]
symbol:Aar2 "AAR2 splicing factor homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1915545
eggNOG:NOG319701 GeneTree:ENSGT00390000007796 HOGENOM:HOG000230890
KO:K13205 OMA:FFSSACS InterPro:IPR007946 PANTHER:PTHR12689
Pfam:PF05282 EMBL:AK018741 EMBL:AK166203 EMBL:AK169526
EMBL:AL929153 EMBL:CH466551 EMBL:BC019988 EMBL:BC020112
IPI:IPI00316471 RefSeq:NP_001158290.1 RefSeq:NP_080937.3
UniGene:Mm.253648 ProteinModelPortal:Q9D2V5 PhosphoSite:Q9D2V5
PaxDb:Q9D2V5 PRIDE:Q9D2V5 Ensembl:ENSMUST00000029158
Ensembl:ENSMUST00000109570 GeneID:68295 KEGG:mmu:68295 CTD:25980
HOVERGEN:HBG051148 InParanoid:Q3TEN8 OrthoDB:EOG4WQ12M
NextBio:326945 Bgee:Q9D2V5 CleanEx:MM_0610011L14RIK
Genevestigator:Q9D2V5 GermOnline:ENSMUSG00000027628 Uniprot:Q9D2V5
Length = 384
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 108/375 (28%), Positives = 183/375 (48%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A +L GAT+++L++P+ T FGID + VGP F+G+KMIPPG+HF++YSS +
Sbjct: 6 MDPELAKQLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLYYSSVDK 65
Query: 61 -DGKEFSPIIGFFIDAGPSEVIVRKWDQ-QXXXXXXXXXXXXARYTQAVCSLEFDKQLGP 118
+ +E P +GFF+ + V +W+ Q +A + D+ LGP
Sbjct: 66 ANPREVGPRMGFFLSLKQRGLTVLRWNAVQEEVDLSPAPEAEVEAMRANLP-DLDQFLGP 124
Query: 119 YTLSQYGEWKRLSSYITKSXXXXXXXXXXXXTVTAESG---MMKNTPKSTMERALD---- 171
Y + +W L+++I+++ ++ MK+T K + + L
Sbjct: 125 YPYATLKKWISLTNFISEATMEKLQPESRQICAFSDVLPVLFMKHT-KDRVGQNLPLCGT 183
Query: 172 EQLKTSKFTASVDSSQKKG---CYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKN 228
E + A + + + ++ +P + G E+T ++D + LE++++K
Sbjct: 184 ECRSYQEGLARLPEMRPRAGTEIRFSELPTQMFPAGATPAEITRHSMDLSYALETVLSKQ 243
Query: 229 YGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGC-SEAPLHTRSQLFTMFIKV 287
+ G+ +LGELQFAF+ FL+G EAF WK L++LL C SE+ + L+ I +
Sbjct: 244 FPGNPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLL--CRSESAMGKYHALYISLISI 301
Query: 288 IYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTWT 347
+Y+QL G E A +D +S D+FL + FF+ +V + L
Sbjct: 302 LYHQL---------G-EIPADFFVDI--VSQDNFLTSTLQVFFSSACSIAV-EATLRKKA 348
Query: 348 RKLRELLENSLGWEF 362
K + L W+F
Sbjct: 349 EKFQAHLTKKFRWDF 363
>WB|WBGene00008639 [details] [associations]
symbol:F10B5.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 EMBL:Z48334 PIR:T20689
RefSeq:NP_495708.1 ProteinModelPortal:Q09305 DIP:DIP-26090N
IntAct:Q09305 MINT:MINT-1064229 PaxDb:Q09305 EnsemblMetazoa:F10B5.2
GeneID:184284 KEGG:cel:CELE_F10B5.2 UCSC:F10B5.2 CTD:184284
WormBase:F10B5.2 eggNOG:NOG319701 GeneTree:ENSGT00390000007796
HOGENOM:HOG000230890 InParanoid:Q09305 KO:K13205 OMA:FFSSACS
NextBio:924206 InterPro:IPR007946 PANTHER:PTHR12689 Pfam:PF05282
Uniprot:Q09305
Length = 357
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 110/375 (29%), Positives = 174/375 (46%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
+ PE + ++GA LL L PQ + FGID + + G F G+KMIPPGVHFV+ S S
Sbjct: 5 LPPEIVDYMYRNGAFLLFLGFPQASEFGIDYKSWKTGEKFMGLKMIPPGVHFVYCSIKS- 63
Query: 61 DGKEFSPIIGFFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLE-FDKQLGPY 119
+P IGFF + E++V+KW+ + + ++ L+ D L PY
Sbjct: 64 -----APRIGFFHNFKAGEILVKKWNTESETFEDEEVPTD-QISEKKRQLKNMDSSLAPY 117
Query: 120 TLSQYGEWKRLSSYITKSXXXXXXXXXXXXTVTAESGMMKNTPKSTMERALDEQLKTSKF 179
Y W L+ +IT T AE + + ME A +++ K S F
Sbjct: 118 PYENYRSWYGLTDFITADTVERIHPILGRITSQAE---LVSLETEFMENA-EKEHKDSHF 173
Query: 180 TASVDSSQKKGCYYTS---IPRVVKCR-G--MQGEELTSLNLDKT----ELLESL--ITK 227
VD +T +P ++K R G ++ +++ L + + E + L + +
Sbjct: 174 RNRVDRENPVRTRFTDQHGLP-IMKIREGYEIRFQDIPPLTVSQNRVGIEYSDRLYRLLR 232
Query: 228 NYGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIKV 287
GG LL E+Q AF+ FL GQ E F QWK ++ L+ C + L + +LF FI+V
Sbjct: 233 ALGGDWKQLLAEMQIAFVCFLQGQVFEGFEQWKRIIHLMSCCPNS-LGSEKELFMSFIRV 291
Query: 288 IYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTWT 347
+++QLK E +D +S D+FL FA ++D++ DL T
Sbjct: 292 LFFQLK----------ECPTDFFVDI--VSRDNFLTTTLSMLFANVRDSAHAGDDLKKKT 339
Query: 348 RKLRELLENSLGWEF 362
+ ++ L N W+F
Sbjct: 340 AQFKQYLTNQFKWDF 354
>ASPGD|ASPL0000006654 [details] [associations]
symbol:AN10758 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007946 PANTHER:PTHR12689 Pfam:PF05282
EMBL:BN001301 EnsemblFungi:CADANIAT00007068 HOGENOM:HOG000163294
OMA:WREGAIG Uniprot:C8V3E4
Length = 479
Score = 114 (45.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 47/174 (27%), Positives = 72/174 (41%)
Query: 233 EDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIKVIYYQL 292
E +LGELQF F+ L + QWK L+ L+ C A + R+ ++++ QL
Sbjct: 311 EAQILGELQFTFLMGLTLMNYSCLQQWKRLLGLILTCRSA-ITDRAPFMAEALRLLLTQL 369
Query: 293 KYGLQKDRNGTETGA-SALLDDSWLSADSFLHHLCKDF----FALIQDASVVDGDLLTWT 347
K + E G L ++ FL L K F + +++D + +
Sbjct: 370 KRA-----DDVEGGLFDQLGNEGGAEGGEFLRRLLKGFRTAMYEVLEDRG--ESPVKREF 422
Query: 348 RKLRELLENSLGWEFQQSSAV--------DG------MYFEENDEYAPVVEMLD 387
KL E + L WE + + + DG M E +EYAPVV LD
Sbjct: 423 GKLEEWVRRELDWELDRDAVLRKGMVQLEDGEEVELEMVDHEEEEYAPVVVELD 476
Score = 108 (43.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 15 TLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSRDGKEFSPIIGFFID 74
TLL+ +P TL GID F+ P+F GI+ IPPG HFV+ +++ G F++D
Sbjct: 9 TLLIPHLPPKTLVGIDLITFTSTPNFHGIRDIPPGWHFVYTGTTA--GLSLRLGGWFYVD 66
Query: 75 AGPS-------EVIVRKWD 86
G S +++V +W+
Sbjct: 67 RGNSTETEIGKDILVWRWN 85
>SGD|S000000170 [details] [associations]
symbol:AAR2 "Component of the U5 snRNP complex" species:4932
"Saccharomyces cerevisiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0000244 "assembly of spliceosomal tri-snRNP"
evidence=IMP] [GO:0005682 "U5 snRNP" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] SGD:S000000170 GO:GO:0005737 KO:K13205
InterPro:IPR007946 PANTHER:PTHR12689 Pfam:PF05282 eggNOG:NOG331204
OrthoDB:EOG4J9R8C GO:GO:0005682 GO:GO:0000244 EMBL:D90455
EMBL:Z26879 EMBL:Z35835 EMBL:M36115 EMBL:BK006936 PIR:S18510
RefSeq:NP_009479.1 PDB:3SBS PDB:3SBT PDBsum:3SBS PDBsum:3SBT
ProteinModelPortal:P32357 SMR:P32357 DIP:DIP-6642N IntAct:P32357
MINT:MINT-663730 STRING:P32357 PaxDb:P32357 EnsemblFungi:YBL074C
GeneID:852205 KEGG:sce:YBL074C CYGD:YBL074c HOGENOM:HOG000033742
OMA:GSSLQWH NextBio:970703 Genevestigator:P32357 GermOnline:YBL074C
Uniprot:P32357
Length = 355
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 66/287 (22%), Positives = 119/287 (41%)
Query: 15 TLLLLDVPQYTLFGIDTQMFSVGPS--FKGIKMIPPG-VHFVFY----SSSSRDGKEFSP 67
T+ P GID F+V + F GIK IP G VH + + +SS R G F
Sbjct: 3 TVPFTSAPIEVTIGIDQYSFNVKENQPFHGIKDIPIGHVHVIHFQHADNSSMRYGYWFDC 62
Query: 68 IIG-FFIDAGPSEVIVRKWDQQXXXXXXXXXXXXARYTQAVCSLEFDKQLGPYTLSQYGE 126
+G F+I P + + + +++ V + D+ Y L+++ +
Sbjct: 63 RMGNFYIQYDPKDGLYKMMEERDGAKFENIVHNFKERQMMVSYPKIDEDDTWYNLTEFVQ 122
Query: 127 WKRLSSYITKSXXXXXXXXXXXXTVTAESGMMKNTPKSTMERALDEQLKTSKFTASVDSS 186
++ + K TV E+ ++K S++++A SK A +
Sbjct: 123 MDKIRKIVRKDENQFSYVDSSMTTVQ-ENELLK----SSLQKA------GSKMEAKNEDD 171
Query: 187 QKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKNYGGSEDTLLGELQFAFIA 246
YT I + G E+ LDK+ L +++ + + GELQFAF+
Sbjct: 172 PAHSLNYTVINFKSREAIRPGHEMEDF-LDKSYYLNTVMLQGIFKNSSNYFGELQFAFLN 230
Query: 247 FLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIKVIYYQLK 293
+ + + LQW +++ L+ + P H +L +++YYQ+K
Sbjct: 231 AMFFGNYGSSLQWHAMIELICSSATVPKHMLDKLD----EILYYQIK 273
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 388 364 0.00083 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 617 (66 KB)
Total size of DFA: 244 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.94u 0.19s 26.13t Elapsed: 00:00:01
Total cpu time: 25.94u 0.19s 26.13t Elapsed: 00:00:01
Start: Sat May 11 11:15:07 2013 End: Sat May 11 11:15:08 2013