BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016507
(388 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/379 (46%), Positives = 255/379 (67%), Gaps = 10/379 (2%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
T G+ I C+AA+A P +PLVI++V V PP + EVR++I+ T+LCH+D W KD +
Sbjct: 2 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGL 61
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLC----SAFPF 125
FP ILGHEA IP + A+C EC C+S K NLC SA
Sbjct: 62 FPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGV 121
Query: 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
I M D+ SRF + G+ I+HF+ S+FS+YTV+ V K+DPT P ++ CLL CG
Sbjct: 122 GI---MMNDRKSRF-SVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCG 177
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
V TG+GA W TA VE GS V IFGLG++GLAVAEGA+ GA+RIIG+D+ S+K+E K+F
Sbjct: 178 VPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 237
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
GV EFVN K+ DK + ++I+D+TDGG DY FEC+G S+++ A CC KGWG ++++GV
Sbjct: 238 GVNEFVNPKD-HDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 296
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 365
G ++S F+++ +G++ G+ FGG K+++ +P L+++YM+KE+++D+++TH +
Sbjct: 297 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLG 355
Query: 366 EINSAFDLLIKGKCLRCVI 384
EIN AFDLL +G CLRCV+
Sbjct: 356 EINKAFDLLHEGTCLRCVL 374
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 352 bits (902), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/381 (44%), Positives = 248/381 (65%), Gaps = 4/381 (1%)
Query: 7 SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
S+ T G+ I C+AA+A P +PLVI++V V PP + EVRV+++ T+LCH+D W KD
Sbjct: 17 SSATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDP 76
Query: 67 PAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 126
+FP +LGHEA IP + A+C EC C+S K NLC
Sbjct: 77 EGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAA 136
Query: 127 ISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
M D+ SRF + G+ I+HF+ S+FS+YTV+ V K+DP P + CLL CG
Sbjct: 137 TGVGVMMNDRKSRFS-INGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCG 195
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
V TG+GA W TA VE GS V +FGLG++GLAVAEGA+ GA+RIIG+D+ S+KF+ K F
Sbjct: 196 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNF 255
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
GVTEF+N K ++ + Q+I+D+TDGG DY FEC+G S+++ A CC KGWG ++++GV
Sbjct: 256 GVTEFINPKE-HEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGV 314
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 365
G ++S F+++ +G++ G+ FGG K++S +P L+ +Y+ KE+++D+++TH M
Sbjct: 315 AASGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLA 373
Query: 366 EINSAFDLLIKGKCLRCVIWM 386
+IN AFDL+ G CLR V+ M
Sbjct: 374 DINKAFDLMHDGDCLRVVLDM 394
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 294 bits (752), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 229/375 (61%), Gaps = 3/375 (0%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
+A + I+C+AA+A G+PL I+E+ V PP +HEVR++II T++CH+D D
Sbjct: 1 SANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
FP ILGHE IP ++ C EC C + K NLC
Sbjct: 61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+ D TSRF +G+TI H++ S+FSEYTV+ V K+DP P ++ CLL CG+STG
Sbjct: 121 GLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
GAA TA +E GS +FGLG +GLAV G ++ GA+RIIGVD+ +KF K FG TE
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
+N ++ K + +++I+MTDGG DY FEC+G +++ A C KGWG ++V+GV G
Sbjct: 240 CINPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
+++ F+++ +G+ G+ FGG K+ +P L+ YM K++++D+FVTH + F+EIN
Sbjct: 299 EEIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINK 357
Query: 370 AFDLLIKGKCLRCVI 384
AF+L+ GK +R V+
Sbjct: 358 AFELMHSGKSIRTVV 372
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 293 bits (751), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 228/374 (60%), Gaps = 3/374 (0%)
Query: 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
A + I+C+AA+A G+PL I+E+ V PP +HEVR++II T++CH+D D F
Sbjct: 2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
P ILGHE IP ++ C EC C + K NLC
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
+ D TSRF +G+TI H++ S+FSEYTV+ V K+DP P ++ CLL CG+STG
Sbjct: 122 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
GAA TA +E GS +FGLG +GLAV G ++ GA+RIIGVD+ +KF K FG TE
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
+N ++ K + +++I+MTDGG DY FEC+G +++ A C KGWG ++V+GV G
Sbjct: 241 INPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299
Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSA 370
+++ F+++ +G+ G+ FGG K+ +P L+ YM K++++D+FVTH + F+EIN A
Sbjct: 300 EIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKA 358
Query: 371 FDLLIKGKCLRCVI 384
F+L+ GK +R V+
Sbjct: 359 FELMHSGKSIRTVV 372
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 228/374 (60%), Gaps = 3/374 (0%)
Query: 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
A + I+C+AA+A G+PL I+E+ V PP +HEVR++II T++CH+D D F
Sbjct: 1 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
P ILGHE IP ++ C EC C + K NLC
Sbjct: 61 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
+ D TSRF +G+TI H++ S+FSEYTV+ V K+DP P ++ CLL CG+STG
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
GAA TA +E GS +FGLG +GLAV G ++ GA+RIIGVD+ +KF K FG TE
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
+N ++ K + +++I+MTDGG DY FEC+G +++ A C KGWG ++V+GV G
Sbjct: 240 INPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 298
Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSA 370
+++ F+++ +G+ G+ FGG K+ +P L+ YM K++++D+FVTH + F+EIN A
Sbjct: 299 EIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKA 357
Query: 371 FDLLIKGKCLRCVI 384
F+L+ GK +R V+
Sbjct: 358 FELMHSGKSIRTVV 371
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 290 bits (743), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 227/374 (60%), Gaps = 3/374 (0%)
Query: 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF 70
A + I+C+AA+A G+PL I+E+ V PP +HEVR++II T++CH+D D F
Sbjct: 1 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 71 PRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
P ILGH IP ++ C EC C + K NLC
Sbjct: 61 PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGV 190
+ D TSRF +G+TI H++ S+FSEYTV+ V K+DP P ++ CLL CG+STG
Sbjct: 121 LMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
GAA TA +E GS +FGLG +GLAV G ++ GA+RIIGVD+ +KF K FG TE
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
+N ++ K + +++I+MTDGG DY FEC+G +++ A C KGWG ++V+GV G
Sbjct: 240 INPQDF-SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 298
Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSA 370
+++ F+++ +G+ G+ FGG K+ +P L+ YM K++++D+FVTH + F+EIN A
Sbjct: 299 EIATRPFQLV-TGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKA 357
Query: 371 FDLLIKGKCLRCVI 384
F+L+ GK +R V+
Sbjct: 358 FELMHSGKSIRTVV 371
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 222/375 (59%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
T GK I+C+AA+A +PLVI+E+ VD P+++E+R++II T +CH+D+
Sbjct: 2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDG 61
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
FP +LGHE IP F++ C EC C+S K N C SP
Sbjct: 62 FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+ + +RF +G + F+ S+FS+YTV++ V K+DP+ P + CLL CGVSTG
Sbjct: 122 DVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
GAA TA VE GST +FGLG++GLA G GA RII VD+ +KFE K FG T+
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
FVN N + +SQ++ MT+GG D+ ECVG +++ A C KGWG ++++G
Sbjct: 241 FVNP-NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL- 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
++ +++ +G+ GS+FGG K K +P ++K Y+DK+++LD+F+TH M E +N
Sbjct: 299 HDVATRPIQLI-AGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVND 357
Query: 370 AFDLLIKGKCLRCVI 384
A DL+ GKC+R V+
Sbjct: 358 AIDLMKHGKCIRTVL 372
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 214/382 (56%), Gaps = 7/382 (1%)
Query: 7 SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF 66
S T GK I+C+AAIA G+PL I+EV V PP +HEVR++II TSLCH+D T K
Sbjct: 1 SMGTKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFE 60
Query: 67 PAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFK 126
FP I+GHEA IP + C +C C S NLC
Sbjct: 61 GLAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNL 120
Query: 127 ISP----WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLL 182
SP + D+TSRF +G+ ++HF S+FS+YTV+ ++ K+D R CLL
Sbjct: 121 KSPASDQQLMEDKTSRFT-CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLL 179
Query: 183 SCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242
CG STG GAA A V GST +FGLG +GL+ G + GA+RIIG+D+ SEKF
Sbjct: 180 GCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKA 239
Query: 243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 302
K G T+ +N ++ K + ++II++T GG D+ +C G + ++ A C GWG
Sbjct: 240 KALGATDCLNPRDL-HKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTF 298
Query: 303 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEM 362
+GV L++ E++ G+ + G+ FGG K+ IP L+ Y +K+ LD VTH +
Sbjct: 299 IGVAAGSKGLTVFPEELI-IGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTL 357
Query: 363 KFEEINSAFDLLIKGKCLRCVI 384
F++I+ AFDL+ +GK +R ++
Sbjct: 358 PFDKISEAFDLMNQGKSIRTIL 379
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 215/379 (56%), Gaps = 13/379 (3%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ +C SD A
Sbjct: 2 TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F+ C +C C+ +GNLC +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NL 115
Query: 130 WMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
MPR D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG
Sbjct: 116 SMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCG 174
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
STG G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K
Sbjct: 175 FSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV 234
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
G TE VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 235 GATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGV 293
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 365
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE
Sbjct: 294 PPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 352
Query: 366 EINSAFDLLIKGKCLRCVI 384
+IN FDLL GK +R ++
Sbjct: 353 KINEGFDLLRSGKSIRTIL 371
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 215/379 (56%), Gaps = 13/379 (3%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ +C SD A
Sbjct: 2 TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F+ C +C C+ +GNLC +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NL 115
Query: 130 WMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
MPR D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG
Sbjct: 116 SMPRGTMQDGTSRF-TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCG 174
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
STG G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K
Sbjct: 175 FSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV 234
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
G TE VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 235 GATECVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGV 293
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 365
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE
Sbjct: 294 PPDSQNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE 352
Query: 366 EINSAFDLLIKGKCLRCVI 384
+IN FDLL GK +R ++
Sbjct: 353 KINEGFDLLRSGKSIRTIL 371
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 265 bits (677), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 211/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 211/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS-GTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ ++F K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 210/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G +++ GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 264 bits (674), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 210/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G +++ GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 264 bits (674), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 210/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G +FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 263 bits (673), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 210/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 210/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP F C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++ V
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 211/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP + C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 261 bits (668), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 210/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 261 bits (668), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 217/375 (57%), Gaps = 5/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+E+ V PP + EVR++I+ T +C +D K +
Sbjct: 2 TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK-GTMVSK 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
FP I+GHEA IP FL C EC CR+ GNLC
Sbjct: 61 FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+ D T+RF +G+ +HHF++ S+F+EYTV+D + V K+D PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
GAA +T V+ GST V+FGLG +GL+V G + GA+RIIG+D+ +KFE G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
++ K+ K +S+++ +MT Y FE +G + +A A C +G ++V+GV
Sbjct: 239 CISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA 297
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
L+ +L +G+ G +FGGLK++ D+P L+ ++ K+ +LD+ +TH + F++I+
Sbjct: 298 KMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISE 356
Query: 370 AFDLLIKGKCLRCVI 384
F+LL G+ +R V+
Sbjct: 357 GFELLNSGQSIRTVL 371
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 261 bits (668), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 217/375 (57%), Gaps = 5/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+E+ V PP + EVR++I+ T +C +D K +
Sbjct: 2 TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK-GTMVSK 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
FP I+GHEA IP FL C EC CR+ GNLC
Sbjct: 61 FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGR 119
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+ D T+RF +G+ +HHF++ S+F+EYTV+D + V K+D PP + CL+ CG STG
Sbjct: 120 GVLADGTTRFT-CKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
GAA +T V+ GST V+FGLG +GL+V G + GA+RIIG+D+ +KFE G TE
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
++ K+ K +S+++ +MT Y FE +G + +A A C +G ++V+GV
Sbjct: 239 CISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA 297
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
L+ +L +G+ G +FGGLK++ D+P L+ ++ K+ +LD+ +TH + F++I+
Sbjct: 298 KMLTYDPM-LLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISE 356
Query: 370 AFDLLIKGKCLRCVI 384
F+LL G+ +R V+
Sbjct: 357 GFELLNSGQSIRTVL 371
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 261 bits (667), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/375 (37%), Positives = 210/375 (56%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ T +C SD
Sbjct: 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P I GHEA IP + C +C C+ +GN C +
Sbjct: 61 LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D TSRF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG GL+V G + GA RIIGVD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN ++ K + +++ +M++GG D+ FE +G + A +CC++ +G ++++GV
Sbjct: 240 CVNPQDY-KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L SG+ G++FGG K+K +P L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSMNPM-LLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL G+ +R ++
Sbjct: 358 GFDLLRSGESIRTIL 372
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 213/379 (56%), Gaps = 10/379 (2%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
T GK I+C+AAIA G PL I+E+ V PP + EVR+++I T +CH+D+ K A+
Sbjct: 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKK-KAL 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PFK-- 126
FP +LGHE IP F C C C S NLC FK
Sbjct: 61 FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 127 -ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
I + D+TSRF +G +I+HF+ VSSFS+YTV+ A++ +VD R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
S+G GAA TA V GST +FGLG +GL+ G ++ GA+RII +D+ EKF K
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
G T+ +N + DK V +I ++T GG DY +C G A ++ A C GWG V+G
Sbjct: 240 GATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 365
++++ + +V+ G+ + G+ FGG K+ +P L+ Y +K+ +LD VTH + FE
Sbjct: 299 KV--DEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFE 355
Query: 366 EINSAFDLLIKGKCLRCVI 384
IN A DL+ +GK +R ++
Sbjct: 356 SINDAIDLMKEGKSIRTIL 374
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 206/375 (54%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ +C SD +
Sbjct: 2 TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS-GNLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P ILGHEA IP F C +C C++ + N C
Sbjct: 61 LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D T RF G+ IHHFV VS+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTLQDGTRRF-TCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A + A V GST +FGLG +GL+V G + GA RII VD+ +KF K G TE
Sbjct: 180 YGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
+N ++ K + +++ +MTDGG D+ FE +G + + CC + G ++++GV
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L +G+ G++FGG K+K +P L+ +M K+ LD +T+ + FE+IN
Sbjct: 299 QNLSINPM-LLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL GK +R V+
Sbjct: 358 GFDLLRSGKSIRTVL 372
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 212/379 (55%), Gaps = 10/379 (2%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
T GK I+C+AAIA G PL I+E+ V PP + EVR+++I T +C +D+ K A+
Sbjct: 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KAL 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PFK-- 126
FP +LGHE IP F C C C S NLC FK
Sbjct: 61 FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 127 -ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCG 185
I + D+TSRF +G +I+HF+ VSSFS+YTV+ A++ +VD R CL+ CG
Sbjct: 121 TIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 186 VSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245
S+G GAA TA V GST +FGLG +GL+ G ++ GA+RII +D+ EKF K
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
G T+ +N + DK V +I ++T GG DY +C G A ++ A C GWG V+G
Sbjct: 240 GATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 365
++++ + +V+ G+ + G+ FGG K+ +P L+ Y +K+ +LD VTH + FE
Sbjct: 299 KV--DEMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFE 355
Query: 366 EINSAFDLLIKGKCLRCVI 384
IN A DL+ +GK +R ++
Sbjct: 356 SINDAIDLMKEGKSIRTIL 374
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I++V V PP ++EVR++++ +CH+D +
Sbjct: 2 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTD-DHVVSGNLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P ILGHEA IP F C +C C++ + N C
Sbjct: 61 LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D T RF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A A V GST +FGLG +GL+ G + GA RII VD+ +KF K G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
+N ++ K + +++ +MTDGG D+ FE +G + + CC + G ++++GV
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L +G+ G+++GG K+K IP L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL GK +R V+
Sbjct: 358 GFDLLHSGKSIRTVL 372
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 204/375 (54%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I++V V PP ++EVR++++ +C +D +
Sbjct: 2 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P ILGHEA IP F C +C C++ + N C
Sbjct: 61 LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D T RF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A A V GST +FGLG +GL+ G + GA RII VD+ +KF K G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
+N ++ K + +++ +MTDGG D+ FE +G + + CC + G ++++GV
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L +G+ G+++GG K+K IP L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL GK +R V+
Sbjct: 358 GFDLLHSGKSIRTVL 372
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 204/375 (54%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I++V V PP ++EVR++++ +C +D +
Sbjct: 2 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTD-DHVVSGNLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P ILGHEA IP F C +C C++ + N C
Sbjct: 61 LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D T RF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A A V GST +FGLG +GL+ G + GA RII VD+ +KF K G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
+N ++ K + +++ +MTDGG D+ FE +G + + CC + G ++++GV
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L +G+ G+++GG K+K IP L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL GK +R V+
Sbjct: 358 GFDLLHSGKSIRTVL 372
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 203/375 (54%), Gaps = 4/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I+C+AA+ +P I++V V PP ++EVR++++ +C +D +
Sbjct: 2 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTP 60
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P ILGHEA IP F C +C C++ + N C
Sbjct: 61 LPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPR 120
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+D T RF RG+ IHHF+ S+FS+YTV+D V K+D P + CL+ CG STG
Sbjct: 121 GTLQDGTRRFT-CRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G+A A V GST +FGLG +GL+ G + GA RII VD+ +KF K G TE
Sbjct: 180 YGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
+N ++ K + +++ +MTDGG D+ FE +G + + CC + G ++++GV
Sbjct: 240 CINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
LS++ +L +G+ G+++GG K+K IP L+ +M K+ LD +TH + FE+IN
Sbjct: 299 QNLSINPM-LLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINE 357
Query: 370 AFDLLIKGKCLRCVI 384
FDLL GK + V+
Sbjct: 358 GFDLLHSGKSICTVL 372
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 205/378 (54%), Gaps = 8/378 (2%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSD--VTFWKMKDFP 67
TAGK I+C+AA+ +P I+EV V PP +HEVR++++ +C +D V M
Sbjct: 2 TAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMV--- 58
Query: 68 AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKI 127
P ILGHEA IP + C +C C++ + N C
Sbjct: 59 TPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSN 118
Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
+D TSRF R + IHHF+ +S+FS+YTV+D V K+D P + CL+ CG S
Sbjct: 119 PQGTLQDGTSRFT-CRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
TG G+A A V GST +FGLG +GL+ G + GA RII VD+ +KF K G
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307
TE +N ++ K + +++ +MTDGG D+ FE +G + + CC + G ++++GV
Sbjct: 238 TECINPQDY-KKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 308 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 367
LS++ +L +G+ G++ GG K+K +P L+ +M K+ LD +TH + FE+I
Sbjct: 297 DSQNLSMNPM-LLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKI 355
Query: 368 NSAFDLLIKGKCLRCVIW 385
N FDLL GK +R ++
Sbjct: 356 NEGFDLLHSGKSIRTILM 373
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 207/375 (55%), Gaps = 6/375 (1%)
Query: 10 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV 69
TAGK I C+AA+A P +PL ++ + V PP +HEVR++I+ + +C SD + K + P+
Sbjct: 3 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK-EIIPSK 61
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
FP ILGHEA+ IP F+ C C C+S N C
Sbjct: 62 FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTG 189
+ D TSRF RG+ I++ + S+F+EYTV+ V K+DP P +CL+ CG +TG
Sbjct: 122 GLMADMTSRF-TCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLIGCGFATG 179
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
GAA TA V GST +FGLG +G + G + GA+RIIGV +KF G TE
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
+N K+ DK + ++I + T+GG DY EC G + A G G T+VLG+ P
Sbjct: 240 CLNPKDY-DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASP- 297
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 369
++ +L +G+ L GS+FGG K + ++ L+ YM K++ ++ V+ ++ ++IN
Sbjct: 298 NERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINK 356
Query: 370 AFDLLIKGKCLRCVI 384
AF+LL G+ +R ++
Sbjct: 357 AFELLSSGQGVRSIM 371
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 8/367 (2%)
Query: 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEA 78
AA+ G + + + P EV V+++ T +CH+D+ K +P P +LGHE
Sbjct: 9 AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK-YPVPLPAVLGHEG 67
Query: 79 IXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAF-PFKISPWMPRDQTS 137
+ + C +C C + CS F S +
Sbjct: 68 SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHA 126
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
+G HF + SSF+ Y + + VKV VP L CG+ TG GA
Sbjct: 127 LCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINAL 186
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
V S+ V +G G++GL+ A++CGA+ II VD++ + E+ K+ G T +NSK
Sbjct: 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT-- 244
Query: 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317
+ I ++TDGG ++ E G ++++ GK V+G Q G+
Sbjct: 245 -QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGI-LGKIAVVGAPQLGTTAQFDVN 302
Query: 318 EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 377
++L GK ++G + G K IP L++ Y + D+ V F+EIN A KG
Sbjct: 303 DLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKG 361
Query: 378 KCLRCVI 384
L+ +I
Sbjct: 362 ITLKPII 368
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 147/368 (39%), Gaps = 47/368 (12%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFPRI 73
+AA+ A G+PL IDEV + P +++V I + +CH+D+ W +K P P I
Sbjct: 27 KAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNP---PFI 83
Query: 74 LGHEAIX-XXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
GHE + IP C C C LC
Sbjct: 84 PGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE----------- 132
Query: 133 RDQTSRFKDLRGETIHHFVSVS-SFSEYTVLDIAHVVKVDPTVPPNR-ACLLSCGVSTGV 190
E ++ SV+ F+EY V D V + + N A +L GV+ V
Sbjct: 133 ------------EQLNTGYSVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT--V 178
Query: 191 GAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250
+ + + G VVI G+G +G + AR G + VD+ K ++ +R G T
Sbjct: 179 YKGLKVTDTKPGDWVVISGIGGLGHMAVQYARAMG-LNVAAVDIDDRKLDLARRLGATVT 237
Query: 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS 310
VN+K D + I TDGGA ++A + G T+ L PG
Sbjct: 238 VNAKTVADPAA--YIRKETDGGAQGVLVTAVSPKAFEQALGMVAR--GGTVSLNGLPPGD 293
Query: 311 QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSA 370
LS F ++ +G + GS+ G + D+ L D ++ K K E+IN+
Sbjct: 294 -FPLSIFNMVLNGVTVRGSIVG---TRLDLQESLDFAADGKV---KATIQTGKLEDINAI 346
Query: 371 FDLLIKGK 378
FD + +G
Sbjct: 347 FDDMRQGN 354
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 151/383 (39%), Gaps = 33/383 (8%)
Query: 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRIL 74
++ A + +PLV E + + V I+ +C SDV ++ +D P IL
Sbjct: 16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75
Query: 75 GHEAIXXXXXXXXXXXXXXXXXXXIPHFLA-----DCTECVGCR-SKKGNLCSAFPFKIS 128
GHE + C EC C+ SK+ LC P +
Sbjct: 76 GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLC---PNRKV 132
Query: 129 PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AHVVKVDPTVPPNRACLLSCGVS 187
+ R S + LRG +S + VLD V+KV + + C +
Sbjct: 133 YGINRG-CSEYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGA 181
Query: 188 TGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247
T A G TVVI G G +GL AR GA +I + + ++ + G
Sbjct: 182 TAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA 241
Query: 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
+N + + + I+D+T G GAD+ E G + + E R+G G V GV
Sbjct: 242 DLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVA 300
Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRY----MDKELELDKFVTHEM 362
P + +E L +L + F G+ SD +K + +L L K +TH +
Sbjct: 301 VPQDPVPFKVYEWL----VLKNATFKGIWV-SDTSHFVKTVSITSRNYQL-LSKLITHRL 354
Query: 363 KFEEINSAFDLLIKGKCLRCVIW 385
+E N A +L+ + L+ +++
Sbjct: 355 PLKEANKALELMESREALKVILY 377
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 54/348 (15%)
Query: 31 IDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE--AIXXXXXXXXX 88
+ V + P ++ V++ +C +D +FP+ P LGHE I
Sbjct: 37 VRNVGIPEPGPDDLLVKVEACGICGTDRHLLH-GEFPSTPPVTLGHEFCGIVVEAGSAVR 95
Query: 89 XXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148
P+ C C C++ + NLC ++LR IH
Sbjct: 96 DIAPGARITGDPNI--SCGRCPQCQAGRVNLC-------------------RNLRAIGIH 134
Query: 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACL---LSCGVSTGVGAAWRTANVEVGSTV 205
F+EY ++ ++ T+ P L+C + + ++ GSTV
Sbjct: 135 RD---GGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLH-----GVDLSGIKAGSTV 186
Query: 206 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 265
I G G IGL + ARL GAT +I + K + + G T V+ + GD V + I
Sbjct: 187 AILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD-PSAGD--VVEAI 243
Query: 266 ---IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 322
+ + GG D EC G+A V+++ + G G ++LGV G ++ + F++L
Sbjct: 244 AGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFR 302
Query: 323 GKILMGSLFGGLKAKSDIPILLKRYMD----KELELDKFVTHEMKFEE 366
++GS P + +R D +E+D+ ++ + +E
Sbjct: 303 ELRVLGSFIN--------PFVHRRAADLVATGAIEIDRXISRRISLDE 342
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 142/373 (38%), Gaps = 59/373 (15%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTF----WKMKDFPAVFPRI 73
+AA+ A G PL IDEV V P +V+V+I + +CH+D+ W +K P I
Sbjct: 4 KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK---PTLPFI 60
Query: 74 LGHEAIXXXXXXXXXXXXXXXX-XXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
GHE + +P + C C C LC
Sbjct: 61 PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE----------- 109
Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR------ACLLSCGV 186
+ Q + + G + EY V D +V + P++ A +L GV
Sbjct: 110 KQQNTGYSVNGG-----------YGEYVVADPNYV-----GLLPDKVGFVEIAPILCAGV 153
Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
+ V + + G VVI G+G +G + AR G R+ VD+ K + +R G
Sbjct: 154 T--VYKGLKVTDTRPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLG 210
Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
VN+++ + Q I GGA +A R+ G TI L
Sbjct: 211 AEVAVNARDTDPAAWLQKEI----GGAHGVLVTAVSPKAFSQAIGMVRR--GGTIALNGL 264
Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELD-KFVTHEMKFE 365
PG F+V+ G + GS+ G +SD L+ +D D K K +
Sbjct: 265 PPGD-FGTPIFDVVLKGITIRGSIVG---TRSD----LQESLDFAAHGDVKATVSTAKLD 316
Query: 366 EINSAFDLLIKGK 378
++N F L +GK
Sbjct: 317 DVNDVFGRLREGK 329
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 144/365 (39%), Gaps = 43/365 (11%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV--FPRILG 75
+AA+ EPL I EV + EV VRI +CH+D+ D+P P I G
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDL-HAAHGDWPVKPKLPLIPG 60
Query: 76 HEAIXXXXXXX-XXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
HE + IP + C C C S + LC
Sbjct: 61 HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC------------EH 108
Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
Q + + G ++EY +VVK+ + A + C GV+T A
Sbjct: 109 QKNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KA 156
Query: 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
+ + G V I+G+G +G + A+ G ++ VD+ EK E+ K G VN
Sbjct: 157 LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNP 215
Query: 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 313
K + + GG Q AY R+G G +++G+ P ++
Sbjct: 216 L----KEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGL--PPEEMP 268
Query: 314 LSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 373
+ F+ + +G ++GS+ G + D+ L+ + ++ K + E+IN FD
Sbjct: 269 IPIFDTVLNGIKIIGSIVG---TRKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDR 322
Query: 374 LIKGK 378
++KG+
Sbjct: 323 MLKGQ 327
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 145/370 (39%), Gaps = 45/370 (12%)
Query: 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA--VFP 71
P +AA+ A G PL I+EV V P +V V+I + +CH+D+ + D+P P
Sbjct: 4 PQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE-GDWPVKPPLP 62
Query: 72 RILGHEAIXXXXXXXXXXXXXXXX-XXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPW 130
I GHE + IP C C C + LC +
Sbjct: 63 FIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES-------- 114
Query: 131 MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP-PNRACLLSCGVSTG 189
Q + + G ++EY + D +V + V A +L GV+
Sbjct: 115 ----QQNTGYSVNG----------GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVY 160
Query: 190 VGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
G + N G V I G+G +G + AR G + +D+ K E+ ++ G +
Sbjct: 161 KG--LKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAIDIDDAKLELARKLGASL 217
Query: 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 309
VN++ + V I D+ GGA S +A R+ G TI L V P
Sbjct: 218 TVNARQ--EDPVEAIQRDI--GGAHGVLVTAVSNSAFGQAIGMARR--GGTIAL-VGLPP 270
Query: 310 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE-LDKFVTHEMKFEEIN 368
F+V+ G + GS+ G ++D L+ +D E L K H K ++IN
Sbjct: 271 GDFPTPIFDVVLKGLHIAGSIVG---TRAD----LQEALDFAGEGLVKATIHPGKLDDIN 323
Query: 369 SAFDLLIKGK 378
D + G+
Sbjct: 324 QILDQMRAGQ 333
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 143/365 (39%), Gaps = 43/365 (11%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV--FPRILG 75
+AA+ EPL I EV + EV VRI +CH+D+ D+P P I G
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDL-HAAHGDWPVKPKLPLIPG 60
Query: 76 HEAIXXXXXXX-XXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
HE + IP + C C C S + LC
Sbjct: 61 HEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC------------EH 108
Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAA 193
Q + + G ++EY +VVK+ + A + C GV+T A
Sbjct: 109 QKNAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KA 156
Query: 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
+ + G V I+G+G G + A+ G ++ VD+ EK E+ K G VN
Sbjct: 157 LKVTGAKPGEWVAIYGIGGFGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNP 215
Query: 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS 313
K + + GG Q AY R+G G +++G+ P ++
Sbjct: 216 L----KEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGL--PPEEMP 268
Query: 314 LSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 373
+ F+ + +G ++GS+ G + D+ L+ + ++ K + E+IN FD
Sbjct: 269 IPIFDTVLNGIKIIGSIVG---TRKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDR 322
Query: 374 LIKGK 378
++KG+
Sbjct: 323 MLKGQ 327
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
+F +++ F V+ +++AH+ K +P A ++ ++TG A A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
++E+G+TV + G+G +GL GA+L GA RII V + K +G T+ VN K
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--- 219
Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
D + I+++T+G G D G A ++ A + G G + G L +
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GTIANVNYFGEGEVLPVPR 278
Query: 317 FE----VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAF 371
E + H K + G L G + + + I L Y K ++ K VTH + F+ I AF
Sbjct: 279 LEWGCGMAH--KTIKGGLCPGGRLRMERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAF 334
Query: 372 DLL 374
L+
Sbjct: 335 MLM 337
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 22/243 (9%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
+F +++ F V+ +++AH+ K +P A ++ ++TG A A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
++E+G+TV + G+G +GL GA+L GA RII V + K +G T+ VN K
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK--- 219
Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
D + I+++T+G G D G A ++ A + G G + G L +
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GTIANVNYFGEGEVLDVPR 278
Query: 317 FE----VLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAF 371
E + H K + G L G + + + I L Y K ++ K VTH + F+ I AF
Sbjct: 279 LEWGCGMAH--KTIKGGLCPGGRLRMERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAF 334
Query: 372 DLL 374
L+
Sbjct: 335 MLM 337
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 14/217 (6%)
Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 221
+++AH+ K +P A ++ ++TG A A++E+GS+VV+ G+G++GL GA
Sbjct: 131 MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGA 186
Query: 222 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV 280
+L GA RIIGV E K +G T+ +N KN + ++ +T+G G D
Sbjct: 187 KLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKGVDRVIMAG 243
Query: 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL--KAKS 338
G + + +A + G I+ ++ GS +L V + ++ GGL +
Sbjct: 244 GGSETLSQAVKMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL 300
Query: 339 DIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLL 374
+ L+ K ++ K VTH + F+ I AF L+
Sbjct: 301 RMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLM 337
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 221
+++AH+ K +P A ++ ++TG A A++++GS+VV+ G+G++GL GA
Sbjct: 131 MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGA 186
Query: 222 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV 280
+L GA RIIGV E K +G T+ +N KN + ++ +T+G G D
Sbjct: 187 KLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKGVDRVIMAG 243
Query: 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL--KAKS 338
G + + +A + + G I+ ++ GS +L V + ++ GGL +
Sbjct: 244 GGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL 300
Query: 339 DIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLL 374
+ L+ K ++ K VTH + F+ I AF L+
Sbjct: 301 RMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLM 337
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 136/349 (38%), Gaps = 36/349 (10%)
Query: 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHEAIXXXXXX 85
L +++ + P EV +++ +C SDV ++ ++ DF P ++GHEA
Sbjct: 16 LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 86 XXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 145
C C C+ K NLC F +P P D G
Sbjct: 76 GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP--PDD---------GN 124
Query: 146 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205
++V + F K+ V LL +S GV A R A V++G+TV
Sbjct: 125 LARYYVHAADFCH----------KLPDNVSLEEGALLE-PLSVGV-HACRRAGVQLGTTV 172
Query: 206 VIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQ 263
++ G G IGL A+ GA ++ + E+ K G VT V+ + S+ +
Sbjct: 173 LVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIE 231
Query: 264 IIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG 323
I + +C G + R G G +++G+ GSQ+ +
Sbjct: 232 RIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGM---GSQMVTVPLVNACAR 287
Query: 324 KILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 372
+I + S+F + +D PI L+ + + VTH K E+ AF+
Sbjct: 288 EIDIKSVF---RYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFE 333
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 143/368 (38%), Gaps = 36/368 (9%)
Query: 21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHE 77
+ PG+ L ++ + P +EV +++ +C SDV +W ++ DF P +LGHE
Sbjct: 11 VVHGPGD-LRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHE 69
Query: 78 AIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QT 136
A A C+ + NL F +P P D
Sbjct: 70 ASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATP--PDDGNL 127
Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
RF + +F E +++ LS G+ A R
Sbjct: 128 CRFYKHNANFCYKLPDNVTFEEGALIEP-----------------LSVGIH-----ACRR 165
Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
A V +G+ V++ G G IGL A+ GA +++ D+ + + K G + N
Sbjct: 166 AGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNE 225
Query: 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
+ +++ + + + EC G+ + +Q G G +++G+ GS+ ++S
Sbjct: 226 SPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSG-GTLVLVGL---GSE--MTS 279
Query: 317 FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK 376
++H+ + + G + + P+ + K + + VTH E+ AF+ K
Sbjct: 280 VPLVHAATREV-DIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPLEKALEAFETSKK 338
Query: 377 GKCLRCVI 384
G L+ +I
Sbjct: 339 GLGLKVMI 346
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 102/267 (38%), Gaps = 26/267 (9%)
Query: 27 EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKM--KDFPAVFPRILGHEAIXXXXX 84
EP+V+D + P E+ +++ LCHSD+ M + P LGHE +
Sbjct: 12 EPVVVD-IPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAE 70
Query: 85 XXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 144
+ C C C + N C+ R DL G
Sbjct: 71 LGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT----------------RAADL-G 113
Query: 145 ETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGS 203
T S S +EY ++D A H+V + P A L G++ + + GS
Sbjct: 114 ITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGS 173
Query: 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQ 263
T V+ G+G +G + R A R+I VD+ ++ + + G V S +
Sbjct: 174 TAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG----AGAAD 229
Query: 264 IIIDMTDG-GADYCFECVGLASLVQEA 289
I ++T G GA F+ VG S + A
Sbjct: 230 AIRELTGGQGATAVFDFVGAQSTIDTA 256
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 18/231 (7%)
Query: 156 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 213
F EY ++ A ++ + +P A +++ ++TG A A++E+G+TV + G+G +
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIELGATVAVLGIGPV 178
Query: 214 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272
GL GA+L GA RII V + K +G T+ VN K D + I+++T+G G
Sbjct: 179 GLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYK---DGPIESQIMNLTEGKG 235
Query: 273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE----VLHSGKILMG 328
D G A ++ A + G G + G L + E + H K + G
Sbjct: 236 VDAAIIAGGNADIMATAVKIVKPG-GTIANVNYFGEGEVLPVPRLEWGCGMAH--KTIKG 292
Query: 329 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 378
L G + +++ +L + ++L K VTH F+ I A LL+K K
Sbjct: 293 GLCPGGRLRAE--MLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 33/344 (9%)
Query: 41 SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIP 100
S++ VR + S C SD+ ILGHEA+ I
Sbjct: 24 SYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVI- 82
Query: 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYT 160
C + + + FP + + + S FKD F EY
Sbjct: 83 ------VPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKD------------GVFGEYF 124
Query: 161 VLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
++ A ++ + +P A +++ ++TG A A++++GS+VV+ G+G++GL
Sbjct: 125 HVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGI 183
Query: 219 EGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277
GA+L GA RIIGV E K +G T+ +N KN + ++ +T+G G D
Sbjct: 184 AGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKGVDRVI 240
Query: 278 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL--K 335
G + + +A + + G I+ ++ GS +L V + ++ GGL
Sbjct: 241 MAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG 297
Query: 336 AKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 378
+ +L + ++L K VTH F+ I A LL+K K
Sbjct: 298 GRLRAEMLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 153/379 (40%), Gaps = 58/379 (15%)
Query: 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF--PR 72
++ +AA+ EPL I++V + P EV +RI +C +D+ WK + F P
Sbjct: 2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61
Query: 73 ILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
ILGHE + D T C CR K N+C +I P
Sbjct: 62 ILGHENAGTIVEVGELAKVKKGDNVVVYATWGDLT-CRYCREGKFNICKN---QIIP--- 114
Query: 133 RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-VVKVDPTVPPNRACLLSCGVSTGVG 191
G+T + FSEY ++ + +VK++ P A L G +T +G
Sbjct: 115 -----------GQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTSMG 157
Query: 192 AAWRTANVEVGS----TVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFG 246
A R A + V++ G+G + + + + L I+G+ + + G
Sbjct: 158 AI-RQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG 216
Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305
++V+ K +I +TDG GA + VG + G I++G+
Sbjct: 217 -ADYVSEM----KDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQ-EGAIILVGM 270
Query: 306 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPIL-----LKRYMDKELELDKFVTH 360
+ G ++SL +F+ K L+GS +G L D+ L +K Y+ K
Sbjct: 271 E--GKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYIIK---------- 318
Query: 361 EMKFEEINSAFDLLIKGKC 379
+ ++IN AF L +G+
Sbjct: 319 -VPLDDINKAFTNLDEGRV 336
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 14/229 (6%)
Query: 156 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 213
F EY ++ A ++ + +P A +++ ++TG A A++++GS+VV+ G+G++
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 214 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272
GL GA+L GA RIIGV E K +G T+ +N KN + ++ +T+G G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIVDQVMKLTNGKG 235
Query: 273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
D G + + +A + + G I+ ++ GS +L V + ++ G
Sbjct: 236 VDRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKG 292
Query: 333 GL--KAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 378
GL + +L + ++L K VTH F+ I A LL+K K
Sbjct: 293 GLCPGGRLRAEMLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 149/375 (39%), Gaps = 41/375 (10%)
Query: 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILG 75
A T PG + EV V P EV ++++ TS+C +D+ ++ ++ P+I G
Sbjct: 6 AIXKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXG 65
Query: 76 HEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
HE C +C CR + ++C Q
Sbjct: 66 HEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVC--------------Q 111
Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
++ + + + F+EY V+ ++ K ++PP A L +G A
Sbjct: 112 NTKIFGVDTDGV--------FAEYAVVPAQNIWKNPKSIPPEYATL-----QEPLGNAVD 158
Query: 196 T--ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
T A G +V+I G G +GL A+ GA +I + + E+ K+ G +N
Sbjct: 159 TVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP 218
Query: 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
++ V + + D+TDG G D E G +++ G+ +LG+ PG ++
Sbjct: 219 F---EEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL-YPG-KV 272
Query: 313 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAF 371
++ F L K L G + + +L LD +TH+ K F++ AF
Sbjct: 273 TI-DFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAF 331
Query: 372 DLLIKGKCLRCVIWM 386
+L GK + V +
Sbjct: 332 ELXRAGKTGKVVFXL 346
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 149/375 (39%), Gaps = 41/375 (10%)
Query: 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PRILG 75
A T PG + EV V P EV ++++ TS+C +D+ ++ ++ P+I G
Sbjct: 7 AIXKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXG 66
Query: 76 HEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ 135
HE C +C CR + ++C Q
Sbjct: 67 HEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVC--------------Q 112
Query: 136 TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR 195
++ + + + F+EY V+ ++ K ++PP A L +G A
Sbjct: 113 NTKIFGVDTDGV--------FAEYAVVPAQNIWKNPKSIPPEYATL-----QEPLGNAVD 159
Query: 196 T--ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253
T A G +V+I G G +GL A+ GA +I + + E+ K+ G +N
Sbjct: 160 TVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP 219
Query: 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL 312
++ V + + D+TDG G D E G +++ G+ +LG+ PG ++
Sbjct: 220 F---EEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL-YPG-KV 273
Query: 313 SLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAF 371
++ F L K L G + + +L LD +TH+ K F++ AF
Sbjct: 274 TI-DFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAF 332
Query: 372 DLLIKGKCLRCVIWM 386
+L GK + V +
Sbjct: 333 ELXRAGKTGKVVFXL 347
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 156 FSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSI 213
F EY ++ A ++ + +P A +++ ++TG A A++E+GS+VV+ G+G++
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAV 178
Query: 214 GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272
GL GA+L GA RIIGV E K +G T+ +N KN + ++ +T+G G
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG---HIEDQVMKLTNGKG 235
Query: 273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332
D G + + +A + G I+ ++ GS +L V + ++ G
Sbjct: 236 VDRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDALLIPRVEWGCGMAHKTIKG 292
Query: 333 GL--KAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDLLIKGK 378
GL + L + ++L K VTH F+ I A LL+K K
Sbjct: 293 GLCPGGRLRAERLRDMVVYNRVDLSKLVTHVYHGFDHIEEAL-LLMKDK 340
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 140/368 (38%), Gaps = 36/368 (9%)
Query: 21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHE 77
+ PG+ L ++ + P +EV +R+ +C SDV +W ++ +F P +LGHE
Sbjct: 12 VVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHE 70
Query: 78 AIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QT 136
A A C+ + NL + F +P P D
Sbjct: 71 ASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATP--PDDGNL 128
Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
RF + +F E +++ LS G+ A R
Sbjct: 129 CRFYKHNAAFCYKLPDNVTFEEGALIEP-----------------LSVGIH-----ACRR 166
Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
V +G V++ G G IG+ A+ GA +++ D+ + + K G +
Sbjct: 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKE 226
Query: 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
+ +++ + + EC G + +Q R G G +++G+ GS+ +++
Sbjct: 227 SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL---GSE--MTT 280
Query: 317 FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK 376
+LH+ I + G + + P+ + K + + VTH E+ AF+ K
Sbjct: 281 VPLLHAA-IREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKK 339
Query: 377 GKCLRCVI 384
G L+ ++
Sbjct: 340 GLGLKIML 347
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 154 SSFSEYTVLDIAHVVKVDPT-------VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVV 206
S+F + ++ HV + D + P A +LS V+TG A AN+++G TV
Sbjct: 113 SNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGA-ELANIKLGDTVC 171
Query: 207 IFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 266
+ G+G +GL GA GA RI V +I +G T+ +N KN GD + + I+
Sbjct: 172 VIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-GD--IVEQIL 228
Query: 267 DMTDG-GADYCFECVGLASLVQEAYACCRKG--WGKTIVLGVDQPGSQLSLSSFEVLHSG 323
TDG G D G +A + G G LG + + S + V
Sbjct: 229 KATDGKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLG-EGDNIDIPRSEWGVGMGH 287
Query: 324 KILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 375
K + G L G + + + L +L+ K +TH +FE + D L+
Sbjct: 288 KHIHGGLTPGGRVR--MEKLASLISTGKLDTSKLITH--RFEGLEKVEDALM 335
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 138 RFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA 197
+F +++ F V+ +++AH+ K +P A ++ ++TG A A
Sbjct: 111 KFSNVKDGVFGEFFHVNDAD----MNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257
N+++G TV + G+G +GL GA GA RI V +I +G T+ +N KN G
Sbjct: 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-G 221
Query: 258 DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKG--WGKTIVLGVDQPGSQLSL 314
D + + I+ TDG G D G +A + G G LG + +
Sbjct: 222 D--IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG-EGDNIDIPR 278
Query: 315 SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-FEEINSAFDL 373
S + V K + G L G + + + I L Y K ++ K VTH + F+ I AF L
Sbjct: 279 SEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFY--KRVDPSKLVTHVFRGFDNIEKAFML 336
Query: 374 L 374
+
Sbjct: 337 M 337
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 155/399 (38%), Gaps = 57/399 (14%)
Query: 1 MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPN---SHEVRVRIICTSLCHSD 57
M IE+ +++ G + +AA +PL I++V D P +V VRI +CH+D
Sbjct: 1 MRIEQDFSQSLGVE-RLKAARLHEYNKPLRIEDV--DYPRLEGRFDVIVRIAGAGVCHTD 57
Query: 58 VTF----WKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCR 113
+ W P P LGHE + I H C+ CR
Sbjct: 58 LHLVQGMWHELLQPK-LPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACR 116
Query: 114 SKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173
+ + C F P + D F+E+ V+K+
Sbjct: 117 AGEDMHCENLEF---PGLNID-------------------GGFAEFMRTSHRSVIKLPKD 154
Query: 174 VPPNR----ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRI 229
+ + A L G++ + G+ V I G+G +G + ++ +
Sbjct: 155 ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 214
Query: 230 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 288
I +DV EK ++ +R G V+++ K V +++T G G + + VG + V
Sbjct: 215 IALDVKEEKLKLAERLGADHVVDARRDPVKQV----MELTRGRGVNVAMDFVGSQATVDY 270
Query: 289 A-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG-LKAKSDIPILLKR 346
Y R G+ I++G G +L + V+ S GSL G ++ + + L+
Sbjct: 271 TPYLLGR--MGRLIIVGY---GGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQG 325
Query: 347 YMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 384
+ E+++ K +EIN + L KG+ L R V+
Sbjct: 326 KVRVEVDIH-------KLDEINDVLERLEKGEVLGRAVL 357
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 146/363 (40%), Gaps = 52/363 (14%)
Query: 26 GEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAVFPRILGHE 77
G+PL ++++ + P +V ++I +CHSDV + ++D P LGHE
Sbjct: 10 GKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78 AIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP-WMPRDQT 136
+ C CR + +LC SP W+ +
Sbjct: 70 IAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCD------SPRWLGINYD 123
Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVSTGVGAAWR 195
+ + +V V + L V+ P L+C GV+T A R
Sbjct: 124 GAYAE--------YVLVPHYKYLYKLRRLSAVEAAP---------LTCSGVTTY--RAVR 164
Query: 196 TANVEVGSTVVIFG----LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
A+++ T+V+ G LG++ + +A+ + GAT IIGVDV E E KR G +
Sbjct: 165 KASLDPSKTLVVIGAGGGLGTMAIQIAKA--VSGAT-IIGVDVREEALEAAKRAGADYVI 221
Query: 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311
N+ + VS+I GAD + + + Y GK +++G+ G+
Sbjct: 222 NASS--QDPVSEIRRITQGKGADAVID-LNNSEKTLSIYPYVLAKQGKYVMVGLF--GAD 276
Query: 312 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAF 371
L + + + +GSL G +SD ++ + + ++ VT MK EE N A
Sbjct: 277 LKYHAPLITLNEVQFIGSLVGN---QSDFLGIMS--LAEAGKVKPMVTKTMKLEEANEAI 331
Query: 372 DLL 374
D L
Sbjct: 332 DNL 334
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 154 SSFSEYTVLDIAHVVKVDPT-------VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVV 206
S+F + ++ HV + D + P A +LS V+TG A AN+++G TV
Sbjct: 113 SNFKDGVFSEVFHVNEADANLALLPRDIKPEDAVMLSDMVTTGFHGA-ELANIKLGDTVC 171
Query: 207 IFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 266
+ G+G +GL GA GA RI V +I +G T+ +N KN GD + + I+
Sbjct: 172 VIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN-GD--IVEQIL 228
Query: 267 DMTDG-GADYCFECVGLASLVQEAYACCRKG--WGKTIVLGVDQPGSQLSLSSFEVLHSG 323
TDG G D G +A + G G LG + + S + V
Sbjct: 229 KATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG-EGDNIPIPRSEWGVGMGH 287
Query: 324 KILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 375
K + G L G + + + L +L+ K +TH +FE + D L+
Sbjct: 288 KHIHGGLTPGGRVR--MEKLASLISTGKLDTSKLITH--RFEGLEKVEDALM 335
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 147/381 (38%), Gaps = 49/381 (12%)
Query: 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVF---PR 72
+ +A + T P + EV V P EV ++++ TS+C +D+ ++ ++ P+
Sbjct: 4 KMQAIMKTKPAYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ 63
Query: 73 ILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP 132
I+GHE C +C C+ + ++C
Sbjct: 64 IMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQ----------- 112
Query: 133 RDQTSRFK-DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
T F D+ G F+ Y ++ + K +PP A L +G
Sbjct: 113 --NTKIFGVDMDG----------VFAHYAIVPAKNAWKNPKDMPPEYAAL-----QEPLG 155
Query: 192 AAWRT--ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
A T A G + +I G G +GL A+ GA +I + + ++ K+ G
Sbjct: 156 NAVDTVLAGPIAGRSTLITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADY 215
Query: 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 308
VN ++ + ++D+TDG G + E G +++ G G+ +LG+
Sbjct: 216 VVNPF---EEDPVKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPG-GRVSLLGLFPR 271
Query: 309 GSQLSLSS---FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMK-F 364
+ ++ F+ L I L+ S + +L LD +TH+ K F
Sbjct: 272 EVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSL------IQSGKLNLDPIITHKYKGF 325
Query: 365 EEINSAFDLLIKGKCLRCVIW 385
++ AF+L+ GK + V +
Sbjct: 326 DKFEEAFELMRAGKTGKVVFF 346
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 135/365 (36%), Gaps = 36/365 (9%)
Query: 21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW---KMKDFPAVFPRILGHE 77
+ PG+ L ++ + P +EV +R +C SDV +W ++ +F P +LGHE
Sbjct: 12 VVHGPGD-LRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHE 70
Query: 78 AIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QT 136
A A C+ + NL + F +P P D
Sbjct: 71 ASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATP--PDDGNL 128
Query: 137 SRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT 196
RF + +F E +++ LS G+ A R
Sbjct: 129 CRFYKHNAAFCYKLPDNVTFEEGALIEP-----------------LSVGIH-----ACRR 166
Query: 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256
V +G V++ G G IG A+ GA +++ D+ + + K G +
Sbjct: 167 GGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKE 226
Query: 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316
+ +++ + + EC G + +Q R G G +++G+ GS+ + +
Sbjct: 227 SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGL---GSEXT--T 280
Query: 317 FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK 376
+LH+ I + G + + P+ + K + + VTH E+ AF+ K
Sbjct: 281 VPLLHAA-IREVDIKGVFRYCNTWPVAISXLASKSVNVKPLVTHRFPLEKALEAFETFKK 339
Query: 377 GKCLR 381
G L+
Sbjct: 340 GLGLK 344
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 130/330 (39%), Gaps = 42/330 (12%)
Query: 53 LCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXX-XXXXIPHFLADCTECVG 111
+CH+D+ DF +LGHE I + F C C
Sbjct: 38 VCHTDLHV-AAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEY 96
Query: 112 CRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171
C S C R+ + + G + V+ ++ VKV
Sbjct: 97 CVSGNETFC------------REVKNAGYSVDGGMAEEAIVVADYA----------VKVP 134
Query: 172 PTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRI 229
+ P A ++C GV+T A + + V+ G VIFG G +G LA+ + GA ++
Sbjct: 135 DGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KV 191
Query: 230 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 288
I VD+ +K + K+ G +NS GD + I +T G G C +A + E
Sbjct: 192 IAVDINQDKLNLAKKIGADVTINS---GDVNPVDEIKKITGGLGVQSAIVCA-VARIAFE 247
Query: 289 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
K GK + + V P ++++LS V+ G + GSL G + D+ +
Sbjct: 248 QAVASLKPMGKMVAVAV--PNTEMTLSVPTVVFDGVEVAGSLVG---TRLDLAEAFQFGA 302
Query: 349 DKELELDKFVTHEMKFEEINSAFDLLIKGK 378
+ ++ K + K EEIN D + GK
Sbjct: 303 EGKV---KPIVATRKLEEINDIIDEMKAGK 329
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 130/330 (39%), Gaps = 42/330 (12%)
Query: 53 LCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXX-XXXXIPHFLADCTECVG 111
+CH+D+ D+ +LGHE I + F C C
Sbjct: 38 VCHTDLHV-AAGDYGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEY 96
Query: 112 CRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171
C S C R+ + + G + V+ ++ VKV
Sbjct: 97 CVSGNETFC------------REVKNAGYSVDGGMAEEAIVVADYA----------VKVP 134
Query: 172 PTVPPNRACLLSC-GVSTGVGAAWRTANVEVGSTVVIFGLGSIG-LAVAEGARLCGATRI 229
+ P A ++C GV+T A + + V+ G VIFG G +G LA+ + GA ++
Sbjct: 135 DGLDPIEASSITCAGVTTY--KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGA-KV 191
Query: 230 IGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQE 288
I VD+ +K + K+ G +NS GD + I +T G G C +A + E
Sbjct: 192 IAVDINQDKLNLAKKIGADVIINS---GDVNPVDEIKKITGGLGVQSAIVCA-VARIAFE 247
Query: 289 AYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYM 348
K GK + + + P ++++LS V+ G + GSL G + D+ +
Sbjct: 248 QAVASLKPMGKMVAVAL--PNTEMTLSVPTVVFDGVEVAGSLVG---TRLDLAEAFQFGA 302
Query: 349 DKELELDKFVTHEMKFEEINSAFDLLIKGK 378
+ ++ K + K EEIN D + GK
Sbjct: 303 EGKV---KPIVATRKLEEINDIIDEMKAGK 329
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 134/371 (36%), Gaps = 54/371 (14%)
Query: 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXX 88
L I E + P++ EVRV++ +C SD ++ + A +PR++GHE
Sbjct: 32 LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 89 XXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148
+ C C C K N+C+ L +H
Sbjct: 92 VESARVGERVAVDPVVSCGHCYPCSIGKPNVCTT-------------------LAVLGVH 132
Query: 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLS--CGVSTGVGAAWRTANVEVGSTVV 206
+ FSEY V+ + K+ V A ++ + G T N TV+
Sbjct: 133 ---ADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTEN----DTVL 185
Query: 207 IFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC------GDK 259
++G G IGL + + + + +I D I E+ E K G +N+ +K
Sbjct: 186 VYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK 245
Query: 260 SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV 319
+ +I E V LAS + +++G S++
Sbjct: 246 GIKPTLIIDAACHPSILKEAVTLASPA-----------ARIVLMGFSSEPSEVIQQGI-- 292
Query: 320 LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL--LIKG 377
+GK L S+F + P+++ ++ +K +TH F+ + A L L +
Sbjct: 293 --TGKEL--SIFSSRLNANKFPVVIDWLSKGLIKPEKLITHTFDFQHVADAISLFELDQK 348
Query: 378 KCLRCVIWMGE 388
C + ++ E
Sbjct: 349 HCCKVLLTFSE 359
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 124/360 (34%), Gaps = 63/360 (17%)
Query: 30 VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHE--AIXXXXXXXX 87
V + VI + + EVRV+I + LC SD+ K+ +P LGHE
Sbjct: 14 VAESVIPEIKHQDEVRVKIASSGLCGSDLPRI-FKNGAHYYPITLGHEFSGYIDAVGSGV 72
Query: 88 XXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 147
+P L C C C + C+ + F S RD
Sbjct: 73 DDLHPGDAVACVP--LLPCFTCPECLKGFYSQCAKYDFIGSR---RD------------- 114
Query: 148 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVI 207
F+EY V+ +V + +P + ++ G+ A E V+I
Sbjct: 115 ------GGFAEYIVVKRKNVFALPTDMPIEDGAFIEP-ITVGLHAFHLAQGCE-NKNVII 166
Query: 208 FGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 267
G G+IGL + A GA + +D+ SEK + K FG + NS + ++ +
Sbjct: 167 IGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE 226
Query: 268 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327
+ L+ E G +T+ L V+ G L+ LH L
Sbjct: 227 LR------------FNQLILET-----AGVPQTVELAVEIAGPHAQLALVGTLHQDLHLT 269
Query: 328 GSLFGGLKAK-----------------SDIPILLKRYMDKELELDKFVTHEMKFEEINSA 370
+ FG + K + + +++L L+ + H FE A
Sbjct: 270 SATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQA 329
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 142/368 (38%), Gaps = 46/368 (12%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
RA G+PL + E+ V P +V +++ +CHSDV + ++D
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P LGHE + L C CR + +LC +
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDS------- 114
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST 188
PR F E +V V + L + V+ P L+C G++T
Sbjct: 115 --PRWLGINFDGAYAE----YVIVPHYKYMYKLRRLNAVEAAP---------LTCSGITT 159
Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIG--LAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
A R A+++ T+++ G G +AV + GAT IIGVDV E E KR G
Sbjct: 160 --YRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAKRAG 216
Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
+N+ +++I G D + + + Y GK +++G+
Sbjct: 217 ADYVINASM--QDPLAEIRRITESKGVDAVID-LNYSEKTLSVYPKALAKQGKYVMVGLF 273
Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 366
G+ L + + S +GSL G +SD +++ + + ++ +T MK EE
Sbjct: 274 --GADLHYHAPLITLSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEE 326
Query: 367 INSAFDLL 374
N A D L
Sbjct: 327 ANEAIDNL 334
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 137/381 (35%), Gaps = 57/381 (14%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA---VFPRIL 74
RA AP E L + + V P E+ VR+ S+C +D+ WK + P +
Sbjct: 2 RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61
Query: 75 GHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGC---RSKKGNLCSAFPFKISPWM 131
GHE + E VG R + G+ S +
Sbjct: 62 GHE-------------------------FSGVVEAVGPGVRRPQVGDHVSLESHIVCHAC 96
Query: 132 PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVG 191
P +T + I F+EY V+ A V+P P + V
Sbjct: 97 PACRTGNYHVCLNTQILGVDRDGGFAEYVVVP-AENAWVNPKDLPFEVAAILEPFGNAVH 155
Query: 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251
+ + V G +V+I G G IGL A R GA I+ D + + + V
Sbjct: 156 TVYAGSGVS-GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLV 213
Query: 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311
N ++ + +++ +T G + E G + + + G G+ +LG+ +
Sbjct: 214 NPL---EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPIR 269
Query: 312 LSLSSFEVLHSGKILMGSLFG-GLKAKSDIPILLKRYMD-------KELELDKFVTHEMK 363
L +G+++M + G+ + L + +M ++L +TH +
Sbjct: 270 FDL-------AGELVMRGITAFGIAGRR----LWQTWMQGTALVYSGRVDLSPLLTHRLP 318
Query: 364 FEEINSAFDLLIKGKCLRCVI 384
AF LL G+ ++ ++
Sbjct: 319 LSRYREAFGLLASGQAVKVIL 339
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 121/336 (36%), Gaps = 38/336 (11%)
Query: 43 EVRVRIICTSLCHSDVTFWKMKDF-PAVFP--RILGHEAIXXXXXXXXXXXXXXXXXXXI 99
EV V + T +C SDV FWK P + +LGHE+
Sbjct: 42 EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEY 159
C C C + + N C F +P +P + +V+ + +
Sbjct: 102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPG------------LLRRYVNHPAVWCH 149
Query: 160 TVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAE 219
+ ++++ N A L V+ A + A V +G V+I G G IGL
Sbjct: 150 KIGNMSY---------ENGAMLEPLSVAL---AGLQRAGVRLGDPVLICGAGPIGLITML 197
Query: 220 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN---CGDKSVSQIIIDMTDGGADYC 276
A+ GA ++ D+ + + K E V K ++S +I+
Sbjct: 198 CAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256
Query: 277 FECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336
EC G+ S + A + G GK V+GV + Q+ V L +
Sbjct: 257 LECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQIPFMRASVREV------DLQFQYRY 309
Query: 337 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 372
+ P ++ + ++L + VTH E+ AF+
Sbjct: 310 CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFE 345
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 93/243 (38%), Gaps = 35/243 (14%)
Query: 18 RAAIATAPGEPLVID--EVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRIL 74
RA + A G P V++ ++ V P EVRVR+ +L H DV K P + P +L
Sbjct: 2 RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61
Query: 75 GHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD 134
G + + + C C C + + NLC PR
Sbjct: 62 GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLC-----------PRY 110
Query: 135 QTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194
Q + GE H +++EY VL A++ P N + + + AW
Sbjct: 111 Q------ILGEHRH-----GTYAEYVVLPEANLA----PKPKNLSFEEAAAIPLTFLTAW 155
Query: 195 RTA----NVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249
+ V G V++ GS + +A + A+L GA R+I +K K G E
Sbjct: 156 QMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADE 214
Query: 250 FVN 252
VN
Sbjct: 215 TVN 217
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 141/368 (38%), Gaps = 46/368 (12%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
RA G+PL + E+ V P +V +++ +CHSDV + ++D
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P LGHE + C CR + +LC +
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDS------- 114
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST 188
PR F E +V V + L + V+ P L+C G++T
Sbjct: 115 --PRWLGINFDGAYAE----YVIVPHYKYMYKLRRLNAVEAAP---------LTCSGITT 159
Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIG--LAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
A R A+++ T+++ G G +AV + GAT IIGVDV E E KR G
Sbjct: 160 Y--RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAKRAG 216
Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
+N+ +++I G D + + + Y GK +++G+
Sbjct: 217 ADYVINASM--QDPLAEIRRITESKGVDAVID-LNYSEKTLSVYPKALAKQGKYVMVGLF 273
Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 366
G+ L + + S +GSL G +SD +++ + + ++ +T MK EE
Sbjct: 274 --GADLHYHAPLITLSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEE 326
Query: 367 INSAFDLL 374
N A D L
Sbjct: 327 ANEAIDNL 334
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 88/229 (38%), Gaps = 11/229 (4%)
Query: 156 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGL 215
SEY VL V ++ A L C T A ++ G VV+ G G + L
Sbjct: 144 LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVAL 203
Query: 216 AVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275
+ A+ GA I+ EK + G +N + V ++ D GAD+
Sbjct: 204 FGLQIAKATGAEVIV-TSSSREKLDRAFALGADHGIN--RLEEDWVERVYALTGDRGADH 260
Query: 276 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335
E G A L Q A G+ V+GV + G ++S +L ++ G G +
Sbjct: 261 ILEIAGGAGLGQSLKAVAPD--GRISVIGVLE-GFEVSGPVGPLLLKSPVVQGISVGHRR 317
Query: 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 384
A D+ + R L L + KF E+ A L +G + VI
Sbjct: 318 ALEDLVGAVDR-----LGLKPVIDXRYKFTEVPEALAHLDRGPFGKVVI 361
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 137/359 (38%), Gaps = 61/359 (16%)
Query: 43 EVRVRIICTSLCHSDV----TFWKMKDFPAVFPRILGHE-AIXXXXXXXXXXXXXXXXXX 97
+V + I+ +CHSD+ + WK ++P I GHE A
Sbjct: 31 DVLIDILYAGICHSDIHSAYSEWK----EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVV 86
Query: 98 XIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157
+ F+ C C C+ + C+ F D F D + +S
Sbjct: 87 GVGCFVNSCKACKPCKEHQEQFCTKVVFT------YDCLDSFHDNEPH-------MGGYS 133
Query: 158 EYTVLDIAHVVKVDPTVPPNR-ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG-- 214
V+D +V+ VD P + A LL G++T + + + V G+ V + G G +G
Sbjct: 134 NNIVVDENYVISVDKNAPLEKVAPLLCAGITT--YSPLKFSKVTKGTKVGVAGFGGLGSM 191
Query: 215 ---LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD 270
AVA GA + R K + GV F + K C ++
Sbjct: 192 AVKYAVAMGAEVSVFAR------NEHKKQDALSMGVKHFYTDPKQCKEE----------- 234
Query: 271 GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG-KILMGS 329
D+ + +++ Y G ++G+ LS F+ +H G + + GS
Sbjct: 235 --LDFIISTIPTHYDLKD-YLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGS 291
Query: 330 LFGGLKAKSD-IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386
L GG+K + + +K + E++L + ++I++A+ L GK R VI M
Sbjct: 292 LIGGIKETQEMVDFSIKHNIYPEIDL-------ILGKDIDTAYHNLTHGKAKFRYVIDM 343
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 141/368 (38%), Gaps = 46/368 (12%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
RA G+PL + E+ V P +V +++ +CHSDV + ++D
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 70 FPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP 129
P LGHE + C CR + +LC +
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDS------- 114
Query: 130 WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSC-GVST 188
PR F E +V V + L + V+ P L+C G++T
Sbjct: 115 --PRWLGINFDGAYAE----YVIVPHYKYMYKLRRLNAVEAAP---------LTCSGITT 159
Query: 189 GVGAAWRTANVEVGSTVVIFGLGSIG--LAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
A R A+++ T+++ G G +AV + GAT IIGVDV E E KR G
Sbjct: 160 Y--RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGAT-IIGVDVREEAVEAAKRAG 216
Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
+N+ +++I G D + + + Y GK +++G+
Sbjct: 217 ADYVINASM--QDPLAEIRRITESKGVDAVID-LNNSEKTLSVYPKALAKQGKYVMVGLF 273
Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEE 366
G+ L + + S +GSL G +SD +++ + + ++ +T MK EE
Sbjct: 274 --GADLHYHAPLITLSEIQFVGSLVGN---QSDFLGIMR--LAEAGKVKPMITKTMKLEE 326
Query: 367 INSAFDLL 374
N A D L
Sbjct: 327 ANEAIDNL 334
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 138/372 (37%), Gaps = 37/372 (9%)
Query: 9 KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA 68
K AG ++ +A A + +PL ++ P ++V++ I +CHSD+ + +
Sbjct: 17 KKAG--LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT 74
Query: 69 VFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLAD-CTECVGCRSKKGNLCSAFPFKI 127
V+P + GHE + + D C C C N C
Sbjct: 75 VYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD------ 128
Query: 128 SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187
M S D G T+ + E VL I H + V P LL G++
Sbjct: 129 --HMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAP----LLCAGIT 182
Query: 188 T-GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246
T W+ + V I GLG +G+ +A ++ K E K G
Sbjct: 183 TYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAM----GAHVVAFTTSEAKREAAKALG 238
Query: 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306
E VNS+N D+ + + D+ V + + ++ T+V
Sbjct: 239 ADEVVNSRN-ADEMAAHL------KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA 291
Query: 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRY-MDKELELDKFVTHEMKFE 365
P S F ++ + + GS+ GG+ ++ + + ++E+ ++ +
Sbjct: 292 TP--HKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEM-------IRAD 342
Query: 366 EINSAFDLLIKG 377
+IN A++ +++G
Sbjct: 343 QINEAYERMLRG 354
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 130/361 (36%), Gaps = 59/361 (16%)
Query: 43 EVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAI-XXXXXXXXXXXXXXXXXXXIPH 101
+VR +++ +CHSD+ K +++P + GHE + +
Sbjct: 43 DVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGC 102
Query: 102 FLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTV 161
+ C C C + N C P M S + D ++ +S + V
Sbjct: 103 LVGACHSCESCANDLENYC--------PKMILTYASIYHDGT-------ITYGGYSNHMV 147
Query: 162 LDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIG------- 214
+ ++++ +P + L C A + V S + FGL G
Sbjct: 148 ANERYIIRFPDNMPLDGGAPLLC------------AGITVYSPLKYFGLDEPGKHIGIVG 195
Query: 215 -----LAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 269
+ A+ G+ + S+K E K FG F+ S+ D+ Q
Sbjct: 196 LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSR---DQEQMQAAAGTL 252
Query: 270 DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329
DG D L L K GK I++G P L L +F ++ KI+ GS
Sbjct: 253 DGIIDTVSAVHPLLPLFG-----LLKSHGKLILVGA--PEKPLELPAFSLIAGRKIVAGS 305
Query: 330 LFGGLKAKSD-IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 387
GG+K + I K + ++E+ + + +N+A + L K R VI +G
Sbjct: 306 GIGGMKETQEMIDFAAKHNITADIEV-------ISTDYLNTAMERLAKNDVRYRFVIDVG 358
Query: 388 E 388
Sbjct: 359 N 359
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254
R + G VVI G G IGLA + GA+++I + + + K G ++
Sbjct: 207 RGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPT 266
Query: 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLV 286
++ + ++D T+G GA E G+ LV
Sbjct: 267 K---ENFVEAVLDYTNGLGAKLFLEATGVPQLV 296
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK--------MKDFPAV 69
RA G+PL + E+ V P +V +++ +CHSDV + ++D
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVK 61
Query: 70 FPRILGHE 77
P LGHE
Sbjct: 62 LPVTLGHE 69
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
ST GA+W+TA+ + S+V + GLG++G +A
Sbjct: 286 STPSGASWKTASAQPVSSVGVLGLGTMGRGIA 317
>pdb|1ZCJ|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Length = 463
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
ST GA+W+TA+ + S+V + GLG++G +A
Sbjct: 22 STPSGASWKTASAQPVSSVGVLGLGTMGRGIA 53
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
ST GA+W+TA+ + S+V + GLG++G +A
Sbjct: 301 STPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 187 STGVGAAWRTANVEVGSTVVIFGLGSIGLAVA 218
ST GA+W+TA+ + S+V + GLG++G +A
Sbjct: 301 STPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 1 MDIEKPSNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRI 48
M E + AG P +A++TAP L+++ +DP N+ ++RV+I
Sbjct: 184 MAAEATEWQKAGAPPPSGSAVSTAPAADLLVNP--LDPRNADKIRVKI 229
>pdb|2LPM|A Chain A, Chemical Shift And Structure Assignments For Sma0114
Length = 123
Score = 30.4 bits (67), Expect = 2.0, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317
D+S+ ++I+ D + E AS +QEA RKG ++ V+ G + S
Sbjct: 16 DESMIAMLIE--DTLCELGHEVAATASRMQEALDIARKGQFDIAIIDVNLDG-EPSYPVA 72
Query: 318 EVLHSGKI--LMGSLFG--GLKAK-SDIPILLKRYMDKELE 353
++L + + + +G GL + S+IP+L K ++D ELE
Sbjct: 73 DILAERNVPFIFATGYGSKGLDTRYSNIPLLTKPFLDSELE 113
>pdb|1LPA|B Chain B, Interfacial Activation Of The Lipase-Procolipase Complex
By Mixed Micelles Revealed By X-Ray Crystallography
pdb|1LPB|B Chain B, The 2.46 Angstroms Resolution Structure Of The Pancreatic
Lipase Colipase Complex Inhibited By A C11 Alkyl
Phosphonate
pdb|1N8S|A Chain A, Structure Of The Pancreatic Lipase-Colipase Complex
Length = 449
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 106 CTECVGCRSKKGNLC--SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157
C E +GC S + P I PW P+D +RF E ++F V++ S
Sbjct: 4 CYERLGCFSDDSPWSGITERPLHILPWSPKDVNTRFLLYTNENPNNFQEVAADS 57
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 150 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF- 208
+++ SF+EYTV+ A + P+V P LL G + + + + G V++
Sbjct: 93 YMAPGSFAEYTVVP-ASIATPVPSVKPEYLTLLVSGTTAYI-SLKELGGLSEGKKVLVTA 150
Query: 209 ---GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 265
G G + +++ A+ C +IG EK K G +N K + V ++
Sbjct: 151 AAGGTGQFAMQLSKKAK-C---HVIGTCSSDEKSAFLKSLGCDRPINYKT---EPVGTVL 203
Query: 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
G D +E VG A A K G+ IV+G
Sbjct: 204 KQEYPEGVDVVYESVGGAMFDLAVDALATK--GRLIVIG 240
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 150 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF- 208
+++ SF+EYTV+ A + P+V P LL G + + + + G V++
Sbjct: 114 YMAPGSFAEYTVVP-ASIATPVPSVKPEYLTLLVSGTTAYI-SLKELGGLSEGKKVLVTA 171
Query: 209 ---GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 265
G G + +++ A+ C +IG EK K G +N K + V ++
Sbjct: 172 AAGGTGQFAMQLSKKAK-C---HVIGTCSSDEKSAFLKSLGCDRPINYKT---EPVGTVL 224
Query: 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
G D +E VG A A K G+ IV+G
Sbjct: 225 KQEYPEGVDVVYESVGGAMFDLAVDALATK--GRLIVIG 261
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 150 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF- 208
+++ SF+EYTV+ A + P+V P LL G + + + + G V++
Sbjct: 122 YMAPGSFAEYTVVP-ASIATPVPSVKPEYLTLLVSGTTAYI-SLKELGGLSEGKKVLVTA 179
Query: 209 ---GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 265
G G + +++ A+ C +IG EK K G +N K + V ++
Sbjct: 180 AAGGTGQFAMQLSKKAK-C---HVIGTCSSDEKSAFLKSLGCDRPINYKT---EPVGTVL 232
Query: 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304
G D +E VG A A K G+ IV+G
Sbjct: 233 KQEYPEGVDVVYESVGGAMFDLAVDALATK--GRLIVIG 269
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 42 HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPH 101
H V ++++ T++C SD ++ + F +LGHE
Sbjct: 33 HAVILKVVSTNICGSDQHIYRGR-FIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVP 91
Query: 102 FLADCTECVGCRSKKGNLCS-----------AFPFKISPW 130
F C C C+ + ++C AF F + W
Sbjct: 92 FNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGW 131
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT--------RIIGV-------DVISEKF 239
+T + EV + VVI G G IG+ AE G R +GV DV++E+
Sbjct: 143 KTVDPEVNNVVVI-GSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282
E T + GD V +++ D AD VG+
Sbjct: 202 EANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGV 244
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 27.7 bits (60), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT--------RIIGV-------DVISEKF 239
+T + EV + VVI G G IG+ AE G R +GV DV++E+
Sbjct: 143 KTVDPEVNNVVVI-GSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282
E T + GD V +++ D AD VG+
Sbjct: 202 EANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGV 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,110,352
Number of Sequences: 62578
Number of extensions: 435911
Number of successful extensions: 1293
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1040
Number of HSP's gapped (non-prelim): 124
length of query: 388
length of database: 14,973,337
effective HSP length: 101
effective length of query: 287
effective length of database: 8,652,959
effective search space: 2483399233
effective search space used: 2483399233
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)