BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016505
(388 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 233/307 (75%), Gaps = 11/307 (3%)
Query: 64 SFEVLPSKNPRLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIY 123
S+E PS++ R RK+ +++ DE EE++ S EQA E E + + I
Sbjct: 285 SWEKSPSQSSRRRKKSEDTVINVDE-------EEAQPST---VAEQAAELPEGLQE-DIC 333
Query: 124 YPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFY 183
YP+R DP V++C D+ LAP YLTSP+MNFY+R+LQ Q S +N+ DCHFFNTYFY
Sbjct: 334 YPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFNTYFY 393
Query: 184 SKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDES 243
KL +AV++KG DKD+FF++FRRWWKG+++F+K+Y+ IPIHED+HWSLVI+CIPDK+DES
Sbjct: 394 KKLSDAVTYKGNDKDAFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDES 453
Query: 244 GPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRI 303
G ILHLDSL LH SI N++ FLK+EWNYL Q+ DLPI+E++W++LPRRI + +
Sbjct: 454 GLTILHLDSLGLHSRKSIVENVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAV 513
Query: 304 IPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLL 363
+ VPQQKND+DCG FVLFF++RF+EEAP+RLK+KDL MF K+WFRP+EAS LRIKIRN L
Sbjct: 514 VQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFDKKWFRPDEASALRIKIRNTL 573
Query: 364 KKQFQIS 370
+ F++S
Sbjct: 574 IELFRVS 580
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 325 bits (833), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 214/308 (69%), Gaps = 25/308 (8%)
Query: 68 LPSKNPRLRKEQNLVLLDEDE--SP--VEDASEESEGSLHIETTEQADEFAECMIDAKIY 123
L S + R + + ++ LDEDE SP VE+A E EG + IY
Sbjct: 276 LQSSSCRKKSDDKVINLDEDEPLSPMVVEEACELPEG-----------------LPEDIY 318
Query: 124 YPSRVDPES---VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNT 180
YPS + V++ D+ L+P YLTSP++NFYIRY+Q ++ +CHFFNT
Sbjct: 319 YPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCHFFNT 378
Query: 181 YFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKE 240
+FY KL EAVS+KG D+D++F+KFRRWWKG ++F KSY+ IPIHED+HWSLVIICIPDKE
Sbjct: 379 FFYKKLTEAVSYKGNDRDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSLVIICIPDKE 438
Query: 241 DESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRID 300
DESG I+HLDSL LH IF+N++ FL+EEWNYL Q+ +P DLPI+ ++W+ LP I+
Sbjct: 439 DESGLTIIHLDSLGLHPRNLIFNNVKRFLREEWNYLNQD-APLDLPISAKVWRDLPNMIN 497
Query: 301 DRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIR 360
+ + VPQQKND+DCGLF+LFF+ RF+EEAP+RL +DL M K+WF+PEEAS LRIKI
Sbjct: 498 EAEVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKMIHKKWFKPEEASALRIKIW 557
Query: 361 NLLKKQFQ 368
N+L F+
Sbjct: 558 NILVDLFR 565
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 30/275 (10%)
Query: 122 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 181
+ YP + DP++V IC D+ L P ++ I++FYI YL+ Q + +
Sbjct: 384 VVYP-KGDPDAVSICKRDVELLQPETFVNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFF 442
Query: 182 FYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDK-- 239
+ D + F++ R+W + V++F K Y+ +P++ ++HWSL++IC P +
Sbjct: 443 RKLADLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVA 502
Query: 240 --------EDESGPIILHLDSLK-LHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAER 290
+ + P ILH+DS+K H L ++++L EEW +E S I+ R
Sbjct: 503 NRTDLDLDDSKKVPCILHMDSIKGSHAGLKNL--VQTYLCEEWKERHKETSDD---ISSR 557
Query: 291 IWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGK------ 344
R + + +PQQ+N +DCGLF+L ++E F+ EAP L ++
Sbjct: 558 FMN--LRFVS---LELPQQENSFDCGLFLLHYLELFLAEAP--LNFSPFKIYNASNFLYL 610
Query: 345 RWFRPEEASGLRIKIRNLLKKQFQISSAECCNSKS 379
WF P EAS R I+ L+ + + S E N ++
Sbjct: 611 NWFPPAEASLKRTLIQKLIFELLENRSREVSNEQN 645
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 143/280 (51%), Gaps = 32/280 (11%)
Query: 102 LHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYL 161
L T AD F + + YP + +P++V + DI L P ++ I++FYI+YL
Sbjct: 281 LGTSLTNLADSFED------LVYP-QGEPDAVVVRKQDIELLKPRRFINDTIIDFYIKYL 333
Query: 162 QLQASPTNRA-IRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVL 220
+ + SP R + F + L + G ++++ + ++W K V++F+K Y+
Sbjct: 334 KNRISPKERGRFHFFNCFFFRKLANLDKGTPSTCGGREAYQ-RVQKWTKNVDLFEKDYIF 392
Query: 221 IPIHEDVHWSLVIICIPD-------KEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEW 273
IPI+ HWSLVIIC P + + P ILHLDS+K + + S+L+EEW
Sbjct: 393 IPINCSFHWSLVIICHPGELVPSHVENPQRVPCILHLDSIKGSHKGGLINIFPSYLREEW 452
Query: 274 NYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPER 333
+ E + +D A + Q + + +PQQ+N +DCGLF+L +++ F+ +AP +
Sbjct: 453 K-ARHENTTNDSSRAPNM-QSIS-------LELPQQENSFDCGLFLLHYLDLFVAQAPAK 503
Query: 334 ----LKKKDLAMFGKRWFRPEEASGLRIKIRNLLKKQFQI 369
L + + WF +EAS +K RN+L+ + +
Sbjct: 504 FNPSLISRSANFLTRNWFPAKEAS---LKRRNILELLYNL 540
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 52/271 (19%)
Query: 132 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAI-RDCHFFNTYFYSKLK--- 187
S+ I TD+ L +L I++FY+RYL + N ++ D H FNT+FY++L
Sbjct: 346 SIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLTSKD 405
Query: 188 ---EAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIIC-------IP 237
+ + H+G R+W + V++F K Y+++PI+E HW L IIC +
Sbjct: 406 KDGKRLGHRG---------VRKWTQKVDLFHKKYIIVPINETFHWYLAIICNIDRLMPVD 456
Query: 238 DKEDESGPIIL------------HLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDL 285
K +E I++ + ++ IF ++ + K NYL++ +
Sbjct: 457 TKLEEQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREYLLEEAF 516
Query: 286 PIAERIWQHLPRRIDDRII--PVPQQKNDYDCGLFVLFFMERFMEEAPER---------L 334
ER HL + D R VPQQ N DCG++ L F+E F+ E PE+ L
Sbjct: 517 ---ERKNVHL-KSTDIRGFHAKVPQQSNFSDCGIYALHFVELFL-ETPEQVIANTLDKSL 571
Query: 335 KKKDLAMFGKRWFRPEEASGLRIKIRNLLKK 365
++ D F ++W ++ + +R ++ L+++
Sbjct: 572 RRTDAKNFDQQW-NLQKINTMRCDLKGLIRR 601
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 139 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 198
D+ L +L ++N Y + + A P HFFN++F+ +L KG
Sbjct: 573 DLATLDGQNWLNDQVINMYGELI-MDAVPDK-----VHFFNSFFHRQLVT----KG---- 618
Query: 199 SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCS 258
+ +RW K V++F+KS +LIPIH +VHWSL+ + + ++ II DS +H
Sbjct: 619 --YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNR------IISFYDSQGIHFK 670
Query: 259 LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLF 318
+ NIR YL E + P + WQ + +PQQKND DCG+F
Sbjct: 671 FCV-ENIR-------KYLLTEAREKNRPEFLQGWQTAVTKC------IPQQKNDSDCGVF 716
Query: 319 VLFFMERFMEEAPERLKKKDLAMFGKRWFR 348
VL + + E P + ++D+ KR ++
Sbjct: 717 VLQYCKCLALEQPFQFSQEDMPRVRKRIYK 746
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 139 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 198
D+ L +L ++N Y + + A P HFFN++F+ +L KG
Sbjct: 573 DLATLDGQNWLNDQVINMYGELI-MDAVPDK-----VHFFNSFFHRQLVT----KG---- 618
Query: 199 SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCS 258
+ +RW K V++F+KS +LIPIH +VHWSL+ + + ++ II DS +H
Sbjct: 619 --YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNR------IISFYDSQGIHFK 670
Query: 259 LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLF 318
+ NIR YL E + P + WQ + +PQQKND DCG+F
Sbjct: 671 FCV-ENIR-------KYLLTEAREKNRPEFLQGWQTAVTKC------IPQQKNDSDCGVF 716
Query: 319 VLFFMERFMEEAPERLKKKDLAMFGKRWFR 348
VL + + E P + ++D+ KR ++
Sbjct: 717 VLQYCKCLALEQPFQFSQEDMPRVRKRIYK 746
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 36/210 (17%)
Query: 139 DINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKD 198
D+ L +L ++N Y + + A P HFFN++F+ +L KG
Sbjct: 567 DLATLDGQNWLNDQVINMYGELI-MDAVPDK-----VHFFNSFFHRQLVT----KG---- 612
Query: 199 SFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCS 258
+ +RW K V++F+KS +LIPIH +VHWSL+ + + S II DS +H
Sbjct: 613 --YNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTL------SSRIISFYDSQGIHFK 664
Query: 259 LSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLF 318
+ NIR YL E + P + WQ + +PQQKND DCG+F
Sbjct: 665 FCV-ENIR-------KYLLTEAREKNRPEFLQGWQTAVTKC------IPQQKNDSDCGVF 710
Query: 319 VLFFMERFMEEAPERLKKKDLAMFGKRWFR 348
VL + + E P + ++D+ KR ++
Sbjct: 711 VLQYCKCLALEQPFQFSQEDMPRVRKRIYK 740
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 41/219 (18%)
Query: 133 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 188
+ I DI L +L ++NFY+ L + Q P H F+T+FY KLK
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 448
Query: 189 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIIL 248
GG + +RW KGVN+F++ +L+PIH VHWSLV+I + K +
Sbjct: 449 -----GG-----YQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDLRKK------CLK 492
Query: 249 HLDSL--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 306
+LDS+ K H I + +L++E + SDL + E W H + + +
Sbjct: 493 YLDSMGQKGH---RICEILLQYLQDESKTKRN----SDLNLLE--WTHHSMKPHE----I 539
Query: 307 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
PQQ N DCG+F + + + P + + +F K+
Sbjct: 540 PQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 578
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 133 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 192
+ I DI L +L ++NFY+ L ++ + H F+T+FY KLK
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSK--KQGYPALHAFSTFFYPKLKS---- 447
Query: 193 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 252
GG + +RW KGVN+F++ VL+PIH VHWSLV++ + K + +LDS
Sbjct: 448 -GG-----YQAVKRWTKGVNLFEQELVLVPIHRKVHWSLVVMDLRKK------CLKYLDS 495
Query: 253 L--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQK 310
+ K H I + +L++E + +DL + E W H + + +PQQ
Sbjct: 496 MGQKGH---RICEILLQYLQDESKTKRN----TDLNLLE--WTHYSMKPHE----IPQQL 542
Query: 311 NDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
N DCG+F + + + P + + +F K+
Sbjct: 543 NGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 577
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 133 VEICYTDINHLAPAAYLTSPIMNFYIRYL----QLQASPTNRAIRDCHFFNTYFYSKLKE 188
+ I DI L +L ++NFY+ L + Q P H F+T+FY KLK
Sbjct: 395 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPA------LHVFSTFFYPKLKS 448
Query: 189 AVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIIL 248
GG + +RW KGVN+F++ +L+PIH VHWSLV+I + K +
Sbjct: 449 -----GG-----YQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVIDLRKK------CLK 492
Query: 249 HLDSL--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 306
+LDS+ K H I + +L++E + K+ + DL + E W H + + +
Sbjct: 493 YLDSMGQKGH---RICEILLQYLQDE-SKTKRNI---DLNLLE--WTHYSMKPHE----I 539
Query: 307 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
PQQ N DCG+F + + + P + + +F K+
Sbjct: 540 PQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 578
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 30/199 (15%)
Query: 132 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 191
+++I + L P+A+L ++N Y+ L+ + + + CH+FNT+FY KL VS
Sbjct: 287 NIDITGEVLQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKL---VS 343
Query: 192 HKGGDKDSFFIKFRRWWK----GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 247
G + F RRW G + + +PIH VHW+L + I ++E + +
Sbjct: 344 DSGYN----FKAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTLAV--INNRESK----L 393
Query: 248 LHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVP 307
L+LDSL I + + ++ +E N S I W + + +P
Sbjct: 394 LYLDSLN-GVDPMILNALAKYMGDEAN------EKSGKKIDANSWDM------EFVEDLP 440
Query: 308 QQKNDYDCGLFVLFFMERF 326
QQKN YDCG+F+L +++ F
Sbjct: 441 QQKNGYDCGMFMLKYIDFF 459
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 120/309 (38%), Gaps = 83/309 (26%)
Query: 122 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 181
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 746 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSHIFSSF 804
Query: 182 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIIC 235
FY L ++ D + + RR W + +NIF K Y+ +P++E HW L +IC
Sbjct: 805 FYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVIC 864
Query: 236 IP------------------------------------------DKEDESGP-------- 245
P ED P
Sbjct: 865 FPWLEEVVYEDFPQTIPQYSQAEESHHDSRTIDNDLHTSSALSSGTEDSQSPEMNVTVPK 924
Query: 246 ------IILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQ---EVSPSDLPIAERIWQHLP 296
IL LDSLK + N+R +L+ EW ++ E S +++
Sbjct: 925 KMCKRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMV---------- 974
Query: 297 RRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLR 356
D VP+Q N DCG+++L ++E F ++ + +L + ++WF R
Sbjct: 975 ----DLCPKVPKQDNSSDCGVYLLQYVESFFKDP---IVNFELPIHLEKWFPRHVIKTKR 1027
Query: 357 IKIRNLLKK 365
IR L+ K
Sbjct: 1028 EDIRELILK 1036
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 133 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 192
+ I DI L +L ++NFY+ L ++ + H +T+FY KLK
Sbjct: 394 LRITRGDIQTLKNYHWLNDEVINFYMNLLVERSK--KQGYPALHALSTFFYPKLKS---- 447
Query: 193 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 252
GG + +RW KGVN+F + VL+PIH VHWSLV++ + K + +LDS
Sbjct: 448 -GG-----YQAVKRWTKGVNLFDQELVLVPIHRKVHWSLVVMDLRKK------CLKYLDS 495
Query: 253 L--KLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQK 310
+ K H I + +L++E + +DL + E W H + + +PQQ
Sbjct: 496 MGQKGH---RICEILLQYLQDESKTKRN----TDLNLLE--WTHYSMKPHE----IPQQL 542
Query: 311 NDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
N DCG+F + + + P + + +F K+
Sbjct: 543 NGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 577
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 132 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 191
+++I + L P +L + N Y+ L+ + + + CHFFNT+FY KL VS
Sbjct: 138 NIDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKL---VS 194
Query: 192 HKGGDKDSFFIKFRRWWK----GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 247
G + + RW G ++ + +PIH D+HW+L +I +++
Sbjct: 195 GSGYN----YKAVSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVINNRERK------F 244
Query: 248 LHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVP 307
++LDSL +I + + +L +E +KQ+ S ++ ++ +++ R P
Sbjct: 245 VYLDSLFTGVGHTILNAMAKYLVDE---VKQK-SQKNIDVSSWGMEYVEER--------P 292
Query: 308 QQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
QQ+N YDCG+F+L +++ + + +KD+ F R
Sbjct: 293 QQQNGYDCGMFMLKYIDFYSRGLSLQFSQKDMPYFRLR 330
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 128/301 (42%), Gaps = 56/301 (18%)
Query: 67 VLPSKNPRLRKEQNLVLLD---------EDESPVEDASEESEGSLHIETTEQADEFAECM 117
L +N RL+++++ VL E E PV A E + S + T+ DEF E
Sbjct: 363 ALQLQNQRLQEQEHAVLDSVELHLRVPLEKEIPVTAAQETRKKSHQL--TDSEDEFPEIT 420
Query: 118 --IDAKIYYPSR------VDPESVEICYT--DINHLAPAAYLTSPIMNFYIRYLQLQASP 167
++ +I R V E+ + T DI L +L I+NFY+ L ++
Sbjct: 421 EEMEKEIKNVFRNGNQDEVLSEAFRLTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK- 479
Query: 168 TNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDV 227
+ H FNT+F++KLK A + +RW K V++F +L+PIH V
Sbjct: 480 -EKGFPSVHAFNTFFFTKLKTAG----------YQAVKRWTKKVDVFSVDILLVPIHLGV 528
Query: 228 HWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSN--IRSFLKEEWNYLKQE-VSPSD 284
HW L ++ K S+ + S+ +N R L+ YLKQE V
Sbjct: 529 HWCLAVVDFRRK------------SITYYDSMGGINNEACRILLQ----YLKQESVDKKR 572
Query: 285 LPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGK 344
WQ ++ + +PQQ N DCG+F + + ++ P ++ + F K
Sbjct: 573 KEFDTNGWQLFSKKSQE----IPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRK 628
Query: 345 R 345
R
Sbjct: 629 R 629
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 32/219 (14%)
Query: 128 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLK 187
VD S++IC D+ L+ +L I+NFY++ + +++ ++ + + FNT+FYS
Sbjct: 496 VDAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGDSKYPK-IYAFNTFFYSN-- 552
Query: 188 EAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPII 247
+ KG + +RW + V+IF VL+P+H +HW + +I + +K+ I
Sbjct: 553 --IVSKG------YASVKRWTRKVDIFAFDIVLVPVHLGMHWCMAVIDMGEKK------I 598
Query: 248 LHLDSLKLHCSLSIFSNIRSFLK-EEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 306
DSL + ++ +R +L+ E + K ++ S I + + +
Sbjct: 599 EFYDSL-YDGNTAVLPALRGYLEAESLDKKKTAMNFSGWTIQQ-------------MTDI 644
Query: 307 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
P+Q+N DCG+F F E R +K++ + KR
Sbjct: 645 PRQQNGSDCGVFSCQFGEWASRRTTPRFTQKNMPYYRKR 683
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 32/243 (13%)
Query: 86 EDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAP 145
+DE PVE E+ L E E A A D+ I + +++I + L P
Sbjct: 256 QDEEPVEVVQREAFVPLSREE-ETAVRRAFSANDSNILVTHK--NSNIDITGKILRCLKP 312
Query: 146 AAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKGGDKDSFFIKFR 205
+L ++N Y+ L+ + + + CHFFNT+F++KL + + + R
Sbjct: 313 GKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVNSATGYN------YGAVR 366
Query: 206 RWWK----GVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSI 261
RW G ++ + IPIH ++HW+L +I I D++ +LDS K +
Sbjct: 367 RWTSMKRLGYHLKDCDKIFIPIHMNIHWTLAVINIKDQK------FQYLDSFKGREPKIL 420
Query: 262 FSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLF 321
+ R F+ E ++ S DL ++ W+ + + +P Q+N +DCG+F++
Sbjct: 421 DALARYFVDE-----VRDKSEVDLDVSR--WRQ------EFVQDLPMQRNGFDCGMFMVK 467
Query: 322 FME 324
+++
Sbjct: 468 YID 470
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 133 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 192
+ I DI L +L I+NFY+ L ++ + + H FNT+F++KLK A
Sbjct: 450 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK--EKGLPSVHAFNTFFFTKLKTAG-- 505
Query: 193 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 252
+ +RW K V++F +L+PIH VHW L ++ K I + DS
Sbjct: 506 --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 551
Query: 253 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 311
+ I + L + YLKQE + WQ ++ + +PQQ N
Sbjct: 552 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 599
Query: 312 DYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
DCG+F + + ++ P ++ + F KR
Sbjct: 600 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 633
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 133 VEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSH 192
+ I DI L +L I+NFY+ L ++ + + H FNT+F++KLK A
Sbjct: 451 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSK--EKGLPSVHAFNTFFFTKLKTAG-- 506
Query: 193 KGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDS 252
+ +RW K V++F +L+PIH VHW L ++ K I + DS
Sbjct: 507 --------YQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKN------ITYYDS 552
Query: 253 LKLHCSLSIFSNIRSFLKEEWNYLKQE-VSPSDLPIAERIWQHLPRRIDDRIIPVPQQKN 311
+ I + L + YLKQE + WQ ++ + +PQQ N
Sbjct: 553 MG-----GINNEACRILLQ---YLKQESIDKKRKEFDTNGWQLFSKKSQE----IPQQMN 600
Query: 312 DYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKR 345
DCG+F + + ++ P ++ + F KR
Sbjct: 601 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 634
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 117 MIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCH 176
++ I YP + + D+ L +L I++FY++YL L+ + ++ + H
Sbjct: 744 LVQKLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKA-SDELVERSH 802
Query: 177 FFNTYFYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWS 230
F+++FY L ++ D + + RR W + +NIF K Y+ +P++E HW
Sbjct: 803 IFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWY 862
Query: 231 LVIICIP 237
L +IC P
Sbjct: 863 LAVICFP 869
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 245 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNY-LKQEVSPSDLPIAERIWQHLPRRIDDRI 303
P IL LDSLK + N+R +L+ EW LK Q + D
Sbjct: 933 PCILILDSLKAASVQNTVQNLREYLEVEWEVKLKTH------------RQFSKTNMVDLC 980
Query: 304 IPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLL 363
VP+Q N DCG+++L ++E F ++ + +L + ++WF R IR L+
Sbjct: 981 PKVPKQDNSSDCGVYLLQYVESFFKDP---IVNFELPIHLEKWFPRHVIKTKREDIRELI 1037
Query: 364 KK 365
K
Sbjct: 1038 LK 1039
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 122 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 181
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKA-SDELVERSHIFSSF 794
Query: 182 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIIC 235
FY L ++ D + RR W + +NIF K Y+ +P++E HW L +IC
Sbjct: 795 FYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVIC 854
Query: 236 IP 237
P
Sbjct: 855 FP 856
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Query: 245 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQ---EVSPSDLPIAERIWQHLPRRIDD 301
P IL LDSLK + N+R +L+ EW ++ E S +++ D
Sbjct: 920 PCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMV--------------D 965
Query: 302 RIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRN 361
VP+Q N DCG+++L ++E F ++ + +L + ++WF R IR
Sbjct: 966 LCPKVPKQDNSSDCGVYLLQYVESFFQDP---IVNFELPIHLEKWFPRHVIKTKREDIRE 1022
Query: 362 LLKK 365
L+ K
Sbjct: 1023 LILK 1026
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 122 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 181
I YP + + D+ L +L I++FY++YL L+ + ++ + H F+++
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKA-SDELVERSHIFSSF 794
Query: 182 FYSKLKEAVSHKGGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIIC 235
FY L ++ D + RR W + +NIF K Y+ +P++E HW L +IC
Sbjct: 795 FYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVIC 854
Query: 236 IP 237
P
Sbjct: 855 FP 856
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 22/155 (14%)
Query: 225 EDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQ---EVS 281
ED + V + +P K + P IL LDSLK + N+R +L+ EW ++ E S
Sbjct: 901 EDSQSTEVNMSVPKKMCKR-PCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFS 959
Query: 282 PSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAM 341
+++ D VP+Q N DCG+++L ++E F ++ + +L +
Sbjct: 960 KTNMV--------------DLCPKVPKQDNSSDCGVYLLQYVESFFQDP---IVNFELPI 1002
Query: 342 FGKRWFRPEEASGLRIKIRNL-LKKQFQISSAECC 375
++WF R IR L LK Q C
Sbjct: 1003 HLEKWFPRHVIKTKREDIRELILKLHLQQQKGGSC 1037
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 74 RLRKEQNLVLLDEDESPVEDASEESEGSLHIETTEQADEFAECMIDAKIYYPSRVDPESV 133
+LR +Q L D+DE E + + I E+ I YP +
Sbjct: 644 QLRSKQELQFFDDDEEAGESHT------IFIGPVEKL-----------IVYPPPPAKGGI 686
Query: 134 EICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHK 193
+ D++ L+ +L I++FY++YL L+ A R H F+++FY +L + +
Sbjct: 687 SVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADR-IHIFSSFFYKRLNQR-ERR 744
Query: 194 GGDKDSFFIKFRR------WWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKE 240
+ + I+ +R W + V+IF+K ++ +P++E HW L ++C P E
Sbjct: 745 NPETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVCFPGLE 797
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 245 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRII 304
P IL +DSL+ ++ +R +L+ EW K S ++ + + +
Sbjct: 990 PCILLMDSLRGPSRSNVVKILREYLEVEWEVKKG----SKRSFSKDVMKGSNPK------ 1039
Query: 305 PVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLK 364
VPQQ N DCG++VL ++E F E +L M WF P R +IRN++
Sbjct: 1040 -VPQQNNFSDCGVYVLQYVESFFENPVLNF---ELPMNLMNWFPPPRMKTKREEIRNIIL 1095
Query: 365 K 365
K
Sbjct: 1096 K 1096
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 127 RVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKL 186
RV + + D+ L +L +MN Y L + P HFFN++FY KL
Sbjct: 374 RVSYKRHVLTMDDLGTLYGQNWLNDQVMNMYGD-LVMDTVPEK-----VHFFNSFFYDKL 427
Query: 187 KEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPI 246
+ KG D +RW K V+IF K +LIPIH +VHWSL+ + + +
Sbjct: 428 RT----KGYDG------VKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRR------T 471
Query: 247 ILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPV 306
I + DS + + R K YL+ E D + W+ + + V
Sbjct: 472 ITYFDSQR--------TLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFK------MNV 517
Query: 307 PQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFR 348
+Q ND DCG FVL + + P ++D+ ++ ++
Sbjct: 518 ARQNNDSDCGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYK 559
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 135 ICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVSHKG 194
+ D+ L +L +MN Y L + P HFFN++FY KL+ KG
Sbjct: 388 LTMDDLGTLYGQNWLNDQVMNMYGD-LVMDTVPEK-----VHFFNSFFYDKLRT----KG 437
Query: 195 GDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLK 254
D +RW K V+IF K +LIPIH +VHWSL+ + + + I + DS +
Sbjct: 438 YDG------VKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRR------TITYFDSQR 485
Query: 255 LHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYD 314
+ R K YL+ E D + W+ + + V +Q ND D
Sbjct: 486 --------TLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFK------MNVARQNNDSD 531
Query: 315 CGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFR 348
CG FVL + + P ++D+ ++ ++
Sbjct: 532 CGAFVLQYCKHLALSQPFSFTQQDMPKLRRQIYK 565
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 118 IDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHF 177
++ I YP + + D++ L +L I++FY++YL L+ A R H
Sbjct: 651 VEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADR-IHI 709
Query: 178 FNTYFYSKL--KEAVSHKGGD---KDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLV 232
F+++FY +L +E +H+ + + + + W + V+IF+K ++ +P++E HW L
Sbjct: 710 FSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLA 769
Query: 233 IICIPDKE 240
++C P E
Sbjct: 770 VVCFPGLE 777
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 245 PIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRII 304
P IL +DSL+ ++ +R +L+ EW K S ++ + + +
Sbjct: 971 PCILLMDSLRGPSRSNVVKILREYLEVEWEVKKG----SKRSFSKDVMKGSNPK------ 1020
Query: 305 PVPQQKNDYDCGLFVLFFMERFMEEAPERLKKKDLAMFGKRWFRPEEASGLRIKIRNLLK 364
VPQQ N DCG++VL ++E F E + +L M WF P R +IRN++
Sbjct: 1021 -VPQQNNFSDCGVYVLQYVESFFENP---ILSFELPMNLANWFPPPRMRTKREEIRNIIL 1076
Query: 365 K 365
K
Sbjct: 1077 K 1077
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 132 SVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLKEAVS 191
++ I D++ L +L ++NFY+ + + S + ++ H FNT+FY+ L+
Sbjct: 376 NIPITLKDLHTLRNRQWLNDEVINFYMNLIS-ERSKIDSSLPRVHGFNTFFYTSLQR--- 431
Query: 192 HKGGDKDSFFIKFRRWWKG--VNIFQKSYVLIPIHEDVHWSLVIICIPDKEDESGPIILH 249
+G + RRW K VNI V IP+H DVHW + +I K E +
Sbjct: 432 -RG------YAGVRRWAKKARVNIADMDAVFIPVHLDVHWCMAVINKSKKRFE------Y 478
Query: 250 LDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQ 309
DSL +F +R + E K V SD W++ +DD P+Q
Sbjct: 479 WDSLA-GSPGKVFDLLRDYYIAE---TKGAVDVSD-------WENF---MDDN---SPRQ 521
Query: 310 KNDYDCGLFVLFFMERFMEEAPERLKKKDL 339
+N +DCG+F E P + + D+
Sbjct: 522 RNGHDCGVFACKTAECVSRNVPVQFSQNDM 551
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 41/261 (15%)
Query: 129 DPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIR--DCHFFNTYFYSKL 186
D S I D L ++ I++F+ ++ +++S I+ H +++FY+KL
Sbjct: 438 DGSSYTITNQDFKCLFNKDWVNDSILDFFTKFY-IESSIEKSIIKREQVHLMSSFFYTKL 496
Query: 187 KEAVSHKGGDKDSFFIKFRRWWKGVNIFQKSYVLIPIHEDVHWSLVIICIPDK-----ED 241
+S+ ++ ++W ++F K YV+IPI+ HW II D ++
Sbjct: 497 ---ISNPAD----YYSNVKKWVNNTDLFSKKYVVIPINISYHWFSCIITNLDAILDFHQN 549
Query: 242 ESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHL------ 295
+ ++ D + ++ L NI +F + L+Q S PI E + +
Sbjct: 550 KDKNDAINSDEISINNPL---VNILTF-----DSLRQTHSREIDPIKEFLISYALDKYSI 601
Query: 296 ---PRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPE--------RLKKKDL-AMFG 343
+I + PVPQQ N DCG+ V+ + +F E E ++K K A
Sbjct: 602 QLDKTQIKMKTCPVPQQPNMSDCGVHVILNIRKFFENPVETIDVWKNSKIKSKHFTAKMI 661
Query: 344 KRWFRPEEASGLRIKIRNLLK 364
++F E + R +R+ LK
Sbjct: 662 NKYFDKNERNSARKNLRHTLK 682
>sp|Q09275|ULP4_CAEEL Putative thiol protease ulp-4 OS=Caenorhabditis elegans GN=ulp-4
PE=3 SV=2
Length = 382
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Query: 218 YVLIPIHEDVHWSLVIICIPDKEDESGPIILHLDSLKLHCSLSIFSNIRSFLKEEWNYLK 277
Y+++P++E HWSL +IC P I + L+ ++ + I SF+K +
Sbjct: 225 YIVVPVNEWEHWSLAVICHPFTAQARTVIFDSQLTADLNNLQNMATLIESFMKYSYEKRT 284
Query: 278 QEVSPSDLPIAERIWQHLPRRIDDRIIPVPQQKNDYDCGLFVLFFMERFMEEAPERLKKK 337
P LP LP+R+ PQQ N++DCG+F+ F RF+ P+ L
Sbjct: 285 GNAMPFPLPCI------LPQRM-------PQQTNNFDCGIFIAEFARRFLLSPPKDLDNF 331
Query: 338 DLA 340
D A
Sbjct: 332 DFA 334
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 47/198 (23%)
Query: 128 VDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTYFYSKLK 187
++ +++EI D LAP +L I+ F+++Y++ +++P A FN++FY+ L
Sbjct: 428 MNRDNIEITVRDFKTLAPRRWLNDTIIEFFMKYIE-KSTPNTVA------FNSFFYTNLS 480
Query: 188 EAVSHKGGDKDSFFIKFRRWW--KGVNIFQKSYVLIPIH-EDVHWSLVIICIPDKEDESG 244
E ++G RRW K I + + PI+ HW+L II + K
Sbjct: 481 ER-GYQG---------VRRWMKRKKTQIDKLDKIFTPINLNQSHWALGIIDLKKK----- 525
Query: 245 PIILHLDSLK---LHCSLSIFSNIRSFLKEEWNYLKQEVSPSDLPIAERIWQHLPRRIDD 301
I ++DSL S +I ++++ ++ EE + E D + HL
Sbjct: 526 -TIGYVDSLSNGPNAMSFAILTDLQKYVMEESKHTIGE----DFDLI-----HL------ 569
Query: 302 RIIPVPQQKNDYDCGLFV 319
PQQ N YDCG++V
Sbjct: 570 ---DCPQQPNGYDCGIYV 584
>sp|Q8CFI7|RPB2_MOUSE DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus
GN=Polr2b PE=2 SV=2
Length = 1174
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 122 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 181
+YYP + + + Y L PA + + Y Y Q + NR+ D FF +
Sbjct: 751 LYYPQKPLVTTRSMEYLRFREL-PAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSV 809
Query: 182 FYSKLKEAVSHKGGDKDSFFIKFRR 206
FY KE S KG D++ F K R
Sbjct: 810 FYRSYKEQESKKGFDQEEVFEKPTR 834
>sp|P30876|RPB2_HUMAN DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens
GN=POLR2B PE=1 SV=1
Length = 1174
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 122 IYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYLQLQASPTNRAIRDCHFFNTY 181
+YYP + + + Y L PA + + Y Y Q + NR+ D FF +
Sbjct: 751 LYYPQKPLVTTRSMEYLRFREL-PAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSV 809
Query: 182 FYSKLKEAVSHKGGDKDSFFIKFRR 206
FY KE S KG D++ F K R
Sbjct: 810 FYRSYKEQESKKGFDQEEVFEKPTR 834
>sp|Q54XR2|SENP8_DICDI Probable sentrin-specific protease 8 OS=Dictyostelium discoideum
GN=senp8 PE=3 SV=1
Length = 243
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 307 PQQKNDYDCGLFVLFFMERFME 328
PQQ+N YDCGL+VL +E ++
Sbjct: 166 PQQQNGYDCGLYVLSIIEELLK 187
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 33.1 bits (74), Expect = 3.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 12 RQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTC--PSHQSGENSSSCLPKKK 62
+ + R S+ W GD N +++ SL C PSH N+S CLP +K
Sbjct: 1111 KDSARCISKAW-VCDGDSDCEDNSDEENCESLVCKPPSHTCANNTSICLPPEK 1162
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 32.7 bits (73), Expect = 4.8, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 12 RQNVRSSSRKWPFHKGDKSFNSNGSQKDRASLTC--PSHQSGENSSSCLPKKK 62
+ + R S+ W GD N +++ SL C PSH N+S CLP K
Sbjct: 1113 KDSARCISKAW-VCDGDNDCEDNSDEENCESLACRPPSHPCANNTSVCLPPDK 1164
>sp|A1Z6W3|PRIC1_DROME Protein prickle OS=Drosophila melanogaster GN=pk PE=1 SV=1
Length = 1299
Score = 32.3 bits (72), Expect = 6.7, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 100 GSLHIETTEQA--DEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFY 157
G H++ Q+ D+ + C ++ + P + P+ V + ++ I Y+ SP +
Sbjct: 511 GGPHMDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPD-DKVPYVNSPGEQYR 569
Query: 158 IRYLQLQASPTNRAIRDCH 176
+R L Q P + +R CH
Sbjct: 570 VRQLLHQLPPHDNEVRYCH 588
>sp|Q292U2|PRIC1_DROPS Protein prickle OS=Drosophila pseudoobscura pseudoobscura GN=pk
PE=3 SV=3
Length = 1353
Score = 31.6 bits (70), Expect = 9.6, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 102 LHIETTEQADEFAECMIDAKIYYPSRVDPESVEICYTDINHLAPAAYLTSPIMNFYIRYL 161
+ ++ +D+ + C ++ + P + P+ V + ++ I Y+ SP + +R L
Sbjct: 548 MDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPD-DKVPYVNSPGEQYRVRQL 606
Query: 162 QLQASPTNRAIRDCH 176
Q P + +R CH
Sbjct: 607 LHQLPPHDNEVRYCH 621
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,102,428
Number of Sequences: 539616
Number of extensions: 6723731
Number of successful extensions: 16199
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 16063
Number of HSP's gapped (non-prelim): 95
length of query: 388
length of database: 191,569,459
effective HSP length: 119
effective length of query: 269
effective length of database: 127,355,155
effective search space: 34258536695
effective search space used: 34258536695
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)