BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016504
(388 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08DJ7|AAR2_BOVIN Protein AAR2 homolog OS=Bos taurus GN=AAR2 PE=2 SV=1
Length = 384
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 200/397 (50%), Gaps = 42/397 (10%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A L GAT+++L++P+ T FGID + VGP F+G+KMIPPG+HF+ YSS +
Sbjct: 6 MDPELARRLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDK 65
Query: 61 -DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCSL-EFDKQLGP 118
+ +E P +GFF++ + V +WD E V +S EA +L E D+ LGP
Sbjct: 66 ANPREVGPRMGFFLNLQQRGLKVLRWDAAREE-VDLSPAPEAEVEAMRANLQELDQFLGP 124
Query: 119 YTLSQYGEWKRLSSYITKSIIERIEPIGGEITVTAE-----------SGMMKNTPKSTME 167
Y + +W L+++I+++ +E+++P +I +E + +N P+ E
Sbjct: 125 YPYTTLKKWISLTNFISEATVEKLQPESRQICAFSEVLPVLSMRHTKDRVGQNLPRCGAE 184
Query: 168 -RALDEQLKTSKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLIT 226
++ E L ++ + ++ +P + G E+T ++D + LE++++
Sbjct: 185 CKSYQEGLARLPEMKPRAGTEIR---FSELPTQMFPAGATPAEITRHSMDLSYALETVLS 241
Query: 227 KNYGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIK 286
K + S +LGELQFAF+ FL+G EAF WK L++LL EA + S L+ I
Sbjct: 242 KQFPCSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLLCRSEEAMVKHHS-LYVNLIS 300
Query: 287 VIYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTW 346
++Y+QL E A +D +S D+FL + FF+ + + VD L
Sbjct: 301 ILYHQL----------GEIPADFFVD--IVSQDNFLTSTLQVFFSSARSVA-VDATLRQK 347
Query: 347 TRKLRELLENSLGWEFQQSSAVDGMYFEENDEYAPVV 383
+ + L W+F+ E ++ APVV
Sbjct: 348 AERFQAHLTKKFRWDFEA----------EPEDCAPVV 374
>sp|Q9Y312|AAR2_HUMAN Protein AAR2 homolog OS=Homo sapiens GN=AAR2 PE=1 SV=2
Length = 384
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 199/403 (49%), Gaps = 44/403 (10%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A L GAT+++L++P+ T FGID + VGP F+G+KMIPPG+HF+ YSS +
Sbjct: 6 MDPELAKRLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSSVDK 65
Query: 61 -DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCSL-EFDKQLGP 118
+ KE P +GFF+ + V +W E V +S E+ +L E D+ LGP
Sbjct: 66 ANPKEVGPRMGFFLSLHQRGLTVLRWSTLREE-VDLSPAPESEVEAMRANLQELDQFLGP 124
Query: 119 YTLSQYGEWKRLSSYITKSIIERIEPIGGEITVTAE-----------SGMMKNTPKSTME 167
Y + +W L+++I+++ +E+++P +I ++ + +N P+ +E
Sbjct: 125 YPYATLKKWISLTNFISEATVEKLQPENRQICAFSDVLPVLSMKHTKDRVGQNLPRCGIE 184
Query: 168 -RALDEQLKTSKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLIT 226
++ E L ++ + ++ +P + G E+T ++D + LE+++
Sbjct: 185 CKSYQEGLARLPEMKPRAGTEIR---FSELPTQMFPEGATPAEITKHSMDLSYALETVLN 241
Query: 227 KNYGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGC-SEAPLHTRSQLFTMFI 285
K + S +LGELQFAF+ FL+G EAF WK L++LL C SEA + L+ I
Sbjct: 242 KQFPSSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLL--CRSEAAMMKHHTLYINLI 299
Query: 286 KVIYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLT 345
++Y+QL E A +D +S D+FL + FF+ + VD L
Sbjct: 300 SILYHQL----------GEIPADFFVD--IVSQDNFLTSTLQVFFSSACSIA-VDATLRK 346
Query: 346 WTRKLRELLENSLGWEFQQSSAVDGMYFEENDEYAPVVEMLDE 388
K + L W+F E ++ APVV L E
Sbjct: 347 KAEKFQAHLTKKFRWDFAA----------EPEDCAPVVVELPE 379
>sp|Q4R7D0|AAR2_MACFA Protein AAR2 homolog OS=Macaca fascicularis GN=AAR2 PE=2 SV=1
Length = 384
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 198/400 (49%), Gaps = 38/400 (9%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A L GAT+++L++P+ T FGID + VGP F+G+KMIPPG+HF++YSS +
Sbjct: 6 MDPELAKRLFFEGATVVILNMPKGTEFGIDCNSWEVGPKFRGVKMIPPGIHFLYYSSVDK 65
Query: 61 -DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCSL-EFDKQLGP 118
+ KE P +GFF+ + V +W E V +S E+ +L E D+ LGP
Sbjct: 66 ANPKEVGPRMGFFLSLYQRGLTVLRWSTLREE-VDLSPAPESEVEAMRANLQELDQFLGP 124
Query: 119 YTLSQYGEWKRLSSYITKSIIERIEPIGGEITVTAE---SGMMKNTPK---STMERALDE 172
Y + +W L+++I+++ +E+++P +I ++ MK+T + R E
Sbjct: 125 YPYATLKKWISLTNFISEATVEKLQPENRQICAFSDVLPVLSMKHTKDRVGQNLPRCGTE 184
Query: 173 QLKTSKFTASVDSSQKKG---CYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKNY 229
+ A + + + ++ +P + G E+T ++D + L++++ K +
Sbjct: 185 CKSYQEGLARLPEMKPRAGTEIRFSELPTQMFPAGATPAEITKHSMDLSYALQTVLNKQF 244
Query: 230 GGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGC-SEAPLHTRSQLFTMFIKVI 288
S +LGELQFAF+ FL+G EAF WK L++LL C SEA + L+ I ++
Sbjct: 245 PSSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLL--CRSEAAMVKHHTLYINLISIL 302
Query: 289 YYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTWTR 348
Y+QL E A +D +S D+FL + FF+ + VD L
Sbjct: 303 YHQLG----------EIPADFFVD--IVSQDNFLTSTLQVFFSSACSIA-VDATLRKKAE 349
Query: 349 KLRELLENSLGWEFQQSSAVDGMYFEENDEYAPVVEMLDE 388
K + L W+F E ++ APVV L E
Sbjct: 350 KFQAHLTKKFRWDFAA----------EPEDCAPVVVELPE 379
>sp|Q5R5N9|AAR2_PONAB Protein AAR2 homolog OS=Pongo abelii GN=AAR2 PE=2 SV=1
Length = 384
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 197/403 (48%), Gaps = 44/403 (10%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A L GAT+++L++P+ T FGID + VGP F+G+K IPPG+HF+ YSS +
Sbjct: 6 MDPELAKRLFFEGATVVILNMPRGTEFGIDYNSWEVGPKFRGVKTIPPGIHFLHYSSVDK 65
Query: 61 -DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCSL-EFDKQLGP 118
+ KE P +GFF+ + V +W E V +S E+ +L E D+ LGP
Sbjct: 66 ANPKEVGPRMGFFLSLHQRGLTVLRWSTLREE-VDLSPAPESEVEAMRANLQELDQFLGP 124
Query: 119 YTLSQYGEWKRLSSYITKSIIERIEPIGGEITVTAE-----------SGMMKNTPKSTME 167
Y + +W L+++I+++ +E+++P +I ++ M +N P+ E
Sbjct: 125 YPYATLKKWISLTNFISEATVEKLQPENRQICAFSDVLPVLSMKHTKDRMGQNLPRCGTE 184
Query: 168 -RALDEQLKTSKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLIT 226
++ E L ++ + ++ +P + G E+T ++D + LE+++
Sbjct: 185 CKSYQEGLARLPEMKPRAGTEIR---FSELPTQMFPEGATPAEITKHSMDLSYALETVLN 241
Query: 227 KNYGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGC-SEAPLHTRSQLFTMFI 285
K + S +LGELQFAF+ FL+G EAF WK L++LL C SEA + L+ I
Sbjct: 242 KQFPSSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLL--CRSEAAMMKHHTLYINLI 299
Query: 286 KVIYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLT 345
++Y+QL E A +D +S D+FL + FF+ + VD L
Sbjct: 300 SILYHQLG----------EIPADFFVD--IVSQDNFLTSTLQVFFSSACSIA-VDATLRK 346
Query: 346 WTRKLRELLENSLGWEFQQSSAVDGMYFEENDEYAPVVEMLDE 388
K + L W+F E ++ APVV L E
Sbjct: 347 KAEKFQAHLTKKFRWDFAA----------EPEDCAPVVVELPE 379
>sp|Q09305|AAR2_CAEEL Protein AAR2 homolog OS=Caenorhabditis elegans GN=F10B5.2 PE=1 SV=1
Length = 357
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 173/378 (45%), Gaps = 42/378 (11%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
+ PE + ++GA LL L PQ + FGID + + G F G+KMIPPGVHFV+ S S
Sbjct: 5 LPPEIVDYMYRNGAFLLFLGFPQASEFGIDYKSWKTGEKFMGLKMIPPGVHFVYCSIKS- 63
Query: 61 DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCS----LEFDKQL 116
+P IGFF + E++V+KW+ + E E+EE Q D L
Sbjct: 64 -----APRIGFFHNFKAGEILVKKWNTESETF----EDEEVPTDQISEKKRQLKNMDSSL 114
Query: 117 GPYTLSQYGEWKRLSSYITKSIIERIEPIGGEITVTAESGMMKNTPKSTMERALDEQLKT 176
PY Y W L+ +IT +ERI PI G IT AE + + ME A E K
Sbjct: 115 APYPYENYRSWYGLTDFITADTVERIHPILGRITSQAE---LVSLETEFMENAEKEH-KD 170
Query: 177 SKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKNY------- 229
S F VD +T + + +G E+ ++ + ++ + Y
Sbjct: 171 SHFRNRVDRENPVRTRFTDQHGLPIMKIREGYEIRFQDIPPLTVSQNRVGIEYSDRLYRL 230
Query: 230 ----GGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFI 285
GG LL E+Q AF+ FL GQ E F QWK ++ L+ C L + +LF FI
Sbjct: 231 LRALGGDWKQLLAEMQIAFVCFLQGQVFEGFEQWKRIIHLM-SCCPNSLGSEKELFMSFI 289
Query: 286 KVIYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLT 345
+V+++QLK E +D +S D+FL FA ++D++ DL
Sbjct: 290 RVLFFQLK----------ECPTDFFVD--IVSRDNFLTTTLSMLFANVRDSAHAGDDLKK 337
Query: 346 WTRKLRELLENSLGWEFQ 363
T + ++ L N W+F
Sbjct: 338 KTAQFKQYLTNQFKWDFN 355
>sp|Q9D2V5|AAR2_MOUSE Protein AAR2 homolog OS=Mus musculus GN=Aar2 PE=2 SV=3
Length = 384
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 201/405 (49%), Gaps = 48/405 (11%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A +L GAT+++L++P+ T FGID + VGP F+G+KMIPPG+HF++YSS +
Sbjct: 6 MDPELAKQLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLYYSSVDK 65
Query: 61 -DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCSL-EFDKQLGP 118
+ +E P +GFF+ + V +W+ +E V +S EA +L + D+ LGP
Sbjct: 66 ANPREVGPRMGFFLSLKQRGLTVLRWNAVQEE-VDLSPAPEAEVEAMRANLPDLDQFLGP 124
Query: 119 YTLSQYGEWKRLSSYITKSIIERIEPIGGEITVTAESGMMKNTPKSTMERALDEQLKTSK 178
Y + +W L+++I+++ +E+++P +I ++ P M+ D +
Sbjct: 125 YPYATLKKWISLTNFISEATMEKLQPESRQICAFSDV-----LPVLFMKHTKDRVGQNLP 179
Query: 179 FTASVDSSQKKG--------------CYYTSIPRVVKCRGMQGEELTSLNLDKTELLESL 224
+ S ++G ++ +P + G E+T ++D + LE++
Sbjct: 180 LCGTECRSYQEGLARLPEMRPRAGTEIRFSELPTQMFPAGATPAEITRHSMDLSYALETV 239
Query: 225 ITKNYGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGC-SEAPLHTRSQLFTM 283
++K + G+ +LGELQFAF+ FL+G EAF WK L++LL C SE+ + L+
Sbjct: 240 LSKQFPGNPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLL--CRSESAMGKYHALYIS 297
Query: 284 FIKVIYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDL 343
I ++Y+QL E A +D +S D+FL + FF+ + V+ L
Sbjct: 298 LISILYHQLG----------EIPADFFVD--IVSQDNFLTSTLQVFFSSACSIA-VEATL 344
Query: 344 LTWTRKLRELLENSLGWEFQQSSAVDGMYFEENDEYAPVVEMLDE 388
K + L W+F E ++ APVV L E
Sbjct: 345 RKKAEKFQAHLTKKFRWDFTS----------EPEDCAPVVVELPE 379
>sp|O77682|AAR2_RABIT Protein AAR2 homolog OS=Oryctolagus cuniculus GN=AAR2 PE=2 SV=2
Length = 337
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 181/401 (45%), Gaps = 87/401 (21%)
Query: 1 MDPEAALELVKHGATLLLLDVPQYTLFGIDTQMFSVGPSFKGIKMIPPGVHFVFYSSSSR 60
MDPE A L GAT+++L++P+ T FGID + VGP F+G+KMIPPG+HF+ YS+
Sbjct: 6 MDPELAKCLFFEGATVVILNMPKGTEFGIDYNSWEVGPKFRGVKMIPPGIHFLHYSA--- 62
Query: 61 DGKEFSPIIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEEARYTQAVCSLEFDKQLGPYT 120
V K + QE D+ LGPY
Sbjct: 63 ---------------------VDKANLQE----------------------LDQFLGPYP 79
Query: 121 LSQYGEWKRLSSYITKSIIERIEPIGGEITVTAE-----------SGMMKNTPKSTME-R 168
+ +W L+S+I+++ +ER++P +I ++ + +N P+ E +
Sbjct: 80 YATLKKWISLTSFISEATVERLQPESRQICAFSDVLPVLAMKHTKDRVGQNLPQCGTECK 139
Query: 169 ALDEQLKTSKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKN 228
+ E L ++ + ++ +P + G E+T ++D + LE ++ +
Sbjct: 140 SYQEGLARLPEMKPRAGTEIR---FSELPTQMFPAGATPAEITRHSMDLSYALEMVLGRQ 196
Query: 229 YGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGC-SEAPLHTRSQLFTMFIKV 287
+ GS +LGELQFAF+ FL+G EAF WK L++LL C SEA + L+ I +
Sbjct: 197 FPGSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLL--CRSEAAMVKHHALYVNLISI 254
Query: 288 IYYQLKYGLQKDRNGTETGASALLDDSWLSADSFLHHLCKDFFALIQDASVVDGDLLTWT 347
+Y+QL E A +D +S D+FL + FF+ ++ VD L
Sbjct: 255 LYHQLG----------EIPADFFVD--IVSQDNFLTSTLQVFFS-SACSTAVDATLRKKA 301
Query: 348 RKLRELLENSLGWEFQQSSAVDGMYFEENDEYAPVVEMLDE 388
K + L W+F E ++ APVV L E
Sbjct: 302 EKFQAHLTKKFRWDFAA----------EPEDCAPVVVELPE 332
>sp|P32357|AAR2_YEAST A1 cistron-splicing factor AAR2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AAR2 PE=1 SV=1
Length = 355
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 128/291 (43%), Gaps = 32/291 (10%)
Query: 15 TLLLLDVPQYTLFGIDTQMFSVGPS--FKGIKMIPPG-VHFVFY----SSSSRDGKEFSP 67
T+ P GID F+V + F GIK IP G VH + + +SS R G F
Sbjct: 3 TVPFTSAPIEVTIGIDQYSFNVKENQPFHGIKDIPIGHVHVIHFQHADNSSMRYGYWFDC 62
Query: 68 IIG-FFIDAGPSEVIVRKWDQQE----ERLVKVSEEEEARYTQAVCSLEFDKQLGPYTLS 122
+G F+I P + + + ++++ E +V +E + V + D+ Y L+
Sbjct: 63 RMGNFYIQYDPKDGLYKMMEERDGAKFENIVHNFKERQM----MVSYPKIDEDDTWYNLT 118
Query: 123 QYGEWKRLSSYITKSIIERIEPIGGEITVTAESGMMKNTPKSTMERALDEQLKTSKFTAS 182
++ + ++ + K + + +T E+ ++K S++++A SK A
Sbjct: 119 EFVQMDKIRKIVRKDE-NQFSYVDSSMTTVQENELLK----SSLQKA------GSKMEAK 167
Query: 183 VDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKNYGGSEDTLLGELQF 242
+ YT I + G E+ LDK+ L +++ + + GELQF
Sbjct: 168 NEDDPAHSLNYTVINFKSREAIRPGHEMEDF-LDKSYYLNTVMLQGIFKNSSNYFGELQF 226
Query: 243 AFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIKVIYYQLK 293
AF+ + + + LQW +++ L+ + P H +L +++YYQ+K
Sbjct: 227 AFLNAMFFGNYGSSLQWHAMIELICSSATVPKHMLDKL----DEILYYQIK 273
>sp|Q6LA53|AAR2_SCHPO A1 cistron-splicing factor aar2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=aar2 PE=1 SV=1
Length = 346
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 76/186 (40%), Gaps = 24/186 (12%)
Query: 112 FDKQLGPYTLSQYGEWKRLSSYITKSIIERIEPIGGEI-----TVTAESGMMKNTPKSTM 166
+D+ P+ ++ +W L+ +IT ++RI GE + + ++ P+ +
Sbjct: 83 YDENFYPFESTK--DWDLLTKFITVQDLQRIFATEGEFFYLDTSTYVNADLVSQDPEFSK 140
Query: 167 ERALDEQLKTSKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLIT 226
D+ L ++F R G E + +DK+ L + L+
Sbjct: 141 PSRDDKLLNFAEFNL----------------RRSWSPSATGPERSKQAIDKSFLFQRLVQ 184
Query: 227 KNYGGSEDTLLGELQFAFIAFLMGQSLEAFLQWKSLVSLLFGCSEAPLHTRSQLFTMFIK 286
+ + + L EL +F+++ + A WK+++SLL E T + + F++
Sbjct: 185 SVWNDNPISALAELSISFLSYSILSHYGALEHWKNMLSLLLQSYELA-ETEPEFYASFLE 243
Query: 287 VIYYQL 292
+ QL
Sbjct: 244 LFKLQL 249
>sp|Q5U680|SAMC_MOUSE S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus
GN=Slc25a26 PE=2 SV=2
Length = 274
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%)
Query: 163 KSTMERALDEQLKTSKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLE 222
KS + K K + + + C VVK R +L + T L E
Sbjct: 75 KSLLHTDSTSHFKPVKHMLAASTGEVVACLIRVPSEVVKQRAQVSASSKTLQIFLTILSE 134
Query: 223 SLITKNYGGSEDTLLGELQFAFIAFLMGQSLEAFLQWK 260
I Y G + T+L E+ F+ + F + +SL+A W+
Sbjct: 135 EGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWAWR 172
>sp|Q70HW3|SAMC_HUMAN S-adenosylmethionine mitochondrial carrier protein OS=Homo sapiens
GN=SLC25A26 PE=2 SV=1
Length = 274
Score = 31.6 bits (70), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 35/87 (40%)
Query: 174 LKTSKFTASVDSSQKKGCYYTSIPRVVKCRGMQGEELTSLNLDKTELLESLITKNYGGSE 233
L K + + + C VVK R + + L E I Y G +
Sbjct: 86 LTPMKHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFSNILYEEGIQGLYRGYK 145
Query: 234 DTLLGELQFAFIAFLMGQSLEAFLQWK 260
T+L E+ F+ + F + +SL+A W+
Sbjct: 146 STVLREIPFSLVQFPLWESLKALWSWR 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,230,298
Number of Sequences: 539616
Number of extensions: 5632750
Number of successful extensions: 14197
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 14163
Number of HSP's gapped (non-prelim): 20
length of query: 388
length of database: 191,569,459
effective HSP length: 119
effective length of query: 269
effective length of database: 127,355,155
effective search space: 34258536695
effective search space used: 34258536695
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)