Query 016507
Match_columns 388
No_of_seqs 145 out of 1499
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 07:28:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016507.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016507hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.1E-67 2.4E-72 480.2 33.1 336 14-387 1-338 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 3.7E-67 8E-72 465.9 33.1 365 15-386 1-366 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 3.1E-65 6.7E-70 446.1 33.9 373 11-386 2-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.1E-61 2.4E-66 427.1 30.9 343 15-388 3-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.5E-58 3.2E-63 406.3 30.3 347 11-387 4-355 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 2.3E-55 5E-60 422.0 37.1 374 11-386 5-381 (381)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 2.5E-55 5.5E-60 420.5 37.2 362 17-384 1-370 (371)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 8.7E-55 1.9E-59 416.1 38.0 367 17-386 2-368 (368)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 5.5E-55 1.2E-59 416.4 36.4 355 16-385 1-357 (358)
10 cd08300 alcohol_DH_class_III c 100.0 2.5E-54 5.5E-59 413.2 38.2 367 16-385 2-368 (368)
11 cd08301 alcohol_DH_plants Plan 100.0 6.8E-54 1.5E-58 410.6 37.2 366 15-384 1-368 (369)
12 cd08239 THR_DH_like L-threonin 100.0 2.2E-53 4.9E-58 402.6 36.4 336 17-386 1-339 (339)
13 PLN02827 Alcohol dehydrogenase 100.0 8.6E-53 1.9E-57 403.2 37.6 365 15-387 11-377 (378)
14 PRK09880 L-idonate 5-dehydroge 100.0 2E-52 4.4E-57 396.4 35.7 338 14-386 2-343 (343)
15 COG1063 Tdh Threonine dehydrog 100.0 3.9E-52 8.6E-57 392.8 34.7 344 17-386 1-350 (350)
16 cd08277 liver_alcohol_DH_like 100.0 7.8E-52 1.7E-56 395.6 36.6 365 15-385 1-365 (365)
17 TIGR02819 fdhA_non_GSH formald 100.0 9.1E-52 2E-56 396.9 35.0 347 16-387 2-391 (393)
18 COG0604 Qor NADPH:quinone redu 100.0 2.6E-51 5.6E-56 382.3 30.3 316 17-386 1-326 (326)
19 PLN02586 probable cinnamyl alc 100.0 1.2E-50 2.6E-55 386.1 35.2 340 11-386 7-353 (360)
20 PRK10309 galactitol-1-phosphat 100.0 1.1E-49 2.3E-54 378.6 35.8 339 17-386 1-346 (347)
21 TIGR03201 dearomat_had 6-hydro 100.0 1.8E-49 3.8E-54 377.2 34.8 335 20-386 2-349 (349)
22 PLN02178 cinnamyl-alcohol dehy 100.0 2.8E-49 6.1E-54 377.9 35.2 332 19-386 9-348 (375)
23 cd08230 glucose_DH Glucose deh 100.0 3.1E-49 6.6E-54 376.5 34.0 335 17-386 1-355 (355)
24 TIGR02822 adh_fam_2 zinc-bindi 100.0 7.7E-49 1.7E-53 369.3 33.0 321 20-384 2-328 (329)
25 cd08231 MDR_TM0436_like Hypoth 100.0 4.9E-48 1.1E-52 369.2 36.6 349 18-386 2-361 (361)
26 cd08299 alcohol_DH_class_I_II_ 100.0 1.3E-47 2.8E-52 367.1 38.8 370 12-386 3-373 (373)
27 KOG1197 Predicted quinone oxid 100.0 4.9E-49 1.1E-53 334.3 25.1 319 11-387 3-331 (336)
28 cd08233 butanediol_DH_like (2R 100.0 1.1E-47 2.3E-52 365.4 36.1 335 17-384 1-350 (351)
29 PLN02514 cinnamyl-alcohol dehy 100.0 9.6E-48 2.1E-52 366.0 35.3 341 15-387 8-351 (357)
30 cd08278 benzyl_alcohol_DH Benz 100.0 4E-47 8.6E-52 363.1 36.2 364 15-385 1-365 (365)
31 cd08237 ribitol-5-phosphate_DH 100.0 4.5E-48 9.8E-53 366.0 29.1 323 15-387 1-340 (341)
32 cd05279 Zn_ADH1 Liver alcohol 100.0 6.2E-47 1.4E-51 361.7 36.8 362 17-385 1-365 (365)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 4E-46 8.6E-51 354.7 35.9 343 17-386 1-351 (351)
34 cd08238 sorbose_phosphate_red 100.0 4.3E-46 9.3E-51 360.8 35.1 333 15-387 1-369 (410)
35 PRK10083 putative oxidoreducta 100.0 1.5E-45 3.2E-50 349.1 35.3 335 17-388 1-339 (339)
36 cd08296 CAD_like Cinnamyl alco 100.0 2.6E-45 5.6E-50 346.6 34.9 331 17-385 1-333 (333)
37 cd08279 Zn_ADH_class_III Class 100.0 3.1E-44 6.7E-49 343.1 37.5 361 17-384 1-362 (363)
38 TIGR01202 bchC 2-desacetyl-2-h 100.0 3E-45 6.6E-50 341.9 29.1 303 16-385 1-308 (308)
39 cd08286 FDH_like_ADH2 formalde 100.0 5.3E-44 1.2E-48 339.3 35.8 338 17-386 1-345 (345)
40 cd08283 FDH_like_1 Glutathione 100.0 7.1E-44 1.5E-48 342.9 36.6 354 17-386 1-386 (386)
41 cd05284 arabinose_DH_like D-ar 100.0 1.3E-43 2.9E-48 335.9 35.0 333 17-386 1-340 (340)
42 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.9E-43 4.2E-48 336.1 35.1 335 17-384 1-350 (350)
43 cd05278 FDH_like Formaldehyde 100.0 2.2E-43 4.8E-48 335.2 34.3 341 17-386 1-347 (347)
44 KOG0025 Zn2+-binding dehydroge 100.0 1.1E-43 2.4E-48 307.0 26.9 320 12-387 15-353 (354)
45 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.1E-42 2.3E-47 330.4 36.1 340 17-385 1-344 (345)
46 cd08240 6_hydroxyhexanoate_dh_ 100.0 9.7E-43 2.1E-47 331.3 34.6 336 17-385 1-349 (350)
47 cd08291 ETR_like_1 2-enoyl thi 100.0 3.3E-43 7.2E-48 330.9 30.8 310 17-385 1-324 (324)
48 cd08287 FDH_like_ADH3 formalde 100.0 2E-42 4.3E-47 328.5 35.5 336 17-386 1-345 (345)
49 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.9E-42 4.1E-47 331.3 35.5 359 17-385 1-367 (367)
50 cd08246 crotonyl_coA_red croto 100.0 1.2E-42 2.6E-47 335.6 33.7 342 13-384 9-391 (393)
51 PRK05396 tdh L-threonine 3-deh 100.0 3.1E-42 6.7E-47 326.7 35.1 337 17-387 1-341 (341)
52 cd08282 PFDH_like Pseudomonas 100.0 4E-42 8.6E-47 329.8 36.1 347 17-386 1-375 (375)
53 cd08284 FDH_like_2 Glutathione 100.0 7.8E-42 1.7E-46 324.3 35.5 339 17-385 1-343 (344)
54 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.8E-41 3.8E-46 321.0 36.4 334 17-386 1-337 (337)
55 PRK13771 putative alcohol dehy 100.0 5.8E-42 1.3E-46 323.8 32.9 331 17-386 1-333 (334)
56 cd08235 iditol_2_DH_like L-idi 100.0 1.4E-41 3E-46 322.4 35.4 337 17-385 1-343 (343)
57 cd08265 Zn_ADH3 Alcohol dehydr 100.0 9.6E-42 2.1E-46 328.0 34.5 340 15-384 27-383 (384)
58 cd08242 MDR_like Medium chain 100.0 1E-41 2.3E-46 320.1 33.7 317 17-386 1-319 (319)
59 TIGR01751 crot-CoA-red crotony 100.0 1.1E-41 2.4E-46 329.1 34.2 345 13-387 4-388 (398)
60 PLN02702 L-idonate 5-dehydroge 100.0 3.3E-41 7.1E-46 322.4 37.0 339 15-385 16-363 (364)
61 cd05285 sorbitol_DH Sorbitol d 100.0 4.4E-41 9.4E-46 319.0 35.2 332 19-384 1-341 (343)
62 cd05283 CAD1 Cinnamyl alcohol 100.0 2.2E-41 4.8E-46 320.2 32.6 335 18-385 1-337 (337)
63 PRK09422 ethanol-active dehydr 100.0 5.9E-41 1.3E-45 317.5 35.2 334 17-387 1-337 (338)
64 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 5.4E-41 1.2E-45 317.5 34.8 334 17-386 1-338 (338)
65 PLN03154 putative allyl alcoho 100.0 2.7E-41 5.9E-46 320.3 32.7 319 11-388 3-347 (348)
66 cd08236 sugar_DH NAD(P)-depend 100.0 1E-40 2.3E-45 316.5 35.1 337 17-384 1-343 (343)
67 cd08262 Zn_ADH8 Alcohol dehydr 100.0 8.1E-41 1.8E-45 317.0 34.3 324 17-385 1-341 (341)
68 TIGR03366 HpnZ_proposed putati 100.0 5.6E-42 1.2E-46 315.7 25.0 270 73-367 1-280 (280)
69 cd08297 CAD3 Cinnamyl alcohol 100.0 2.6E-40 5.6E-45 313.5 35.5 335 17-386 1-341 (341)
70 cd08234 threonine_DH_like L-th 100.0 3.8E-40 8.2E-45 311.5 35.6 332 17-384 1-333 (334)
71 cd05281 TDH Threonine dehydrog 100.0 2.7E-40 5.9E-45 313.3 33.8 336 17-386 1-341 (341)
72 cd08292 ETR_like_2 2-enoyl thi 100.0 1.5E-40 3.2E-45 312.8 31.6 310 17-385 1-324 (324)
73 cd08232 idonate-5-DH L-idonate 100.0 5.1E-40 1.1E-44 311.3 33.7 331 21-386 2-339 (339)
74 cd08259 Zn_ADH5 Alcohol dehydr 100.0 7.9E-40 1.7E-44 308.7 34.8 330 17-385 1-332 (332)
75 cd08266 Zn_ADH_like1 Alcohol d 100.0 6.3E-40 1.4E-44 310.2 34.1 336 17-386 1-342 (342)
76 cd08295 double_bond_reductase_ 100.0 3.2E-40 7E-45 312.4 30.8 313 15-386 6-338 (338)
77 cd08274 MDR9 Medium chain dehy 100.0 5.6E-40 1.2E-44 312.3 32.0 324 17-386 1-350 (350)
78 cd08264 Zn_ADH_like2 Alcohol d 100.0 6E-40 1.3E-44 308.9 31.0 318 17-379 1-320 (325)
79 TIGR00692 tdh L-threonine 3-de 100.0 3.2E-39 6.9E-44 305.9 34.1 331 23-386 5-340 (340)
80 cd08245 CAD Cinnamyl alcohol d 100.0 4.1E-39 8.8E-44 303.9 32.7 328 18-384 1-330 (330)
81 cd08294 leukotriene_B4_DH_like 100.0 2.7E-39 5.8E-44 304.9 31.1 305 16-386 2-329 (329)
82 cd08293 PTGR2 Prostaglandin re 100.0 6.6E-39 1.4E-43 304.4 32.9 300 29-386 23-345 (345)
83 cd08298 CAD2 Cinnamyl alcohol 100.0 7.8E-39 1.7E-43 301.8 32.7 323 17-384 1-329 (329)
84 TIGR02825 B4_12hDH leukotriene 100.0 4.3E-39 9.3E-44 303.1 29.9 292 29-385 19-325 (325)
85 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.8E-38 6.1E-43 294.9 31.9 301 17-350 1-306 (306)
86 cd08290 ETR 2-enoyl thioester 100.0 2.4E-38 5.2E-43 300.0 30.2 313 17-386 1-341 (341)
87 PRK10754 quinone oxidoreductas 100.0 2.1E-38 4.6E-43 298.6 28.6 315 16-385 1-326 (327)
88 cd08244 MDR_enoyl_red Possible 100.0 1.5E-37 3.1E-42 292.4 32.8 313 17-386 1-324 (324)
89 TIGR02817 adh_fam_1 zinc-bindi 100.0 1E-37 2.2E-42 295.1 30.8 309 18-385 1-334 (336)
90 PTZ00354 alcohol dehydrogenase 100.0 2.1E-37 4.7E-42 292.4 31.6 314 16-387 1-329 (334)
91 cd08276 MDR7 Medium chain dehy 100.0 1.3E-36 2.8E-41 287.2 34.7 330 17-385 1-335 (336)
92 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.4E-36 3E-41 285.8 31.8 313 17-386 1-325 (325)
93 cd08250 Mgc45594_like Mgc45594 100.0 1.6E-36 3.4E-41 286.1 30.3 311 16-385 1-329 (329)
94 cd08249 enoyl_reductase_like e 100.0 1.7E-36 3.7E-41 287.0 29.7 312 17-386 1-339 (339)
95 cd08289 MDR_yhfp_like Yhfp put 100.0 4.3E-36 9.3E-41 282.7 31.5 315 17-386 1-326 (326)
96 KOG1198 Zinc-binding oxidoredu 100.0 7.1E-37 1.5E-41 285.3 25.2 302 29-388 20-347 (347)
97 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1E-35 2.2E-40 278.4 32.3 303 23-384 2-311 (312)
98 cd05282 ETR_like 2-enoyl thioe 100.0 7.3E-36 1.6E-40 280.7 30.6 299 29-385 14-323 (323)
99 cd08243 quinone_oxidoreductase 100.0 1.2E-35 2.6E-40 278.6 31.0 312 17-384 1-319 (320)
100 TIGR02823 oxido_YhdH putative 100.0 3.2E-35 7E-40 276.5 33.0 311 18-385 1-322 (323)
101 cd08270 MDR4 Medium chain dehy 100.0 1.3E-35 2.9E-40 276.7 29.2 298 17-386 1-305 (305)
102 cd08252 AL_MDR Arginate lyase 100.0 4.1E-35 8.9E-40 277.2 31.3 313 17-385 1-336 (336)
103 cd05276 p53_inducible_oxidored 100.0 2.6E-34 5.6E-39 269.2 30.8 310 17-384 1-323 (323)
104 cd08253 zeta_crystallin Zeta-c 100.0 3.9E-34 8.5E-39 268.4 31.6 316 17-386 1-325 (325)
105 cd05286 QOR2 Quinone oxidoredu 100.0 6.1E-34 1.3E-38 266.3 32.3 310 18-386 1-320 (320)
106 cd08288 MDR_yhdh Yhdh putative 100.0 8.5E-34 1.8E-38 266.9 32.1 313 17-386 1-324 (324)
107 cd08248 RTN4I1 Human Reticulon 100.0 1.6E-34 3.4E-39 274.9 27.0 310 17-385 1-350 (350)
108 cd08272 MDR6 Medium chain dehy 100.0 7.6E-34 1.7E-38 266.8 30.5 311 17-386 1-326 (326)
109 cd08271 MDR5 Medium chain dehy 100.0 5E-34 1.1E-38 268.1 28.9 310 17-386 1-325 (325)
110 COG2130 Putative NADP-dependen 100.0 6.8E-34 1.5E-38 248.9 27.4 299 29-388 27-340 (340)
111 cd08247 AST1_like AST1 is a cy 100.0 2.7E-33 6E-38 266.6 30.7 316 18-386 2-352 (352)
112 cd05288 PGDH Prostaglandin deh 100.0 1.8E-33 3.9E-38 265.2 29.2 306 17-384 2-329 (329)
113 cd08273 MDR8 Medium chain dehy 100.0 1.5E-33 3.2E-38 266.0 27.4 307 17-384 1-330 (331)
114 cd08268 MDR2 Medium chain dehy 100.0 9E-33 2E-37 259.6 32.3 316 17-385 1-327 (328)
115 cd05188 MDR Medium chain reduc 100.0 2.1E-33 4.5E-38 256.9 26.5 268 43-346 1-270 (271)
116 TIGR02824 quinone_pig3 putativ 100.0 7.5E-33 1.6E-37 259.8 30.5 311 17-385 1-324 (325)
117 cd08241 QOR1 Quinone oxidoredu 100.0 7.4E-32 1.6E-36 252.7 31.0 309 17-384 1-322 (323)
118 cd05289 MDR_like_2 alcohol deh 100.0 2.1E-32 4.5E-37 255.0 27.0 301 17-384 1-309 (309)
119 cd08251 polyketide_synthase po 100.0 4.9E-32 1.1E-36 251.9 29.2 292 36-384 2-303 (303)
120 cd08275 MDR3 Medium chain dehy 100.0 3.5E-31 7.6E-36 250.1 31.7 311 18-386 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 1.3E-30 2.8E-35 244.4 26.6 295 30-384 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.8E-30 3.9E-35 239.4 25.7 282 42-384 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 2.5E-30 5.5E-35 238.2 24.8 277 46-384 2-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 1E-27 2.2E-32 220.6 25.1 251 63-384 14-277 (277)
125 KOG1202 Animal-type fatty acid 100.0 5.1E-28 1.1E-32 240.4 16.8 292 29-386 1429-1741(2376)
126 KOG1196 Predicted NAD-dependen 100.0 6.1E-26 1.3E-30 198.4 26.0 293 33-387 28-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 1.6E-24 3.6E-29 170.2 7.5 108 41-170 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 9.8E-18 2.1E-22 136.1 13.1 129 212-349 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 3.3E-13 7.2E-18 128.4 16.9 176 190-387 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 5.8E-12 1.3E-16 122.9 14.0 156 199-359 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1.7E-12 3.6E-17 104.8 2.8 120 245-384 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 5.1E-07 1.1E-11 82.7 10.7 163 196-374 72-246 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 1.1E-06 2.4E-11 85.9 11.4 108 200-309 162-289 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.4 1.2E-08 2.7E-13 98.8 -4.4 163 73-284 89-252 (417)
135 PRK05476 S-adenosyl-L-homocyst 98.3 1.4E-05 3.1E-10 76.7 14.6 103 189-307 198-302 (425)
136 PRK08306 dipicolinate synthase 98.3 1.9E-05 4.1E-10 73.0 13.4 111 201-328 151-261 (296)
137 PRK00045 hemA glutamyl-tRNA re 98.1 7.4E-08 1.6E-12 93.7 -5.4 159 74-284 92-254 (423)
138 TIGR00936 ahcY adenosylhomocys 98.1 4.4E-05 9.6E-10 73.0 13.2 101 190-306 182-284 (406)
139 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1.1E-05 2.3E-10 75.4 7.7 108 165-285 139-251 (311)
140 PF11017 DUF2855: Protein of u 98.0 0.00013 2.7E-09 66.9 12.6 138 155-306 90-233 (314)
141 PLN02494 adenosylhomocysteinas 98.0 7.7E-05 1.7E-09 72.0 11.6 101 190-306 241-343 (477)
142 PRK00517 prmA ribosomal protei 98.0 0.00016 3.4E-09 65.4 12.8 129 155-306 78-215 (250)
143 TIGR02853 spore_dpaA dipicolin 97.8 0.0004 8.7E-09 63.9 13.1 96 201-309 150-245 (287)
144 COG2518 Pcm Protein-L-isoaspar 97.8 0.00011 2.4E-09 63.2 8.0 121 171-305 44-170 (209)
145 TIGR00518 alaDH alanine dehydr 97.7 0.00025 5.4E-09 67.8 10.8 98 201-307 166-270 (370)
146 PTZ00075 Adenosylhomocysteinas 97.7 0.00045 9.8E-09 67.0 11.5 100 191-306 242-343 (476)
147 PRK12771 putative glutamate sy 97.6 5.1E-05 1.1E-09 76.9 4.8 80 198-284 133-234 (564)
148 PRK08324 short chain dehydroge 97.6 0.00049 1.1E-08 71.4 11.9 137 155-306 386-559 (681)
149 PF01488 Shikimate_DH: Shikima 97.5 0.0004 8.6E-09 56.4 7.7 76 199-284 9-87 (135)
150 TIGR00406 prmA ribosomal prote 97.3 0.0017 3.7E-08 60.0 10.3 96 199-305 157-260 (288)
151 COG4221 Short-chain alcohol de 97.2 0.0018 3.8E-08 56.9 8.5 79 201-282 5-91 (246)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.0058 1.2E-07 54.4 11.9 102 201-306 4-137 (238)
153 COG3967 DltE Short-chain dehyd 97.2 0.002 4.3E-08 54.8 7.9 78 201-282 4-88 (245)
154 PRK13943 protein-L-isoaspartat 97.0 0.0078 1.7E-07 56.2 11.2 103 193-303 72-179 (322)
155 PRK00377 cbiT cobalt-precorrin 97.0 0.01 2.2E-07 51.5 11.2 102 195-303 34-144 (198)
156 TIGR00438 rrmJ cell division p 97.0 0.014 3E-07 50.2 11.9 101 196-304 27-146 (188)
157 PRK11705 cyclopropane fatty ac 97.0 0.0073 1.6E-07 58.0 10.9 113 181-304 147-267 (383)
158 COG1748 LYS9 Saccharopine dehy 96.9 0.012 2.6E-07 56.0 11.4 96 203-306 2-101 (389)
159 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0056 1.2E-07 52.2 8.4 90 200-305 34-128 (178)
160 COG0300 DltE Short-chain dehyd 96.8 0.008 1.7E-07 54.1 9.2 80 199-282 3-94 (265)
161 PF13460 NAD_binding_10: NADH( 96.8 0.021 4.5E-07 48.6 11.5 92 205-306 1-99 (183)
162 KOG1209 1-Acyl dihydroxyaceton 96.8 0.02 4.3E-07 49.2 10.7 112 201-314 6-148 (289)
163 PRK05993 short chain dehydroge 96.8 0.0085 1.8E-07 54.9 9.5 78 201-281 3-85 (277)
164 PRK05693 short chain dehydroge 96.8 0.0074 1.6E-07 55.1 8.8 77 203-282 2-82 (274)
165 COG2242 CobL Precorrin-6B meth 96.7 0.023 5E-07 48.0 10.6 104 195-306 28-137 (187)
166 PRK12742 oxidoreductase; Provi 96.7 0.035 7.6E-07 49.3 12.8 101 201-307 5-134 (237)
167 PRK14967 putative methyltransf 96.7 0.092 2E-06 46.5 15.1 99 195-304 30-159 (223)
168 COG2264 PrmA Ribosomal protein 96.7 0.031 6.7E-07 51.2 12.0 139 155-306 120-265 (300)
169 PRK04148 hypothetical protein; 96.7 0.034 7.4E-07 44.6 10.7 86 199-295 14-99 (134)
170 PRK13944 protein-L-isoaspartat 96.6 0.019 4.1E-07 50.2 9.9 101 193-303 64-172 (205)
171 PF01135 PCMT: Protein-L-isoas 96.6 0.0045 9.8E-08 54.1 5.9 113 180-303 53-171 (209)
172 PRK03369 murD UDP-N-acetylmura 96.6 0.01 2.2E-07 59.2 9.1 73 199-283 9-81 (488)
173 PRK08177 short chain dehydroge 96.6 0.014 3E-07 51.6 9.0 77 203-282 2-81 (225)
174 PRK13942 protein-L-isoaspartat 96.6 0.0077 1.7E-07 52.9 7.2 101 193-303 68-175 (212)
175 PF12847 Methyltransf_18: Meth 96.6 0.0091 2E-07 46.3 6.9 93 201-303 1-110 (112)
176 PF00670 AdoHcyase_NAD: S-aden 96.5 0.048 1E-06 45.2 11.2 109 193-321 13-123 (162)
177 PRK08017 oxidoreductase; Provi 96.5 0.0093 2E-07 53.7 7.8 77 203-282 3-84 (256)
178 cd01080 NAD_bind_m-THF_DH_Cycl 96.5 0.026 5.7E-07 47.4 9.8 97 179-306 21-118 (168)
179 PLN03209 translocon at the inn 96.5 0.035 7.6E-07 55.5 12.0 104 195-306 73-209 (576)
180 PRK07326 short chain dehydroge 96.5 0.043 9.2E-07 48.7 11.7 79 201-282 5-92 (237)
181 COG0686 Ald Alanine dehydrogen 96.5 0.015 3.2E-07 52.8 8.3 94 202-305 168-269 (371)
182 COG2910 Putative NADH-flavin r 96.5 0.011 2.4E-07 49.5 7.0 92 204-306 2-106 (211)
183 PRK13940 glutamyl-tRNA reducta 96.4 0.018 3.9E-07 55.8 9.4 80 196-285 175-255 (414)
184 COG1179 Dinucleotide-utilizing 96.4 0.052 1.1E-06 47.6 11.1 103 201-307 29-156 (263)
185 PF01262 AlaDh_PNT_C: Alanine 96.4 0.0086 1.9E-07 50.5 6.3 101 202-305 20-140 (168)
186 PRK06182 short chain dehydroge 96.4 0.016 3.5E-07 52.8 8.6 79 201-282 2-84 (273)
187 PRK06949 short chain dehydroge 96.4 0.019 4.1E-07 51.8 8.8 80 200-282 7-96 (258)
188 PRK07060 short chain dehydroge 96.4 0.024 5.2E-07 50.6 9.4 77 201-282 8-87 (245)
189 PRK07806 short chain dehydroge 96.3 0.055 1.2E-06 48.4 11.6 101 201-305 5-135 (248)
190 PF13241 NAD_binding_7: Putati 96.3 0.049 1.1E-06 41.8 9.6 93 201-311 6-98 (103)
191 PRK06139 short chain dehydroge 96.3 0.017 3.7E-07 54.4 8.5 79 201-282 6-94 (330)
192 PRK07109 short chain dehydroge 96.3 0.062 1.3E-06 50.7 12.2 79 201-282 7-95 (334)
193 PRK12829 short chain dehydroge 96.3 0.02 4.4E-07 51.7 8.5 84 197-283 6-97 (264)
194 PRK06057 short chain dehydroge 96.3 0.022 4.7E-07 51.4 8.6 79 201-282 6-89 (255)
195 TIGR02469 CbiT precorrin-6Y C5 96.3 0.085 1.8E-06 41.4 11.0 103 193-304 11-122 (124)
196 PRK12939 short chain dehydroge 96.2 0.07 1.5E-06 47.7 11.8 80 200-282 5-94 (250)
197 PRK06719 precorrin-2 dehydroge 96.2 0.047 1E-06 45.5 9.6 90 201-305 12-101 (157)
198 PRK08618 ornithine cyclodeamin 96.2 0.067 1.5E-06 50.3 11.8 94 200-307 125-224 (325)
199 PRK12809 putative oxidoreducta 96.2 0.025 5.5E-07 58.3 9.7 77 201-283 309-406 (639)
200 KOG1205 Predicted dehydrogenas 96.2 0.072 1.6E-06 48.5 11.4 111 201-314 11-159 (282)
201 TIGR01318 gltD_gamma_fam gluta 96.2 0.021 4.6E-07 56.5 8.8 78 201-284 140-238 (467)
202 PRK07502 cyclohexadienyl dehyd 96.2 0.037 8E-07 51.6 9.9 91 203-305 7-101 (307)
203 PRK14175 bifunctional 5,10-met 96.2 0.05 1.1E-06 49.7 10.1 94 181-306 137-232 (286)
204 PRK08265 short chain dehydroge 96.2 0.072 1.6E-06 48.2 11.4 79 201-282 5-90 (261)
205 PRK06718 precorrin-2 dehydroge 96.1 0.021 4.5E-07 49.7 7.4 92 201-306 9-102 (202)
206 cd05311 NAD_bind_2_malic_enz N 96.1 0.087 1.9E-06 46.7 11.5 92 200-304 23-128 (226)
207 PRK12549 shikimate 5-dehydroge 96.1 0.061 1.3E-06 49.5 10.9 44 200-243 125-168 (284)
208 PRK08261 fabG 3-ketoacyl-(acyl 96.1 0.068 1.5E-06 52.7 12.0 78 201-282 209-294 (450)
209 PRK06200 2,3-dihydroxy-2,3-dih 96.1 0.032 6.9E-07 50.6 8.8 79 201-282 5-90 (263)
210 PRK06841 short chain dehydroge 96.1 0.029 6.2E-07 50.5 8.4 79 201-282 14-99 (255)
211 PRK05872 short chain dehydroge 96.0 0.034 7.4E-07 51.5 8.8 79 201-282 8-95 (296)
212 PF03435 Saccharop_dh: Sacchar 96.0 0.052 1.1E-06 52.4 10.3 90 205-302 1-96 (386)
213 PRK07831 short chain dehydroge 96.0 0.041 9E-07 49.8 9.1 81 199-282 14-107 (262)
214 PRK00107 gidB 16S rRNA methylt 96.0 0.068 1.5E-06 45.9 9.8 97 198-304 42-145 (187)
215 COG2519 GCD14 tRNA(1-methylade 96.0 0.069 1.5E-06 47.3 9.8 105 193-305 86-196 (256)
216 PRK07825 short chain dehydroge 96.0 0.039 8.4E-07 50.3 8.8 78 202-282 5-88 (273)
217 TIGR00080 pimt protein-L-isoas 96.0 0.021 4.5E-07 50.3 6.7 101 193-303 69-176 (215)
218 TIGR02356 adenyl_thiF thiazole 96.0 0.075 1.6E-06 46.3 10.0 35 201-235 20-54 (202)
219 PRK07814 short chain dehydroge 95.9 0.041 9E-07 49.9 8.8 79 201-282 9-97 (263)
220 PRK15116 sulfur acceptor prote 95.9 0.18 4E-06 45.7 12.7 103 201-306 29-155 (268)
221 PRK07402 precorrin-6B methylas 95.9 0.22 4.7E-06 43.1 12.8 104 193-305 32-143 (196)
222 PRK05866 short chain dehydroge 95.9 0.048 1.1E-06 50.4 9.1 79 201-282 39-127 (293)
223 TIGR03325 BphB_TodD cis-2,3-di 95.9 0.04 8.6E-07 49.9 8.4 78 201-281 4-88 (262)
224 TIGR01832 kduD 2-deoxy-D-gluco 95.9 0.057 1.2E-06 48.3 9.3 79 201-282 4-90 (248)
225 PRK12828 short chain dehydroge 95.9 0.045 9.8E-07 48.5 8.6 79 201-282 6-92 (239)
226 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.051 1.1E-06 48.6 9.0 79 201-282 4-92 (253)
227 PRK07574 formate dehydrogenase 95.9 0.074 1.6E-06 51.0 10.3 89 201-304 191-284 (385)
228 PRK07231 fabG 3-ketoacyl-(acyl 95.9 0.047 1E-06 48.9 8.7 79 201-282 4-91 (251)
229 PRK06500 short chain dehydroge 95.9 0.052 1.1E-06 48.5 9.0 79 201-282 5-90 (249)
230 PRK00536 speE spermidine synth 95.8 0.037 8.1E-07 49.9 7.7 100 200-306 71-173 (262)
231 PF03446 NAD_binding_2: NAD bi 95.8 0.13 2.8E-06 43.1 10.6 87 204-305 3-95 (163)
232 PRK08261 fabG 3-ketoacyl-(acyl 95.8 0.023 5E-07 56.0 6.9 93 196-307 28-126 (450)
233 PRK06953 short chain dehydroge 95.8 0.07 1.5E-06 46.9 9.4 77 203-282 2-80 (222)
234 PRK07677 short chain dehydroge 95.8 0.05 1.1E-06 48.9 8.5 78 202-282 1-88 (252)
235 PRK06180 short chain dehydroge 95.8 0.054 1.2E-06 49.5 8.9 79 201-282 3-88 (277)
236 TIGR01470 cysG_Nterm siroheme 95.8 0.069 1.5E-06 46.6 9.0 94 201-306 8-102 (205)
237 PRK09291 short chain dehydroge 95.8 0.057 1.2E-06 48.6 8.8 73 202-281 2-82 (257)
238 PF02353 CMAS: Mycolic acid cy 95.8 0.012 2.6E-07 53.7 4.3 99 193-305 54-167 (273)
239 PF02670 DXP_reductoisom: 1-de 95.7 0.07 1.5E-06 42.5 8.1 98 205-305 1-121 (129)
240 PRK05867 short chain dehydroge 95.7 0.055 1.2E-06 48.7 8.7 79 201-282 8-96 (253)
241 PRK12769 putative oxidoreducta 95.7 0.048 1E-06 56.5 9.2 77 201-283 326-423 (654)
242 cd01065 NAD_bind_Shikimate_DH 95.7 0.067 1.4E-06 44.2 8.5 95 200-305 17-117 (155)
243 PRK06505 enoyl-(acyl carrier p 95.7 0.058 1.2E-06 49.3 8.8 79 201-282 6-95 (271)
244 PF06325 PrmA: Ribosomal prote 95.7 0.03 6.5E-07 51.5 6.8 135 155-307 119-262 (295)
245 PRK06128 oxidoreductase; Provi 95.7 0.15 3.2E-06 47.3 11.6 79 201-282 54-144 (300)
246 PRK06196 oxidoreductase; Provi 95.7 0.064 1.4E-06 50.1 9.2 79 201-282 25-109 (315)
247 PRK08339 short chain dehydroge 95.7 0.072 1.6E-06 48.4 9.2 79 201-282 7-95 (263)
248 PRK07533 enoyl-(acyl carrier p 95.6 0.067 1.5E-06 48.4 8.9 79 201-282 9-98 (258)
249 PRK06484 short chain dehydroge 95.6 0.17 3.7E-06 50.8 12.5 102 201-306 268-402 (520)
250 CHL00194 ycf39 Ycf39; Provisio 95.6 0.07 1.5E-06 49.9 9.1 94 204-306 2-111 (317)
251 PRK05717 oxidoreductase; Valid 95.6 0.072 1.6E-06 48.0 8.9 79 201-282 9-94 (255)
252 PRK05653 fabG 3-ketoacyl-(acyl 95.6 0.075 1.6E-06 47.2 8.9 79 201-282 4-92 (246)
253 cd00755 YgdL_like Family of ac 95.6 0.25 5.4E-06 43.9 11.9 101 202-305 11-135 (231)
254 PRK00258 aroE shikimate 5-dehy 95.6 0.076 1.6E-06 48.7 8.9 94 200-303 121-220 (278)
255 PLN03139 formate dehydrogenase 95.5 0.11 2.4E-06 49.8 10.2 46 201-247 198-243 (386)
256 PRK07478 short chain dehydroge 95.5 0.078 1.7E-06 47.7 8.9 79 201-282 5-93 (254)
257 PRK14027 quinate/shikimate deh 95.5 0.12 2.7E-06 47.4 10.1 44 200-243 125-168 (283)
258 PRK07340 ornithine cyclodeamin 95.5 0.066 1.4E-06 49.8 8.4 101 200-316 123-228 (304)
259 PRK13394 3-hydroxybutyrate deh 95.5 0.084 1.8E-06 47.6 9.0 79 201-282 6-94 (262)
260 cd01078 NAD_bind_H4MPT_DH NADP 95.5 0.13 2.9E-06 44.3 9.7 76 201-284 27-109 (194)
261 PRK07904 short chain dehydroge 95.5 0.11 2.4E-06 46.9 9.6 81 199-282 5-97 (253)
262 PRK08340 glucose-1-dehydrogena 95.5 0.083 1.8E-06 47.7 8.8 76 204-282 2-86 (259)
263 PRK07774 short chain dehydroge 95.5 0.09 2E-06 47.0 9.0 79 201-282 5-93 (250)
264 COG0169 AroE Shikimate 5-dehyd 95.5 0.037 8.1E-07 50.5 6.4 45 200-244 124-168 (283)
265 PRK07062 short chain dehydroge 95.5 0.079 1.7E-06 48.0 8.7 79 201-282 7-97 (265)
266 PRK07523 gluconate 5-dehydroge 95.5 0.088 1.9E-06 47.4 8.9 79 201-282 9-97 (255)
267 TIGR01809 Shik-DH-AROM shikima 95.4 0.06 1.3E-06 49.5 7.8 76 201-283 124-201 (282)
268 PF00899 ThiF: ThiF family; I 95.4 0.24 5.2E-06 39.9 10.5 35 202-236 2-36 (135)
269 PLN02780 ketoreductase/ oxidor 95.4 0.078 1.7E-06 49.8 8.6 80 201-282 52-142 (320)
270 PRK07576 short chain dehydroge 95.4 0.099 2.1E-06 47.4 9.1 78 201-281 8-95 (264)
271 COG4122 Predicted O-methyltran 95.4 0.24 5.3E-06 43.4 10.9 103 195-302 53-164 (219)
272 PRK06194 hypothetical protein; 95.4 0.092 2E-06 48.2 9.0 79 201-282 5-93 (287)
273 COG0031 CysK Cysteine synthase 95.4 0.45 9.7E-06 43.7 13.0 60 194-254 54-116 (300)
274 PRK05875 short chain dehydroge 95.4 0.094 2E-06 47.8 9.0 78 201-281 6-95 (276)
275 PRK12548 shikimate 5-dehydroge 95.4 0.13 2.8E-06 47.5 9.8 37 200-236 124-160 (289)
276 PRK08628 short chain dehydroge 95.4 0.095 2.1E-06 47.2 8.8 79 201-282 6-93 (258)
277 COG0373 HemA Glutamyl-tRNA red 95.4 0.14 3E-06 49.2 10.0 102 193-305 169-275 (414)
278 PRK05884 short chain dehydroge 95.3 0.11 2.4E-06 45.9 8.9 74 204-281 2-78 (223)
279 PLN02366 spermidine synthase 95.3 0.21 4.6E-06 46.4 11.1 105 199-305 89-207 (308)
280 cd01075 NAD_bind_Leu_Phe_Val_D 95.3 0.17 3.8E-06 43.9 9.9 82 200-295 26-108 (200)
281 PRK08643 acetoin reductase; Va 95.3 0.1 2.2E-06 47.0 8.8 78 202-282 2-89 (256)
282 TIGR03206 benzo_BadH 2-hydroxy 95.3 0.1 2.2E-06 46.6 8.9 78 201-281 2-89 (250)
283 cd01483 E1_enzyme_family Super 95.3 0.21 4.5E-06 40.7 9.8 32 204-235 1-32 (143)
284 PRK08213 gluconate 5-dehydroge 95.3 0.11 2.4E-06 46.8 9.0 79 201-282 11-99 (259)
285 PRK07035 short chain dehydroge 95.3 0.11 2.3E-06 46.7 8.9 79 201-282 7-95 (252)
286 PRK06198 short chain dehydroge 95.3 0.1 2.2E-06 47.0 8.8 81 200-282 4-94 (260)
287 PRK06172 short chain dehydroge 95.3 0.1 2.3E-06 46.8 8.8 79 201-282 6-94 (253)
288 PRK06603 enoyl-(acyl carrier p 95.3 0.11 2.3E-06 47.2 8.8 80 200-282 6-96 (260)
289 PRK11207 tellurite resistance 95.3 0.09 2E-06 45.5 7.9 100 194-304 23-134 (197)
290 PRK08594 enoyl-(acyl carrier p 95.3 0.28 6.1E-06 44.3 11.5 78 201-281 6-96 (257)
291 PRK07890 short chain dehydroge 95.2 0.12 2.7E-06 46.4 9.1 80 200-282 3-92 (258)
292 PRK06138 short chain dehydroge 95.2 0.11 2.4E-06 46.4 8.9 79 201-282 4-91 (252)
293 PRK06181 short chain dehydroge 95.2 0.12 2.6E-06 46.7 9.1 77 203-282 2-88 (263)
294 PRK12823 benD 1,6-dihydroxycyc 95.2 0.096 2.1E-06 47.2 8.4 79 201-282 7-94 (260)
295 PF02558 ApbA: Ketopantoate re 95.2 0.052 1.1E-06 44.7 6.1 95 205-305 1-102 (151)
296 PRK07063 short chain dehydroge 95.2 0.11 2.4E-06 46.8 8.8 79 201-282 6-96 (260)
297 PRK07454 short chain dehydroge 95.2 0.14 3E-06 45.6 9.3 79 201-282 5-93 (241)
298 PF03807 F420_oxidored: NADP o 95.2 0.16 3.5E-06 38.1 8.3 85 204-303 1-93 (96)
299 COG2230 Cfa Cyclopropane fatty 95.2 0.093 2E-06 47.7 7.9 107 189-309 60-181 (283)
300 PRK12367 short chain dehydroge 95.2 0.14 3.1E-06 45.9 9.3 73 201-282 13-89 (245)
301 TIGR02355 moeB molybdopterin s 95.2 0.19 4.1E-06 45.0 9.9 35 202-236 24-58 (240)
302 PRK09072 short chain dehydroge 95.2 0.14 3.1E-06 46.3 9.4 79 201-282 4-90 (263)
303 PF02254 TrkA_N: TrkA-N domain 95.2 0.35 7.5E-06 37.6 10.4 93 205-304 1-96 (116)
304 PRK08703 short chain dehydroge 95.2 0.12 2.6E-06 46.0 8.8 81 201-282 5-97 (239)
305 PRK12384 sorbitol-6-phosphate 95.2 0.11 2.4E-06 46.8 8.6 78 202-282 2-91 (259)
306 PRK06179 short chain dehydroge 95.1 0.058 1.3E-06 49.0 6.7 76 202-282 4-83 (270)
307 TIGR02354 thiF_fam2 thiamine b 95.1 0.071 1.5E-06 46.3 6.8 35 201-235 20-54 (200)
308 PRK05876 short chain dehydroge 95.1 0.13 2.8E-06 47.0 9.0 79 201-282 5-93 (275)
309 PRK06101 short chain dehydroge 95.1 0.14 3E-06 45.7 9.0 75 203-281 2-80 (240)
310 PRK08267 short chain dehydroge 95.1 0.15 3.3E-06 45.9 9.4 77 203-282 2-87 (260)
311 PRK08415 enoyl-(acyl carrier p 95.1 0.13 2.9E-06 47.0 9.0 102 201-306 4-145 (274)
312 PRK12475 thiamine/molybdopteri 95.1 0.18 4E-06 47.5 10.0 36 201-236 23-58 (338)
313 cd00757 ThiF_MoeB_HesA_family 95.1 0.31 6.8E-06 43.2 11.0 35 202-236 21-55 (228)
314 PRK06914 short chain dehydroge 95.1 0.13 2.8E-06 47.0 8.9 77 202-282 3-91 (280)
315 PLN00203 glutamyl-tRNA reducta 95.1 0.17 3.8E-06 50.4 10.2 74 201-284 265-341 (519)
316 PRK08159 enoyl-(acyl carrier p 95.1 0.14 3E-06 46.8 9.0 80 199-281 7-97 (272)
317 PRK08690 enoyl-(acyl carrier p 95.1 0.15 3.3E-06 46.2 9.2 80 200-282 4-94 (261)
318 PRK00811 spermidine synthase; 95.0 0.18 4E-06 46.3 9.7 96 200-304 75-191 (283)
319 PRK08263 short chain dehydroge 95.0 0.13 2.9E-06 46.9 8.8 78 202-282 3-87 (275)
320 PRK06483 dihydromonapterin red 95.0 0.17 3.7E-06 44.9 9.3 78 202-282 2-84 (236)
321 PRK15469 ghrA bifunctional gly 95.0 0.16 3.5E-06 47.4 9.3 88 201-305 135-227 (312)
322 PRK08264 short chain dehydroge 95.0 0.11 2.3E-06 46.2 8.0 75 201-282 5-83 (238)
323 PF13823 ADH_N_assoc: Alcohol 95.0 0.02 4.3E-07 30.6 1.9 22 17-39 1-22 (23)
324 PRK12481 2-deoxy-D-gluconate 3 95.0 0.14 3E-06 46.1 8.7 79 201-282 7-93 (251)
325 PRK06482 short chain dehydroge 95.0 0.14 3E-06 46.7 8.8 77 203-282 3-86 (276)
326 TIGR03215 ac_ald_DH_ac acetald 95.0 0.33 7.1E-06 44.5 11.0 86 204-301 3-92 (285)
327 PRK07067 sorbitol dehydrogenas 95.0 0.16 3.4E-06 45.8 9.1 79 201-282 5-90 (257)
328 PRK05854 short chain dehydroge 95.0 0.15 3.2E-06 47.7 9.2 79 201-282 13-103 (313)
329 PRK06114 short chain dehydroge 95.0 0.16 3.4E-06 45.8 9.0 79 201-282 7-96 (254)
330 PRK12429 3-hydroxybutyrate deh 95.0 0.15 3.2E-06 45.8 8.9 79 201-282 3-91 (258)
331 PF08704 GCD14: tRNA methyltra 95.0 0.065 1.4E-06 48.0 6.3 107 193-305 32-147 (247)
332 PRK08085 gluconate 5-dehydroge 95.0 0.17 3.7E-06 45.5 9.2 79 201-282 8-96 (254)
333 PRK08277 D-mannonate oxidoredu 95.0 0.15 3.2E-06 46.6 9.0 78 201-281 9-96 (278)
334 PRK08589 short chain dehydroge 95.0 0.14 3E-06 46.7 8.7 79 201-282 5-92 (272)
335 PRK06197 short chain dehydroge 95.0 0.15 3.3E-06 47.4 9.1 79 201-282 15-105 (306)
336 PRK06079 enoyl-(acyl carrier p 94.9 0.15 3.2E-06 46.0 8.7 79 201-282 6-93 (252)
337 PRK07832 short chain dehydroge 94.9 0.14 3E-06 46.6 8.7 76 204-282 2-88 (272)
338 PRK08762 molybdopterin biosynt 94.9 0.28 6E-06 47.2 11.0 35 201-235 134-168 (376)
339 PF01408 GFO_IDH_MocA: Oxidore 94.9 0.6 1.3E-05 36.5 11.3 86 204-303 2-91 (120)
340 PRK06125 short chain dehydroge 94.9 0.15 3.2E-06 46.0 8.7 77 201-282 6-91 (259)
341 TIGR00507 aroE shikimate 5-deh 94.9 0.23 5E-06 45.3 10.0 92 199-304 114-214 (270)
342 PRK07688 thiamine/molybdopteri 94.9 0.19 4.2E-06 47.4 9.7 36 201-236 23-58 (339)
343 PRK07024 short chain dehydroge 94.9 0.17 3.7E-06 45.6 9.1 78 202-282 2-88 (257)
344 PRK09186 flagellin modificatio 94.9 0.15 3.2E-06 45.8 8.7 78 201-281 3-92 (256)
345 PRK08644 thiamine biosynthesis 94.9 0.21 4.5E-06 43.8 9.2 35 201-235 27-61 (212)
346 PRK05690 molybdopterin biosynt 94.9 0.28 6.2E-06 44.0 10.2 36 201-236 31-66 (245)
347 PF00106 adh_short: short chai 94.9 0.13 2.8E-06 42.8 7.6 79 204-282 2-90 (167)
348 PRK12826 3-ketoacyl-(acyl-carr 94.8 0.16 3.4E-06 45.4 8.6 79 201-282 5-93 (251)
349 PRK08226 short chain dehydroge 94.8 0.17 3.7E-06 45.7 8.9 79 201-282 5-92 (263)
350 cd05312 NAD_bind_1_malic_enz N 94.8 0.9 1.9E-05 41.3 13.2 83 201-294 24-128 (279)
351 COG0569 TrkA K+ transport syst 94.8 0.26 5.6E-06 43.7 9.7 75 204-284 2-78 (225)
352 PF01113 DapB_N: Dihydrodipico 94.8 0.37 8E-06 38.3 9.8 91 204-306 2-99 (124)
353 PRK08862 short chain dehydroge 94.8 0.18 3.9E-06 44.7 8.8 78 201-281 4-92 (227)
354 PRK06141 ornithine cyclodeamin 94.8 0.31 6.7E-06 45.6 10.7 94 200-306 123-221 (314)
355 PRK07453 protochlorophyllide o 94.8 0.17 3.6E-06 47.5 9.0 78 201-281 5-92 (322)
356 PRK12937 short chain dehydroge 94.8 0.61 1.3E-05 41.4 12.4 79 201-282 4-93 (245)
357 COG2226 UbiE Methylase involve 94.8 0.6 1.3E-05 41.5 11.8 107 193-307 43-159 (238)
358 PLN02253 xanthoxin dehydrogena 94.8 0.15 3.3E-06 46.6 8.5 79 201-282 17-104 (280)
359 PRK08251 short chain dehydroge 94.8 0.19 4.2E-06 44.8 9.1 77 202-281 2-90 (248)
360 PRK09242 tropinone reductase; 94.8 0.19 4E-06 45.3 9.0 79 201-282 8-98 (257)
361 PRK07984 enoyl-(acyl carrier p 94.8 0.2 4.2E-06 45.5 9.1 78 201-281 5-93 (262)
362 PRK08300 acetaldehyde dehydrog 94.8 0.34 7.4E-06 44.6 10.6 92 203-303 5-100 (302)
363 PRK07856 short chain dehydroge 94.8 0.13 2.9E-06 46.1 8.0 77 201-282 5-85 (252)
364 PRK06398 aldose dehydrogenase; 94.7 0.11 2.3E-06 47.0 7.2 74 201-282 5-82 (258)
365 PRK07985 oxidoreductase; Provi 94.7 0.49 1.1E-05 43.7 11.8 102 201-306 48-187 (294)
366 PRK10538 malonic semialdehyde 94.7 0.17 3.8E-06 45.3 8.6 76 204-282 2-84 (248)
367 PRK13243 glyoxylate reductase; 94.7 0.3 6.6E-06 46.0 10.4 37 201-238 149-185 (333)
368 PRK08317 hypothetical protein; 94.7 0.41 8.9E-06 42.3 10.8 102 193-304 11-124 (241)
369 PRK00312 pcm protein-L-isoaspa 94.7 0.17 3.7E-06 44.3 8.1 111 180-304 59-175 (212)
370 COG2227 UbiG 2-polyprenyl-3-me 94.7 0.26 5.7E-06 43.4 9.0 97 200-305 58-162 (243)
371 PRK06720 hypothetical protein; 94.6 0.27 5.9E-06 41.4 9.0 38 201-239 15-53 (169)
372 PRK08993 2-deoxy-D-gluconate 3 94.6 0.23 4.9E-06 44.7 9.2 79 201-282 9-95 (253)
373 PRK07417 arogenate dehydrogena 94.6 0.22 4.8E-06 45.7 9.1 68 204-284 2-69 (279)
374 PRK07074 short chain dehydroge 94.6 0.22 4.7E-06 44.8 9.0 78 202-282 2-87 (257)
375 PRK14618 NAD(P)H-dependent gly 94.6 0.4 8.6E-06 45.1 11.0 94 204-305 6-105 (328)
376 TIGR01963 PHB_DH 3-hydroxybuty 94.6 0.2 4.2E-06 44.9 8.6 77 203-282 2-88 (255)
377 PRK08328 hypothetical protein; 94.6 0.31 6.8E-06 43.3 9.7 36 201-236 26-61 (231)
378 cd01487 E1_ThiF_like E1_ThiF_l 94.6 0.42 9E-06 40.5 10.0 33 204-236 1-33 (174)
379 cd01492 Aos1_SUMO Ubiquitin ac 94.6 0.32 6.9E-06 42.1 9.5 35 201-235 20-54 (197)
380 PLN02256 arogenate dehydrogena 94.5 0.61 1.3E-05 43.4 11.7 97 193-305 27-128 (304)
381 PRK12936 3-ketoacyl-(acyl-carr 94.5 0.24 5.2E-06 44.0 9.0 79 201-282 5-90 (245)
382 TIGR01505 tartro_sem_red 2-hyd 94.5 0.34 7.3E-06 44.8 10.1 70 204-287 1-70 (291)
383 PRK06935 2-deoxy-D-gluconate 3 94.5 0.24 5.1E-06 44.7 8.9 79 201-282 14-101 (258)
384 PRK06113 7-alpha-hydroxysteroi 94.5 0.23 5.1E-06 44.6 8.9 79 201-282 10-98 (255)
385 PRK08945 putative oxoacyl-(acy 94.5 0.25 5.4E-06 44.2 9.0 83 199-282 9-102 (247)
386 PRK07666 fabG 3-ketoacyl-(acyl 94.4 0.26 5.6E-06 43.8 9.0 79 201-282 6-94 (239)
387 PRK06849 hypothetical protein; 94.4 1.7 3.8E-05 41.9 15.3 93 201-295 3-99 (389)
388 PRK14192 bifunctional 5,10-met 94.4 0.33 7.1E-06 44.5 9.6 78 199-307 156-234 (283)
389 PRK07577 short chain dehydroge 94.4 0.16 3.5E-06 44.9 7.6 74 201-282 2-78 (234)
390 PRK06124 gluconate 5-dehydroge 94.4 0.26 5.7E-06 44.3 9.0 79 201-282 10-98 (256)
391 PRK14194 bifunctional 5,10-met 94.4 0.4 8.6E-06 44.1 10.1 95 180-306 137-233 (301)
392 KOG1201 Hydroxysteroid 17-beta 94.4 0.26 5.6E-06 44.8 8.7 78 201-282 37-124 (300)
393 PRK05562 precorrin-2 dehydroge 94.4 0.27 5.8E-06 43.3 8.5 91 201-305 24-117 (223)
394 PRK06463 fabG 3-ketoacyl-(acyl 94.3 0.25 5.4E-06 44.4 8.7 79 201-282 6-89 (255)
395 PRK01438 murD UDP-N-acetylmura 94.3 0.24 5.2E-06 49.3 9.4 70 201-283 15-89 (480)
396 KOG1014 17 beta-hydroxysteroid 94.3 0.33 7.2E-06 44.4 9.2 79 201-283 48-137 (312)
397 PF05368 NmrA: NmrA-like famil 94.3 0.3 6.5E-06 43.3 9.1 70 205-281 1-73 (233)
398 PRK06484 short chain dehydroge 94.3 0.19 4.1E-06 50.5 8.7 79 201-282 4-89 (520)
399 PLN03075 nicotianamine synthas 94.3 0.34 7.4E-06 44.5 9.4 98 200-303 122-232 (296)
400 PF02719 Polysacc_synt_2: Poly 94.3 0.2 4.4E-06 45.8 7.9 75 205-282 1-87 (293)
401 TIGR02622 CDP_4_6_dhtase CDP-g 94.3 0.19 4.2E-06 47.6 8.2 75 201-282 3-85 (349)
402 PLN02657 3,8-divinyl protochlo 94.3 0.24 5.2E-06 47.8 9.0 105 198-306 56-183 (390)
403 PRK06077 fabG 3-ketoacyl-(acyl 94.3 0.86 1.9E-05 40.6 12.1 103 201-307 5-143 (252)
404 PRK14189 bifunctional 5,10-met 94.3 0.37 8.1E-06 44.0 9.5 94 181-306 137-232 (285)
405 PLN02928 oxidoreductase family 94.3 0.32 6.9E-06 46.2 9.5 96 201-305 158-263 (347)
406 COG0673 MviM Predicted dehydro 94.3 1.3 2.9E-05 41.6 13.9 130 204-352 5-145 (342)
407 PRK12550 shikimate 5-dehydroge 94.3 0.2 4.2E-06 45.8 7.8 71 197-282 117-188 (272)
408 PRK07791 short chain dehydroge 94.3 0.34 7.4E-06 44.5 9.6 36 200-236 4-40 (286)
409 PRK08278 short chain dehydroge 94.2 0.25 5.5E-06 45.0 8.6 36 201-237 5-41 (273)
410 PRK11559 garR tartronate semia 94.2 0.46 1E-05 43.9 10.5 70 204-287 4-73 (296)
411 PRK04457 spermidine synthase; 94.2 0.53 1.1E-05 42.8 10.6 95 200-303 65-176 (262)
412 PRK12743 oxidoreductase; Provi 94.2 0.29 6.4E-06 44.0 9.0 78 202-282 2-90 (256)
413 PRK06940 short chain dehydroge 94.2 0.28 6.1E-06 44.8 8.9 77 202-282 2-86 (275)
414 PRK07097 gluconate 5-dehydroge 94.2 0.31 6.7E-06 44.1 9.1 79 201-282 9-97 (265)
415 PRK10669 putative cation:proto 94.2 0.36 7.8E-06 49.0 10.3 76 203-284 418-493 (558)
416 PLN02781 Probable caffeoyl-CoA 94.2 0.49 1.1E-05 42.2 10.0 105 193-302 60-176 (234)
417 PF01370 Epimerase: NAD depend 94.1 0.28 6E-06 43.3 8.5 72 205-282 1-75 (236)
418 PRK07102 short chain dehydroge 94.1 0.4 8.6E-06 42.7 9.5 76 203-282 2-86 (243)
419 PRK01683 trans-aconitate 2-met 94.1 0.66 1.4E-05 41.9 11.0 99 193-303 23-129 (258)
420 PRK08303 short chain dehydroge 94.1 0.29 6.4E-06 45.5 8.8 34 201-235 7-41 (305)
421 PRK14191 bifunctional 5,10-met 94.1 0.47 1E-05 43.4 9.7 95 180-306 135-231 (285)
422 PLN00016 RNA-binding protein; 94.1 0.51 1.1E-05 45.4 10.7 95 202-305 52-165 (378)
423 PRK07792 fabG 3-ketoacyl-(acyl 94.1 0.41 9E-06 44.5 9.8 81 201-282 11-99 (306)
424 cd05211 NAD_bind_Glu_Leu_Phe_V 94.1 0.32 6.8E-06 42.8 8.4 88 200-293 21-118 (217)
425 PRK01581 speE spermidine synth 94.1 1 2.2E-05 42.6 12.2 104 199-305 148-269 (374)
426 PRK10792 bifunctional 5,10-met 94.0 0.45 9.8E-06 43.4 9.5 94 181-306 138-233 (285)
427 PRK05650 short chain dehydroge 94.0 0.29 6.3E-06 44.4 8.5 76 204-282 2-87 (270)
428 TIGR00563 rsmB ribosomal RNA s 94.0 0.56 1.2E-05 45.9 10.9 105 194-306 231-370 (426)
429 TIGR00477 tehB tellurite resis 94.0 0.34 7.3E-06 41.9 8.4 100 193-304 22-133 (195)
430 PLN00141 Tic62-NAD(P)-related 94.0 0.29 6.2E-06 44.0 8.3 100 201-306 16-133 (251)
431 COG3288 PntA NAD/NADP transhyd 94.0 0.27 5.9E-06 44.7 7.8 132 197-330 159-308 (356)
432 PRK08219 short chain dehydroge 93.9 0.25 5.5E-06 43.3 7.7 72 203-282 4-81 (227)
433 KOG0725 Reductases with broad 93.9 0.28 6.1E-06 44.7 8.1 82 200-282 6-99 (270)
434 PLN02476 O-methyltransferase 93.9 0.73 1.6E-05 42.0 10.6 105 193-302 110-226 (278)
435 PF01210 NAD_Gly3P_dh_N: NAD-d 93.9 0.51 1.1E-05 39.2 9.0 85 204-295 1-91 (157)
436 PRK03562 glutathione-regulated 93.9 0.43 9.4E-06 49.0 10.2 78 202-285 400-477 (621)
437 PRK08287 cobalt-precorrin-6Y C 93.8 1.1 2.4E-05 38.2 11.4 99 193-303 23-130 (187)
438 COG0421 SpeE Spermidine syntha 93.8 0.86 1.9E-05 41.7 11.1 100 203-305 78-191 (282)
439 COG2084 MmsB 3-hydroxyisobutyr 93.8 0.64 1.4E-05 42.5 10.2 73 204-290 2-75 (286)
440 PRK07775 short chain dehydroge 93.8 0.39 8.4E-06 43.8 9.0 79 201-282 9-97 (274)
441 PRK06523 short chain dehydroge 93.8 0.26 5.7E-06 44.3 7.8 75 201-281 8-86 (260)
442 PRK11036 putative S-adenosyl-L 93.8 0.47 1E-05 42.9 9.3 94 200-304 43-149 (255)
443 PRK05597 molybdopterin biosynt 93.7 0.74 1.6E-05 43.8 10.9 36 201-236 27-62 (355)
444 KOG1502 Flavonol reductase/cin 93.7 0.43 9.4E-06 44.3 8.9 75 201-281 5-87 (327)
445 PF10727 Rossmann-like: Rossma 93.7 0.24 5.3E-06 39.5 6.4 78 203-295 11-90 (127)
446 PRK06701 short chain dehydroge 93.7 0.41 8.8E-06 44.1 9.0 82 198-282 42-134 (290)
447 COG1052 LdhA Lactate dehydroge 93.7 0.45 9.8E-06 44.5 9.2 89 200-305 144-237 (324)
448 PRK14106 murD UDP-N-acetylmura 93.7 0.38 8.2E-06 47.4 9.3 71 201-283 4-79 (450)
449 PRK14188 bifunctional 5,10-met 93.7 0.75 1.6E-05 42.4 10.4 95 180-307 136-233 (296)
450 TIGR03840 TMPT_Se_Te thiopurin 93.7 1.1 2.5E-05 39.2 11.2 104 199-306 32-154 (213)
451 PRK06997 enoyl-(acyl carrier p 93.7 0.37 7.9E-06 43.6 8.4 79 201-282 5-94 (260)
452 PRK05447 1-deoxy-D-xylulose 5- 93.7 0.52 1.1E-05 44.9 9.5 100 203-305 2-122 (385)
453 PRK10258 biotin biosynthesis p 93.6 2.8 6E-05 37.6 14.1 98 195-304 36-140 (251)
454 TIGR01532 E4PD_g-proteo D-eryt 93.6 0.68 1.5E-05 43.4 10.2 99 204-306 1-122 (325)
455 KOG1252 Cystathionine beta-syn 93.6 0.67 1.5E-05 42.8 9.8 57 194-251 95-155 (362)
456 PRK06522 2-dehydropantoate 2-r 93.6 0.27 5.9E-06 45.5 7.7 95 204-304 2-100 (304)
457 TIGR02992 ectoine_eutC ectoine 93.6 1 2.3E-05 42.3 11.5 94 200-306 127-226 (326)
458 PRK05565 fabG 3-ketoacyl-(acyl 93.5 0.43 9.4E-06 42.4 8.7 78 202-282 5-93 (247)
459 PRK05557 fabG 3-ketoacyl-(acyl 93.5 0.48 1E-05 42.0 9.0 79 201-282 4-93 (248)
460 PRK14903 16S rRNA methyltransf 93.5 1.4 3.1E-05 43.1 12.8 103 195-306 231-368 (431)
461 TIGR02371 ala_DH_arch alanine 93.5 0.63 1.4E-05 43.7 9.9 95 200-307 126-225 (325)
462 PRK08063 enoyl-(acyl carrier p 93.5 0.44 9.4E-06 42.5 8.7 79 201-282 3-92 (250)
463 PRK07424 bifunctional sterol d 93.5 0.44 9.6E-06 46.1 9.1 74 201-282 177-255 (406)
464 PRK04266 fibrillarin; Provisio 93.5 1.7 3.6E-05 38.5 12.0 101 195-303 66-175 (226)
465 PRK03659 glutathione-regulated 93.5 0.54 1.2E-05 48.1 10.1 95 203-304 401-498 (601)
466 PLN02986 cinnamyl-alcohol dehy 93.4 0.54 1.2E-05 43.9 9.4 38 201-239 4-42 (322)
467 TIGR01472 gmd GDP-mannose 4,6- 93.4 0.3 6.4E-06 46.2 7.7 34 203-237 1-35 (343)
468 PRK05708 2-dehydropantoate 2-r 93.4 0.3 6.5E-06 45.4 7.6 94 204-305 4-105 (305)
469 PRK13984 putative oxidoreducta 93.4 0.37 8.1E-06 49.4 8.9 78 199-282 280-378 (604)
470 PRK06171 sorbitol-6-phosphate 93.4 0.28 6E-06 44.4 7.2 76 201-282 8-87 (266)
471 PRK12938 acetyacetyl-CoA reduc 93.4 0.28 6.2E-06 43.7 7.2 79 201-282 2-91 (246)
472 PRK08655 prephenate dehydrogen 93.4 0.72 1.6E-05 45.2 10.4 43 204-247 2-46 (437)
473 PRK09135 pteridine reductase; 93.3 0.51 1.1E-05 41.9 8.8 35 201-236 5-40 (249)
474 PLN02735 carbamoyl-phosphate s 93.3 1.2 2.7E-05 48.8 13.0 97 186-290 7-116 (1102)
475 PRK05600 thiamine biosynthesis 93.3 0.67 1.5E-05 44.3 9.8 36 201-236 40-75 (370)
476 TIGR00715 precor6x_red precorr 93.3 0.28 6.2E-06 44.2 6.9 73 204-282 2-75 (256)
477 PRK08416 7-alpha-hydroxysteroi 93.3 0.57 1.2E-05 42.2 9.1 78 201-281 7-96 (260)
478 PRK13403 ketol-acid reductoiso 93.3 1.1 2.4E-05 41.7 10.7 88 200-304 14-105 (335)
479 PLN02823 spermine synthase 93.3 0.79 1.7E-05 43.2 10.1 101 201-304 103-220 (336)
480 PLN02653 GDP-mannose 4,6-dehyd 93.2 0.26 5.6E-06 46.5 7.0 35 201-236 5-40 (340)
481 TIGR00138 gidB 16S rRNA methyl 93.2 0.47 1E-05 40.5 7.9 92 201-303 42-141 (181)
482 COG1648 CysG Siroheme synthase 93.2 0.56 1.2E-05 40.9 8.5 94 201-307 11-106 (210)
483 PRK12480 D-lactate dehydrogena 93.2 0.87 1.9E-05 42.9 10.3 86 201-305 145-235 (330)
484 KOG2018 Predicted dinucleotide 93.2 0.46 9.9E-06 43.3 7.9 40 197-236 69-108 (430)
485 PLN02589 caffeoyl-CoA O-methyl 93.2 0.95 2.1E-05 40.6 10.0 102 194-301 72-187 (247)
486 PRK08936 glucose-1-dehydrogena 93.2 0.59 1.3E-05 42.1 9.0 79 201-282 6-95 (261)
487 TIGR02415 23BDH acetoin reduct 93.2 0.55 1.2E-05 42.0 8.8 76 204-282 2-87 (254)
488 PLN02244 tocopherol O-methyltr 93.2 0.34 7.5E-06 45.8 7.6 95 200-305 117-224 (340)
489 smart00846 Gp_dh_N Glyceraldeh 93.0 1.8 3.9E-05 35.6 10.7 99 204-306 2-120 (149)
490 PRK14103 trans-aconitate 2-met 93.0 1.2 2.7E-05 40.1 10.9 98 193-303 21-125 (255)
491 PLN02896 cinnamyl-alcohol dehy 93.0 0.71 1.5E-05 43.8 9.7 41 199-240 7-48 (353)
492 TIGR00417 speE spermidine synt 93.0 0.94 2E-05 41.3 10.0 103 200-305 71-187 (270)
493 PRK06046 alanine dehydrogenase 93.0 1.2 2.5E-05 42.0 10.9 94 200-307 127-226 (326)
494 PRK08220 2,3-dihydroxybenzoate 93.0 0.48 1E-05 42.3 8.1 74 201-282 7-86 (252)
495 TIGR01327 PGDH D-3-phosphoglyc 93.0 0.77 1.7E-05 46.2 10.1 34 201-235 137-170 (525)
496 PRK06932 glycerate dehydrogena 92.9 0.52 1.1E-05 44.1 8.3 84 201-305 146-234 (314)
497 PLN02819 lysine-ketoglutarate 92.9 1.3 2.8E-05 47.9 12.1 94 202-303 569-678 (1042)
498 PRK12814 putative NADPH-depend 92.9 0.51 1.1E-05 48.9 9.0 77 201-283 192-289 (652)
499 PRK06436 glycerate dehydrogena 92.9 0.56 1.2E-05 43.5 8.4 35 201-236 121-155 (303)
500 TIGR02197 heptose_epim ADP-L-g 92.9 0.33 7.1E-06 45.0 7.1 73 205-281 1-75 (314)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.1e-67 Score=480.19 Aligned_cols=336 Identities=29% Similarity=0.465 Sum_probs=309.7
Q ss_pred CcceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCC
Q 016507 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 14 ~~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
+++|||+++.++++|+++.+++.|+|+++||+|||+|||+|++|++.++|..+...+|.+||||++|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCEEee-cCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 016507 94 EGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (388)
Q Consensus 94 vGd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~ 172 (388)
+||||.+ ++..+|+.|.+|++|++++|++... .|++.+| +||||+++++++++++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCC
Confidence 9999988 8899999999999999999999776 7888887 999999999999999999
Q ss_pred CCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 173 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
++++++||.+.|+..|+|.++ +..+++||++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999976 55999999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
.++ .+..+.+++ .+|++||+++ ...+..+++.|+++ |+++.+|.........++.+.++.+++++.|+..+
T Consensus 217 ~~~---~~~~~~~~~----~~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g 287 (339)
T COG1064 217 SSD---SDALEAVKE----IADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVG 287 (339)
T ss_pred cCC---chhhHHhHh----hCcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecC
Confidence 776 666666665 3999999999 87799999999998 99999998542344568888899999999999877
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEeeC
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 387 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~~ 387 (388)
+ +.++++++++..+|++.+. +.+.++++|+++|++.|++++. +|+||.+.
T Consensus 288 ~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 288 T---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred C---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 6 4799999999999976664 5579999999999999999886 59999875
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.7e-67 Score=465.94 Aligned_cols=365 Identities=45% Similarity=0.786 Sum_probs=349.4
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
|++||.+..++++||+++++.+++|+++|||||+.|+|+|++|+...+|.+|.. +|.++|||++|+|++||++|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 578999999999999999999999999999999999999999999999998876 9999999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+..++..|++|.+|++|+.++|.........|...+|..|++ .++.+.++.++.++|++|.++++..+++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999999999999999999999999998887777888899999999 899999999999999999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
+++.++++.|...|.+.++...+++++|++|.|.|-|.+|++++|-|+..|+.+|++++.+++|++++++||+++++|.+
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCc-cHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecC
Q 016507 255 NCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (388)
Q Consensus 255 ~~~~~-~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (388)
+ . +..+.+.++|++++|++|||+|....++.++.+..+ ||+.+.+|.......+++++.+++.. ..|.|++++.
T Consensus 239 ~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~ 313 (366)
T COG1062 239 E---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGG 313 (366)
T ss_pred h---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeecc-ceEEEEeecC
Confidence 7 4 699999999999999999999999999999999999 59999999988888888999998885 9999999998
Q ss_pred CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 334 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
-..+.+++++++++++|+++++++++++++|+|+++||+.|.+++..|.||.+
T Consensus 314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred CccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 88889999999999999999999999999999999999999999999988864
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-65 Score=446.12 Aligned_cols=373 Identities=55% Similarity=0.972 Sum_probs=354.4
Q ss_pred CCCCcceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCC
Q 016507 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD 90 (388)
Q Consensus 11 ~~~~~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~ 90 (388)
+.++.+|||.+..++++||.++++.+++|+.+||+||++|+++|++|...++|..+...||.++|||++|+|+++|++|+
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 45788999999999999999999999999999999999999999999999999987788999999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEE
Q 016507 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (388)
Q Consensus 91 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~ 169 (388)
.+++||+|+..+...|+.|.+|+++..|.|.........+.+ .||..||+ -+|.+++++.+..+|+||.+++...+.+
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEe
Confidence 999999999999999999999999999999998887655555 59999999 8899999999999999999999999999
Q ss_pred cCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 170 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
+++..+++.++++.|...|+|.+++..+++++|++|.|.|-|++|+++++-||+.|+.+||++|.+++|.+.++++|+++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 016507 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (388)
Q Consensus 250 v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (388)
.+|+.+. .....+.+++.|++|+|+-|||+|....+.+++.+...+||.-+.+|.....+.+++.++.++. +..+.|+
T Consensus 241 ~iNp~d~-~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs 318 (375)
T KOG0022|consen 241 FINPKDL-KKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGS 318 (375)
T ss_pred ecChhhc-cccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEE
Confidence 9998852 2358899999999999999999999999999999999999999999998888888999888877 9999999
Q ss_pred eecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 330 LFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
.++.++.+.+++.+++.+.+++++++.+|+|++||+++++||+.|.++...|.||.+
T Consensus 319 ~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 319 AFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred ecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999998864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-61 Score=427.14 Aligned_cols=343 Identities=26% Similarity=0.452 Sum_probs=303.6
Q ss_pred cceeeeeecCCCCCeEEEEeecCCC-CCCeEEEEEceeccCcccccccccCCCC---CCCCcccccceeEEEEEecCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVD 90 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~Vv~vG~~v~ 90 (388)
.+|+|+++.++++ ++++++|.|++ .|+||+|++.++|||+||+|.|...... .+.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4689999999998 99999999987 9999999999999999999999865433 34699999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEE
Q 016507 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (388)
Q Consensus 91 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~ 169 (388)
++||||||++.|..+|..|++|++|++|.|++..+ .+.. .+| ++++|++.++++++|
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G-------------------~la~y~~~~~dfc~K 139 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG-------------------TLAEYYVHPADFCYK 139 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCcccc---ccCCCcCC-------------------ceEEEEEechHheee
Confidence 99999999999999999999999999999999887 3333 355 999999999999999
Q ss_pred cCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 170 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
|||++|++++|++. ++++++++ .+.+++++|++|||+|+|++|+.+...||++|+.+|++++..++|+++++++|++.
T Consensus 140 LPd~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~ 217 (354)
T KOG0024|consen 140 LPDNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV 217 (354)
T ss_pred CCCCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence 99999999999999 79999996 57899999999999999999999999999999999999999999999999999998
Q ss_pred EEcCCCCC-CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 016507 250 FVNSKNCG-DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (388)
Q Consensus 250 v~~~~~~~-~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 327 (388)
+.+..... .+.+.+.+....+. .+|++|||+|....++.++..++.+ |+++..|. +....++++.+...+++++.
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~--g~~~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGM--GAEEIQFPIIDVALKEVDLR 294 (354)
T ss_pred EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEecc--CCCccccChhhhhhheeeee
Confidence 87665521 23344444444443 6999999999999999999999997 99888875 45778899999999999999
Q ss_pred EeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce--eEEEEeeCC
Q 016507 328 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWMGE 388 (388)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvv~~~~ 388 (388)
|++- ..+.+++.+++++++|+++++++|++.|+++++.+||+.+.++.. .|+++...+
T Consensus 295 g~fr---y~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 295 GSFR---YCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeee---eccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 9852 224589999999999999999999999999999999999988774 599998653
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-58 Score=406.32 Aligned_cols=347 Identities=26% Similarity=0.399 Sum_probs=306.5
Q ss_pred CCCCcceeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCC
Q 016507 11 AGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (388)
Q Consensus 11 ~~~~~~~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~ 88 (388)
...|.+++++++..++.. +++.+++.|+++++||+|||+|||||++|++.++|..+...+|.++|||++|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 445788999999999884 666899999999999999999999999999999999988899999999999999999999
Q ss_pred CCCCCCCCEE-eecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 016507 89 VDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (388)
Q Consensus 89 v~~~~vGd~V-~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~ 167 (388)
|++|++|||| +.+.+.+|..|++|.++++++|+..-+ .+.|+..+| ...+|+||+|+++++.++
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~~~DG--------------t~~~ggf~~~~~v~~~~a 148 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGVYHDG--------------TITQGGFQEYAVVDEVFA 148 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeE-eccccccCC--------------CCccCccceeEEEeeeeE
Confidence 9999999999 667789999999999999999993222 236777777 566789999999999999
Q ss_pred EEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc-hHHHHHHHcC
Q 016507 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFG 246 (388)
Q Consensus 168 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lg 246 (388)
+++|++++++.||.+.|+..|.|..| ...++.||++|-|.|+|++|.+++|+||++|+ +|+++++++ .|.+.+++||
T Consensus 149 ~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LG 226 (360)
T KOG0023|consen 149 IKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLG 226 (360)
T ss_pred EECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcC
Confidence 99999999999999999999999976 56788899999999997799999999999999 999999987 6667778899
Q ss_pred CcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 016507 247 VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL 326 (388)
Q Consensus 247 a~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i 326 (388)
|+..++..+ +++..+.+.+.+++++|-|.+. ....++.++.+++.+ |++|.+|... .++.++.+++..+.+.|
T Consensus 227 Ad~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~--~~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 227 ADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPE--KPLKLDTFPLILGRKSI 299 (360)
T ss_pred cceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcC--CcccccchhhhcccEEE
Confidence 999998873 2788888888877777777766 555589999999998 9999999843 37889999999999999
Q ss_pred EEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEEeeC
Q 016507 327 MGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWMG 387 (388)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~~~ 387 (388)
.|+.+++. .+.++++++..++.+... | +..+++++++|+++|++++.- |.||.+.
T Consensus 300 ~GS~vG~~---ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 300 KGSIVGSR---KETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred EeeccccH---HHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 99998874 789999999999976654 4 899999999999999999874 9998764
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.3e-55 Score=421.97 Aligned_cols=374 Identities=51% Similarity=0.918 Sum_probs=306.1
Q ss_pred CCCCcceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC-CCCCCcccccceeEEEEEecCCC
Q 016507 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENV 89 (388)
Q Consensus 11 ~~~~~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v 89 (388)
..+|++|||+++.++++++.++++|.|+|+++||+|||.++|||++|++.+.|... ...+|.++|||++|+|+++|+++
T Consensus 5 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 5 QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCC
Confidence 34678999999999987788999999999999999999999999999999988753 23578999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCCcccccc-CCceecccccccceeeeEEeecCce
Q 016507 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDL-RGETIHHFVSVSSFSEYTVLDIAHV 167 (388)
Q Consensus 90 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~-~~~~~~~~~~~g~~a~~~~~~~~~~ 167 (388)
++|++||||++.+..+|+.|.+|..+..+.|++.......+ ....|..++... .+.........|+|+||+.++.+++
T Consensus 85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 99999999999999999999999999999998865321100 000110000000 0000000112469999999999999
Q ss_pred EEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC
Q 016507 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (388)
Q Consensus 168 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga 247 (388)
+++|+++++++++.+++.+.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga 244 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence 99999999999999999999999988788899999999999999999999999999999679999999999999999999
Q ss_pred cEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 016507 248 TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (388)
Q Consensus 248 ~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 327 (388)
+++++.++ ...++.+.+++++++++|++||++|....+..+++++++++|+++.+|.......+.++...++ +++++.
T Consensus 245 ~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~ 322 (381)
T PLN02740 245 TDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSIT 322 (381)
T ss_pred cEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeEE
Confidence 99998765 1124777888877668999999999987799999999883399999997543223445544343 688999
Q ss_pred EeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 328 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
|++.+.+....+++++++++.++++++.++++++|+|+|+++|++.+.++...|++|++
T Consensus 323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred EEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 98776655445789999999999998888999999999999999999888778999874
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.5e-55 Score=420.54 Aligned_cols=362 Identities=37% Similarity=0.631 Sum_probs=304.5
Q ss_pred eeeeeecCCCC--------CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCC
Q 016507 17 CRAAIATAPGE--------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (388)
Q Consensus 17 ~ka~~~~~~~~--------~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~ 88 (388)
|||+++.+++. .++++++|.|+|+++||+|||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 79999998653 389999999999999999999999999999999998754 356899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceE
Q 016507 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (388)
Q Consensus 89 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~ 168 (388)
+++|++||||++.+...|+.|.+|+.|++++|.........|...+|..++.. ++.......+.|+|+||+.++.++++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~-~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRL-RGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccc-cCcccccccCcccceeeEEecccceE
Confidence 99999999999888889999999999999999875432222222221100000 00000001123699999999999999
Q ss_pred EcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc
Q 016507 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (388)
Q Consensus 169 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~ 248 (388)
++|+++++++|+.+++.++|||.++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999887888899999999999999999999999999996799999999999999999999
Q ss_pred EEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 016507 249 EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (388)
Q Consensus 249 ~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 328 (388)
+++++++ +++.+.+++++++++|++|||+|....+..++++++++ |+++.+|........+++...++.+++++.|
T Consensus 239 ~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g 314 (371)
T cd08281 239 ATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKG 314 (371)
T ss_pred eEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEE
Confidence 9999877 67888888887778999999999887799999999997 9999999754333467788888889999999
Q ss_pred eeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEE
Q 016507 329 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 384 (388)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv 384 (388)
++...+...++++++++++.+|++++.++++++|+|+|+++|++.+.++...|.||
T Consensus 315 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 315 SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred EecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 98765544567899999999999998889999999999999999999887764443
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=8.7e-55 Score=416.07 Aligned_cols=367 Identities=46% Similarity=0.841 Sum_probs=302.4
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++..++++++++++|.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 79999988887799999999999999999999999999999999998765556799999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
||++.+..+|+.|.+|+.++.+.|.+.......|+..+|..++. .+|...++..+.|+|+||+.+|.++++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 99998889999999999999999987543222343333321110 00100001112469999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
++++.+++++.|||+++...+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++.++
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~- 239 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND- 239 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-
Confidence 9999999999999998877889999999999999999999999999999977999999999999999999999998764
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCc
Q 016507 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 336 (388)
...++.+.+++++++++|++|||+|+...+..+++++++++|+++.+|.......+.++...++. +..+.|+..+....
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 318 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKG 318 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCc
Confidence 11456677888777789999999998777899999997723999999975433334455444443 44577775443333
Q ss_pred cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 337 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
..++++++++++++++.++++++++|||+|+++|++.++++...|++|++
T Consensus 319 ~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 319 RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 45789999999999998888999999999999999999887777999875
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=5.5e-55 Score=416.35 Aligned_cols=355 Identities=34% Similarity=0.580 Sum_probs=304.8
Q ss_pred ceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 16 ~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
+|||+++.+++.+++++++|.|+|+++||+|||.++++|++|++.++|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 599999999998899999999999999999999999999999999988653 3578999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCC-CCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
|+|++.+...|+.|.+|+.++.++|....... ..++ .+| .........|+|+||+.++..+++++|+++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~ 149 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TELSPALGIGAFAEKTLVHAGQCTKVDPAA 149 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------cccccccccccccceEEEehhheEECCCCC
Confidence 99999999999999999999999997532110 0000 001 000001224699999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
++++|+.+++.+.|||.++...+.+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++++++++
T Consensus 150 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~ 229 (358)
T TIGR03451 150 DPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS 229 (358)
T ss_pred ChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC
Confidence 99999999999999998877778899999999999999999999999999996699999999999999999999999987
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecC
Q 016507 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (388)
+ .++.+.+++.+++ ++|+||||+|+...+..++++++++ |+++.+|........++++..++.+++++.+++...
T Consensus 230 ~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 305 (358)
T TIGR03451 230 G---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGD 305 (358)
T ss_pred C---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCC
Confidence 7 6788888888887 8999999999877799999999997 999999975433345677777888899999887543
Q ss_pred CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEe
Q 016507 334 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 385 (388)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~ 385 (388)
....++++++++++++|++++.++++++|||+|+++|++.++++...|++|.
T Consensus 306 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 306 CLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred CCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 3345678999999999999888899999999999999999988877788875
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.5e-54 Score=413.16 Aligned_cols=367 Identities=46% Similarity=0.872 Sum_probs=304.4
Q ss_pred ceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 16 ~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
+|||+++..++++++++++|.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999988887779999999999999999999999999999999998876655689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
|+|+..+..+|+.|.+|++++++.|.+.....+.|...+|..++. .+|.+.....+.|+|+||+.++.++++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 999998899999999999999999987543222233333211110 0011111112346999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
+++|+.+++++.|||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998878888999999999999999999999999999967999999999999999999999998775
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC
Q 016507 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (388)
. ++++.+.+.+++++++|+||||+|+...+..+++++++++|+++.+|.......+.++...+.. +..+.++..+.+.
T Consensus 241 ~-~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 318 (368)
T cd08300 241 H-DKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVT-GRVWKGTAFGGWK 318 (368)
T ss_pred c-chHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhh-cCeEEEEEecccC
Confidence 1 1257788888877799999999998767899999997733999999975322334444444443 4577777666665
Q ss_pred ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEe
Q 016507 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 385 (388)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~ 385 (388)
..++++++++++.++++.+.++++++|+|+|+++|++.+.++...|++|+
T Consensus 319 ~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 319 SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 56789999999999999888899999999999999999988777799885
No 11
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=6.8e-54 Score=410.59 Aligned_cols=366 Identities=53% Similarity=0.973 Sum_probs=305.1
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
|+|||+++.+++++++++++|+|+|+++||+|||.+++||++|++.++|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 47999999988888999999999999999999999999999999999987665677999999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCC-CccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ-TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g-~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
||||++.+..+|+.|.+|+.++++.|.........|....+ -.++. ..|...+.....|+|+||+.++..+++++|++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 99999999999999999999999999875432112221100 00000 00000000113469999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++++++.+++.+.|||.++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.+++.
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~ 239 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNP 239 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcc
Confidence 99999999999999999988888899999999999999999999999999998679999999999999999999999987
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhc-CCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
.+. ...+.+.+++++++++|++|||+|....+..+++++++ + |+++.+|.......++++...++ +++++.|++..
T Consensus 240 ~~~-~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 316 (369)
T cd08301 240 KDH-DKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFG 316 (369)
T ss_pred ccc-chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcccccCHHHHh-cCCeEEEEecC
Confidence 641 13466777777766899999999988778999999999 4 89999998543334556544444 68999999877
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEE
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 384 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv 384 (388)
.+..+.+++++++++.++.+++.++++++|||+|+++|++.+++++..|++|
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 317 GYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred CCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 6655567899999999999988888999999999999999999988889887
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.2e-53 Score=402.63 Aligned_cols=336 Identities=27% Similarity=0.430 Sum_probs=294.0
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.+.+.. ..+|.++|||++|+|+++|++|+.|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998875 999999999999999999999999999999988775432 2358899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
|+|+..+...|+.|..|+.++++.|.+... .+|...+| +|+||+.++.++++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999986543 24444444 999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
+++|+.+++++.|||+++ ..+.+.+|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999976 5678899999999999999999999999999954999999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCH-HHHHhcCcEEEEeeecC
Q 016507 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILMGSLFGG 333 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~ 333 (388)
.+ .+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|... .. .++. ..++.+++++.|++...
T Consensus 218 ---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~--~~~~~~~~~~~~~~i~g~~~~~ 289 (339)
T cd08239 218 ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG-EL--TIEVSNDLIRKQRTLIGSWYFS 289 (339)
T ss_pred ---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC-Cc--ccCcHHHHHhCCCEEEEEecCC
Confidence 45 6677777777 8999999999988678999999997 9999999743 22 2332 45677899999987543
Q ss_pred CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 334 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
.++++++++++.+|++++.++++++|+|+++++|++.++++..+|+||++
T Consensus 290 ---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 ---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred ---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 35799999999999998888999999999999999999887767999875
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.6e-53 Score=403.17 Aligned_cols=365 Identities=50% Similarity=0.929 Sum_probs=299.1
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
..|||+++.++++.++++++|.|+|+++||+|||.+++||++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 569999999988669999999999999999999999999999999887742 45889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
||+|+..+...|+.|.+|+++++++|.+.... ..|... ++..++. ..|......-..|+|+||+.++.+.++++|++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~ 165 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPL 165 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCcccccccccccceeeEEechhheEECCCC
Confidence 99999998899999999999999999864320 011100 0000000 00000000001369999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++++++.+++.+.++|.+++..+++++|++|||+|+|++|++++|+|+++|+..|+++++++++.++++++|+++++++
T Consensus 166 l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~ 245 (378)
T PLN02827 166 APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245 (378)
T ss_pred CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence 99999999998999999877777889999999999999999999999999999668889889999999999999999987
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCH-HHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~i~g~~~~ 332 (388)
++ ..+++.+.+++++++++|+||||+|....+..+++.+++++|+++.+|..... ..++. ..++.+++++.|+...
T Consensus 246 ~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
T PLN02827 246 ND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFG 322 (378)
T ss_pred cc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecC
Confidence 64 11357777888776689999999999866899999999833999999975432 23333 3467789999998776
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEeeC
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 387 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~~ 387 (388)
.+....+++++++++++|++.+.++++++|+|+++++|++.+++++..|+||.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 323 GWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred CCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 5544567899999999999988889999999999999999999888789999874
No 14
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2e-52 Score=396.42 Aligned_cols=338 Identities=19% Similarity=0.300 Sum_probs=283.4
Q ss_pred CcceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccc-cCCC--CCCCCcccccceeEEEEEecCCCC
Q 016507 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVD 90 (388)
Q Consensus 14 ~~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~v~G~e~~G~Vv~vG~~v~ 90 (388)
...+||+++.++++ ++++++|.| ++++||||||.++|||++|+++++ |... ...+|.++|||++|+|+++ +++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 45789999999988 999999987 689999999999999999999875 3322 2357999999999999999 788
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 016507 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (388)
Q Consensus 91 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l 170 (388)
+|++||||++.+..+|+.|.+|+.+++++|++... +|..... ....|+|+||++++++.++++
T Consensus 78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~ 140 (343)
T PRK09880 78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPY 140 (343)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEEC
Confidence 99999999999999999999999999999987543 2321000 001259999999999999999
Q ss_pred CCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE
Q 016507 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (388)
Q Consensus 171 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v 250 (388)
|+++++++++.. .+++|||+++ ......++++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++++
T Consensus 141 P~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v 218 (343)
T PRK09880 141 PEKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL 218 (343)
T ss_pred CCCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE
Confidence 999999876644 4788999976 44566789999999999999999999999999779999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 016507 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (388)
+|+++ .++.+.. +. .+++|+||||+|++..+..++++++++ |+++.+|... ....+++..++.+++++.|+.
T Consensus 219 i~~~~---~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~g~~ 290 (343)
T PRK09880 219 VNPQN---DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG--APPEFPMMTLIVKEISLKGSF 290 (343)
T ss_pred ecCCc---ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC--CCCccCHHHHHhCCcEEEEEe
Confidence 99876 4444322 22 236999999999977789999999997 9999999743 335677777888999999986
Q ss_pred ecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 331 FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. .++++++++++++|++++.++++++|+|+|+++|++.+.+++. +|++|.+
T Consensus 291 ~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 291 RF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 32 3679999999999999888899999999999999999988764 6999864
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.9e-52 Score=392.80 Aligned_cols=344 Identities=27% Similarity=0.383 Sum_probs=284.7
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCc-ccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR-ILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~-v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|+++++..++...++++.+.|.+.|+||+|||.++|||+||++.+++..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 56777777765354778877778999999999999999999999999876656566 99999999999999 77889999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE-cCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK-VDPTV 174 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~-lP~~~ 174 (388)
|||++.+..+|+.|.+|++|.+++|.+.++ +|....+ ....|+|+||+.+|.++.++ +|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~--------------~~~~G~~aEyv~vp~~~~~~~~pd~~ 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGF---YGYAGLG--------------GGIDGGFAEYVRVPADFNLAKLPDGI 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccc---ccccccc--------------CCCCCceEEEEEeccccCeecCCCCC
Confidence 999999999999999999999999996654 2222111 00124999999999755555 58888
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNS 253 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~ 253 (388)
+.+++++..++.+++++........++++|+|+|+|++|++++++++..|+.+|++++.+++|++++++ .|++.+++.
T Consensus 143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~ 221 (350)
T COG1063 143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP 221 (350)
T ss_pred -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence 445555555999998764445556666699999999999999999999999999999999999999999 677777766
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
.. .+..+.+.+.++| ++|++|||+|....+..+++.++++ |+++.+|....... .++...++.+++++.|++.
T Consensus 222 ~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~- 295 (350)
T COG1063 222 SE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR- 295 (350)
T ss_pred cc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC-
Confidence 55 4677788889988 9999999999998899999999997 99999998653332 6777788899999999842
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCc--eeEEEEee
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVIWM 386 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kvvv~~ 386 (388)
.....+++.+++++.+|++++.++++++++++++++|++.+.++. ..|+++++
T Consensus 296 -~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 296 -PSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred -CCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 122468999999999999999999999999999999999998755 34998864
No 16
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=7.8e-52 Score=395.56 Aligned_cols=365 Identities=49% Similarity=0.922 Sum_probs=303.2
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
|+|||+++.+++++++++++|.|.++++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 5789999998887799999999999999999999999999999999988754 467899999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+..+...|+.|.+|..+..++|++.... ..|...++..++.. .|.-.....+.|+|+||+.++.++++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999988999999999999999999875532 12332222111100 00000001124699999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++.+
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999877888899999999999999999999999999997799999999999999999999999876
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
+ ....+.+.+++++++++|+||||+|....+..+++++++++|+++.+|... +...+++...++. ++++.|++.+.+
T Consensus 238 ~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~-~~~i~g~~~~~~ 314 (365)
T cd08277 238 D-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLIL-GRTWKGSFFGGF 314 (365)
T ss_pred c-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhh-CCEEEeeecCCC
Confidence 5 112356777777766899999999987778999999977239999999753 2334556656654 889999887766
Q ss_pred CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEe
Q 016507 335 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 385 (388)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~ 385 (388)
....++++++++++++.+++.++++++|+|+|+++|++.++++...|+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 315 KSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred ChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 555678999999999998888899999999999999999988876798873
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=9.1e-52 Score=396.87 Aligned_cols=347 Identities=22% Similarity=0.302 Sum_probs=279.5
Q ss_pred ceeeeeecCCCCCeEEEEeecCCCC-------CCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCC
Q 016507 16 QCRAAIATAPGEPLVIDEVIVDPPN-------SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (388)
Q Consensus 16 ~~ka~~~~~~~~~~~~~~~~~p~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~ 88 (388)
-|||+++.++++ ++++++|.|+|+ ++||||||.++|||++|++.++|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 389999999986 999999999874 68999999999999999999988654 356899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 016507 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (388)
Q Consensus 89 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~---~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 165 (388)
|++|++||||++.+...|+.|.+|++|++++|.+.... ..+|+...| ...|+|+||+.+|..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG---------------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC---------------CCCCceEEEEEechh
Confidence 99999999999999999999999999999999874321 012221100 012599999999964
Q ss_pred --ceEEcCCCCCc----cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHH
Q 016507 166 --HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF 239 (388)
Q Consensus 166 --~~~~lP~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 239 (388)
+++++|++++. ..++.+.+.+.|||+++ ...++.++++|||.|+|++|++++|+|+.+|++.|++++++++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998754 35677777899999976 457899999999988899999999999999996677677888899
Q ss_pred HHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCH--------------HHHHHHHHHhhcCCceEEEEc
Q 016507 240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--------------SLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 240 ~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~--------------~~~~~~~~~l~~~~G~~v~~g 304 (388)
++++++|++.+...++ .++.+.+.+++++ ++|++|||+|.+ ..++.++++++++ |+++.+|
T Consensus 224 ~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G 299 (393)
T TIGR02819 224 AQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPG 299 (393)
T ss_pred HHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEee
Confidence 9999999985443333 4577778888877 899999999986 3699999999998 9999999
Q ss_pred cCCCCCc-----------cccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCccee-eeEecchHHHHHH
Q 016507 305 VDQPGSQ-----------LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFD 372 (388)
Q Consensus 305 ~~~~~~~-----------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~~~~A~~ 372 (388)
....... +++.....+.+++++.+.. ....+++.++++++.+|++++.++++ ++|||+|+++||+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~ 376 (393)
T TIGR02819 300 LYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYA 376 (393)
T ss_pred ecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHH
Confidence 8532111 2233444455667776632 11123447899999999999888787 7899999999999
Q ss_pred HHhcCceeEEEEeeC
Q 016507 373 LLIKGKCLRCVIWMG 387 (388)
Q Consensus 373 ~~~~~~~~kvvv~~~ 387 (388)
.+.++...|++|+++
T Consensus 377 ~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 377 EFDAGAAKKFVIDPH 391 (393)
T ss_pred HHhhCCceEEEEeCC
Confidence 998887789999864
No 18
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2.6e-51 Score=382.26 Aligned_cols=316 Identities=25% Similarity=0.320 Sum_probs=271.2
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccC-CCCCCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++.+.+.| ++++++|.|+|++|||||||.|+++|+.|+...+|. .+..++|.++|.|++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999988876 888999999999999999999999999999999997 33456899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||||+..+ .. + . .|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~------------------------~--~-------------------~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GV------------------------G--R-------------------DGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CC------------------------C--C-------------------CCcceeEEEecHHHceeCCCC
Confidence 999998532 00 0 1 359999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+|+++||+++++++|||+++....++++|++|||+|+ |++|++++|+||++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999986 9999999999999998 6777777778788999999999999
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
+++ +++.+.+++++++ ++|+|||++|+.. +..++++++++ |+++.+|...+.....++...++.+.+.+.|...
T Consensus 194 y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~ 268 (326)
T COG0604 194 YRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTL 268 (326)
T ss_pred CCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecc
Confidence 988 7899999999999 9999999999998 88899999998 9999999865334556777777888888888875
Q ss_pred cCC---CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcC--ceeEEEEee
Q 016507 332 GGL---KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG--KCLRCVIWM 386 (388)
Q Consensus 332 ~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~--~~~kvvv~~ 386 (388)
... ...+.+.++.+++.+|.++ +.++++|||+|..+|..+.... ..+|+||++
T Consensus 269 ~~~~~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 269 GSRDPEALAEALAELFDLLASGKLK--PVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred eecchHHHHHHHHHHHHHHHcCCCc--ceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 543 1234677799999999554 4588999999965555543333 446999874
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.2e-50 Score=386.08 Aligned_cols=340 Identities=24% Similarity=0.354 Sum_probs=283.6
Q ss_pred CCCCcceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCC
Q 016507 11 AGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVD 90 (388)
Q Consensus 11 ~~~~~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~ 90 (388)
+.-||+++++.+.+....+++.+++.|+|+++||+|||.+++||++|++++.|.++...+|.++|||++|+|+++|++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~ 86 (360)
T PLN02586 7 EEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVK 86 (360)
T ss_pred hhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCC
Confidence 44678888888888776799999999999999999999999999999999988765446789999999999999999999
Q ss_pred CCCCCCEEeecCC-CCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 016507 91 GVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (388)
Q Consensus 91 ~~~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 165 (388)
+|++||+|++.+. ..|+.|.+|++|+++.|++..+.. ..|...+ |+|+||+.++.+
T Consensus 87 ~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~ 147 (360)
T PLN02586 87 KFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNY-------------------GGYSDMIVVDQH 147 (360)
T ss_pred ccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCC-------------------CccceEEEEchH
Confidence 9999999986554 579999999999999998754310 0122223 499999999999
Q ss_pred ceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchH-HHHHHH
Q 016507 166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKR 244 (388)
Q Consensus 166 ~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~ 244 (388)
+++++|+++++++|+.+++.+.|+|+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.+++
T Consensus 148 ~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~ 226 (360)
T PLN02586 148 FVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINR 226 (360)
T ss_pred HeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHh
Confidence 9999999999999999999999999977666667899999999999999999999999999 78877666655 456678
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCc
Q 016507 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK 324 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 324 (388)
+|++++++..+ . +.+++.++ ++|+|||++|....+..++++++++ |+++.+|... ....+++..++.+++
T Consensus 227 ~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~ 296 (360)
T PLN02586 227 LGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRK 296 (360)
T ss_pred CCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCe
Confidence 99999998665 2 24555443 7999999999877789999999997 9999999643 345677777777888
Q ss_pred EEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 325 ILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.+.|++.+. ..+++++++++.+|++++. + ++|+|+|+++|++.+.+++. +|+|+++
T Consensus 297 ~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 297 LVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 888876432 3578999999999987653 4 68999999999999998875 5999976
No 20
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-49 Score=378.61 Aligned_cols=339 Identities=23% Similarity=0.352 Sum_probs=283.8
Q ss_pred eeeeeecCCCCCeEEEEeecCCC-CCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++++++. ++++++|.|+| .++||+|||.++++|++|++.+.+.. ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 69999999876 99999999997 59999999999999999987532211 12358899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
|+|++.+..+|+.|.+|..|+++.|..... .|...+| +|+||+.++.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999976432 3433344 999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
+++|+.+. .+.+++.+ .....+.++++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998875 55667775 46678899999999999999999999999999955889999999999999999999998776
Q ss_pred CCCccHHHHHHhhcCC-Ccc-EEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccc-cCHHHHHhcCcEEEEeeec
Q 016507 256 CGDKSVSQIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g-~~d-vvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~i~g~~~~ 332 (388)
.. .+.+.+++.+ ++| ++|||+|....+..++++++++ |+++.+|.......++ .++..++.+++++.|++.+
T Consensus 215 ---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 289 (347)
T PRK10309 215 ---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMN 289 (347)
T ss_pred ---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEecc
Confidence 34 4557777766 888 9999999987789999999997 9999999754321111 1223567789999998754
Q ss_pred CCC--ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 333 GLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 333 ~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
... ..++++++++++++|.++++++++++|+|+|+++|++.+.++.. +|+|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 290 YSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred ccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 221 23578899999999999888999999999999999999988765 5999975
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.8e-49 Score=377.15 Aligned_cols=335 Identities=24% Similarity=0.403 Sum_probs=285.9
Q ss_pred eeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccC-CCCCCCCcccccceeEEEEEecCCCCCCCCCCEE
Q 016507 20 AIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (388)
Q Consensus 20 ~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V 98 (388)
+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 456777777899999999999999999999999999999887443 3334568999999999999999999887 99999
Q ss_pred eecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC------
Q 016507 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP------ 172 (388)
Q Consensus 99 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~------ 172 (388)
++.+..+|+.|.+|+++++++|..... .|...+| +|+||+.++.++++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccccc
Confidence 999999999999999999999976543 3333334 999999999999999999
Q ss_pred CCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 173 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
++++++++.+.+.+.|+|+++. ...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999999999999999764 5789999999999999999999999999999 8999999999999999999999998
Q ss_pred CCCCCCccHHHHHHhhcCC-Ccc----EEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GAD----YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~d----vvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 327 (388)
+.+.+.+++.+.+++++++ ++| +||||+|+...+..++++++++ |+++.+|.... ...+++..++.+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEE
Confidence 7662223577778888877 776 8999999988788999999997 99999997532 34566667777788888
Q ss_pred EeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEEee
Q 016507 328 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 386 (388)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~~ 386 (388)
|++... .++++++++++++|++.+.++++ +|||+|+++||+.+.+++.. |+++++
T Consensus 294 g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 294 GNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 876322 45799999999999988877774 79999999999999887754 888753
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.8e-49 Score=377.85 Aligned_cols=332 Identities=24% Similarity=0.362 Sum_probs=275.1
Q ss_pred eeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCCEE
Q 016507 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (388)
Q Consensus 19 a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V 98 (388)
+++..+...++++.+++.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 34444544458888999999999999999999999999999998876444568999999999999999999999999999
Q ss_pred eecCCC-CCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 99 IPHFLA-DCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 99 ~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
++.+.. .|+.|.+|++|++++|.+..+.. ..|...+ |+|+||+.++.++++++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ-------------------GGYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC-------------------CccccEEEEchHHeEECCCC
Confidence 876655 69999999999999999765310 0121122 49999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcC-CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch-HHHHHHHcCCcEEE
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFV 251 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~-~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~ 251 (388)
+++++|+++++...|+|+++..... .++|++|||.|+|++|++++|+|+.+|+ +|++++.+++ +.++++++|+++++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999987644332 3689999999999999999999999999 7888877654 47888899999999
Q ss_pred cCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
++.+ . +.+.+.++ ++|+||||+|....+..++++++++ |+++.+|... ....+++..++.+++++.|++.
T Consensus 229 ~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~ 298 (375)
T PLN02178 229 VTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQI 298 (375)
T ss_pred cCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCc
Confidence 8654 2 34555543 7999999999987689999999997 9999999743 3456777788888999999865
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. .++++++++++.+|++.+. + ++|||+|+++|++.+.+++. +|+|+++
T Consensus 299 ~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 299 GG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred cC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 43 3578999999999987654 5 67999999999999998875 5999876
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.1e-49 Score=376.47 Aligned_cols=335 Identities=24% Similarity=0.333 Sum_probs=267.6
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC---CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++..++.+++++++|.|+|+++||||||.|++||++|++.++|.++. ..+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 689999865444999999999999999999999999999999999987532 246889999999999999999 9999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||||++.+...|+.|.+|++++.+.|+..... ..|... ..|+|+||+.++.+.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~------------------~~G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKG------------------LHGFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCC------------------CCccceeEEEeccccEEECCCC
Confidence 999999988889999999999999999864421 112210 1249999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHH------hcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcC---CchHHHHHHH
Q 016507 174 VPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKR 244 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~------~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~ 244 (388)
++ +. +.+..++.+++.++.. ...+++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|.+++++
T Consensus 141 ~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 99 44 3444466555543321 2235789999999999999999999999999 8999987 6789999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccC----HHHHH
Q 016507 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS----SFEVL 320 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~----~~~~~ 320 (388)
+|++. +++.+ +++.+ . + ..+++|+||||+|+...+..+++.++++ |+++.+|........+++ ...++
T Consensus 218 ~Ga~~-v~~~~---~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~ 289 (355)
T cd08230 218 LGATY-VNSSK---TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLV 289 (355)
T ss_pred cCCEE-ecCCc---cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHh
Confidence 99987 46554 34433 2 1 2238999999999887789999999997 999999976442344455 34567
Q ss_pred hcCcEEEEeeecCCCccCcHHHHHHHHhCCCC----CCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 321 HSGKILMGSLFGGLKAKSDIPILLKRYMDKEL----ELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
.+++++.|+.... .++++++++++.++.+ .++++++++|+++|+.+|++.+.++. .|+||++
T Consensus 290 ~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 290 LGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred hcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 7899999985432 4678999999988862 36678899999999999999887544 5999875
No 24
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=7.7e-49 Score=369.28 Aligned_cols=321 Identities=21% Similarity=0.256 Sum_probs=273.4
Q ss_pred eeecCCCC----CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 20 AIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 20 ~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
+.+..++. +++++++|.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 44555542 38899999999999999999999999999999999876544457899999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 96 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
|+|++.+. ..|+.|.+|..++++.|.+..+ .|+..+| +|+||+.++.++++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCCC
Confidence 99987664 4699999999999999987654 4443444 99999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
++++++.+++.+.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|.++++++|++++++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999987 46889999999999999999999999999999 799999999999999999999998854
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ...++...++.+++++.+++...
T Consensus 218 ~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~- 282 (329)
T TIGR02822 218 D---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSNT- 282 (329)
T ss_pred c---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecCC-
Confidence 3 11 126899999988877799999999997 999999974322 23566667777899999886432
Q ss_pred CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 335 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
+.++.++++++.+|++. +++++|+|+|+++|++.+.++.. +|+||
T Consensus 283 --~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 283 --RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred --HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 35688899999999774 46799999999999999988776 49887
No 25
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=4.9e-48 Score=369.17 Aligned_cols=349 Identities=28% Similarity=0.411 Sum_probs=295.0
Q ss_pred eeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCC------
Q 016507 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG------ 91 (388)
Q Consensus 18 ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~------ 91 (388)
||+++.++++.+++++++.|+|+++||+|||.++++|++|+....|.++...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998867999999999999999999999999999999999887653467889999999999999999986
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCC-CCccccccCCceecccccccceeeeEEeecC-ceEE
Q 016507 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVK 169 (388)
Q Consensus 92 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-~~~~ 169 (388)
|++||+|+..+..+|+.|..|+.+..+.|..... .|...+ +. .-..|+|++|+.++.+ ++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~~~ 145 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAIVR 145 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCceEE
Confidence 9999999999999999999999999999987654 332211 00 0012599999999986 7999
Q ss_pred cCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 170 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
+|++++..++++++++++|||+++.+.....++++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.
T Consensus 146 lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~ 225 (361)
T cd08231 146 VPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225 (361)
T ss_pred CCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCe
Confidence 99999999999998999999998866666679999999998999999999999999978999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 016507 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (388)
Q Consensus 250 v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 328 (388)
+++.++....++...+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|........+++...++.+++++.+
T Consensus 226 vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 304 (361)
T cd08231 226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIG 304 (361)
T ss_pred EEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEE
Confidence 9987652112234567788877 8999999999876689999999997 9999999754334456666667888999998
Q ss_pred eeecCCCccCcHHHHHHHHhCC--CCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 329 SLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
++... .++++++++++.++ .+.+.++++++|+++++++|++.++++..+|+||++
T Consensus 305 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 305 VHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred cccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 86432 45789999999888 566777889999999999999999888777999864
No 26
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.3e-47 Score=367.07 Aligned_cols=370 Identities=43% Similarity=0.772 Sum_probs=299.3
Q ss_pred CCCcceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCC
Q 016507 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (388)
Q Consensus 12 ~~~~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~ 91 (388)
.+-.+|||+++..++++++++++|.|++.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.
T Consensus 3 ~~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~ 81 (373)
T cd08299 3 GKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTT 81 (373)
T ss_pred cccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCcc
Confidence 3456799999998887799999999999999999999999999999999988763 356889999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 016507 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (388)
Q Consensus 92 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP 171 (388)
|++||+|++.+..+|+.|.+|+.++.+.|++.......|...++..++. -+|.+.+...+.|+|+||+.++.++++++|
T Consensus 82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP 160 (373)
T cd08299 82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKID 160 (373)
T ss_pred CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccccccCCCcccceEEecccceeeCC
Confidence 9999999998889999999999999999987543211122211111110 011111111235799999999999999999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
+++++++++++.+++.|||.++...++++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|+++++
T Consensus 161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i 240 (373)
T cd08299 161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECI 240 (373)
T ss_pred CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence 99999999999999999999887888999999999998899999999999999986799999999999999999999999
Q ss_pred cCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHh-hcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 016507 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (388)
+..+ ...++.+.+.+++.+++|++|||+|+...+..++..+ +.+ |+++.+|.......++++... +.++..+.+++
T Consensus 241 ~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~ 317 (373)
T cd08299 241 NPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPML-LLTGRTWKGAV 317 (373)
T ss_pred cccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHH-HhcCCeEEEEE
Confidence 8765 1123667777776668999999999866677777765 465 999999975332334555432 34678899988
Q ss_pred ecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 331 FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
.+.+...+++.++++.+.++.+.+.++++++|+++++.+|++.+.+.+..|+++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred ecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 77665556788888888888777777889999999999999999887777888863
No 27
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.9e-49 Score=334.32 Aligned_cols=319 Identities=23% Similarity=0.290 Sum_probs=278.4
Q ss_pred CCCCcceeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCC
Q 016507 11 AGKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (388)
Q Consensus 11 ~~~~~~~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~ 88 (388)
...|+..|.+++++.|.+ ++++++|.|+|.++|++||-.|+|+|..|+.+.+|.+.+.+.|++||-|.+|+|+++|++
T Consensus 3 ~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~g 82 (336)
T KOG1197|consen 3 AASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEG 82 (336)
T ss_pred CCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCC
Confidence 345777899999988865 999999999999999999999999999999999999977788999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceE
Q 016507 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (388)
Q Consensus 89 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~ 168 (388)
|+++++||||+.. + + +|.|+|++.+|...++
T Consensus 83 vtdrkvGDrVayl----------------------------~--~-------------------~g~yaee~~vP~~kv~ 113 (336)
T KOG1197|consen 83 VTDRKVGDRVAYL----------------------------N--P-------------------FGAYAEEVTVPSVKVF 113 (336)
T ss_pred ccccccccEEEEe----------------------------c--c-------------------chhhheeccccceeec
Confidence 9999999999742 1 1 3599999999999999
Q ss_pred EcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC
Q 016507 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (388)
Q Consensus 169 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga 247 (388)
++|+.+++++||++...++|||..+++..++++|++||++.| |++|+++.|++++.|+ .+|++.++.+|.+.+++.|+
T Consensus 114 ~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~ 192 (336)
T KOG1197|consen 114 KVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGA 192 (336)
T ss_pred cCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999965 9999999999999999 99999999999999999999
Q ss_pred cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 016507 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL 326 (388)
Q Consensus 248 ~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i 326 (388)
+|.++++. +++.+.+.++|+| |+|+++|.+|.+. +..++.+|++. |.++.+|+.. ...-+++...+-.+++++
T Consensus 193 ~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~l 266 (336)
T KOG1197|consen 193 EHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQL 266 (336)
T ss_pred cceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhh
Confidence 99999998 9999999999999 9999999999988 99999999998 9999999854 333345555555566665
Q ss_pred EEeeecCCC-ccCc----HHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEeeC
Q 016507 327 MGSLFGGLK-AKSD----IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 387 (388)
Q Consensus 327 ~g~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~~ 387 (388)
....+.+|. .+.. ..+++.++-+|.+++. |.|+|||+++.+|+.+++++.. +|+++.+.
T Consensus 267 vrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 267 VRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred ccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 544333332 2222 3467778888977666 9999999999999999999876 59998653
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.1e-47 Score=365.44 Aligned_cols=335 Identities=25% Similarity=0.427 Sum_probs=290.4
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCC---C--------CCCCCcccccceeEEEEEe
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---F--------PAVFPRILGHEAIGVVESV 85 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~--------~~~~p~v~G~e~~G~Vv~v 85 (388)
|||+++.++++ ++++++|.|+|+++||+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 79999998876 9999999999999999999999999999987665321 1 0136889999999999999
Q ss_pred cCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 016507 86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (388)
Q Consensus 86 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 165 (388)
|++++.|++||+|+..+..+|+.|.+|++++.++|....+ .|+.. ..|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGG------------------GGGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCC------------------CCCceeeEEEechH
Confidence 9999999999999998889999999999999999975432 22211 02499999999999
Q ss_pred ceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc
Q 016507 166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (388)
Q Consensus 166 ~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l 245 (388)
.++++|+++++++++.+ .++.|||.++ ..++++++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998876 5788999977 778899999999999999999999999999997899999999999999999
Q ss_pred CCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCc
Q 016507 246 GVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK 324 (388)
Q Consensus 246 ga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 324 (388)
|++.++++++ .++.+.+++++++ ++|++|||+|....+..++++++++ |+++.+|... ...+++...++.+++
T Consensus 217 ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~ 290 (351)
T cd08233 217 GATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEK 290 (351)
T ss_pred CCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCc
Confidence 9999999887 7788889888877 7999999999876689999999997 9999999754 345677777888899
Q ss_pred EEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchH-HHHHHHHhcCce--eEEEE
Q 016507 325 ILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI-NSAFDLLIKGKC--LRCVI 384 (388)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~-~~A~~~~~~~~~--~kvvv 384 (388)
++.|++... .+++++++++++++.+++.++++++|+++|+ ++|++.+.++.. +|+||
T Consensus 291 ~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 291 TLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred EEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 999986432 4689999999999998888888999999996 799999888764 69887
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=9.6e-48 Score=366.00 Aligned_cols=341 Identities=22% Similarity=0.337 Sum_probs=282.2
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
.+++|+++..+++++++++++.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 34899999999998999999999999999999999999999999999887654457899999999999999999999999
Q ss_pred CCEEeecCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 95 GDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 95 Gd~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
||+|++.+.. .|+.|.+|.+++.+.|....+....++ ..| ....|+|+||+.++...++++|++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP~~ 152 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIPEG 152 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECCCC
Confidence 9999876644 699999999999999987532100000 011 111359999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHH-HHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga~~v~~ 252 (388)
+++++|+.+++.+.|||.++......++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+. ++++|++++++
T Consensus 153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~ 231 (357)
T PLN02514 153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV 231 (357)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence 99999999999999999987655556899999999989999999999999999 78888777766654 46699998887
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
+.+ . +.+.+.+. ++|++|||+|....+..++++++++ |+++.+|... ....++...++.+++++.|++..
T Consensus 232 ~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~ 301 (357)
T PLN02514 232 SSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN--TPLQFVTPMLMLGRKVITGSFIG 301 (357)
T ss_pred CCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCcccHHHHhhCCcEEEEEecC
Confidence 654 2 23444443 7999999999876689999999997 9999999753 23567777788889999998754
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEeeC
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 387 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~~ 387 (388)
. ..+++++++++++|++ .+++ ++|||+|+.+|++.+.++.. +|+|++++
T Consensus 302 ~---~~~~~~~~~~~~~g~l--~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 302 S---MKETEEMLEFCKEKGL--TSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred C---HHHHHHHHHHHHhCCC--cCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 3 3578999999999965 4456 68999999999999998876 59999875
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4e-47 Score=363.08 Aligned_cols=364 Identities=33% Similarity=0.591 Sum_probs=298.2
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
|+|||+++.+++.++++++.+.|++.++||+|||.++++|++|++...|.++ ..+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 6799999999877799999999999999999999999999999999988654 346889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceec-ccccccceeeeEEeecCceEEcCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH-HFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~-~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
||+|++.+. .|++|.+|+.+++++|.........|..++|---..+.++.+++ +....|+|++|+.++.++++++|++
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 999998764 89999999999999998644222223222220000000000000 1223579999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++++++.+++.+.||+.++.....++++++|||+|+|++|++++++|+..|+++|+++++++++.++++++|+++++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999988888889999999999889999999999999999779999999999999999999999998
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecC
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (388)
++ .++.+.+.+.+++++|+++||+|....+..++++++++ |+++.+|.........+++..++.+++.+.++....
T Consensus 239 ~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 239 KE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 76 67778888887339999999999766689999999997 999999975333445677777667899998876544
Q ss_pred CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEe
Q 016507 334 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 385 (388)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~ 385 (388)
....+.+++++++++++++.+.+++ +.|+++++++|++.+.++...|+||+
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred cChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 3334567889999999987553444 68999999999999988877798874
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.5e-48 Score=366.01 Aligned_cols=323 Identities=21% Similarity=0.228 Sum_probs=259.6
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC----CCCCcccccceeEEEEEecCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIGVVESVGENVD 90 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~----~~~p~v~G~e~~G~Vv~vG~~v~ 90 (388)
|..||++++++++ ++++++|.|+ +++||||||.++|||++|+++++|.+.. ..+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 4578999999987 9999999995 9999999999999999999999987532 357999999999999998864
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 016507 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (388)
Q Consensus 91 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l 170 (388)
.|++||||++.+...|+ |+.| +..++|.+..+ .|...+| +|+||+.+|.++++++
T Consensus 77 ~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 131 (341)
T cd08237 77 TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKL 131 (341)
T ss_pred ccCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEEC
Confidence 79999999998887777 5456 45677876543 2333334 9999999999999999
Q ss_pred CCCCCccccccccchhhhhHHHHHH--hcCCCCCCEEEEEccchhHHHHHHHHHH-cCCcEEEEEcCCchHHHHHHHcCC
Q 016507 171 DPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGV 247 (388)
Q Consensus 171 P~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga 247 (388)
|+++++++||.+. +++++|+++.. .+.+++|++|||+|+|++|++++|+++. .|..+|++++++++|+++++..++
T Consensus 132 P~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~ 210 (341)
T cd08237 132 PDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADE 210 (341)
T ss_pred CCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCc
Confidence 9999999887665 88888887643 3457889999999999999999999986 665589999999999999987665
Q ss_pred cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCC---HHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcC
Q 016507 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG 323 (388)
Q Consensus 248 ~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 323 (388)
+..++ ++. .+ ++|+|||++|+ +..+..++++++++ |+++.+|... .+.++++..++.++
T Consensus 211 ~~~~~-------~~~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~ 273 (341)
T cd08237 211 TYLID-------DIP-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKG 273 (341)
T ss_pred eeehh-------hhh-------hccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCc
Confidence 53321 111 12 79999999994 45689999999997 9999999742 34567777788899
Q ss_pred cEEEEeeecCCCccCcHHHHHHHHhCC---CCCCCcceeeeEecc---hHHHHHHHHhcCceeEEEEeeC
Q 016507 324 KILMGSLFGGLKAKSDIPILLKRYMDK---ELELDKFVTHEMKFE---EINSAFDLLIKGKCLRCVIWMG 387 (388)
Q Consensus 324 ~~i~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~l~---~~~~A~~~~~~~~~~kvvv~~~ 387 (388)
+++.|+.... .++++++++++.++ ...++++++++|+++ ++++|++.+.++..+|+||+++
T Consensus 274 ~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 274 LTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred eEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 9999985322 35789999999998 346788999999985 6666666665555579999875
No 32
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.2e-47 Score=361.73 Aligned_cols=362 Identities=41% Similarity=0.766 Sum_probs=307.3
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
+||+++.+++.++++++.+.|.+++++|+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 47899998887799999999999999999999999999999999888754 34678999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|+..+...|+.|.+|+.++.++|+........|...+|..++.. +|.+.++..+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999988889999999999999999886654445544444333321 2222333344679999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
++++.+.+++.+||.++...+++.++++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|++++++.++
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~- 237 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD- 237 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc-
Confidence 9999999999999998888889999999999988999999999999999966888888999999999999999998776
Q ss_pred CCc--cHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhh-cCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecC
Q 016507 257 GDK--SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (388)
Q Consensus 257 ~~~--~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (388)
. ++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.........++...+ .++..+.|.+...
T Consensus 238 --~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~ 313 (365)
T cd05279 238 --QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG 313 (365)
T ss_pred --ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence 4 67777888775599999999997666899999999 97 9999998753334566777676 6678888887766
Q ss_pred CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEe
Q 016507 334 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 385 (388)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~ 385 (388)
+...+.+.++++++.++.+++.++++++|+++++.+|++.+.+++..|++|+
T Consensus 314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 314 WKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred CchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 6666789999999999988876678899999999999999988777788763
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4e-46 Score=354.69 Aligned_cols=343 Identities=26% Similarity=0.317 Sum_probs=286.3
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++. +++.+.+.|.+.++||+|||.++++|++|++.+.+.+....+|.++|||++|+|+++|+++++|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999886 88899999999999999999999999999998887765556689999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCCC
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~lP~~~ 174 (388)
+|+..+..+|+.|..|..++.+.|........++...+ |+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD-------------------GVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------------cceeEEEEcchhhCceEECCCCC
Confidence 99988878999999999999999976431101111122 499999999974 899999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
++++++.++..+.||++++ ..+.++++++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999998999999974 678899999999998899999999999999996799999999999999999999999987
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHH--HHhcCcEEEEeee
Q 016507 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE--VLHSGKILMGSLF 331 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~--~~~~~~~i~g~~~ 331 (388)
+ .++.+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|.........++... ...+...+.+.+.
T Consensus 220 ~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 295 (351)
T cd08285 220 N---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC 295 (351)
T ss_pred C---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeec
Confidence 7 6778888887776 8999999999877689999999997 999999975433333444222 2234566665432
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcc-eeeeEecchHHHHHHHHhcCc--eeEEEEee
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAFDLLIKGK--CLRCVIWM 386 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~~~~A~~~~~~~~--~~kvvv~~ 386 (388)
. ...++++++++++.+|++.+..+ +++.|+++++++|++.+++++ .+|++|++
T Consensus 296 ~--~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 296 P--GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred C--CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 1 12467999999999998887443 455699999999999998876 35999874
No 34
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=4.3e-46 Score=360.82 Aligned_cols=333 Identities=20% Similarity=0.224 Sum_probs=270.2
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCccccccc-ccCCCC------CCCCcccccceeEEEEEecC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP------AVFPRILGHEAIGVVESVGE 87 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~------~~~p~v~G~e~~G~Vv~vG~ 87 (388)
|+|||+++.+++. ++++++|.|+|+++||+|||.++|||++|++.+ .|.... ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 6799999999986 999999999999999999999999999999976 453211 24688999999999999999
Q ss_pred CCC-CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC-
Q 016507 88 NVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA- 165 (388)
Q Consensus 88 ~v~-~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~- 165 (388)
+|+ .|++||||++.+...|+.|.+|.. +|+..+| +|+||+.++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G-------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG-------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC-------------------cceEEEEecHHh
Confidence 998 599999999988888998887721 2222334 99999999986
Q ss_pred ---ceEEcCCCCCccccccccc-h-hhhhHHHH--------HHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcC--CcEE
Q 016507 166 ---HVVKVDPTVPPNRACLLSC-G-VSTGVGAA--------WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG--ATRI 229 (388)
Q Consensus 166 ---~~~~lP~~~~~~~aa~~~~-~-~~ta~~~l--------~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g--~~~V 229 (388)
+++++|+++++++|+.+.. . ..+++.++ .+.+++++|++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 6899999999999886531 1 11233221 24567899999999985 999999999999975 4579
Q ss_pred EEEcCCchHHHHHHHc--------CCc-EEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCce
Q 016507 230 IGVDVISEKFEIGKRF--------GVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK 299 (388)
Q Consensus 230 i~~~~~~~~~~~~~~l--------ga~-~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~ 299 (388)
++++++++|+++++++ |++ .++++++ ..++.+.+++++++ ++|++||++|....+..++++++++ |+
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~ 283 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GC 283 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-Ce
Confidence 9999999999999997 776 5677643 14577888888887 8999999999877799999999997 98
Q ss_pred EEEEccCC-CCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCc
Q 016507 300 TIVLGVDQ-PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 378 (388)
Q Consensus 300 ~v~~g~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~ 378 (388)
++.++... .....++++..++.+++++.|+.... ..+++++++++++|++++.++++++|||+++++|++.+..+.
T Consensus 284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~ 360 (410)
T cd08238 284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIP 360 (410)
T ss_pred EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccC
Confidence 88775432 12234677777888999999986332 357899999999999999889999999999999999998444
Q ss_pred eeEEEEeeC
Q 016507 379 CLRCVIWMG 387 (388)
Q Consensus 379 ~~kvvv~~~ 387 (388)
.+|+||.++
T Consensus 361 ~gKvvl~~~ 369 (410)
T cd08238 361 GGKKLIYTQ 369 (410)
T ss_pred CceEEEECC
Confidence 569999764
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.5e-45 Score=349.13 Aligned_cols=335 Identities=21% Similarity=0.417 Sum_probs=282.7
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999999885 99999999999999999999999999999999888765556789999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|++.+..+|+.|.+|..+++++|.+..+ .++.++ |+|++|+.++..+++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRD-------------------GGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEccC-------------------CcceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999975442 222223 49999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHH-cCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
++++ +...+.+++. +....++++|++|||+|+|++|++++|+|+. +|++.|+++++++++.++++++|++++++.++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4457788885 5677889999999999999999999999996 69967888999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
..+.+.+... + ++|++||++|+...+..++++++++ |+++.+|.... ...++...+..+++++.+...
T Consensus 216 ---~~~~~~~~~~--g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~--- 284 (339)
T PRK10083 216 ---EPLGEALEEK--GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL--- 284 (339)
T ss_pred ---ccHHHHHhcC--CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec---
Confidence 5566666432 3 5789999999876799999999997 99999997432 333444455567777777643
Q ss_pred CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCc--eeEEEEeeCC
Q 016507 335 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVIWMGE 388 (388)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kvvv~~~~ 388 (388)
..+.+++++++++++++.+.++++++|+++++++|++.+.++. .+|+|+.+.|
T Consensus 285 -~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 -NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred -ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2357899999999998877666789999999999999987543 4699998865
No 36
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.6e-45 Score=346.58 Aligned_cols=331 Identities=24% Similarity=0.384 Sum_probs=285.4
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++.+++++++|.|+++++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999965699999999999999999999999999999999988764445688999999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 97 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
+|++.+ ...|++|.+|..|+.+.|..... .|+..+| +|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCC
Confidence 998754 46799999999999999987664 3333334 999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
+.+++.+++.+.|||+++. ...+.++++|||+|+|++|++++++|+.+|+ +|+++++++++.++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 9999999999999999774 4589999999999999999999999999999 8999999999999999999999999876
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC
Q 016507 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (388)
.++.+.++++ +++|++||++|....+..++++++++ |+++.+|... ...+++...++.+++++.+.....
T Consensus 217 ---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~-- 286 (333)
T cd08296 217 ---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT-- 286 (333)
T ss_pred ---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC--
Confidence 5677777665 37999999998666689999999997 9999999754 345677677778999999986322
Q ss_pred ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
..+++.+++++.++.+. +++ +.|+++++.+|++.+.+++. +|+|++
T Consensus 287 -~~~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 -ALDSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred -HHHHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 35788889998888554 445 68999999999999998776 599875
No 37
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.1e-44 Score=343.09 Aligned_cols=361 Identities=43% Similarity=0.700 Sum_probs=296.5
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++.++++.++|.|++++++|+||+.++++|++|+..+.|.++ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 79999999987899999999999999999999999999999998888665 35678999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|+..+..+|++|.+|++++.+.|...... -.|.-.++..++.. -|.......+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFTA-DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCcccccc-cCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999754210 00000000000000 0000000123469999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
++++.+++.+.|||.+++...++.++++|||+|+|++|++++++|+..|+++|+++++++++.++++.+|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999998888888999999999988999999999999999955999999999999999999999998877
Q ss_pred CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC
Q 016507 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (388)
.++...+.+++.+ ++|++||+++....+..++++++++ |+++.+|.........++...+..++..+.++.+....
T Consensus 237 --~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (363)
T cd08279 237 --DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN 313 (363)
T ss_pred --ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcC
Confidence 6777888888765 8999999999766689999999997 99999986543345567776666678888887654433
Q ss_pred ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEE
Q 016507 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 384 (388)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv 384 (388)
..+.++++++++.++.+.+..++.++|+++++++|++.+.+++..|.||
T Consensus 314 ~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 314 PRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 4567899999999998876666789999999999999998877666655
No 38
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=3e-45 Score=341.86 Aligned_cols=303 Identities=19% Similarity=0.278 Sum_probs=244.0
Q ss_pred ceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccC-cccccccccCCCC---CCCCcccccceeEEEEEecCCCCC
Q 016507 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLC-HSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG 91 (388)
Q Consensus 16 ~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~v~G~e~~G~Vv~vG~~v~~ 91 (388)
+|||+++.+++. ++++++|.|+|+++||||||.+++|| ++|++.+.|.++. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 479999998876 99999999999999999999999996 7999988887643 3579999999999999999998 6
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 016507 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (388)
Q Consensus 92 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP 171 (388)
|++||||++. |..|..|..+ . .|+|+||+.++.+.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~~-----------------~-------------------~G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVRG-----------------L-------------------FGGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Cccccccccc-----------------c-------------------CCcccceEEcCHHHceeCC
Confidence 9999999863 2233222110 0 1499999999999999999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
++++++. +.++ .+.|||+++.+ . ..++++|||+|+|++|++++|+|+++|++.|++++.++++++.+..+ +++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999864 5555 57899997644 3 34688999999999999999999999996677787777777665543 455
Q ss_pred cCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
|+.+ . .+.++|+||||+|+...+..++++++++ |+++.+|... ....+++..++.+++++.++..
T Consensus 192 ~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~~~~~ 256 (308)
T TIGR01202 192 DPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYT--EPVNFDFVPAFMKEARLRIAAE 256 (308)
T ss_pred Chhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecC--CCcccccchhhhcceEEEEecc
Confidence 5432 1 1238999999999987789999999997 9999999753 2345666677788899888753
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCc-eeEEEEe
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-CLRCVIW 385 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~kvvv~ 385 (388)
.. .++++++++++++|++++.++++++|||+|+++|++.+.++. .+|++|+
T Consensus 257 ~~---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 257 WQ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cc---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 22 467999999999999999889999999999999999876654 4699874
No 39
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=5.3e-44 Score=339.30 Aligned_cols=338 Identities=28% Similarity=0.417 Sum_probs=290.9
Q ss_pred eeeeeecCCCCCeEEEEeecCCC-CCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++.+++. +++.++|.|+| .++||+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999998886 99999999986 89999999999999999999998876655568899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~lP~~ 173 (388)
|+|++.+..+|+.|.+|..+..+.|....+. .|...+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLID-------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccC-------------------CeeeeEEEcccccCceEECCCC
Confidence 9999998889999999999999999865431 222223 499999999987 89999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
++..+++.+++.++|||.++....++.++++|||+|+|++|.+++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877778889999999999889999999999999994489999888999999999999999998
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
++ .++.+.+.+++.+ ++|++|||++....+..+++.++++ |+++.+|... ....+++..++.+++++.+....
T Consensus 219 ~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08286 219 AK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG--KPVDLHLEKLWIKNITITTGLVD 292 (345)
T ss_pred cc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC--CCCCcCHHHHhhcCcEEEeecCc
Confidence 76 5677788888776 8999999999877689999999997 9999999643 23556666667789998875322
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcC---ceeEEEEee
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG---KCLRCVIWM 386 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~---~~~kvvv~~ 386 (388)
.+.++.++++++++.+.+.++++++|+++++++|++.+.+. ...|+||++
T Consensus 293 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 24688899999999887777778999999999999998875 345999874
No 40
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=7.1e-44 Score=342.92 Aligned_cols=354 Identities=26% Similarity=0.390 Sum_probs=289.8
Q ss_pred eeeeeecCCCCCeEEEEeecCCCC-CCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++.++++ +++.++|.|+|. +++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 79999998865 999999999984 9999999999999999999999987665678999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCC-C---CCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEE
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-S---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVK 169 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~ 169 (388)
|+|+..+..+|+.|.+|..+..++|++..... + +|....|...+. ... ....|+|++|+.++.+ .+++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYS----HLT--GGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccc----ccc--CCCCCeeEEEEEcccccCeEEE
Confidence 99999888899999999999999998654321 0 111100000000 000 0113699999999987 8999
Q ss_pred cCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 170 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
+|+++++++|++++..++|||+++ ..+++.++++|||+|+|++|++++++|+..|+.+|+++++++++.+++++++...
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 232 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence 999999999999999999999987 7888999999999988999999999999999856999999999999999984446
Q ss_pred EEcCCCCCCc-cHHHHHHhhcCC-CccEEEEccCCH---------------------HHHHHHHHHhhcCCceEEEEccC
Q 016507 250 FVNSKNCGDK-SVSQIIIDMTDG-GADYCFECVGLA---------------------SLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 250 v~~~~~~~~~-~~~~~i~~~~~g-~~dvvid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
+++..+ . ++.+.+++++.+ ++|++|||+|+. ..+..++++++++ |+++.+|..
T Consensus 233 vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~ 308 (386)
T cd08283 233 TINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVY 308 (386)
T ss_pred EEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCC
Confidence 777765 4 478888888877 899999999753 3478899999997 999999875
Q ss_pred CCCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCc--eeEEEE
Q 016507 307 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVI 384 (388)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kvvv 384 (388)
... ...++....+.+++.+.+.... ..+.++++++++.++++.+.+++++.|+++++++|++.+.++. .+|+||
T Consensus 309 ~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 384 (386)
T cd08283 309 GGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVL 384 (386)
T ss_pred CCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEe
Confidence 332 3445655667788888887422 2457889999999998877667789999999999999988776 359998
Q ss_pred ee
Q 016507 385 WM 386 (388)
Q Consensus 385 ~~ 386 (388)
++
T Consensus 385 ~~ 386 (386)
T cd08283 385 KP 386 (386)
T ss_pred cC
Confidence 63
No 41
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.3e-43 Score=335.86 Aligned_cols=333 Identities=29% Similarity=0.447 Sum_probs=287.1
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC---CCCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++.+++.++++.+.+.|++.+++|+||+.++++|++|+....|.++ ...+|.++|+|++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 69999998877799999999999999999999999999999998887654 345688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+..+...|+.|..|+.+.+++|.+... .|+..+| +|++|+.++.++++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence 99999998888999999999999999988775 4444444 9999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHh-cCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| + +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999987665 46888999999999789999999999999 6 899998999999999999999999
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 016507 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (388)
++++ . +.+.+++++++ ++|+++|++|+......++++++++ |+++.+|.... ..++....+.+++.+.+..
T Consensus 218 ~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~ 289 (340)
T cd05284 218 NASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSL 289 (340)
T ss_pred cCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEe
Confidence 9876 5 78888888876 8999999999866689999999997 99999986432 3444444456788888875
Q ss_pred ecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 331 FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. ..+.+.++++++.++.+.+ ..+.|+++++++|++.+.+++. +|+|+.+
T Consensus 290 ~~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 290 WG---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred cc---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 33 2457889999999997654 3478999999999999988765 4888753
No 42
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.9e-43 Score=336.07 Aligned_cols=335 Identities=26% Similarity=0.430 Sum_probs=281.7
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC---------CCCCcccccceeEEEEEecC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---------AVFPRILGHEAIGVVESVGE 87 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---------~~~p~v~G~e~~G~Vv~vG~ 87 (388)
|||+++++++. +++++++.|++.+++|+||+.++++|++|+..+.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999998886 999999999999999999999999999999988875311 14577899999999999999
Q ss_pred CCC--CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC
Q 016507 88 NVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (388)
Q Consensus 88 ~v~--~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 165 (388)
+++ .|++||+|+..+..+|+.|..|..+..+.|.... .+|+... ..|+|++|+.++.+
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~-----------------~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQNN-----------------VNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeeccC-----------------CCCcceeeEEcccc
Confidence 999 8999999999999999999999999999996432 2333110 12499999999988
Q ss_pred -ceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH
Q 016507 166 -HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (388)
Q Consensus 166 -~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 244 (388)
.++++|+++++++++.+ .++.|+|.++ +.+++.++++|||.|+|.+|++++++|+.+|+..|+++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 57899999999999988 7999999986 77899999999997779999999999999998678889999999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHH-Hhc
Q 016507 245 FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV-LHS 322 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~ 322 (388)
+|++++++.++ .++.+.+.+++++ ++|++||++|....+..++++++++ |+++.+|.... ...++...+ ..+
T Consensus 218 ~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~ 291 (350)
T cd08256 218 FGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGD--PVTVDWSIIGDRK 291 (350)
T ss_pred cCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCC--CCccChhHhhccc
Confidence 99999998876 6788888888877 8999999999766688999999997 99999986432 233443333 346
Q ss_pred CcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 323 GKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
++++.++.... ..+.+++++++++.+.+.+++.+.|+++++++|++.+++++. +|+|+
T Consensus 292 ~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 292 ELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred ccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 77777765432 468899999999988776567899999999999999988764 48774
No 43
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.2e-43 Score=335.23 Aligned_cols=341 Identities=29% Similarity=0.430 Sum_probs=285.5
Q ss_pred eeeeeecCCCCCeEEEEeecCCC-CCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++.+++. +.+.+.|.|.| .+++|+||+.++++|++|++.+.|.++..++|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998887 88999999999 99999999999999999999998877656678999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~lP~~ 173 (388)
|+|+..+...|+.|.+|..+...+|.......+.|. ...|+|++|+.++.+ +++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999976443211111 123599999999987 89999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++++++.+++.+.|||+++ ...+++++++|||.|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999986 67889999999998889999999999999996578888888889999999999999998
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
++ .++.+.+++.+++ ++|++||++++...+..++++++++ |+++.+|........... ...+.+++.+.+....
T Consensus 220 ~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 294 (347)
T cd05278 220 KN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLL-GEWFGKNLTFKTGLVP 294 (347)
T ss_pred Cc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCcc-chhhhceeEEEeeccC
Confidence 77 6688888888776 8999999999855589999999997 999999864322111111 2233567777765322
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce--eEEEEee
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWM 386 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvv~~ 386 (388)
. .+.++++++++.++.+.+..++...|+++++.+|++.+..++. .|+|+++
T Consensus 295 ~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 295 V---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred c---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 1 4678899999999988765556789999999999999887665 4888763
No 44
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.1e-43 Score=307.03 Aligned_cols=320 Identities=21% Similarity=0.282 Sum_probs=265.1
Q ss_pred CCCcceeeeeecCCCCC---eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecC
Q 016507 12 GKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGE 87 (388)
Q Consensus 12 ~~~~~~ka~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~ 87 (388)
.++...|+++|.+.+.| ++++++++|....++|+||.+|++|||+|+..++|.|+. +++|.+-|+|++|+|+++|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 45666899999999988 888999999887888999999999999999999999987 67899999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 016507 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (388)
Q Consensus 88 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~ 167 (388)
++++|++||+|+... -+.|.|++|.+.+++.+
T Consensus 95 ~vkgfk~Gd~VIp~~------------------------------------------------a~lGtW~t~~v~~e~~L 126 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLS------------------------------------------------ANLGTWRTEAVFSESDL 126 (354)
T ss_pred CcCccCCCCeEeecC------------------------------------------------CCCccceeeEeecccce
Confidence 999999999998532 22469999999999999
Q ss_pred EEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHH----HHH
Q 016507 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF----EIG 242 (388)
Q Consensus 168 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~----~~~ 242 (388)
+++++.++++.||++.++.+|||.+|....++.+||+|+-.|| +++|.+.+|+|++.|++.|-++ |+.... +.+
T Consensus 127 i~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~L 205 (354)
T KOG0025|consen 127 IKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQL 205 (354)
T ss_pred EEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHH
Confidence 9999999999999999999999999988999999999999998 9999999999999999555555 555433 345
Q ss_pred HHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhc
Q 016507 243 KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 322 (388)
Q Consensus 243 ~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 322 (388)
+.+||++|+...+.......... ....++.+.|+|+|+.. .....+.|.++ |+++.||+ ++.++++++...++.|
T Consensus 206 k~lGA~~ViTeeel~~~~~~k~~--~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGG-MSkqPv~~~ts~lIFK 280 (354)
T KOG0025|consen 206 KSLGATEVITEEELRDRKMKKFK--GDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGG-MSKQPVTVPTSLLIFK 280 (354)
T ss_pred HHcCCceEecHHHhcchhhhhhh--ccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecC-ccCCCcccccchheec
Confidence 66999999965442111111111 11228999999999998 77889999998 99999999 5788999999999999
Q ss_pred CcEEEEeeecCCCcc--------CcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce--eEEEEeeC
Q 016507 323 GKILMGSLFGGLKAK--------SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWMG 387 (388)
Q Consensus 323 ~~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvv~~~ 387 (388)
++.++|+|+..|... +.+.++.+++.+|++... -.+..+|++...|++...+... +|.++.++
T Consensus 281 dl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 281 DLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred cceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 999999999988642 245678889999976544 4467899999999886655433 36666654
No 45
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.1e-42 Score=330.36 Aligned_cols=340 Identities=28% Similarity=0.405 Sum_probs=290.3
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++..++.++++.+.|.|.+.+++|+||+.++++|++|+....|..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998887799999999999999999999999999999999888766556688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCCC
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~lP~~~ 174 (388)
+|+..+...|+.|..|+.|..++|.+... .|+..+ |+|++|+.++.. +++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHP-------------------GSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccCCC-------------------CcceeEEEcccccCceEECCCCC
Confidence 99887778899999999999999997543 233223 499999999974 899999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
++++++.+++.+.|||+++....++.++++|+|+|+|++|++++++|+..|+ +|+++.+++++.+.++++|++++++.+
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999988777889999999999999999999999999999 899999999999999999999999876
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCc-cccCHHHHHhcCcEEEEeeecC
Q 016507 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVLHSGKILMGSLFGG 333 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~i~g~~~~~ 333 (388)
+ ..++.+.+.++..+++|++|||+|+......++++++++ |+++.+|....... ..+++..++.+++.+.+....
T Consensus 218 ~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (345)
T cd08260 218 E--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM- 293 (345)
T ss_pred c--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC-
Confidence 4 135667777776668999999999766688999999997 99999987432222 455666666778888887532
Q ss_pred CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 334 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
..+.++.++++++++++.+.+++.+.++++++++|++.+.+++. +|+|++
T Consensus 294 --~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 --PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred --CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 24678899999999988766667899999999999999988765 487764
No 46
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=9.7e-43 Score=331.30 Aligned_cols=336 Identities=27% Similarity=0.375 Sum_probs=284.6
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC------------CCCCCcccccceeEEEEE
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF------------PAVFPRILGHEAIGVVES 84 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~------------~~~~p~v~G~e~~G~Vv~ 84 (388)
|||+++..++.++++.++|.|+++++||+||+.++++|++|++.+.|.++ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 79999988888799999999999999999999999999999998887643 224567899999999999
Q ss_pred ecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 016507 85 VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (388)
Q Consensus 85 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 164 (388)
+|++++.+++||+|+..+...|++|..|.++.++.|....+ .|.... |+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD-------------------GGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------------CcceeeEEecH
Confidence 99999999999999999999999999999999999976432 222222 49999999999
Q ss_pred CceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH
Q 016507 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (388)
Q Consensus 165 ~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 244 (388)
++++++|+++++.+++.+.+.+.|||+++.....+.++++|||+|+|++|++++|+|+..|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999987666666789999999889999999999999999778999899999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCc
Q 016507 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK 324 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 324 (388)
+|++.+++.++ ..+.+.+.+..++++|++||++|....+..++++++++ |+++.+|..... ...+......++.
T Consensus 219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~ 292 (350)
T cd08240 219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGE--ATLPLPLLPLRAL 292 (350)
T ss_pred hCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCC--CcccHHHHhhcCc
Confidence 99999988776 56777777776668999999999766699999999997 999999875432 2233333445788
Q ss_pred EEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 325 ILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
.+.++.... .+++.+++++++++.+.+. ..+.|+++++++|++.+.+++. +|++++
T Consensus 293 ~i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 293 TIQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 888876443 2678899999999976543 5678999999999999887664 488875
No 47
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.3e-43 Score=330.94 Aligned_cols=310 Identities=18% Similarity=0.199 Sum_probs=258.9
Q ss_pred eeeeeecCCCCC-----eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCC
Q 016507 17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (388)
Q Consensus 17 ~ka~~~~~~~~~-----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~ 90 (388)
|||+++.+++.| +++.++|.|.|+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 689999988753 788899999999999999999999999999999887643 45689999999999999999999
Q ss_pred C-CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEE
Q 016507 91 G-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (388)
Q Consensus 91 ~-~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~ 169 (388)
+ |++||+|+..+. .+ |+|++|+.++.+.+++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~~-------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------SY-------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------CC-------------------CcchheeeecHHHeEE
Confidence 6 999999974210 01 4999999999999999
Q ss_pred cCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEE-c-cchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC
Q 016507 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-G-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (388)
Q Consensus 170 lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~-G-ag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga 247 (388)
+|+++++++++++++.++|||. +...... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++.++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 9999999999988889999985 4455555 55666665 5 59999999999999999 89999999999999999999
Q ss_pred cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEE
Q 016507 248 TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL 326 (388)
Q Consensus 248 ~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i 326 (388)
++++++++ .++.+.+++++.+ ++|++||++|+.. ....+++++++ |+++.+|.........++...++.+++++
T Consensus 190 ~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08291 190 EYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSI 264 (324)
T ss_pred cEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEE
Confidence 99999887 7788889988887 8999999999887 67889999997 99999997533222235666777889999
Q ss_pred EEeeecCCCc---cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 327 MGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 327 ~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
.+++...+.. .+++++++++++ + .++++++++|+|+|+.+|++.+.+++. +|++|.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 265 EGFWLTTWLQKLGPEVVKKLKKLVK-T--ELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEEHHHhhcccCHHHHHHHHHHHh-C--ccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 9987655421 345778888887 6 456678999999999999999988654 699873
No 48
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2e-42 Score=328.51 Aligned_cols=336 Identities=27% Similarity=0.418 Sum_probs=283.3
Q ss_pred eeeeeecCCCCCeEEEEeecCCC-CCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++.++++ +++.+.|+|+| +++||+||+.++++|++|+..+.|.++. .+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 68999998876 99999999996 8999999999999999999988887643 457899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~lP~~ 173 (388)
|+|+..+...|+.|.+|..++.++|....+ .|...+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCC
Confidence 999886778899999999999999986543 4433444 99999999975 99999999
Q ss_pred CCccccc-----cccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc
Q 016507 174 VPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (388)
Q Consensus 174 ~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~ 248 (388)
+++..+. .+...+.||+.++ ..+.+.++++|+|.|+|++|++++++|+.+|++.++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9882221 2225678888875 577899999999988899999999999999996689998888899999999999
Q ss_pred EEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEE
Q 016507 249 EFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 327 (388)
Q Consensus 249 ~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 327 (388)
+++++++ ..+.+.+.+.+++ ++|+++||+|+...+..++++++++ |+++.+|... ....++....+.+++.+.
T Consensus 216 ~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~~~~~~~~~~~ 289 (345)
T cd08287 216 DIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPH--GGVELDVRELFFRNVGLA 289 (345)
T ss_pred eEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccC--CCCccCHHHHHhcceEEE
Confidence 9999887 6788888888777 8999999999877799999999997 9999998654 234566555677899988
Q ss_pred EeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 328 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
+.... ..+.++++++++.++.+.+.+++++.++++++++|++.+.+.+..|++|++
T Consensus 290 ~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 290 GGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred EecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 75322 235789999999999887766678999999999999998887767999863
No 49
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.9e-42 Score=331.30 Aligned_cols=359 Identities=30% Similarity=0.468 Sum_probs=293.1
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCC---CC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG---VV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~---~~ 93 (388)
|||+++..++.++++.+.|.|.++++||+||+.++++|++|+.+..+.++. .+|.++|||++|+|+++|+++++ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999998767899999999999999999999999999999988887654 56889999999999999999988 99
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCC-CCCCCCCCCCccccccCCceecc--cccccceeeeEEeecCceEEc
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISPWMPRDQTSRFKDLRGETIHH--FVSVSSFSEYTVLDIAHVVKV 170 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~-~~~g~~~~g~~~~~~~~~~~~~~--~~~~g~~a~~~~~~~~~~~~l 170 (388)
+||+|+..+..+|+.|..|..+++++|....+- ...|...+|...+. +....+ ....|+|++|+.++.+.++++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLF---RLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCccccc---ccCCCccccccCCcceeEEEechhhEEEC
Confidence 999999988899999999999999999864310 00010111100000 000000 012469999999999999999
Q ss_pred CCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE
Q 016507 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (388)
Q Consensus 171 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v 250 (388)
|+++++.+++.+++.+.|||.++.....+.++++|||+|+|++|++++++|+..|+.+|+++++++++.++++++|++.+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v 236 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT 236 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence 99999999999999999999988777888999999999889999999999999999559999889999999999999999
Q ss_pred EcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 016507 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (388)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (388)
++.++ .++.+.+++.+++ ++|++||++++......++++++++ |+++.+|.........++...++.+++.+.++
T Consensus 237 ~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 237 VNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred ecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 99877 6788888888766 8999999999974489999999997 99999986543334456666665778888775
Q ss_pred eecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 330 LFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
+. ....+.+++++++++++.+.+..++++.|+++++.+|++.+.+++. +|+||.
T Consensus 313 ~~--~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 313 YG--ARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CC--CCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 32 2223578899999999987766667899999999999999988775 488873
No 50
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.2e-42 Score=335.58 Aligned_cols=342 Identities=18% Similarity=0.211 Sum_probs=280.8
Q ss_pred CCcceeeeeecC--CCC---CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC----------CCCCCcccccc
Q 016507 13 KPIQCRAAIATA--PGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFPRILGHE 77 (388)
Q Consensus 13 ~~~~~ka~~~~~--~~~---~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~v~G~e 77 (388)
.|.+|||+++.. .+. .++++++|.|.++++||+||+.+++||++|++...|... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 577899998853 222 378889999999999999999999999999988776411 01123589999
Q ss_pred eeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 016507 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157 (388)
Q Consensus 78 ~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 157 (388)
++|+|+++|++++.|++||+|+..+...|+.|..|..+..++|....+ +|+.. ..|+|+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~------------------~~g~~a 147 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYET------------------NYGSFA 147 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccC------------------CCCcce
Confidence 999999999999999999999999899999999999999999975433 44321 124999
Q ss_pred eeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHh--cCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcC
Q 016507 158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV 234 (388)
Q Consensus 158 ~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~ 234 (388)
+|+.++..+++++|+++++++++.+.+.+.|||+++... ++++++++|||+|+ |++|++++++|+.+|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999987654 67899999999997 9999999999999999 7888888
Q ss_pred CchHHHHHHHcCCcEEEcCCCCC-------------------CccHHHHHHhhcCC--CccEEEEccCCHHHHHHHHHHh
Q 016507 235 ISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG--GADYCFECVGLASLVQEAYACC 293 (388)
Q Consensus 235 ~~~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~i~~~~~g--~~dvvid~~g~~~~~~~~~~~l 293 (388)
++++.++++++|++++++.++.+ ...+.+.+.+++++ ++|++|||+|+.. +..+++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHh
Confidence 99999999999999999875410 01356777888776 6999999999854 89999999
Q ss_pred hcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHH
Q 016507 294 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 373 (388)
Q Consensus 294 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~ 373 (388)
+++ |+++.+|.... ....++...++.++.++.+++... .+++.+++++++++.+. +.++++|+++++++|++.
T Consensus 306 ~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~ 378 (393)
T cd08246 306 DRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRID--PCLSKVFSLDETPDAHQL 378 (393)
T ss_pred ccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCce--eeeeEEEeHHHHHHHHHH
Confidence 997 99999986432 234556666777788888875443 35788999999999665 347799999999999999
Q ss_pred HhcC-ce-eEEEE
Q 016507 374 LIKG-KC-LRCVI 384 (388)
Q Consensus 374 ~~~~-~~-~kvvv 384 (388)
+.++ .. +|+|+
T Consensus 379 ~~~~~~~~gkvvv 391 (393)
T cd08246 379 MHRNQHHVGNMAV 391 (393)
T ss_pred HHhCccccceEEE
Confidence 9877 44 58776
No 51
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.1e-42 Score=326.66 Aligned_cols=337 Identities=23% Similarity=0.380 Sum_probs=279.4
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCC---CCCCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
||++++.++++.+++.+.|.|.|.++||+||+.++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999888779999999999999999999999999999998766531 1234678899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+..+..+|+.|.+|..+..++|....+ .+...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRP-------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCC-------------------CcceeeEEechHHeEECcCC
Confidence 99999999999999999999999999975432 222233 49999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++.+++.+ ..+.+++.++.. ...+|++|+|.|+|++|++++++|+.+|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888755 466666655432 34689999999889999999999999999668888888999999999999999988
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
++ .++.+.+++++++ ++|++|||.|+...+..++++++++ |+++.+|.... ...++...+..+++.+.++...
T Consensus 216 ~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~ 289 (341)
T PRK05396 216 AK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGR 289 (341)
T ss_pred cc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEcc
Confidence 77 6788888888876 8999999999887789999999997 99999987542 2344456666778888876522
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEeeC
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 387 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~~ 387 (388)
. ..+.+..+++++.++ +.+.+++.+.|+++++++|++.+.++..+|+|++++
T Consensus 290 ~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 290 E--MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred C--ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 2 134566788888888 556566789999999999999988776569999764
No 52
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=4e-42 Score=329.76 Aligned_cols=347 Identities=24% Similarity=0.327 Sum_probs=282.6
Q ss_pred eeeeeecCCCCCeEEEEeecCCC-CCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
||++++.+++. ++++++|+|++ +++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 68999988874 99999999996 799999999999999999999988765 3568899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~lP~~ 173 (388)
|+|+..+..+|+.|..|+.++.++|...... ++....|.... ....|+|++|+.++.. .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG--RAGGAYGYVDM----------GPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc--ccccccccccc----------CCCCCeeeeEEEeecccCcEEECCCC
Confidence 9999999999999999999999999764321 00000010000 0012599999999976 89999999
Q ss_pred CCcc---ccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE
Q 016507 174 VPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (388)
Q Consensus 174 ~~~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v 250 (388)
++++ +++.+.+.++|||+++ ..+++.+|++|||.|+|++|++++|+|++.|+.+|+++++++++.++++++|+. .
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-P 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-E
Confidence 9998 5678888999999987 778899999999988899999999999999976788899999999999999984 5
Q ss_pred EcCCCCCCccHHHHHHhhcCCCccEEEEccCCHH-----------HHHHHHHHhhcCCceEEEEccCCCC----------
Q 016507 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-----------LVQEAYACCRKGWGKTIVLGVDQPG---------- 309 (388)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~---------- 309 (388)
+++++ .++.+.+.+++++++|++|||+|+.. .+..++++++++ |+++.+|.....
T Consensus 225 v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~ 300 (375)
T cd08282 225 IDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAK 300 (375)
T ss_pred eccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccccc
Confidence 67665 66778888776668999999998762 478999999997 999988764311
Q ss_pred -CccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 310 -SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 310 -~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
....++...++.++..+.+... ...+.++++++++.++.+.+..+++++|+++++++|++.+.++...|+|+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 301 QGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred CccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 1234566667777777766532 2246788999999999887766688999999999999999887755998863
No 53
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=7.8e-42 Score=324.28 Aligned_cols=339 Identities=26% Similarity=0.400 Sum_probs=282.4
Q ss_pred eeeeeecCCCCCeEEEEeecCCCC-CCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++..++. ++++++|+|+|. ++||+||+.++++|++|+....|.++ ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 68999988764 999999999985 99999999999999999998888654 3457889999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC--ceEEcCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~lP~~ 173 (388)
|+|+..+..+|+.|.+|++++.+.|+.... +|.. + .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~-------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYA--G-------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccc--c-------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 999988889999999999999999975421 2110 0 00113599999999864 99999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++++++.+++++.|||+++. ...+.++++|||+|+|++|++++++|+.+|+.+|+++++++++.++++++|+. +++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999874 47889999999998899999999999999975799998888999999999986 4666
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
+. .++.+.+.+++++ ++|++|||+++...+..++++++++ |+++.+|.... ..........+.+++.+.+..
T Consensus 219 ~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~-- 291 (344)
T cd08284 219 ED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFGR-- 291 (344)
T ss_pred CC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEec--
Confidence 55 5677888888876 8999999999876689999999997 99999997542 233445556677788877542
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEe
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 385 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~ 385 (388)
....+.++.+++++.++.+.+.+++.+.|+++++++|++.+.++..+|+|++
T Consensus 292 -~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 -CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred -CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 2235678999999999988766667899999999999998887655788875
No 54
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.8e-41 Score=321.00 Aligned_cols=334 Identities=29% Similarity=0.521 Sum_probs=283.9
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++..++. +++.+++.|+++++||+|||.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999998875 89999999999999999999999999999999888765555688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|+..+...|+.|..|..++.+.|...+. .++... |+|++|+.++.+ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRD-------------------GGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCC-------------------CcceeEEEechh-eEECCCCCCH
Confidence 99988888999999999999999953322 222222 499999999999 9999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
++++++ ..+.+++.++ ...++.++++|||+|+|.+|.+++++|+.+|+ +|+++.+++++.++++++|+++++++++
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999887 4778888865 77889999999999889999999999999999 8999988999999999999999999887
Q ss_pred CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC
Q 016507 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (388)
.++.+.+.+++++ ++|++|||+|+...+..++++++++ |+++.+|... ....++...+..+++.+.+.. ..
T Consensus 213 --~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~---~~ 284 (337)
T cd08261 213 --EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSR---NA 284 (337)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEec---cC
Confidence 6788888888777 8999999998876689999999997 9999998653 334455556666788887763 22
Q ss_pred ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCc-e-eEEEEee
Q 016507 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C-LRCVIWM 386 (388)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kvvv~~ 386 (388)
..+.++++++++.++.+.+.+.+...++++++++|++.+.+++ . +|+|+++
T Consensus 285 ~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 285 TREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred ChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 3457889999999998776334778999999999999998763 4 5999874
No 55
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=5.8e-42 Score=323.84 Aligned_cols=331 Identities=27% Similarity=0.382 Sum_probs=279.3
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++++++++++|.|.+.++|++||+.++++|++|++...|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 68999999998899999999999999999999999999999998888766556688999999999999999998999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|++.+..+|+.|.+|..+..+.|..... .|...+| +|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCH
Confidence 99998888999999999999999987543 3433344 9999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
.+++.+++.+.+||+++... .+.++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++ ++++++.+
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987554 8999999999997 9999999999999999 899999999999999888 77776543
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC
Q 016507 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (388)
.+.+.++++ +++|++|||+|+.. ...++++++++ |+++.+|.........+.....+.+++++.+... .
T Consensus 215 ----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 283 (334)
T PRK13771 215 ----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---A 283 (334)
T ss_pred ----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---C
Confidence 245556554 37999999999875 88999999997 9999999753322222344444567888887742 2
Q ss_pred ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
..++++++++++.++.+. +++.+.|+++++++|++.+.++.. +|+++++
T Consensus 284 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 TKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 346789999999999664 447799999999999999987654 5988865
No 56
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.4e-41 Score=322.44 Aligned_cols=337 Identities=28% Similarity=0.431 Sum_probs=286.0
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++. +.+++.+.|++.+++|+||+.++++|+.|+.++.|.++...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999988875 99999999999999999999999999999998888764344577899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc-----eEEcC
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-----VVKVD 171 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-----~~~lP 171 (388)
+|+..++..|+.|..|..++.++|..... +|.... |+|++|+.++.++ ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYD-------------------GGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---eccCCC-------------------CcceeeEEecccccccccEEECC
Confidence 99999999999999999999999976553 333333 4999999999988 99999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
+++++.+|+.+ +.+.+||+++. ..++.++++|||+|+|.+|++++++|+..|++.|+++.+++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999999876 68899999774 45899999999998899999999999999994399998899999999899999999
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 016507 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (388)
++++ .++.+.+++.+.+ ++|++|||+++...+..++++++++ |+++.+|.........++...+..+++.+.+..
T Consensus 216 ~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (343)
T cd08235 216 DAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSY 291 (343)
T ss_pred cCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEe
Confidence 9887 6788888888777 8999999999876689999999997 999999865433334555566667788887765
Q ss_pred ecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEe
Q 016507 331 FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 385 (388)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~ 385 (388)
.. ..+.++.+++++.++.+.+.+.+...|+++++.+|++.+.+++.+|+|++
T Consensus 292 ~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 292 AA---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred cC---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 32 23578889999999987654557789999999999999988774488873
No 57
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=9.6e-42 Score=328.04 Aligned_cols=340 Identities=22% Similarity=0.355 Sum_probs=278.3
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCC------C-CCCCCcccccceeEEEEEecC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD------F-PAVFPRILGHEAIGVVESVGE 87 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~v~G~e~~G~Vv~vG~ 87 (388)
.++.+.++..+ .++++++|.|++++++|+||+.++++|++|++.+.+.. + ...+|.++|||++|+|+++|+
T Consensus 27 ~~~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 104 (384)
T cd08265 27 TNLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGK 104 (384)
T ss_pred ccceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECC
Confidence 34556666654 39999999999999999999999999999998876321 1 134678999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 016507 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (388)
Q Consensus 88 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~ 167 (388)
+++.|++||+|+..+..+|+.|..|..++.++|..... .|+..+| +|++|+.++.+.+
T Consensus 105 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~ 162 (384)
T cd08265 105 NVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYA 162 (384)
T ss_pred CCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHe
Confidence 99999999999999999999999999999999986553 4443344 9999999999999
Q ss_pred EEcCCCC-------CccccccccchhhhhHHHHHHh-cCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHH
Q 016507 168 VKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF 239 (388)
Q Consensus 168 ~~lP~~~-------~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 239 (388)
+++|+++ +.. ++++..++.+||+++... .++++|++|||+|+|++|++++++|+.+|+.+|+++++++++.
T Consensus 163 ~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~ 241 (384)
T cd08265 163 WEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERR 241 (384)
T ss_pred EECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 9999864 344 556666889999987665 6899999999998899999999999999987799999888999
Q ss_pred HHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCH-HHHHHHHHHhhcCCceEEEEccCCCCCccccCHH
Q 016507 240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF 317 (388)
Q Consensus 240 ~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 317 (388)
++++++|+++++++++....++.+.+.+++.+ ++|+|+|++|.. ..+..++++++++ |+++.+|.... ...+++.
T Consensus 242 ~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~ 318 (384)
T cd08265 242 NLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLE 318 (384)
T ss_pred HHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHH
Confidence 99999999999987751113678888888887 899999999973 4578999999997 99999986432 3445555
Q ss_pred HHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEE
Q 016507 318 EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 384 (388)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv 384 (388)
.+..+..++.+.+... ....++++++++.++.+.+..++++.|+++++++|++.+.++..+|+|+
T Consensus 319 ~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 319 VLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred HHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 5666677888775322 2346899999999998877666789999999999999977766568775
No 58
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1e-41 Score=320.10 Aligned_cols=317 Identities=23% Similarity=0.369 Sum_probs=269.1
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++. ++++++|.|+++++||+||+.++++|++|+....|..+ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 68999998764 99999999999999999999999999999998888653 5788999999999999997 78999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
+|...+..+|+.|.+|..+..+.|..... .+.. .+ |+|++|+.++.++++++|++++
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~ 131 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD-------------------GAFAEYLTLPLENLHVVPDLVP 131 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC-------------------CceEEEEEechHHeEECcCCCC
Confidence 99999999999999999999999886543 2321 23 4999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
.++++.+ ..+.+++. +.+..++.++++|||+|+|.+|++++|+|+.+|+ +|++++.++++.++++++|++.+++.++
T Consensus 132 ~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~ 208 (319)
T cd08242 132 DEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA 208 (319)
T ss_pred HHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc
Confidence 9888864 35556665 5577889999999999889999999999999999 7999999999999999999998887654
Q ss_pred CCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 256 CGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
. +.+ ++|++|||+|+...+..++++++++ |+++..+... ....++...+..++.++.+.+..
T Consensus 209 ---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~-- 271 (319)
T cd08242 209 ---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA--GPASFDLTKAVVNEITLVGSRCG-- 271 (319)
T ss_pred ---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC--CCCccCHHHheecceEEEEEecc--
Confidence 1 233 8999999999876689999999997 9999877533 33456666667778888887532
Q ss_pred CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 335 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
.+++++++++++++++.+++++.|+++++++||+.+.++..+|+||++
T Consensus 272 ----~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 272 ----PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred ----cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 378899999999887667788999999999999999877767999863
No 59
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.1e-41 Score=329.14 Aligned_cols=345 Identities=21% Similarity=0.235 Sum_probs=281.1
Q ss_pred CCcceeeeeecC--CCC---CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC----------CCCCC-ccccc
Q 016507 13 KPIQCRAAIATA--PGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFP-RILGH 76 (388)
Q Consensus 13 ~~~~~ka~~~~~--~~~---~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~v~G~ 76 (388)
.|.+|||+++.. +++ .+++.++|.|.|.+++|+||+.++++|++|++...+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 467799999954 443 388899999999999999999999999999876655321 11223 37999
Q ss_pred ceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccce
Q 016507 77 EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF 156 (388)
Q Consensus 77 e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~ 156 (388)
|++|+|+++|++++.|++||+|+..+...|+.|.+|+.++.++|..... .|... ..|+|
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~------------------~~g~~ 142 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYET------------------NFGSF 142 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccC------------------CCccc
Confidence 9999999999999999999999999999999999999999999965332 22211 12499
Q ss_pred eeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHH--hcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEc
Q 016507 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (388)
Q Consensus 157 a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~ 233 (388)
++|+.++.++++++|+++++++++.+.+.+.|||.++.. ..++.++++|||+|+ |++|++++++|+.+|+ ++++++
T Consensus 143 ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~ 221 (398)
T TIGR01751 143 AEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVV 221 (398)
T ss_pred eEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEc
Confidence 999999999999999999999999999999999998654 467899999999997 9999999999999999 788888
Q ss_pred CCchHHHHHHHcCCcEEEcCCCCC-------------------CccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHh
Q 016507 234 VISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACC 293 (388)
Q Consensus 234 ~~~~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l 293 (388)
+++++.++++++|++.++|+++.+ ...+.+.+.+++++ ++|++|||+|... +..+++++
T Consensus 222 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l 300 (398)
T TIGR01751 222 SSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVC 300 (398)
T ss_pred CCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhh
Confidence 888999999999999999875410 01255667777776 8999999999755 88999999
Q ss_pred hcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHH
Q 016507 294 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 373 (388)
Q Consensus 294 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~ 373 (388)
+++ |+++.+|... .....++...++.++..+.++....+ .++++++++++++.+. +.+++++++++++++++.
T Consensus 301 ~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~--~~~~~~~~l~~~~~a~~~ 373 (398)
T TIGR01751 301 RRG-GMVVICGGTT-GYNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRID--PTLSKVYPLEEIGQAHQD 373 (398)
T ss_pred ccC-CEEEEEcccc-CCCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCcc--cceeeEEcHHHHHHHHHH
Confidence 997 9999999753 22345566666677788887754432 4578899999999665 347899999999999999
Q ss_pred HhcCce-eEEEEeeC
Q 016507 374 LIKGKC-LRCVIWMG 387 (388)
Q Consensus 374 ~~~~~~-~kvvv~~~ 387 (388)
+.++.. +|+|+++.
T Consensus 374 ~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 374 VHRNHHQGNVAVLVL 388 (398)
T ss_pred HHcCCCCceEEEEeC
Confidence 987765 49998764
No 60
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=3.3e-41 Score=322.39 Aligned_cols=339 Identities=27% Similarity=0.446 Sum_probs=273.3
Q ss_pred cceeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC---CCCCCcccccceeEEEEEecCCCCC
Q 016507 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG 91 (388)
Q Consensus 15 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~ 91 (388)
.+|+++++.+++. +++++.+.|++.++||+||+.++++|++|++.+.+... ...+|.++|||++|+|+++|++++.
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 3455666666655 88889999999999999999999999999998876321 1235778999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 016507 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (388)
Q Consensus 92 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP 171 (388)
|++||+|+..+..+|+.|..|+.|.++.|+.... ++.. ...|+|++|+.++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~------------------~~~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATP------------------PVHGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCC------------------CCCCcccceEEcchHHeEECC
Confidence 9999999999999999999999999999976332 2211 112499999999999999999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
+++++.+++... .+.+++.++ ...++.++++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|+++++
T Consensus 154 ~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 999999887633 455577765 778899999999999899999999999999996788888889999999999999887
Q ss_pred cCCCCCCccHHHHHHhh---cCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 016507 252 NSKNCGDKSVSQIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~---~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 328 (388)
+... ...++.+.+.++ +++++|++|||+|+...+..++++++++ |+++.+|.... ...++...+..+++++.+
T Consensus 232 ~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~ 307 (364)
T PLN02702 232 LVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVG 307 (364)
T ss_pred ecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEE
Confidence 6432 014566666554 2338999999999766699999999997 99999996432 234556667778899988
Q ss_pred eeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEec--chHHHHHHHHhcCce-eEEEEe
Q 016507 329 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF--EEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
++.. ...++.++++++++.+.+.++++++|++ +++++|++.+.+++. +|+||.
T Consensus 308 ~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 308 VFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred eccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 7532 2468889999999988766667888666 799999999887654 599885
No 61
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.4e-41 Score=319.05 Aligned_cols=332 Identities=30% Similarity=0.492 Sum_probs=276.1
Q ss_pred eeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCC-C--CCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-F--PAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 19 a~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|++++++.. +++++.|.|.+.++||+|||.++++|+.|++.+.+.. . ...+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467778865 9999999999999999999999999999988764321 1 12357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
|+|+..+..+|+.|.+|+.+.+++|.+..+. .+.... |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVD-------------------GTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCC-------------------CceeeeEEecHHHcEECcCCCC
Confidence 9999989999999999999999999764321 001122 4999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
+++|+.+ ..+.+|++++ +.+.++++++|||+|+|.+|++++++|+.+|++.|+++.+++++.++++++|++++++.++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 4788999875 7889999999999988999999999999999944999988999999999999999998876
Q ss_pred CCCcc---HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 256 CGDKS---VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 256 ~~~~~---~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
.. +.+.+.+.+.+ ++|++|||+|+...+..++++++++ |+++.+|.... ...+++..+..+++.+.++..
T Consensus 217 ---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd05285 217 ---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP--EVTLPLSAASLREIDIRGVFR 290 (343)
T ss_pred ---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHhhCCcEEEEecc
Confidence 44 37778887777 8999999999875689999999997 99999986432 244555566667888877642
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCc--eeEEEE
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVI 384 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kvvv 384 (388)
. .+.++++++++.++.+.+.+++.++|+++++.+|++.+.+++ .+|++|
T Consensus 291 ~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 291 Y----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred C----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2 257889999999997765556778999999999999998875 369987
No 62
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.2e-41 Score=320.23 Aligned_cols=335 Identities=22% Similarity=0.359 Sum_probs=278.5
Q ss_pred eeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCCE
Q 016507 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (388)
Q Consensus 18 ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~ 97 (388)
|+++.+..+..+++++++.|++.++||+||+.++++|++|++.+.|......+|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 56777777766999999999999999999999999999999999887655567899999999999999999999999999
Q ss_pred Ee-ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 98 VI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 98 V~-~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
|+ ......|++|.+|+++..++|...... +.|....+ ....|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVT-YNGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhc-ccccccCC--------------CcCCCcceeEEEechhheEECCCCCCH
Confidence 97 445568999999999999999875432 11111111 122359999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
++++.+.+.+.|||.++ +...+.++++|+|.|+|.+|++++++|+.+|+ +|+++++++++.++++++|++.+++.++
T Consensus 146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 99999999999999976 44568999999998889999999999999999 8999999999999999999999998765
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCc
Q 016507 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 336 (388)
..+.+ . ..+++|++|||++....+..++++++++ |+++.+|.... ...+++..++.+++.+.++....
T Consensus 223 --~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~--- 290 (337)
T cd05283 223 --PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE--PLPVPPFPLIFGRKSVAGSLIGG--- 290 (337)
T ss_pred --hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC--CCccCHHHHhcCceEEEEecccC---
Confidence 33322 1 2348999999999875588999999997 99999997532 23566666677899999987543
Q ss_pred cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 337 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
.++++.+++++.++++.+ .+ +.|+++++++||+.+.+++. +|+|++
T Consensus 291 ~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 291 RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 367899999999997653 34 78999999999999998776 598874
No 63
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=5.9e-41 Score=317.48 Aligned_cols=334 Identities=26% Similarity=0.384 Sum_probs=278.1
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.+++....+++.|.|++.++||+|||.++++|++|++.+.|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 799999998874448899999999999999999999999999988886543 3367899999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 97 ~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
+|+..+ ..+|+.|.+|..+.+++|..... .|+..+| +|++|+.++.++++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCC
Confidence 998654 56799999999999999986553 3444444 999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHH-cCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
+.+++.+++.+.|||+++ ..++++++++|||+|+|++|++++++|+. .|+ +|+++++++++.++++++|++.+++.+
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999976 77889999999999999999999999998 599 899999999999999999999999875
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
. ..++.+.+++.++ ++|+++.+.++...+..++++++.+ |+++.+|... ...+++...+..+...+.++....
T Consensus 216 ~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~- 288 (338)
T PRK09422 216 R--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP--ESMDLSIPRLVLDGIEVVGSLVGT- 288 (338)
T ss_pred c--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC--CCceecHHHHhhcCcEEEEecCCC-
Confidence 3 1346667776665 6886655555666699999999997 9999998643 234556556666788887764322
Q ss_pred CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEeeC
Q 016507 335 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 387 (388)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~~ 387 (388)
.++++.+++++.++.+.. .+ +.++++++++|++.+.++.. +|+++.+.
T Consensus 289 --~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 289 --RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred --HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 357889999999997643 35 46899999999999988765 49998764
No 64
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=5.4e-41 Score=317.55 Aligned_cols=334 Identities=30% Similarity=0.458 Sum_probs=286.3
Q ss_pred eeeeeecCCCCC-eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC-CCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 17 CRAAIATAPGEP-LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 17 ~ka~~~~~~~~~-~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
||++++..++++ +.+.+.|.|.+++++|+|++.++++|++|+....|.++ ...+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999987 67788899999999999999999999999999888765 2455788999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+..+..+|+.|.+|+.++.+.|..... .|...+| +|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999965432 3443344 99999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
++.+++.++..+.|||.++.....+.++++|||.|+|.+|++++++|+..|+ +|+++++++++.++++++|++++++.+
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999988777889999999998889999999999999999 799999999999999999999998877
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecC
Q 016507 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (388)
+ ..+.+.+ +.+.+ ++|+++||+|....+..++++++++ |+++.+|... ....++...++.++..+.+++..
T Consensus 218 ~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~- 289 (338)
T cd08254 218 D---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGR--DKLTVDLSDLIARELRIIGSFGG- 289 (338)
T ss_pred C---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCC--CCCccCHHHHhhCccEEEEeccC-
Confidence 6 5565656 44555 8999999999877689999999997 9999998643 23445666677788888886532
Q ss_pred CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 334 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
..+.+..++++++++.+.+. .+.+++++++++++.+.+++. +|+|+++
T Consensus 290 --~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 --TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred --CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 24678899999999977654 478999999999999988765 4998864
No 65
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-41 Score=320.33 Aligned_cols=319 Identities=18% Similarity=0.217 Sum_probs=255.2
Q ss_pred CCCCcceeeeeecCCC-C-----CeEEEE---eecC-CCCCCeEEEEEceeccCcccccccccCCCCCCCCccccc--ce
Q 016507 11 AGKPIQCRAAIATAPG-E-----PLVIDE---VIVD-PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH--EA 78 (388)
Q Consensus 11 ~~~~~~~ka~~~~~~~-~-----~~~~~~---~~~p-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~--e~ 78 (388)
+...+++|.+++.+.- . .|++++ ++.| ++++||||||+.|+++|+.|...+.+......+|.++|+ |+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~ 82 (348)
T PLN03154 3 EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEG 82 (348)
T ss_pred CCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEe
Confidence 4455667888884332 1 188877 4666 358999999999999999987654433332345889998 88
Q ss_pred eEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceee
Q 016507 79 IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSE 158 (388)
Q Consensus 79 ~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~ 158 (388)
+|+|..+|+++++|++||+|+.. |+|+|
T Consensus 83 ~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~ae 110 (348)
T PLN03154 83 FGVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEE 110 (348)
T ss_pred eEEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEE
Confidence 99999999999999999999621 38999
Q ss_pred eEEeecCc--eEE--cCCCCCcc-ccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEE
Q 016507 159 YTVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (388)
Q Consensus 159 ~~~~~~~~--~~~--lP~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 232 (388)
|+.++.+. +++ +|++++++ +|++++++++|||+++...+++++|++|||+|+ |++|++++|+|+.+|+ +|+++
T Consensus 111 y~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~ 189 (348)
T PLN03154 111 YSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGS 189 (348)
T ss_pred EEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEE
Confidence 99998753 544 59999986 688999999999998877888999999999997 9999999999999999 89999
Q ss_pred cCCchHHHHHH-HcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCc
Q 016507 233 DVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311 (388)
Q Consensus 233 ~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 311 (388)
++++++.++++ ++|+++++|+++ ..++.+.+++.+++++|++|||+|+.. +..++++++++ |+++.+|.......
T Consensus 190 ~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~ 265 (348)
T PLN03154 190 AGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GRIAVCGMVSLNSL 265 (348)
T ss_pred cCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CEEEEECccccCCC
Confidence 99999999987 799999999864 136777888777668999999999864 89999999997 99999997432210
Q ss_pred -c---ccCHHHHHhcCcEEEEeeecCCC--ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 312 -L---SLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 312 -~---~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
. .++...++.+++++.|++...+. ..+.++++++++++|++.+ .++++|+|+++.+|++.+++++. +|+||
T Consensus 266 ~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvVl 343 (348)
T PLN03154 266 SASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQVI 343 (348)
T ss_pred CCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEEE
Confidence 0 13555677889999998754331 1245788999999997764 47788999999999999998876 59999
Q ss_pred eeCC
Q 016507 385 WMGE 388 (388)
Q Consensus 385 ~~~~ 388 (388)
++.+
T Consensus 344 ~~~~ 347 (348)
T PLN03154 344 RVAK 347 (348)
T ss_pred EecC
Confidence 8753
No 66
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1e-40 Score=316.47 Aligned_cols=337 Identities=26% Similarity=0.461 Sum_probs=281.6
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++++++. +.+++.+.|++.++||+||+.++++|++|+....+.+. ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999999876 99999999999999999999999999999998877652 34578899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|+..+...|+.|.+|..++...|+.... +|....| +|++|+.++.++++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG-------------------AFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------------cccceEEechHHeEECcCCCCH
Confidence 99998888999999999999999987543 3433334 9999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
++++++ ..++|||.++. ...+.++++|||+|+|.+|.+++++|+.+|+++|+++++++++.++++++|+++++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999888 57889999874 778999999999988999999999999999944999998899999999999999998876
Q ss_pred CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCcc-ccCHHHHHhcCcEEEEeeecCC
Q 016507 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
.. .+.+.+..++ ++|++|||+|....+..++++++++ |+++.+|.......+ ..++..++.++..+.++.....
T Consensus 214 --~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (343)
T cd08236 214 --ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYS 289 (343)
T ss_pred --cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccc
Confidence 45 6677777776 7999999998876689999999997 999999965422112 2234445677888888875332
Q ss_pred C--ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhc-Cce-eEEEE
Q 016507 335 K--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKC-LRCVI 384 (388)
Q Consensus 335 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~-~~~-~kvvv 384 (388)
. ..+.++++++++.++.+.+.+.+.+.+++++++++++.+.+ +.. +|+|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 290 APFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 1 14567889999999987654557789999999999999988 444 48774
No 67
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=8.1e-41 Score=316.95 Aligned_cols=324 Identities=23% Similarity=0.325 Sum_probs=263.6
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC-----------CCCCCcccccceeEEEEEe
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV 85 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~v~G~e~~G~Vv~v 85 (388)
|||+++.++ ++++++++.|++++++|+||+.++++|++|+..+.|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689999877 599999999999999999999999999999998877321 2235788999999999999
Q ss_pred cCCCCC-CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 016507 86 GENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (388)
Q Consensus 86 G~~v~~-~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 164 (388)
|++++. |++||+|+..+...|+.|..|..+... .. .|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~~-------------------~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------EA-------------------PGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------CC-------------------CCceeeeEEech
Confidence 999997 999999999999999999999432110 01 249999999999
Q ss_pred CceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH
Q 016507 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (388)
Q Consensus 165 ~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 244 (388)
+.++++|+++++++++ +...+++||++ ...++++++++|||+|+|++|.+++|+|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 56688899987 478889999999999889999999999999999668888888999999999
Q ss_pred cCCcEEEcCCCCCCccHHH---HHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHH
Q 016507 245 FGVTEFVNSKNCGDKSVSQ---IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL 320 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~---~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 320 (388)
+|+++++++++ .+..+ .+.+.+.+ ++|++||++|+...+..++++++++ |+++.+|...... .+......
T Consensus 205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~ 278 (341)
T cd08262 205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESD--NIEPALAI 278 (341)
T ss_pred cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCC--ccCHHHHh
Confidence 99999998765 32211 34444555 8999999999854588999999997 9999998753222 23333334
Q ss_pred hcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 321 HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
.+++.+.+.... ..+++++++++++++.+.+.+++.+.|+++++++|++.+.++.. +|+|++
T Consensus 279 ~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 279 RKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred hcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 567777654321 23478899999999988876677899999999999999988765 488874
No 68
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=5.6e-42 Score=315.74 Aligned_cols=270 Identities=20% Similarity=0.338 Sum_probs=226.7
Q ss_pred ccccceeEEEEEecCCCC------CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCce
Q 016507 73 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 146 (388)
Q Consensus 73 v~G~e~~G~Vv~vG~~v~------~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 146 (388)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.++++.|.+... +|+...+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC----------
Confidence 589999999999999999 89999999999999999999999999999987654 33221000
Q ss_pred ecccccccceeeeEEeecC-ceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcC
Q 016507 147 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 225 (388)
Q Consensus 147 ~~~~~~~g~~a~~~~~~~~-~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g 225 (388)
.....|+|+||+.++.+ +++++|+++++++++.+++.+.|||+++ +.....++++|||+|+|++|++++|+|+.+|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012599999999987 7999999999999999999999999876 4456679999999999999999999999999
Q ss_pred CcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEc
Q 016507 226 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 226 ~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g 304 (388)
+++|++++++++|.++++++|++++++.++ ..+.+++.+.+ ++|++||++|....+..++++++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 956999998999999999999999988654 24556667766 8999999999888799999999997 9999999
Q ss_pred cCCCCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCC--CCCCCcceeeeEecchH
Q 016507 305 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEI 367 (388)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~~ 367 (388)
........++++..++.+++++.|+... ..++++++++++.++ +++++++++++|||+|+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 7543345677888888999999998532 246799999999984 67777899999999874
No 69
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.6e-40 Score=313.52 Aligned_cols=335 Identities=28% Similarity=0.434 Sum_probs=285.3
Q ss_pred eeeeeecCCC-CCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCCC
Q 016507 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 17 ~ka~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
|||+++.+++ ..+++.+.+.|.+.++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7999998877 33999999999999999999999999999999988876543 345678999999999999999999999
Q ss_pred CCEEeecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 95 GDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 95 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
||+|+..+ ...|+.|.+|..++.++|.+... .|+...| +|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCC
Confidence 99998765 57799999999999999987653 3443344 9999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.++..+.|||+++.. .++.++++|||+|+ +.+|++++++|+.+|+ +|+++.+++++.+.++++|++++++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999997654 58999999999987 7799999999999999 8999999999999999999999999
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
.++ .++.+.+.+++++ ++|++||+.++...+..++++++++ |+++.+|... ....+++...++.++..+.+...
T Consensus 217 ~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 291 (341)
T cd08297 217 FKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLV 291 (341)
T ss_pred CCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEecc
Confidence 877 5788888888866 8999999888777789999999997 9999998643 23345666666788999888643
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. .++++.+++++.++.+.+ .+ +.|+++++++|++.+.++.. +|+|+++
T Consensus 292 ~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 292 GT---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred CC---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 32 367889999999997654 34 67999999999999988765 4999875
No 70
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.8e-40 Score=311.45 Aligned_cols=332 Identities=28% Similarity=0.496 Sum_probs=280.7
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++.++++ +++.+.+.|++.++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998885 999999999999999999999999999999988887653 3688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|+..+...|+.|.+|..++.++|..... +|....| +|++|+.++.++++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCH
Confidence 99999998999999999999999987653 3333344 9999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
.+++.+ ..+.++++++ ..+++.++++|||+|+|.+|.+++++|+..|++.|+++++++++.++++++|++++++.++
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998876 6788898876 7789999999999988999999999999999944888989999999999999988888776
Q ss_pred CCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC
Q 016507 257 GDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (388)
..+... +.+.+ ++|++|||++....+..++++++++ |+++.+|.........++...++.+++.+.+....
T Consensus 214 --~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 285 (334)
T cd08234 214 --EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN--- 285 (334)
T ss_pred --CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC---
Confidence 444444 33444 8999999998776689999999997 99999987543334555655555578888877532
Q ss_pred ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEE
Q 016507 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 384 (388)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv 384 (388)
.+.++++++++.++++.+.++++++|+++++++|++.+.+...+|+|+
T Consensus 286 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 333 (334)
T cd08234 286 -PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV 333 (334)
T ss_pred -HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence 356888999999998876666788999999999999998843458876
No 71
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.7e-40 Score=313.34 Aligned_cols=336 Identities=26% Similarity=0.426 Sum_probs=275.2
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCC---CCCCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||++++.++..+++.+.|.|+|+++|++||+.++++|+.|+.++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999887669999999999999999999999999999988754421 1234577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+..+..+|+.|.+|..++.++|.... +.|.... |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVDTD-------------------GCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEeccCC-------------------CcceEEEEechHHcEECcCC
Confidence 9999999888999999999999999996532 2332223 49999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
++.+++ ++...+.++++++. ....++++|||.|+|.+|++++++|+.+|+.+|+++++++++.++++++|++++++.
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998555 55557888887654 456789999999889999999999999998668888888899999999999999987
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHH-HHHhcCcEEEEeee
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLF 331 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~i~g~~~ 331 (388)
++ .++. .+.+++++ ++|++|||+|+......++++++++ |+++.+|.... ...+++. ....+++.+.++..
T Consensus 216 ~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 288 (341)
T cd05281 216 RE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG--PVDIDLNNLVIFKGLTVQGITG 288 (341)
T ss_pred cc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC--CcccccchhhhccceEEEEEec
Confidence 76 5677 78887776 9999999999877789999999997 99999986433 2233322 24556777877652
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
.. ..+.+.++++++.++.+.+.+++.+.++++++++|++.+.+++.+|+|+++
T Consensus 289 ~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 289 RK--MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred CC--cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 22 235678899999999877666677899999999999999887745998863
No 72
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.5e-40 Score=312.81 Aligned_cols=310 Identities=22% Similarity=0.242 Sum_probs=263.6
Q ss_pred eeeeeecCCCCC---eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC-CCCCCcccccceeEEEEEecCCCCCC
Q 016507 17 CRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGV 92 (388)
Q Consensus 17 ~ka~~~~~~~~~---~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~ 92 (388)
|||+++.+++.| +++.++|.|.+.++||+|||.++++|++|+..+.|.++ ...+|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999888754 78899999999999999999999999999999888764 24568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 016507 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (388)
Q Consensus 93 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~ 172 (388)
++||+|+..+ . .|+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~------------------------------~-------------------~g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAP------------------------------V-------------------HGTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEecc------------------------------C-------------------CCcceeEEEEchHHeEECCC
Confidence 9999997421 0 14999999999999999999
Q ss_pred CCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 173 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
++++++++.+++.+.|||+++ +.+++.+|++|||+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999998999999865 5688999999999987 9999999999999999 888888888888888889999999
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 016507 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (388)
+.++ .++.+.+.+++++ ++|++|||+|+.. ...++++++++ |+++.+|... .....+++..++.++..+.++.
T Consensus 190 ~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 263 (324)
T cd08292 190 STEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFW 263 (324)
T ss_pred cCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEE
Confidence 8877 6788889998888 9999999999975 88999999997 9999998742 2344566666677899999887
Q ss_pred ecCCC-------ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 331 FGGLK-------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 331 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
...+. ..+.++++++++.++.+.+. +.+.|+++++.+|++.+.+... +|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 264 GGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred cHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 54321 12367889999999987654 4688999999999999887654 488763
No 73
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=5.1e-40 Score=311.25 Aligned_cols=331 Identities=26% Similarity=0.404 Sum_probs=268.1
Q ss_pred eecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccc-cCCC--CCCCCcccccceeEEEEEecCCCCCCCCCCE
Q 016507 21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (388)
Q Consensus 21 ~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~ 97 (388)
+++++++ +++++.++|.++++||+||+.++++|++|+..++ +... ...+|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4667766 9999999999999999999999999999988763 3321 1245778999999999999999999999999
Q ss_pred EeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 98 VIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 98 V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
|+..+..+|++|.+|..|+.++|....+ +|.. ++ ....|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~---------------~~~~g~~~~~v~v~~~~~~~iP~~~~~ 142 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF---------------PHVQGGFREYLVVDASQCVPLPDGLSL 142 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc---------------CCCCCceeeEEEechHHeEECcCCCCH
Confidence 9999999999999999999999986432 2210 00 001249999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
++|+. ..++++||+++.....+ ++++|||.|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++++++.++
T Consensus 143 ~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~- 219 (339)
T cd08232 143 RRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR- 219 (339)
T ss_pred HHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc-
Confidence 99876 46888999877555555 8999999888999999999999999867999988899999999999999998765
Q ss_pred CCccHHHHHHhhcC--CCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 257 GDKSVSQIIIDMTD--GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 257 ~~~~~~~~i~~~~~--g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
..+ .++.. +++|++|||+++...++.++++++++ |+++.+|... .....++..++.+++.+.+...
T Consensus 220 --~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~--- 287 (339)
T cd08232 220 --DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR--- 287 (339)
T ss_pred --hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec---
Confidence 332 22222 26999999999766689999999997 9999998643 3344455555667888877642
Q ss_pred CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 335 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
..+.++++++++.++.+.+.+.+.++|+++++++|++.+.+++. +|+|+++
T Consensus 288 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 288 -FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred -CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 23578899999999988766767899999999999999877654 5999864
No 74
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=7.9e-40 Score=308.74 Aligned_cols=330 Identities=32% Similarity=0.485 Sum_probs=276.2
Q ss_pred eeeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd 96 (388)
|||+++..+++++.+.++|.|.+.+++|+|++.++++|++|++.+.|..+...+|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999987666699999999999999999999999999999999988766556688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 97 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
+|+..+...|+.|.+|..+..++|.+.. ..|....| +|++|+.++...++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG-------------------GFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC-------------------eeeeEEEechhheEECCCCCCH
Confidence 9999888899999999999999998642 24433344 9999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 255 (388)
++++.+++.+.|||+++.. +.+.++++|||+|+ |++|++++++++..|+ +|+++.+++++.+.+++++++.+++.+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~- 215 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS- 215 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH-
Confidence 9999999999999998765 88999999999987 9999999999999999 889888888888988889988877543
Q ss_pred CCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC
Q 016507 256 CGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 335 (388)
Q Consensus 256 ~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (388)
. +.+.+.+.. ++|++++++|... ...++++++++ |+++.+|..... ...++......++..+.+... .
T Consensus 216 ---~-~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~ 283 (332)
T cd08259 216 ---K-FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSIS---A 283 (332)
T ss_pred ---H-HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecC---C
Confidence 2 555565543 7999999999877 88999999997 999999875322 122333334456777776631 2
Q ss_pred ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 336 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
...+++++++++.++.+. ++++++|+++++.+|++.+.++.. +|+|++
T Consensus 284 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 284 TKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred CHHHHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 245788899999999654 447899999999999999988765 488864
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=6.3e-40 Score=310.20 Aligned_cols=336 Identities=22% Similarity=0.328 Sum_probs=282.1
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++...+.+ +++.+.+.|.+.+++|+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 689998844322 778888888889999999999999999999988886542 35578999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|++.++..|+.|.+|.++.+++|....+ +|....| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999986432 4443344 9999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.+++.+.+|++++.+...+.++++|+|+|+ +.+|++++++++..|+ +|+.+++++++.+.++.++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999999999998888888999999999987 7999999999999999 8999989989999888888888887
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
..+ .++.+.+.+.+.+ ++|++++++|... +...+++++++ |+++.+|.... ....++....+.+++.+.+...
T Consensus 218 ~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
T cd08266 218 YRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTG-YEAPIDLRHVFWRQLSILGSTM 291 (342)
T ss_pred cCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCC-CCCCcCHHHHhhcceEEEEEec
Confidence 765 5677777777666 8999999999865 88999999997 99999986533 2334555455677888887753
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. ...+.++++++.++.+. +++++.|+++++++|++.+.++.. +|+++++
T Consensus 292 ~~---~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 292 GT---KAELDEALRLVFRGKLK--PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred CC---HHHHHHHHHHHHcCCcc--cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 32 34688899999999654 447899999999999999887655 4888763
No 76
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.2e-40 Score=312.41 Aligned_cols=313 Identities=19% Similarity=0.200 Sum_probs=252.9
Q ss_pred cceeeeeecCCCC-CeEEEEeec----CCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccce--eEEEEEec
Q 016507 15 IQCRAAIATAPGE-PLVIDEVIV----DPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEA--IGVVESVG 86 (388)
Q Consensus 15 ~~~ka~~~~~~~~-~~~~~~~~~----p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~--~G~Vv~vG 86 (388)
-.+|+++...+.. .|++.+.++ |+|++|||||||+|++||+.|++...|.... ..+|.++|+++ .|.+..+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~ 85 (338)
T cd08295 6 VILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVD 85 (338)
T ss_pred EEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEe
Confidence 3467777666653 388888887 8899999999999999999999988885432 34578899865 45666688
Q ss_pred CCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-C
Q 016507 87 ENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-A 165 (388)
Q Consensus 87 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~ 165 (388)
++++.|++||+|+.. |+|+||++++. .
T Consensus 86 ~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~ 113 (338)
T cd08295 86 SGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQ 113 (338)
T ss_pred cCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchh
Confidence 999999999999621 38999999999 7
Q ss_pred ceEEcC-CCCCcc-ccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH
Q 016507 166 HVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (388)
Q Consensus 166 ~~~~lP-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 242 (388)
.++++| +++++. +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+++
T Consensus 114 ~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~ 192 (338)
T cd08295 114 DLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLL 192 (338)
T ss_pred ceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999995 678887 799999999999998878889999999999997 9999999999999999 899999999999999
Q ss_pred HH-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCc----cccCHH
Q 016507 243 KR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ----LSLSSF 317 (388)
Q Consensus 243 ~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~ 317 (388)
++ +|+++++++.+ ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++.+|....... ...+..
T Consensus 193 ~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~ 268 (338)
T cd08295 193 KNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLL 268 (338)
T ss_pred HHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHH
Confidence 98 99999998654 136777787776559999999999855 89999999997 99999986432111 113445
Q ss_pred HHHhcCcEEEEeeecCCCc--cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 318 EVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.++.+++++.++....+.. .+.++++++++.+|++++. +...|+++++.+|++.+++++. +|+|+++
T Consensus 269 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 269 NIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 5667788888865543321 2347788999999977654 5567999999999999988765 5999864
No 77
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.6e-40 Score=312.28 Aligned_cols=324 Identities=23% Similarity=0.290 Sum_probs=262.8
Q ss_pred eeeeeecCCCCC--eEEEE-eecCCCCCCeEEEEEceeccCcccccccccCCC--------------------CCCCCcc
Q 016507 17 CRAAIATAPGEP--LVIDE-VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------------------PAVFPRI 73 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~-~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~v 73 (388)
|||+++.+++.+ +.+.+ .+.|++.+++|+|||.++++|++|++++.|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888876643 55543 577788999999999999999999998877543 2346889
Q ss_pred cccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccc
Q 016507 74 LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSV 153 (388)
Q Consensus 74 ~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~ 153 (388)
+|||++|+|+++|+++++|++||+|+..+..+|+.|..|.. |. .+|...+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~------~~~~~~~------------------- 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID------YIGSERD------------------- 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc------ccCCCCC-------------------
Confidence 99999999999999999999999999988888888766421 21 0222223
Q ss_pred cceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEE
Q 016507 154 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (388)
Q Consensus 154 g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 232 (388)
|+|++|+.++...++++|+++++.+++.+++.+.|||+++ ...++.++++|||+|+ |++|++++++|+.+|+ +|+++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 3999999999999999999999999999999999999976 7788999999999998 9999999999999999 78888
Q ss_pred cCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCc
Q 016507 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311 (388)
Q Consensus 233 ~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 311 (388)
++++ +.+.++++|++.+++... ....+ .+.+.+ ++|++||++|+.. +..++++++.+ |+++.+|... ...
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~ 279 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAIA-GPV 279 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEecccC-Ccc
Confidence 7655 888888999987766544 33333 445555 8999999999865 89999999997 9999998642 222
Q ss_pred cccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 312 LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 312 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
..+++..++.++..+.++.... .+.++++++++.++.+. +++.+.|+++++.+|++.+.++.. +|+|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 280 VELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIR--PVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred ccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCcc--cccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 4667777778899998886432 35788999999999654 447799999999999999987665 4888763
No 78
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=6e-40 Score=308.91 Aligned_cols=318 Identities=25% Similarity=0.344 Sum_probs=263.9
Q ss_pred eeeeeecCCC-CCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++..++ +.+++.+.+.|+++++||+||+.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899997766 34888888888899999999999999999999887653 222457889999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
|+|+..+...|+.|..|..++.++|+...+ .|+...| +|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCC
Confidence 999998888999999999999999986543 3333334 999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
+++++.+++.+.|||+++. .++++++++|+|+|+ |++|++++++|+.+|+ +|+++.+ .++++++|++++++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence 9999999999999999875 488999999999997 9999999999999999 7888752 3777889999998765
Q ss_pred CCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 255 NCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
+ ..+.+.+++ +++|+++|++|.. .+..++++++++ |+++.+|.. ......+++..+..++..+.++..+.
T Consensus 212 ~-----~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 281 (325)
T cd08264 212 E-----VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGGT- 281 (325)
T ss_pred H-----HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCCC-
Confidence 4 245566666 6899999999985 599999999997 999999864 22335667777777788888875332
Q ss_pred CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce
Q 016507 335 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 379 (388)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~ 379 (388)
.++++++++++... . ..++++|+++++++|++.+.+.+.
T Consensus 282 --~~~~~~~~~l~~~~--~--~~~~~~~~~~~~~~a~~~~~~~~~ 320 (325)
T cd08264 282 --RKELLELVKIAKDL--K--VKVWKTFKLEEAKEALKELFSKER 320 (325)
T ss_pred --HHHHHHHHHHHHcC--C--ceeEEEEcHHHHHHHHHHHHcCCC
Confidence 35788899988533 3 236689999999999998887654
No 79
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.2e-39 Score=305.91 Aligned_cols=331 Identities=26% Similarity=0.452 Sum_probs=273.1
Q ss_pred cCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCC---CCCCCCcccccceeEEEEEecCCCCCCCCCCEEe
Q 016507 23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99 (388)
Q Consensus 23 ~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~---~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~ 99 (388)
++|+.++++++.|.|.|+++||+||+.++++|++|+.++.+.. ....+|.++|+|++|+|+++|++++.|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 5677789999999999999999999999999999998765532 1224577899999999999999999999999999
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCcccc
Q 016507 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA 179 (388)
Q Consensus 100 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~a 179 (388)
..+...|+.|..|..+..+.|+..++ .|+... |+|++|+.++.+.++++|++++.++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---EeecCC-------------------CcceeEEEeehHHcEECcCCCChHhh
Confidence 98889999999999999999987643 233223 49999999999999999999998655
Q ss_pred ccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCc
Q 016507 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK 259 (388)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 259 (388)
+++..+.+|++++ .....++++|+|.|+|++|.+++++|+.+|++.|+++++++++.++++++|++++++..+ .
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~ 216 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E 216 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence 5666888888865 345788999999888999999999999999944888888888999999999999998876 6
Q ss_pred cHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHH-HHHhcCcEEEEeeecCCCcc
Q 016507 260 SVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGLKAK 337 (388)
Q Consensus 260 ~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~ 337 (388)
++.+.+.+++++ ++|++|||+|+...+...+++++++ |+++.+|.... ...++.. .+..+++.+.+... ....
T Consensus 217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~ 291 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG--KVTIDFTNKVIFKGLTIYGITG--RHMF 291 (340)
T ss_pred CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC--CcccchhhhhhhcceEEEEEec--CCch
Confidence 788888888776 8999999999877689999999997 99999987532 2233333 45566777776642 1223
Q ss_pred CcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCceeEEEEee
Q 016507 338 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 386 (388)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvv~~ 386 (388)
+.+.++++++.++++.+.+++.+.++++++.++++.+.++..+|+|+.+
T Consensus 292 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 292 ETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 5678899999999887656678999999999999998877667999864
No 80
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.1e-39 Score=303.92 Aligned_cols=328 Identities=27% Similarity=0.426 Sum_probs=273.6
Q ss_pred eeeeecCCCCCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCCE
Q 016507 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (388)
Q Consensus 18 ka~~~~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~ 97 (388)
||+++.+++..+++++.|.|.+.+++|+|++.++++|++|+..+.|......+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899888656999999999999999999999999999999998887654456889999999999999999999999999
Q ss_pred EeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc
Q 016507 98 VIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (388)
Q Consensus 98 V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 176 (388)
|++.+. ..|++|.+|.+++++.|.+..+ +++...| +|++|+.++.++++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCH
Confidence 987554 6799999999999999998654 3332233 9999999999999999999999
Q ss_pred cccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC
Q 016507 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 177 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
.+++.+++.+.|||.++.. .++.++++|||+|+|.+|++++++|+..|+ +|+++++++++.++++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999999999999997754 789999999999888899999999999999 8999999999999999999998887655
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCc
Q 016507 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 336 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 336 (388)
..+... ..+++|++||+++.......++++++++ |+++.++.... ....++...++.++.++.+++...
T Consensus 216 --~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--- 284 (330)
T cd08245 216 --ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES-PPFSPDIFPLIMKRQSIAGSTHGG--- 284 (330)
T ss_pred --cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC-CccccchHHHHhCCCEEEEeccCC---
Confidence 333222 2247999999988776689999999997 99999986422 233333455677788888876433
Q ss_pred cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEE
Q 016507 337 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 384 (388)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv 384 (388)
...++.+++++.++.+.+ ..+.|+++++++|++.+.++... |+|+
T Consensus 285 ~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 285 RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 357888999999997654 34789999999999998877654 7664
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.7e-39 Score=304.93 Aligned_cols=305 Identities=19% Similarity=0.209 Sum_probs=246.6
Q ss_pred ceeeeeecCC--CCC----eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCC
Q 016507 16 QCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (388)
Q Consensus 16 ~~ka~~~~~~--~~~----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v 89 (388)
+|||+++.++ +.+ ++++++|.|+|++|||||||.+++||+.|.....+ ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 5899999883 332 88899999999999999999999999987653221 124688999999999985 45
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC---c
Q 016507 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA---H 166 (388)
Q Consensus 90 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~---~ 166 (388)
+.|++||+|+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999631 278999999999 9
Q ss_pred eEEcCCCCC--c---cccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHH
Q 016507 167 VVKVDPTVP--P---NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (388)
Q Consensus 167 ~~~lP~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 240 (388)
++++|++++ . ..+++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999998 2 2234678899999998888899999999999986 9999999999999999 8999999999999
Q ss_pred HHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCC---c--cccC
Q 016507 241 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS---Q--LSLS 315 (388)
Q Consensus 241 ~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~--~~~~ 315 (388)
+++++|+++++++++ .++.+.+++.+++++|++||++|+.. +..++++++++ |+++.+|...... . ....
T Consensus 183 ~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~ 257 (329)
T cd08294 183 WLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYV 257 (329)
T ss_pred HHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCccc
Confidence 999999999999887 67888888877668999999999865 89999999997 9999998532111 1 1223
Q ss_pred HHHHHhcCcEEEEeeecCCC--ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 316 SFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 316 ~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
...+..+++++.+++...+. ..+.++++++++.++++.+. ...+|+++++++|++.+.+++. +|+|+++
T Consensus 258 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 258 QETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 34556678888887644331 12346788899999977664 3456899999999999988765 5999864
No 82
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=6.6e-39 Score=304.36 Aligned_cols=300 Identities=19% Similarity=0.203 Sum_probs=233.5
Q ss_pred eEEEEeecCCCC-CCeEEEEEceeccCcccccccc---cCCCCCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCC
Q 016507 29 LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA 104 (388)
Q Consensus 29 ~~~~~~~~p~~~-~~eVlVkv~~~~i~~~D~~~~~---g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~ 104 (388)
++++++|.|+|. ++||||||.|+|||+.|..... +.....++|.++|||++|+|+++|+++++|++||+|+..
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 888999999874 9999999999999999864332 211123567899999999999999999999999999631
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc----cc
Q 016507 105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----AC 180 (388)
Q Consensus 105 ~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~----aa 180 (388)
.++|+||+.++.++++++|+++++.+ ++
T Consensus 100 ------------------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 100 ------------------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred ------------------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 02799999999999999999865433 45
Q ss_pred cccchhhhhHHHHHHhcCCCCC--CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcCCCC
Q 016507 181 LLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNC 256 (388)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~~~~--~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~ 256 (388)
+++.++.|||+++.+.++++++ ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+++++ +|+++++++++
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 6677899999988777888877 99999997 9999999999999998679999999999998876 99999999887
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCC-Ccc----ccC--HHHH-HhcCcEEEE
Q 016507 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG-SQL----SLS--SFEV-LHSGKILMG 328 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~----~~~--~~~~-~~~~~~i~g 328 (388)
.++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... ... .+. ...+ ..+++...+
T Consensus 211 --~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (345)
T cd08293 211 --DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRER 286 (345)
T ss_pred --CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEE
Confidence 67888888887668999999999976 79999999997 999999853211 111 111 1111 223444433
Q ss_pred eeecCCC--ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 329 SLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 329 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.....+. ..+.++++++++.++.+.+. +...++++++++|++.+.+++. +|+|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 287 FLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 3222211 12346778889999977654 4456799999999999988765 5999874
No 83
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7.8e-39 Score=301.85 Aligned_cols=323 Identities=25% Similarity=0.356 Sum_probs=269.1
Q ss_pred eeeeeecCCCC----CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCC
Q 016507 17 CRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (388)
Q Consensus 17 ~ka~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~ 92 (388)
|||+++.+++. ++++.+.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999988883 58888888888999999999999999999999988876655678899999999999999999999
Q ss_pred CCCCEEeecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 016507 93 VEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (388)
Q Consensus 93 ~vGd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP 171 (388)
++||+|+..+ ..+|+.|.+|..+.+++|....+ .|+..+| +|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECC
Confidence 9999997654 46799999999999999986654 3443344 99999999999999999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
+++++.+++.+++++.|||+++ ..++++++++|||+|+|++|++++++++..|+ +|+++++++++.++++++|+++++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88999999999999999999999999999999 899999999999999999998888
Q ss_pred cCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 252 NSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
+.+. . ..+++|+++++.+....+..++++++++ |+++.+|... .....+++.. +.++..+.+...
T Consensus 217 ~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~-~~~~~~i~~~~~ 281 (329)
T cd08298 217 DSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYEL-LWGEKTIRSVAN 281 (329)
T ss_pred ccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhh-hhCceEEEEecC
Confidence 7654 1 1237999999977766799999999997 9999988532 2222333333 345666766642
Q ss_pred cCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEE
Q 016507 332 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 384 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv 384 (388)
. ..+.++.++++++++.+.+ +.+.|+++++++|++.+++.... |+|+
T Consensus 282 ~---~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 282 L---TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred C---CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2 2356888999999997654 35889999999999999876654 7764
No 84
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=4.3e-39 Score=303.12 Aligned_cols=292 Identities=20% Similarity=0.223 Sum_probs=237.4
Q ss_pred eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCC
Q 016507 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTE 108 (388)
Q Consensus 29 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~ 108 (388)
+++.++|.|+|++|||||||.|+++|+.+.. |.+.....|.++|.|++|+|+++|+ .|++||+|+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8889999999999999999999999997643 4333334478999999999999874 59999999631
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc----CCCCCcccc-cccc
Q 016507 109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLS 183 (388)
Q Consensus 109 c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l----P~~~~~~~a-a~~~ 183 (388)
++|++|+.++.+.+.++ |+++++++| ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 27899999999888887 899999987 6788
Q ss_pred chhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHH
Q 016507 184 CGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVS 262 (388)
Q Consensus 184 ~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 262 (388)
+++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++++++ ...+.
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~ 197 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLE 197 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHH
Confidence 899999998888899999999999986 9999999999999999 8999999999999999999999999875 12455
Q ss_pred HHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCC---Cccc--cCHHHHHhcCcEEEEeeecCCC--
Q 016507 263 QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---SQLS--LSSFEVLHSGKILMGSLFGGLK-- 335 (388)
Q Consensus 263 ~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~--~~~~~~~~~~~~i~g~~~~~~~-- 335 (388)
+.++..+++++|++||++|+.. +..++++++++ |+++.+|..... ...+ .....+..+++++.++....+.
T Consensus 198 ~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 275 (325)
T TIGR02825 198 ETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGE 275 (325)
T ss_pred HHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhh
Confidence 5566655458999999999876 79999999997 999999864311 1111 1233455678888887643322
Q ss_pred -ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 336 -AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 336 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
..+.++++++++.+|++.+. +...|+++++.+|++.+++++. +|+|++
T Consensus 276 ~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 276 VRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 12467889999999987665 5577899999999999988765 488874
No 85
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.8e-38 Score=294.90 Aligned_cols=301 Identities=27% Similarity=0.443 Sum_probs=255.6
Q ss_pred eeeeeecCCC-CCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++.+++ ..+++++++.|++.+++|+||+.++++|++|+....|.+.....|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5889988755 349999999999999999999999999999998888876444457899999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 96 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
|+|+..+. .+|+.|.+|..+..+.|..... +|.... |+|++|+.++.++++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQAD-------------------GGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCC-------------------CceEEEEEcchHHeEECcCCC
Confidence 99988774 6799999999999999976432 232223 499999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEc--CCchHHHHHHHcCCcEEEc
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD--VISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~lga~~v~~ 252 (388)
++++++ +...+++||+++.....+.++++|||.|+|.+|.+++++|+.+|+ +|+++. +++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999988888899999999998789999999999999999 787763 34557788899999888 7
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
++. .++.+.+.+.+.+ ++|++||++|+...+...+++++++ |+++.+|... .....+++..++.+++++.|+++
T Consensus 216 ~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~ 290 (306)
T cd08258 216 GGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRS 290 (306)
T ss_pred CCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEec
Confidence 766 6788888887776 8999999998766689999999997 9999999854 33467788888889999999986
Q ss_pred cCCCccCcHHHHHHHHhCC
Q 016507 332 GGLKAKSDIPILLKRYMDK 350 (388)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~ 350 (388)
+. +++++++++++++|
T Consensus 291 ~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 291 ST---PASWETALRLLASG 306 (306)
T ss_pred Cc---hHhHHHHHHHHhcC
Confidence 54 46799999998765
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.4e-38 Score=299.99 Aligned_cols=313 Identities=22% Similarity=0.287 Sum_probs=259.8
Q ss_pred eeeeeecCCCCC---eEEEEeecCCCCC-CeEEEEEceeccCcccccccccCCCCC-C----CCcccccceeEEEEEecC
Q 016507 17 CRAAIATAPGEP---LVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKMKDFPA-V----FPRILGHEAIGVVESVGE 87 (388)
Q Consensus 17 ~ka~~~~~~~~~---~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~v~G~e~~G~Vv~vG~ 87 (388)
|||+++.+++.+ +.+++.|.|+|.+ ++|+||+.++++|++|+..+.|..+.. . +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 799999998875 8999999999888 999999999999999999988875431 2 577999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCce
Q 016507 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (388)
Q Consensus 88 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~ 167 (388)
++..|++||+|+.... ..|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999974310 0249999999999999
Q ss_pred EEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc----hHHHHH
Q 016507 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIG 242 (388)
Q Consensus 168 ~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~~~~ 242 (388)
+++|+++++++++.+++.+.|||+++.....+.++++|||+|+ |++|++++++|++.|+ +|+++.+++ ++.+++
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999998877778999999999987 9999999999999999 787777665 678888
Q ss_pred HHcCCcEEEcCCCCCCc---cHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHH
Q 016507 243 KRFGVTEFVNSKNCGDK---SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV 319 (388)
Q Consensus 243 ~~lga~~v~~~~~~~~~---~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~ 319 (388)
+++|++++++.+. . .+.+.+.+++++++|++|||+|+.. +...+++++++ |+++.+|.... ....++...+
T Consensus 192 ~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~ 265 (341)
T cd08290 192 KALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLL 265 (341)
T ss_pred HhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHH
Confidence 8999999998765 4 6777777776558999999999876 77899999997 99999986432 2345666566
Q ss_pred HhcCcEEEEeeecCCCc-------cCcHHHHHHHHhCCCCCCCcceeeeE---ecchHHHHHHHHhcCce-eEEEEee
Q 016507 320 LHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 320 ~~~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
+.++..+.+.....+.. ...++.+++++.++.+.+. ..+.+ +++++++|++.+.++.. +|+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 78899999887543211 1247788899999977654 44566 99999999999887665 4999874
No 87
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.1e-38 Score=298.64 Aligned_cols=315 Identities=17% Similarity=0.224 Sum_probs=257.0
Q ss_pred ceeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCC
Q 016507 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 16 ~~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
+|||+++.+++.+ +++.+++.|.++++||+||+.++++|++|+.+..|.++...+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 4899999888765 88889999999999999999999999999999888776555788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+... . +.|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-----------------------------~-------------------~~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQ-----------------------------S-------------------ALGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECC-----------------------------C-------------------CCcceeeEEEcCHHHceeCCCC
Confidence 999996310 0 0149999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++++++.+++.+.|||.++.....+.+|++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.++++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999999899999998777788999999999975 9999999999999999 8999999999999999999999998
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEE--EEe
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL--MGS 329 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i--~g~ 329 (388)
.+. .++.+.+++.+++ ++|++|||+++.. ....+++++++ |+++.+|.... ....++...+..++... ...
T Consensus 192 ~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 265 (327)
T PRK10754 192 YRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTRPS 265 (327)
T ss_pred CCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEecce
Confidence 876 6788888888887 8999999999865 88899999997 99999997532 12233433333222211 111
Q ss_pred eecCCCcc----CcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 330 LFGGLKAK----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 330 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
........ +.++.+++++.+|.+.+..++.+.|+++++.+|++.+.++.. +|+|+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 266 LQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred eecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 00111111 234568889999988765556799999999999999887664 599986
No 88
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.5e-37 Score=292.37 Aligned_cols=313 Identities=20% Similarity=0.231 Sum_probs=260.4
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC---CCCCcccccceeEEEEEecCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG 91 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~---~~~p~v~G~e~~G~Vv~vG~~v~~ 91 (388)
|||+++++++.+ +.+.+.+.|.+.+++|+||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876643 667777777889999999999999999999888776432 345788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 016507 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (388)
Q Consensus 92 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP 171 (388)
+++||+|+.... .. .|+|++|+.++.++++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~~-------------------~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------RA-------------------GGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------CC-------------------CceeeEEEEEchHHeEeCC
Confidence 999999975310 01 2499999999999999999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v 250 (388)
+++++.+++.+++.+.|||. +.+.++++++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++++
T Consensus 114 ~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 99999999999999999964 677889999999999986 9999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 016507 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (388)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (388)
++.++ .++.+.+.+.+++ ++|+++|++|+.. ...++++++.+ |+++.+|..... ...++...++.+++.+.+.
T Consensus 192 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08244 192 VDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGE-WTALDEDDARRRGVTVVGL 265 (324)
T ss_pred EecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCC-CCccCHHHHhhCCcEEEEe
Confidence 98876 6777888887777 8999999999886 79999999997 999999875332 2355655667889998887
Q ss_pred eecCCCc---cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEEee
Q 016507 330 LFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 386 (388)
Q Consensus 330 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~~ 386 (388)
....... .+.++++++++.++.+. +++++.|+++++++|++.+.++... |+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 266 LGVQAERGGLRALEARALAEAAAGRLV--PVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 6543221 24577788899898664 3477899999999999998887654 988864
No 89
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1e-37 Score=295.05 Aligned_cols=309 Identities=17% Similarity=0.165 Sum_probs=248.1
Q ss_pred eeeeecCC---CCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCC
Q 016507 18 RAAIATAP---GEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (388)
Q Consensus 18 ka~~~~~~---~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~ 92 (388)
||+++..+ +.+ +++.++|.|+|+++||+|||.++++|++|+..+.|..+...+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57788776 433 8888999999999999999999999999999888876545568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 016507 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (388)
Q Consensus 93 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~ 172 (388)
++||+|+... +... .|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~---------------------------~~~~-------------------~g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAG---------------------------DIDR-------------------PGSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcC---------------------------CCCC-------------------CCcccceEEEcHHHcccCCC
Confidence 9999997420 0011 24999999999999999999
Q ss_pred CCCccccccccchhhhhHHHHHHhcCCCC-----CCEEEEEcc-chhHHHHHHHHHHc-CCcEEEEEcCCchHHHHHHHc
Q 016507 173 TVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRF 245 (388)
Q Consensus 173 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~l 245 (388)
++++++++.+++++.|||+++....++.+ +++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.++++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999998878888877 999999986 99999999999998 99 899999999999999999
Q ss_pred CCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcE
Q 016507 246 GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 325 (388)
Q Consensus 246 ga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 325 (388)
|+++++++.. ++.+.+.+...+++|+++|++++.......+++++++ |+++.++.. ..++...+..++..
T Consensus 194 g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~ 263 (336)
T TIGR02817 194 GAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSIS 263 (336)
T ss_pred CCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceE
Confidence 9999998543 4667777754348999999987666689999999997 999988532 23444444555566
Q ss_pred EEEeeecC--CCc-------cCcHHHHHHHHhCCCCCCCcceeeeE---ecchHHHHHHHHhcCce-eEEEEe
Q 016507 326 LMGSLFGG--LKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 326 i~g~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
+.+..+.. ... ...++++++++.++.+.+ .+.+.+ +++++++|++.+.+++. +|+|++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 264 LHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRT--TLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeec--cchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 66543321 110 134788999999996653 344555 46899999999988765 488874
No 90
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-37 Score=292.37 Aligned_cols=314 Identities=22% Similarity=0.275 Sum_probs=259.9
Q ss_pred ceeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCC
Q 016507 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (388)
Q Consensus 16 ~~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~ 92 (388)
+|||+++.+++.. +++.+.+.|++.++||+|||.++++|+.|+....|..+. ...|.++|||++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 5899999988753 777788888899999999999999999999888876542 3456789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 016507 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (388)
Q Consensus 93 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~ 172 (388)
++||+|+... . .|+|++|+.++.++++++|+
T Consensus 81 ~~Gd~V~~~~------------------------------~-------------------~g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL------------------------------P-------------------GGGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec------------------------------C-------------------CCceeeEEEecHHHcEeCCC
Confidence 9999996320 1 14999999999999999999
Q ss_pred CCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 173 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
++++.+++.+.+.+.|||.++.....+.++++|||+|+ |.+|++++++|+.+|+ +++.+.+++++.++++++|+++++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998877788999999999996 9999999999999999 777788899999999999999999
Q ss_pred cCCCCCCcc-HHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccc-cCHHHHHhcCcEEEE
Q 016507 252 NSKNCGDKS-VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMG 328 (388)
Q Consensus 252 ~~~~~~~~~-~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~i~g 328 (388)
+... .+ +.+.+.+.+++ ++|++||++++.. +..+++++.++ |+++.+|.... .... ++...++.++..+.+
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 264 (334)
T PTZ00354 191 RYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIF 264 (334)
T ss_pred ecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEe
Confidence 8765 44 77788888776 8999999998765 88999999997 99999986432 2333 666667777778888
Q ss_pred eeecCCCcc-------CcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEeeC
Q 016507 329 SLFGGLKAK-------SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 387 (388)
Q Consensus 329 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~~ 387 (388)
+........ +.++++++++.++.+. +++.+.+++++++++++.+.+++. +|+|+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 265 STLRSRSDEYKADLVASFEREVLPYMEEGEIK--PIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred eeccccchhhhHHHHHHHHHHHHHHHHCCCcc--CccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 765432110 2346778888888655 347789999999999999887664 59998764
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-36 Score=287.23 Aligned_cols=330 Identities=24% Similarity=0.317 Sum_probs=269.7
Q ss_pred eeeeeecCCC--CCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++...+ ..+++.+.+.|.++++|++|++.++++|++|+....|.++. ..+|.++|||++|+|+++|+.+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998664 33888888888899999999999999999999988876543 34678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+......|+.|.+| .|.... ..|...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~---~~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPT------AEDEAS---ALGGPID-------------------GVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEeccccccccccc------cccccc---ccccccC-------------------ceeeeEEEecHHHeEECCCC
Confidence 9999988766555443332 332111 1232223 39999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++.+++.+.+.+.+||+++.+...+++|++|+|+|+|++|+++++++++.|+ +|+++++++++.++++++|++++++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999988777889999999999889999999999999999 89999999999999999999999886
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
+. ..++.+.+.+.+++ ++|++||+++... +..++++++++ |+++.+|..... ........++.+++.+.+....
T Consensus 212 ~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 286 (336)
T cd08276 212 RT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVG 286 (336)
T ss_pred Cc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecC
Confidence 54 13577788888876 8999999998665 88999999997 999999975332 2245556677889999988754
Q ss_pred CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 333 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
. ...++++++++.++.+.+ ...+.|++++++++++.+.++.. +|++++
T Consensus 287 ~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 287 S---RAQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred c---HHHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 3 357888999998886543 35689999999999999887665 488875
No 92
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.4e-36 Score=285.81 Aligned_cols=313 Identities=19% Similarity=0.182 Sum_probs=246.1
Q ss_pred eeeeeecCCCC--CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++.+++. ++++.+.|.|.+++++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999885 5999999999999999999999999999999998887542 345789999999999999 467899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+.... ..|+..+| +|++|+.++.++++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~~~g-------------------~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMNTDG-------------------GFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCCCCc-------------------eeEEEEEEchhhEEECCCC
Confidence 9999975310 02332333 9999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhc--CCC-CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTA--NVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
+++++++.+++.+.|||.++.... ++. .+++|+|+|+ |++|++++++|+.+|+ +|+++++++++.++++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999998775543 335 3579999997 9999999999999999 7999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 016507 250 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (388)
Q Consensus 250 v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 328 (388)
+++.++ . ...+.+...+ ++|++||++++.. +..++++++++ |+++.+|..... ...+++..++.+++++.+
T Consensus 195 ~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~ 266 (325)
T cd05280 195 VLDRED---L--LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLG 266 (325)
T ss_pred EEcchh---H--HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEE
Confidence 988654 2 1223333333 8999999999865 99999999997 999999975322 224555555567889888
Q ss_pred eeecCCCc---cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 329 SLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 329 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
........ .+.++.+.+++..+. ...+.++|+++++++|++.+.+++. +|+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 267 IDSVNCPMELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred EEeecCchhHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 76543221 122334444445552 2236799999999999999988765 4988864
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.6e-36 Score=286.12 Aligned_cols=311 Identities=24% Similarity=0.272 Sum_probs=254.6
Q ss_pred ceeeeeecCCCC----CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCC
Q 016507 16 QCRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (388)
Q Consensus 16 ~~ka~~~~~~~~----~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~ 90 (388)
.|||+++.+++. ++++++++.|.+.++||+|||.++++|++|+....|.+.. ..+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 389999988765 4889999999999999999999999999999988876542 45788999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 016507 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (388)
Q Consensus 91 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l 170 (388)
.+++||+|+.. ..|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~--------------------------------------------------~~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATM--------------------------------------------------SFGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEe--------------------------------------------------cCcceeEEEEechHHeEEC
Confidence 99999999742 1249999999999999999
Q ss_pred CCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 171 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
|++ ..+++.+++.+.|||+++.+..++.++++|+|+|+ |.+|++++++|+..|+ +|+++.+++++.+.++++|+++
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677888899999998877788999999999986 9999999999999999 8999988899999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCC---------CccccCHHHHH
Q 016507 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---------SQLSLSSFEVL 320 (388)
Q Consensus 250 v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---------~~~~~~~~~~~ 320 (388)
+++.++ ..+.+.+.+..++++|++||++|+.. +..++++++++ |+++.+|..... ....++ ...+
T Consensus 188 v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 261 (329)
T cd08250 188 PINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLP-PKLL 261 (329)
T ss_pred EEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecccCCcccCccccccccccc-HHHh
Confidence 988766 56666776655448999999999754 89999999997 999999864321 111223 2345
Q ss_pred hcCcEEEEeeecCCC--ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEEe
Q 016507 321 HSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 385 (388)
Q Consensus 321 ~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~ 385 (388)
.++..+.++....+. ..+.+.++++++.++.+.+.....+.++++++++|++.+.+++.. |+|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 678888887643321 134577888999999776644445679999999999999887654 88763
No 94
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.7e-36 Score=287.04 Aligned_cols=312 Identities=24% Similarity=0.316 Sum_probs=248.1
Q ss_pred eeeeeecCCC-CCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 17 ~ka~~~~~~~-~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
|||+++++++ ..+++++++.|+|+++||+||+.++++|++|+....+.+ ...+|.++|||++|+|+++|++++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899999884 338889999999999999999999999999998876654 22357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
|+|+......|+ +... .|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~~~~-------------------~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------NDPR-------------------NGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------CCCC-------------------CCcccceEEechhheEECCCCCC
Confidence 999865332211 0111 24999999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCC----------CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~----------~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 244 (388)
+++++.+++.+.|||+++....++ .++++|||+|+ |++|++++++|+..|+ +|+++. ++++.+++++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987665544 78999999997 9999999999999999 888887 5688899999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhc--CCceEEEEccCCCCCccccCHHHHHhc
Q 016507 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK--GWGKTIVLGVDQPGSQLSLSSFEVLHS 322 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~ 322 (388)
+|++++++.++ ..+.+.+++++++++|++||++|++..+..+++++++ + |+++.+|...... .+ ..
T Consensus 197 ~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~------~~ 264 (339)
T cd08249 197 LGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP------RK 264 (339)
T ss_pred cCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC------CC
Confidence 99999999877 6788888887766899999999985558999999999 8 9999998643221 11 11
Q ss_pred CcEEEEeeecCC---------CccCcHHHHHHHHhCCCCCCCcceeeeEe--cchHHHHHHHHhcCc-e-eEEEEee
Q 016507 323 GKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMK--FEEINSAFDLLIKGK-C-LRCVIWM 386 (388)
Q Consensus 323 ~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--l~~~~~A~~~~~~~~-~-~kvvv~~ 386 (388)
+........... .....++.+++++.++++.+. ....++ ++++++|++.+.++. . +|+|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 265 GVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred CceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 222222221111 112346778889999977765 345666 999999999998877 5 4999874
No 95
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=4.3e-36 Score=282.74 Aligned_cols=315 Identities=17% Similarity=0.208 Sum_probs=242.6
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCC-CCCCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++.+++.+ +.++++|.|.+.++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++| +++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 799999988764 8888999999999999999999999999987654321 223458899999999999964 57899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+..+. .+|...+ |+|++|+.++.++++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSY------------------------DLGVSHH-------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEccc------------------------ccCCCCC-------------------CcceeEEEEcHHHeEECCCC
Confidence 9999975421 0222223 49999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHh--cCC-CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRT--ANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~--~~~-~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
+++++++.+++.+.||+.++... ..+ ..+++|||+|+ |++|++++++|+.+|+ +|+++++++++.++++++|+++
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999998876433 233 34789999997 9999999999999999 8999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 016507 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (388)
Q Consensus 250 v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (388)
+++.++ . ..+.+.++.++++|++|||+|+.. +..++++++++ |+++.+|... ....+++...++.+++.+.+.
T Consensus 195 v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T cd08289 195 VIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGI 267 (326)
T ss_pred EEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEE
Confidence 998765 3 345566664448999999999854 89999999997 9999999753 233444556666789999987
Q ss_pred eecCCCccCcHHHHHHHHhCCCCC---CCcceeeeEecchHHHHHHHHhcCcee-EEEEee
Q 016507 330 LFGGLKAKSDIPILLKRYMDKELE---LDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 386 (388)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~~ 386 (388)
...... ......+++.+.+ .+. ....+.++|+++++.+|++.+.++... |+|+++
T Consensus 268 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 268 DSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 532210 1122333333322 121 122457999999999999999887654 888863
No 96
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.1e-37 Score=285.30 Aligned_cols=302 Identities=24% Similarity=0.378 Sum_probs=230.6
Q ss_pred eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCC----CCCcccccceeEEEEE---ec-CCCCCCCCCCEEee
Q 016507 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPA----VFPRILGHEAIGVVES---VG-ENVDGVVEGDVVIP 100 (388)
Q Consensus 29 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~----~~p~v~G~e~~G~Vv~---vG-~~v~~~~vGd~V~~ 100 (388)
...++.++|.|.+++++|++.+++.|+.|+.+..|.+.+. .+|.+++.++.|.+.. +| ..+..+.+||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 4556899999999999999999999999999999988653 4676666666555333 33 22233555555532
Q ss_pred cCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccccc
Q 016507 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180 (388)
Q Consensus 101 ~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa 180 (388)
... .|+|+||+++|...++++|+++++++||
T Consensus 100 ------------------------------~~~-------------------~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 ------------------------------FLS-------------------SGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred ------------------------------ccC-------------------CCceeeEEEcchhhccCCCCccChhhhh
Confidence 112 2499999999999999999999999999
Q ss_pred cccchhhhhHHHHHHhc------CCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 181 LLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 181 ~~~~~~~ta~~~l~~~~------~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+++.++.|||.+++... ++++|++|||+|+ |++|++++|+|++.++ ..+++.+++++.++++++|+++++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999976 9999999999999996 45555578999999999999999999
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHH--hcCcEEEEeee
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL--HSGKILMGSLF 331 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~i~g~~~ 331 (388)
++ +++.+.+.+.+.++||+||||+|+.. ....+.++..+ |+...++... +.....+....+ .+.+.+.....
T Consensus 210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
T KOG1198|consen 210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVG-DELANYKLDDLWQSANGIKLYSLGL 283 (347)
T ss_pred CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEecc-ccccccccccchhhhhhhhheeeee
Confidence 99 89999999988449999999999976 77888888886 8766555422 111111111000 11111111110
Q ss_pred c--------CCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEeeCC
Q 016507 332 G--------GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMGE 388 (388)
Q Consensus 332 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~~~ 388 (388)
. .....+.++.+.++++++ .+.+.+.+.||++++.+|++.+.++.. +|+++.+++
T Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~ie~g--kikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 284 KGVNYRWLYFVPSAEYLKALVELIEKG--KIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred eccceeeeeecCCHHHHHHHHHHHHcC--cccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 0 112356788999999999 455559999999999999999988554 699998764
No 97
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1e-35 Score=278.37 Aligned_cols=303 Identities=24% Similarity=0.368 Sum_probs=248.1
Q ss_pred cCCCCCeEEEEeecCCCCCCeEEEEEceeccCccccccc-ccCCCC--CCCCcccccceeEEEEEecCCCCCCCCCCEEe
Q 016507 23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99 (388)
Q Consensus 23 ~~~~~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~--~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~ 99 (388)
++++. +++.+++.|++.++||+||+.++++|++|+..+ .|..+. +.+|.++|+|++|+|+++|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34554 999999999999999999999999999999887 665422 23478999999999999999999999999997
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCcccc
Q 016507 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA 179 (388)
Q Consensus 100 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~a 179 (388)
... .|+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence 421 2499999999999999999998 223
Q ss_pred ccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCc
Q 016507 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK 259 (388)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 259 (388)
+....+++++++++. ..+++++++|||+|+|.+|.+++++|+.+|++.|+++.+++++.++++++|++++++.+. .
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~ 184 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E 184 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---c
Confidence 222267788888664 788999999999988999999999999999943999998999999999999999998766 6
Q ss_pred cHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCC-Ccc
Q 016507 260 SVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL-KAK 337 (388)
Q Consensus 260 ~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-~~~ 337 (388)
.+.+.+.+++.+ ++|++|||+|+......++++++++ |+++.+|... .....+++..+..+++.+.++..... ...
T Consensus 185 ~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (312)
T cd08269 185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGL 262 (312)
T ss_pred CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchh
Confidence 788888888877 9999999998877689999999997 9999998643 33445565566667888777643322 123
Q ss_pred CcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce--eEEEE
Q 016507 338 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVI 384 (388)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvv 384 (388)
+.++++++++.++.+.+...+.+.|+++++.+|++.+.++.. +|+++
T Consensus 263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 263 EGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 578899999999987765556788999999999999988753 58876
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=7.3e-36 Score=280.67 Aligned_cols=299 Identities=20% Similarity=0.252 Sum_probs=253.0
Q ss_pred eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCC
Q 016507 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCT 107 (388)
Q Consensus 29 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~ 107 (388)
+++++.|.|++.+++|+||+.++++|+.|+.++.+.... ..+|.++|||++|+|+++|++++.+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888999999999999999999999988776532 345789999999999999999999999999974310
Q ss_pred CCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccccccccchhh
Q 016507 108 ECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187 (388)
Q Consensus 108 ~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ 187 (388)
.|+|++|+.++...++++|+++++.+++.+++.+.
T Consensus 90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 14999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHH
Q 016507 188 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIII 266 (388)
Q Consensus 188 ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~ 266 (388)
+||.++.....+.++++|||+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|++++++.++ ..+.+.+.
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~ 200 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVK 200 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHH
Confidence 99998877778899999999987 9999999999999999 8899988999999999999999999876 56788888
Q ss_pred hhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCc-------cC
Q 016507 267 DMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KS 338 (388)
Q Consensus 267 ~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~ 338 (388)
+.+++ ++|++|||+|+.. ....+++++++ |+++.+|..... ...++...+..++..+.+..+..+.. .+
T Consensus 201 ~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (323)
T cd05282 201 EATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQE 277 (323)
T ss_pred HHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHH
Confidence 88877 9999999999977 77889999997 999999875433 44566666555799999887655421 13
Q ss_pred cHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 339 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
.++++++++.++.+.+ .+.+.|+++++.+|++.+.++.. +|+|++
T Consensus 278 ~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 278 TFAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 5777888998997654 36789999999999999987665 488764
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-35 Score=278.56 Aligned_cols=312 Identities=23% Similarity=0.325 Sum_probs=249.9
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
||++++..++.+ +.+.+.+.|.+.++||+||+.++++|++|+....|..+...+|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 688999877643 66778888888999999999999999999998888765556688999999999999995 57999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+.... .+|...+ |+|++|+.++..+++++|+++
T Consensus 79 Gd~V~~~~~------------------------~~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMG------------------------GMGRTFD-------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecC------------------------CCCCCCC-------------------cccceEEEcCHHHcEeCCCCC
Confidence 999975421 0111122 499999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
++++++.+++++.|||.++.+...+.+|++|||+|+ |++|++++++|+.+|+ +|+++.+++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999998888788999999999997 9999999999999999 89999999999999999999888754
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCcc-ccCHHHH--HhcCcEEEEee
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEV--LHSGKILMGSL 330 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~--~~~~~~i~g~~ 330 (388)
. .++.+.++++ ++++|+++||+++.. +..++++++++ |+++.+|........ ....... +.+++.+.+..
T Consensus 195 -~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (320)
T cd08243 195 -D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSS 267 (320)
T ss_pred -C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecc
Confidence 3 4677778877 449999999999865 89999999997 999999864322111 1122222 24567776664
Q ss_pred ecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 331 FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
..... ...++++++++.++.+.+ ++.+.|+++++++|++.+.++.. +|+|+
T Consensus 268 ~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 268 SGDVP-QTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhhhh-HHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 32221 235788999999996654 36789999999999999987665 47775
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=3.2e-35 Score=276.45 Aligned_cols=311 Identities=18% Similarity=0.198 Sum_probs=244.7
Q ss_pred eeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCCC
Q 016507 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 18 ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
||+++...+.| ++++++|+|.+++++|+||+.++++|++|+..+.|.++. ..+|.++|||++|+|++ ++++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 67888777664 788999999999999999999999999999988887532 34588999999999998 56778999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+.... .+|...+ |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~------------------------~~~~~~~-------------------g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGY------------------------GLGVSHD-------------------GGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccC------------------------CCCCCCC-------------------ccceEEEEEchhheEECCCCC
Confidence 999975421 0222223 399999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHh--cCCCCCC-EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE
Q 016507 175 PPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~-~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v 250 (388)
++.+++.+++.+.+|+.++... +.+.+++ +|||+|+ |.+|++++++|+.+|+ +++++..++++.+.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999999999998765332 3478898 9999997 9999999999999999 78888788888899999999999
Q ss_pred EcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 016507 251 VNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (388)
++.++ ... .++.+..+++|+++||+|+.. +..++++++++ |+++.+|... .....++...++.+++++.+..
T Consensus 195 ~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T TIGR02823 195 IDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGID 266 (323)
T ss_pred Ecccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEe
Confidence 88654 222 445555557999999999875 89999999997 9999999753 2334445455667889988875
Q ss_pred ecCCCc---cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEEe
Q 016507 331 FGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 385 (388)
Q Consensus 331 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~ 385 (388)
...... .+.++.+.+++..+.+.. + .+.|+++++++|++.+.++... |+|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 267 SVYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred ccccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence 432211 112445666666775432 3 4689999999999999887654 88875
No 101
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-35 Score=276.75 Aligned_cols=298 Identities=21% Similarity=0.285 Sum_probs=243.3
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
||++++.+++ | +++.+.|.|.+.++||+||+.++++|++|++...+. ..|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 6899998754 3 777789999999999999999999999999876522 23678999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+... . .|+|++|+.++.++++++|+++
T Consensus 76 Gd~V~~~~------------------------------~-------------------~g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG------------------------------A-------------------MGAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec------------------------------C-------------------CcceeeEEEEchHHeEECCCCC
Confidence 99996320 1 2499999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
++++++++++.+.|||+++...... ++++|+|+|+ |++|.+++++++..|+ +|+++++++++.+.++++|++.+++.
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999987655544 5999999987 9999999999999999 89999999999999999998766543
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHh--cCcEEEEeee
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH--SGKILMGSLF 331 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~i~g~~~ 331 (388)
.. ++.++++|+++|++|+.. +..++++++.+ |+++.+|... .....++...+.. ++..+.++.+
T Consensus 185 ~~-----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (305)
T cd08270 185 GS-----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFL 250 (305)
T ss_pred cc-----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEc
Confidence 22 122247999999999875 89999999997 9999998753 3334455555544 5888888765
Q ss_pred cC-CCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 332 GG-LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 332 ~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. ....+.++.+++++.++++.+. +.++++++++++|++.+.++.. +|+|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 251 YDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 43 1113467889999999977643 6789999999999999987765 4988864
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=4.1e-35 Score=277.24 Aligned_cols=313 Identities=19% Similarity=0.155 Sum_probs=251.6
Q ss_pred eeeeeecCCCCC-----eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCC
Q 016507 17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (388)
Q Consensus 17 ~ka~~~~~~~~~-----~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~ 91 (388)
|||+++.+++.+ +...++|.|++.+++|+||+.++++|++|+..+.+..+...+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 589999998864 555678888889999999999999999999888776543446778999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 016507 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (388)
Q Consensus 92 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP 171 (388)
|++||+|..... ...+ |+|++|+.++.++++++|
T Consensus 81 ~~~Gd~V~~~~~---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGD---------------------------ITRP-------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCC---------------------------CCCC-------------------ccceEEEEEchHHeeeCC
Confidence 999999974210 0112 499999999999999999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCC-----CCEEEEEcc-chhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHH
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR 244 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~VlI~Ga-g~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~ 244 (388)
+++++++++.+++.+.|||.++.+.+.+.+ +++|+|+|+ |++|++++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998877788887 999999986 999999999999999 7 89999999999999999
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCc
Q 016507 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK 324 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 324 (388)
+|++++++.+. .+.+.+.....+++|++||+++....+..++++++.+ |+++.+|... ..++...+..++.
T Consensus 194 ~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~ 264 (336)
T cd08252 194 LGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSA 264 (336)
T ss_pred cCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcccc
Confidence 99999998653 3555665443338999999999766689999999997 9999998632 3344445546788
Q ss_pred EEEEeeecCCC---------ccCcHHHHHHHHhCCCCCCCcc-eeeeEecchHHHHHHHHhcCcee-EEEEe
Q 016507 325 ILMGSLFGGLK---------AKSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAFDLLIKGKCL-RCVIW 385 (388)
Q Consensus 325 ~i~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~~~~A~~~~~~~~~~-kvvv~ 385 (388)
.+.+..+.... ..+.++++++++.++.+.+... ..+.++++++.+|++.+.++... |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 265 SFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred eEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 88876543211 0134778899999997664311 12457999999999999887654 88764
No 103
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.6e-34 Score=269.22 Aligned_cols=310 Identities=22% Similarity=0.294 Sum_probs=256.1
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++.+++.+ +++.+.+.|.+.+++|+||+.++++|++|+....|.++. ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999886543 777788888889999999999999999999888776532 34678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~------------------------------~-------------------~g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL------------------------------A-------------------GGGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec------------------------------C-------------------CCceeEEEEcCHHHhccCCCC
Confidence 999997421 1 149999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.++..+.++|.++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++.+++++.+.++.+|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999997 9999999999999999 8999999889999998899988888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
... .++.+.+.+.+.+ ++|++||++|+.. +...++++.++ |+++.+|.... ....++...++.+++.+.++..
T Consensus 191 ~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd05276 191 YRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGG-AKAELDLAPLLRKRLTLTGSTL 264 (323)
T ss_pred CCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCC-CCCCCchHHHHHhCCeEEEeec
Confidence 776 6677778777766 8999999999877 88899999997 99999986432 2234555566678899988865
Q ss_pred cCCCc-------cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 332 GGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 332 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
..... ...+.++++++.++++.+ +.++.|+++++++|++.+.++.. +|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 265 RSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred cchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 44211 123566778888886643 46789999999999999887654 37663
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=3.9e-34 Score=268.39 Aligned_cols=316 Identities=24% Similarity=0.310 Sum_probs=256.7
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
||++++..++.+ +.+.++|.|.+.+++|+|++.++++|++|+....|.... ..+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888776543 888899999999999999999999999999988776542 45688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+..+.. .+ .. .|++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~------------------------~~-~~-------------------~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG------------------------WG-RR-------------------QGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc------------------------cC-CC-------------------CcceeeEEEecHHHcEeCCCC
Confidence 99999754210 00 01 249999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.+++++.+||+++....++.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.+.++|++++++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877789999999999986 9999999999999999 8999999999999999999999988
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
... .++.+.+.+.+.+ ++|++++|+++.. ....+++++.+ |+++.+|... ....+++..++.++..+.+...
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd08253 196 YRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLL 268 (325)
T ss_pred CCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeeh
Confidence 776 6677778777766 8999999999876 78889999997 9999998743 2334555555667777777653
Q ss_pred cCCC---ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 332 GGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 332 ~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.... ..+.++.+.+++.++.+. ...++.|++++++++++.+.++.. +|+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 269 YTATPEERAAAAEAIAAGLADGALR--PVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hhcCHHHHHHHHHHHHHHHHCCCcc--CccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 3211 112355566777777554 346789999999999999987665 4888753
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=6.1e-34 Score=266.35 Aligned_cols=310 Identities=23% Similarity=0.285 Sum_probs=253.8
Q ss_pred eeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCC
Q 016507 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (388)
Q Consensus 18 ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vG 95 (388)
||+.+..++.+ +.+.+.+.|.+.+++|+|+|.++++|++|+....+..+. .+|.++|||++|+|+.+|+++++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666655543 666677777789999999999999999999988876543 457789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCC
Q 016507 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (388)
Q Consensus 96 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~ 175 (388)
|+|+... . .|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~------------------------------~-------------------~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG------------------------------P-------------------PGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec------------------------------C-------------------CCceeEEEEecHHHceeCCCCCC
Confidence 9997421 0 24899999999999999999999
Q ss_pred ccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCC
Q 016507 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 176 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 254 (388)
..+++.+++.+.+++.++.+..++.++++|||+|+ |++|++++++++.+|+ +|+++++++++.++++++|++++++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999999999999998877888999999999996 9999999999999999 899999999999999999999998877
Q ss_pred CCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecC
Q 016507 255 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 333 (388)
Q Consensus 255 ~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (388)
+ ..+.+.+.+++.+ ++|++|+|+++.. ...++++++++ |+++.+|..... ...++...+..+++.+.+..+..
T Consensus 190 ~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 263 (320)
T cd05286 190 D---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFH 263 (320)
T ss_pred c---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhh
Confidence 6 6777888888776 8999999999864 88999999997 999999864322 23345545547788887654333
Q ss_pred CCc-----cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 334 LKA-----KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 334 ~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
+.. .+.+.++++++.++.+.+. ..+.|+++++.+|++.+.++.. +|+|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 264 YIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred hcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 221 1235568888888866543 6688999999999999987765 4888763
No 106
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=8.5e-34 Score=266.86 Aligned_cols=313 Identities=16% Similarity=0.160 Sum_probs=245.9
Q ss_pred eeeeeecCCCC--CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++.+++. .++++++|.|+|+++||+||+.++++|++|+....|.... ..+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998875 3888999999999999999999999999999988776532 34578899999999999 7778899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+.... . .|... .|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~--------------~----------~~~~~-------------------~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGW--------------G----------VGERH-------------------WGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCc--------------c----------CCCCC-------------------CCcceeEEEEchHHeeeCCCC
Confidence 9999975310 0 11111 249999999999999999999
Q ss_pred CCccccccccchhhhhHHHHH--HhcCCC-CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE
Q 016507 174 VPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~ 249 (388)
+++++++.+++.+++|+.++. +..... ++++|||+|+ |++|++++|+|+.+|+ +|++++.++++.++++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999887643 224455 5789999997 9999999999999999 8999888999999999999999
Q ss_pred EEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 016507 250 FVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (388)
Q Consensus 250 v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (388)
++++++ . ...++.++.+++|.++|++++.. +...+..++.+ |+++.+|... .....+++..++.++.++.+.
T Consensus 195 ~~~~~~---~--~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08288 195 IIDRAE---L--SEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAG-GADLPTTVMPFILRGVTLLGI 266 (324)
T ss_pred EEEcch---h--hHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecC-CCCCCcchhhhhccccEEEEE
Confidence 998765 2 22455565557999999999854 77888889986 9999999753 223334555555779999987
Q ss_pred eecCCCc---cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEEee
Q 016507 330 LFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 386 (388)
Q Consensus 330 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~~ 386 (388)
....... .+.++.+++++.++.+.+ +.+.++++++++|++.+.+++.. |+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 267 DSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred EeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 6433221 224556667777775543 36899999999999998877654 888763
No 107
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.6e-34 Score=274.86 Aligned_cols=310 Identities=21% Similarity=0.251 Sum_probs=239.7
Q ss_pred eeeeeecCCCCC---eEEEEeecCCC-CCCeEEEEEceeccCcccccccccCCC---------------CCCCCcccccc
Q 016507 17 CRAAIATAPGEP---LVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDF---------------PAVFPRILGHE 77 (388)
Q Consensus 17 ~ka~~~~~~~~~---~~~~~~~~p~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~v~G~e 77 (388)
|||+++.+++++ +++++++.|+| +++||+||+.++++|++|+....|... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999888875 88899999999 499999999999999999998877421 23558899999
Q ss_pred eeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccccccee
Q 016507 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157 (388)
Q Consensus 78 ~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 157 (388)
++|+|+++|+++++|++||+|+..+.. +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999753210 0124999
Q ss_pred eeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCC----CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEE
Q 016507 158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (388)
Q Consensus 158 ~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 232 (388)
+|+.++.++++++|+++++.+++.+++.+.|||+++.....+.+ |++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998766666654 999999996 9999999999999999 78887
Q ss_pred cCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCc-
Q 016507 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ- 311 (388)
Q Consensus 233 ~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~- 311 (388)
.++ ++.+.++.+|++++++..+ ..+.+.+... +++|++||++|+.. ...++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~ 265 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVTLVSPLLKNTD 265 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEEecCCcccccc
Confidence 654 6778888999998988765 4555554432 38999999999884 89999999997 99999985421111
Q ss_pred -cccC---H---HHHHh-------cCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcC
Q 016507 312 -LSLS---S---FEVLH-------SGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 377 (388)
Q Consensus 312 -~~~~---~---~~~~~-------~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~ 377 (388)
..+. . ..+.. +...+.... .....+.+.++++++.++.+. .++++.|+++++.+|++.+.++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~ 341 (350)
T cd08248 266 KLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIK--PVIDKVFPFEEVPEAYEKVESG 341 (350)
T ss_pred cccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEe--cccceeecHHHHHHHHHHHhcC
Confidence 1110 0 01111 111111000 111235688899999999654 3477999999999999998876
Q ss_pred ce-eEEEEe
Q 016507 378 KC-LRCVIW 385 (388)
Q Consensus 378 ~~-~kvvv~ 385 (388)
.. +|++++
T Consensus 342 ~~~~~vv~~ 350 (350)
T cd08248 342 HARGKTVIK 350 (350)
T ss_pred CCceEEEeC
Confidence 64 487763
No 108
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.6e-34 Score=266.80 Aligned_cols=311 Identities=22% Similarity=0.258 Sum_probs=253.0
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC-CCCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++.+++.+ +++++.+.|.+.+++|+|++.++++|++|+.+..+... ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 699999888765 77888888888999999999999999999988877643 233577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+.... |+.. ..|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~~------------------~~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLGG------------------LQGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcCC------------------CCCceeEEEEecHHHcccCCCC
Confidence 9999974310 0000 0248999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.+++.+.+||+++.+..++.++++++|+|+ |.+|++++++++.+|+ +|+++.++ ++.++++.+|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999999999998878889999999999986 9999999999999999 88888887 8889999999998888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
... . +.+.+.+.+.+ ++|+++||+++.. ...++++++++ |+++.+|... ..++.....+++.+.+..+
T Consensus 195 ~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~ 263 (326)
T cd08272 195 YRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA-----THDLAPLSFRNATYSGVFT 263 (326)
T ss_pred cch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC-----ccchhhHhhhcceEEEEEc
Confidence 766 5 77888888877 8999999999865 88899999996 9999998642 1222223356787777653
Q ss_pred cC--C------CccCcHHHHHHHHhCCCCCCCccee-eeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 332 GG--L------KAKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 332 ~~--~------~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. . ...+.+..+++++.++.+. ++++ +.|++++++++++.+.++.. +|+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 264 LLPLLTGEGRAHHGEILREAARLVERGQLR--PLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccccchhhHHHHHHHHHHHHHCCCcc--cccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 32 1 0123577788888888654 3444 88999999999999887654 4888764
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5e-34 Score=268.14 Aligned_cols=310 Identities=24% Similarity=0.329 Sum_probs=248.0
Q ss_pred eeeeeecCCC--CCeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCC
Q 016507 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 17 ~ka~~~~~~~--~~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
|||+++.+++ +.+.+.++|.|++.+++|+||+.++++|++|+....+......+|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999998 35999999999999999999999999999999888776543334778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+.... +.. .|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~---------------------------~~~-------------------~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHAS---------------------------LAR-------------------GGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccC---------------------------CCC-------------------CccceeEEEeCHHHeEECCCCC
Confidence 999975311 111 2399999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcC
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 253 (388)
+..+++.+.+.+.+|+.++.+.+.+.+|++|+|+|+ |.+|++++++++..|+ +|+++. ++++.+.+..+|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999998878888999999999998 8999999999999999 787776 6777888888999999987
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
.. ..+.+.+.+.+.+ ++|++++|+++.. ....++++++. |+++.++..... . ... .+.+++.+....+.
T Consensus 193 ~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~---~~~-~~~~~~~~~~~~~~ 262 (325)
T cd08271 193 ND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDA-S---PDP-PFTRALSVHEVALG 262 (325)
T ss_pred CC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCC-c---chh-HHhhcceEEEEEec
Confidence 76 6677788888776 8999999999876 67789999997 999999753221 1 111 12233333332221
Q ss_pred CC----------CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 333 GL----------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 333 ~~----------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.. ...+.+.++++++.++.+.+ +..+.|+++++.+|++.+.++.. +|+++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 263 AAHDHGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 11 11123567888888886543 35688999999999999987665 4888763
No 110
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=6.8e-34 Score=248.91 Aligned_cols=299 Identities=21% Similarity=0.218 Sum_probs=244.4
Q ss_pred eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEe--cCCCCCCCCCCEEeecCCCCC
Q 016507 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESV--GENVDGVVEGDVVIPHFLADC 106 (388)
Q Consensus 29 ~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~v--G~~v~~~~vGd~V~~~~~~~~ 106 (388)
|+++++++|+|+.||||||+.|.++.|.....+.- .+..-.|.-+|-..+|.++.. -|..++|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 99999999999999999999999999965433322 223334677777777655543 3567789999999742
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCc--cccccccc
Q 016507 107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP--NRACLLSC 184 (388)
Q Consensus 107 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~--~~aa~~~~ 184 (388)
.+|++|..++.+.+.|++++.-+ .....+..
T Consensus 101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 29999999999999999865322 22234667
Q ss_pred hhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcCCCCCCccHH
Q 016507 185 GVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVS 262 (388)
Q Consensus 185 ~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~ 262 (388)
+..|||.+|...+..++|++|+|.|| |++|..+.|+||..|+ +|+++..+++|.+++.+ +|.|.++|++. +++.
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~ 209 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFA 209 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHH
Confidence 88999999999999999999999987 9999999999999999 99999999999999998 99999999999 8999
Q ss_pred HHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCC--CCC---ccccCHHHHHhcCcEEEEeeec-CCCc
Q 016507 263 QIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ--PGS---QLSLSSFEVLHSGKILMGSLFG-GLKA 336 (388)
Q Consensus 263 ~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~--~~~---~~~~~~~~~~~~~~~i~g~~~~-~~~~ 336 (388)
+.+.+..+.|.|+.||++|++. ++..+..|+.. ++++.+|... +.. .-+-.+..++.+.+++.|+.+. .+..
T Consensus 210 ~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~ 287 (340)
T COG2130 210 QALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQ 287 (340)
T ss_pred HHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhh
Confidence 9999999889999999999998 99999999996 9999999642 111 1233445667789999999883 3321
Q ss_pred --cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEEeeCC
Q 016507 337 --KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWMGE 388 (388)
Q Consensus 337 --~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv~~~~ 388 (388)
.+..+++..++++|++..+. +-+-+||.+++||.-|.+++.+ |.|+++.+
T Consensus 288 ~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 288 RFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 24577899999999888773 4445799999999999998875 99999864
No 111
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.7e-33 Score=266.55 Aligned_cols=316 Identities=18% Similarity=0.220 Sum_probs=235.1
Q ss_pred eeeeecCCCCCeEEEEeecCCC---CCCeEEEEEceeccCcccccccccCCCCCC-CCcccccceeEEEEEecCCCC-CC
Q 016507 18 RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPAV-FPRILGHEAIGVVESVGENVD-GV 92 (388)
Q Consensus 18 ka~~~~~~~~~~~~~~~~~p~~---~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-~p~v~G~e~~G~Vv~vG~~v~-~~ 92 (388)
|++++.+++.++++++++.|.| ++++|+||+.++++|++|+..+.+...... +|.++|+|++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888887777766 899999999999999999987765332222 377899999999999999998 89
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecC----ceE
Q 016507 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA----HVV 168 (388)
Q Consensus 93 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~----~~~ 168 (388)
++||+|+......| + . .|+|++|+.++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~-----------------------~--~-------------------~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY-----------------------G--G-------------------QGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC-----------------------C--C-------------------CceeeEEEEEccccccceeE
Confidence 99999975422110 0 1 2499999999987 799
Q ss_pred EcCCCCCccccccccchhhhhHHHHHHhc-CCCCCCEEEEEcc-chhHHHHHHHHHHcCC-cEEEEEcCCchHHHHHHHc
Q 016507 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF 245 (388)
Q Consensus 169 ~lP~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~l 245 (388)
++|+++++.+++.+++.+.|||+++.... .+++|++|+|+|+ |.+|++++++|+.+|. +.|+++. ++++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999876666 7999999999987 8999999999998754 3577775 45556678889
Q ss_pred CCcEEEcCCCCCCcc---HHHHHHhhcC-C-CccEEEEccCCHHHHHHHHHHhh---cCCceEEEEccCCCCC--ccc--
Q 016507 246 GVTEFVNSKNCGDKS---VSQIIIDMTD-G-GADYCFECVGLASLVQEAYACCR---KGWGKTIVLGVDQPGS--QLS-- 313 (388)
Q Consensus 246 ga~~v~~~~~~~~~~---~~~~i~~~~~-g-~~dvvid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~--~~~-- 313 (388)
|++++++.++ .+ +...+.+.+. + ++|++|||+|+......++++++ ++ |+++.++...... ...
T Consensus 197 g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~ 272 (352)
T cd08247 197 GADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFN 272 (352)
T ss_pred CCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhh
Confidence 9999998766 33 4444444433 4 89999999999655889999999 97 9999875322110 000
Q ss_pred ------cCHHHHH----hcCcEEEEeeecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEE
Q 016507 314 ------LSSFEVL----HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRC 382 (388)
Q Consensus 314 ------~~~~~~~----~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kv 382 (388)
+....+. .+...+....... ..+.++++++++.++.+. +++++.++++++++|++.+.++.. +|+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkv 348 (352)
T cd08247 273 SWDNPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNRAKGKV 348 (352)
T ss_pred hccccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCCCCCcE
Confidence 0111111 1122222111111 124578899999999654 446789999999999999987765 488
Q ss_pred EEee
Q 016507 383 VIWM 386 (388)
Q Consensus 383 vv~~ 386 (388)
++++
T Consensus 349 vi~~ 352 (352)
T cd08247 349 VIKV 352 (352)
T ss_pred EEeC
Confidence 8753
No 112
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1.8e-33 Score=265.19 Aligned_cols=306 Identities=21% Similarity=0.219 Sum_probs=242.6
Q ss_pred eeeeeecCCCC------CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC---CCCCCcccccceeEEEEEecC
Q 016507 17 CRAAIATAPGE------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGE 87 (388)
Q Consensus 17 ~ka~~~~~~~~------~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~Vv~vG~ 87 (388)
.||+++...++ .++++++|.|++.+++|+||+.++++|+.|.....+... +...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777755431 288899999999999999999999999987655444321 112346789999999999996
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-Cc
Q 016507 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AH 166 (388)
Q Consensus 88 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~ 166 (388)
+ +|++||+|+.. ++|++|+.++. +.
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 5 79999999631 28999999999 99
Q ss_pred eEEcCCCCC--cccccc-ccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH
Q 016507 167 VVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (388)
Q Consensus 167 ~~~lP~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 242 (388)
++++|++++ +.+++. +++.+.|||+++.+...+.++++|||+|+ |++|++++++|+..|+ +|+++++++++.+++
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999995 445555 88899999998877788999999999985 9999999999999999 899999999999999
Q ss_pred HH-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCcc----ccCHH
Q 016507 243 KR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL----SLSSF 317 (388)
Q Consensus 243 ~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~ 317 (388)
++ +|++++++.++ .++.+.+.+++++++|++|||+|+.. +..++++++++ |+++.+|........ .++..
T Consensus 187 ~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~ 261 (329)
T cd05288 187 VEELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLG 261 (329)
T ss_pred HhhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHH
Confidence 88 99999998876 66778888777558999999999865 89999999997 999999864322211 13345
Q ss_pred HHHhcCcEEEEeeecCCCc--cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 318 EVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
.++.++..+.+..+..+.. .+.+.++++++.++.+.+. ....++++++.++++.+.++.. +|+|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 262 NIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR--EDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc--ccccccHHHHHHHHHHHhcCCCccceeC
Confidence 5667788888876433211 2356778899999977655 3355899999999999887655 37763
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-33 Score=265.96 Aligned_cols=307 Identities=25% Similarity=0.313 Sum_probs=240.4
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
.||+++...+.+ +++.+.+.|.|.+++|+|++.++++|++|+.++.|..+. ..+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 378899887754 888889999999999999999999999999988876543 35688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|..... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (331)
T cd08273 81 VGDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEG 111 (331)
T ss_pred CCCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCC
Confidence 9999974210 138999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.+++.+.+||+++.....+.++++|+|+|+ |++|++++++|+..|+ +|+++.. +++.++++++|+.. ++
T Consensus 112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~ 188 (331)
T cd08273 112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID 188 (331)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence 9999999999999999998877788999999999997 9999999999999999 8888887 88888888899764 44
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccC--H------------HH
Q 016507 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS--S------------FE 318 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~------------~~ 318 (388)
... .++.+. +...+++|+++||+++.. ...++++++.+ |+++.+|.........+. . ..
T Consensus 189 ~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (331)
T cd08273 189 YRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLL 261 (331)
T ss_pred CCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcce
Confidence 443 334333 333348999999999987 89999999997 999999865322221111 1 01
Q ss_pred HHhcCcEEEEeeecCC----CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 319 VLHSGKILMGSLFGGL----KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 319 ~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
...++..+.+...... ...+.++++++++.++.+. +++.+.|+++++++|++.+.++.. +|+|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 262 PTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR--PKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred eccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 1122233333221100 0124677899999999664 447789999999999999887665 47765
No 114
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9e-33 Score=259.60 Aligned_cols=316 Identities=26% Similarity=0.325 Sum_probs=254.1
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+++...+.+ +.+.+.+.|.+.+++++|+|.++++|++|+....+.... ..+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 688888876543 777788888889999999999999999999888776532 34577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+..+.. ++... |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~-------------------------~~~~~-------------------g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAA-------------------------DLGQY-------------------GTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEecccc-------------------------ccCCC-------------------ccceEEEEechHhcEeCCCC
Confidence 99999753210 11112 49999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.+++.+.+||.++.....+.++++|+|+|+ |.+|++++++++..|+ +++.+++++++.+.++.+|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877888999999999987 9999999999999999 8999988899999888899988888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
.+. ..+.+.+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|.... ....++....+.++..+.+..+
T Consensus 196 ~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (328)
T cd08268 196 TDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSL 269 (328)
T ss_pred cCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEec
Confidence 776 6677778777776 8999999999965 88999999997 99999986433 2334554445677888888764
Q ss_pred cCCC-ccC----cHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 332 GGLK-AKS----DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 332 ~~~~-~~~----~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
.... ..+ .++.+.+++.++.+.+ +..+.|+++++.++++.+.++.. +|+|++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 270 DEITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 4321 111 2444555666775543 36788999999999999887665 488875
No 115
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.1e-33 Score=256.88 Aligned_cols=268 Identities=31% Similarity=0.456 Sum_probs=223.3
Q ss_pred eEEEEEceeccCcccccccccCCC-CCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCC
Q 016507 43 EVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (388)
Q Consensus 43 eVlVkv~~~~i~~~D~~~~~g~~~-~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~ 121 (388)
||+|||.++++|++|+..+.|..+ ...+|.++|||++|+|+++|++++.|++||+|+..+...|+.|..|+. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999888764 345688999999999999999999999999999999999999999997 676
Q ss_pred CCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCC
Q 016507 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (388)
Q Consensus 122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 201 (388)
.... .+.... |+|++|+.++.+.++++|+++++++++.+++++.|||+++.....+.+
T Consensus 77 ~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LGEGLD-------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---eccccC-------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 5443 333333 499999999999999999999999999999999999998877766799
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEcc
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECV 280 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~ 280 (388)
+++|||+|+|++|++++++++..|. +|+++++++++.++++++|++++++..+ ..+.+.+. .+.+ ++|++|+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~ 209 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAV 209 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECC
Confidence 9999999985599999999999998 9999999999999999999999988776 55666665 4444 899999999
Q ss_pred CCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHH
Q 016507 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKR 346 (388)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 346 (388)
+.......++++++++ |+++.+|....... .......+.+++.+.++....+ .++++++++
T Consensus 210 ~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 210 GGPETLAQALRLLRPG-GRIVVVGGTSGGPP-LDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CCHHHHHHHHHhcccC-CEEEEEccCCCCCC-cccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 9955589999999997 99999997543322 2224456778999999875443 456666654
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=7.5e-33 Score=259.79 Aligned_cols=311 Identities=22% Similarity=0.267 Sum_probs=255.6
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~ 93 (388)
|||+.+..++.+ +.+.+.+.|.+++++++||+.++++|++|+....+.+.. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 688888776654 666777777789999999999999999999888775532 34578999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCC
Q 016507 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (388)
Q Consensus 94 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~ 173 (388)
+||+|+... . .|+|++|+.++...++++|++
T Consensus 81 ~Gd~V~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV------------------------------A-------------------GGGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc------------------------------C-------------------CCcceeEEEecHHHcEeCCCC
Confidence 999997420 0 138999999999999999999
Q ss_pred CCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 174 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
+++.+++.+++.+.|+|.++.+...+.++++|+|+|+ |++|.+++++++..|+ +|+++.+++++.+.++.+|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998878889999999999996 9999999999999999 8999988898888888899988888
Q ss_pred CCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeee
Q 016507 253 SKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 331 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (388)
... .++.+.+.+...+ ++|++++++++.. ...++++++++ |+++.+|....... .+++..++.+++.+.+...
T Consensus 191 ~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (325)
T TIGR02824 191 YRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTL 264 (325)
T ss_pred cCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEeh
Confidence 766 6677788877776 8999999999865 88999999997 99999986432222 5566666688999998875
Q ss_pred cCCCc-------cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEe
Q 016507 332 GGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 385 (388)
Q Consensus 332 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~ 385 (388)
..... ...+.++++++.++.+. +++++.|+++++.++++.+.++.. +|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 265 RARPVAEKAAIAAELREHVWPLLASGRVR--PVIDKVFPLEDAAQAHALMESGDHIGKIVLT 324 (325)
T ss_pred hhcchhhhHHHHHHHHHHHHHHHHCCccc--CccccEEeHHHHHHHHHHHHhCCCcceEEEe
Confidence 44211 12345677888888654 346788999999999999887655 488875
No 117
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=7.4e-32 Score=252.70 Aligned_cols=309 Identities=25% Similarity=0.394 Sum_probs=252.1
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCC-CeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~ 92 (388)
|+|+++..++.+ +++.+.+ |.+.+ ++++||+.++++|++|+..+.|.+.. ..+|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 689998755433 7777777 76664 99999999999999999988776532 3446789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCC
Q 016507 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (388)
Q Consensus 93 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~ 172 (388)
++||+|+... . .|++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT------------------------------G-------------------QGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec------------------------------C-------------------CceeEEEEEcCHHHceeCCC
Confidence 9999997431 0 14899999999999999999
Q ss_pred CCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE
Q 016507 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (388)
Q Consensus 173 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 251 (388)
+++..+++.+...+.+|+.++.+...+.++++|+|+|+ |++|++++++++..|+ +|++++.++++.++++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999998899899999998777788999999999997 9999999999999999 799999999999999999998888
Q ss_pred cCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEee
Q 016507 252 NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (388)
+... .++.+.+.+.+.+ ++|++++++|+.. +..++++++++ |+++.+|..... ...++....+.++.++.+..
T Consensus 190 ~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 263 (323)
T cd08241 190 DYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGE-IPQIPANLLLLKNISVVGVY 263 (323)
T ss_pred ecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCC-cCcCCHHHHhhcCcEEEEEe
Confidence 8776 6788888888777 8999999999854 88999999997 999999864321 11234444566788888876
Q ss_pred ecCCCc------cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 331 FGGLKA------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 331 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
...+.. .+.+.++++++.++.+. ++.++.|+++++.++++.+.++.. +|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 322 (323)
T cd08241 264 WGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKATGKVVL 322 (323)
T ss_pred cccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 544321 23567788899888654 447789999999999998887655 47776
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=2.1e-32 Score=255.00 Aligned_cols=301 Identities=21% Similarity=0.289 Sum_probs=241.4
Q ss_pred eeeeeecCCCCC--eEEEEeecCCCCCCeEEEEEceeccCcccccccccCCC---CCCCCcccccceeEEEEEecCCCCC
Q 016507 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG 91 (388)
Q Consensus 17 ~ka~~~~~~~~~--~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~ 91 (388)
|||+++..++.. +.+++.+.|.+++++|+||+.++++|++|+..+.|... ...+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 689998877753 55677788888999999999999999999998877642 3345889999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcC
Q 016507 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (388)
Q Consensus 92 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP 171 (388)
+++||+|+..+.. .. .|+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~---------------------------~~-------------------~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF---------------------------TR-------------------GGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC---------------------------CC-------------------CCcceeEEEecHHHhccCC
Confidence 9999999753210 00 1499999999999999999
Q ss_pred CCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE
Q 016507 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (388)
Q Consensus 172 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v 250 (388)
+++++..++.+++.+.+++.++.+...+.++++|+|+|+ |.+|++++++++..|+ +|+++..++ +.++++.+|++++
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998777677999999999997 9999999999999999 788887777 8888888998888
Q ss_pred EcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEe
Q 016507 251 VNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 329 (388)
Q Consensus 251 ~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 329 (388)
++.+. .++.+ .+.+ ++|+++|++++.. ...++++++++ |+++.+|..... .. ....++..+...
T Consensus 193 ~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~--~~----~~~~~~~~~~~~ 257 (309)
T cd05289 193 IDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPA--EQ----AAKRRGVRAGFV 257 (309)
T ss_pred EeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcc--hh----hhhhccceEEEE
Confidence 88765 34433 2333 8999999999885 89999999997 999999864321 11 233456666655
Q ss_pred eecCCCccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEE
Q 016507 330 LFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 384 (388)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv 384 (388)
.+... ...++.+++++.++.+ .+++++.|+++++++|++.+.++... |+++
T Consensus 258 ~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 258 FVEPD--GEQLAELAELVEAGKL--RPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred Eeccc--HHHHHHHHHHHHCCCE--EEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 43222 4578889999988864 34577899999999999998876543 6653
No 119
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=4.9e-32 Score=251.85 Aligned_cols=292 Identities=24% Similarity=0.317 Sum_probs=235.2
Q ss_pred cCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccC
Q 016507 36 VDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRS 114 (388)
Q Consensus 36 ~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~ 114 (388)
.|++.+++|+||+.++++|++|+..+.+.++. ..+|.++|+|++|+|+++|+++++|++||+|+....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 57889999999999999999999988876543 356889999999999999999999999999975311
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHH
Q 016507 115 KKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194 (388)
Q Consensus 115 ~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~ 194 (388)
..+ |+|++|+.++.+.++++|+++++++++.++..+.|||.++
T Consensus 71 -----------------~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 71 -----------------ESM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -----------------CCC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 011 4999999999999999999999999999999999999976
Q ss_pred HhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-C
Q 016507 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-G 272 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~ 272 (388)
+...+.++++|+|+|+ |.+|++++++++.+|+ +|+++.+++++.+.++.+|++.+++... .++.+.+.+.+++ +
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~ 189 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRG 189 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCC
Confidence 5788999999999975 9999999999999999 8999999999999999999999998876 6788888888877 8
Q ss_pred ccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC------ccCcHHHHHHH
Q 016507 273 ADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKR 346 (388)
Q Consensus 273 ~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~ 346 (388)
+|+++|++++.. ....+++++++ |+++.+|.........++... +.++..+....+.... ..+.+.+++++
T Consensus 190 ~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
T cd08251 190 VDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL 266 (303)
T ss_pred ceEEEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence 999999997654 88999999997 999999864322222334333 2334444433322111 12346678888
Q ss_pred HhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEE
Q 016507 347 YMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 384 (388)
Q Consensus 347 ~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv 384 (388)
+.++.+.+ +.++.|+++++.++++.+.++... |+++
T Consensus 267 ~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 267 VEEGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHCCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 88886543 467899999999999998876654 7763
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.5e-31 Score=250.10 Aligned_cols=311 Identities=22% Similarity=0.314 Sum_probs=246.2
Q ss_pred eeeeecCCCC--CeEEEEeecCCCCCCeEEEEEceeccCcccccccccCCCC-CCCCcccccceeEEEEEecCCCCCCCC
Q 016507 18 RAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (388)
Q Consensus 18 ka~~~~~~~~--~~~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~v~G~e~~G~Vv~vG~~v~~~~v 94 (388)
||+++...+. .+.+.+.+.|++.+++|+||+.++++|++|+..+.|.... +..|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4566655543 2777788888889999999999999999999988876532 345778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCC
Q 016507 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (388)
Q Consensus 95 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 174 (388)
||+|+... . .|+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLT------------------------------R-------------------FGGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEec------------------------------C-------------------CCeeeeEEEecHHHeEECCCCC
Confidence 99997431 0 1389999999999999999999
Q ss_pred CccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHc-CCcEEEEEcCCchHHHHHHHcCCcEEEc
Q 016507 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVN 252 (388)
Q Consensus 175 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 252 (388)
++.+++.+++.+.+||+++.+...+.++++|+|+|+ |.+|++++++|+.. +. .++.. ..+++.++++.+|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999999999999998888888999999999997 99999999999998 33 33322 2355778888899998988
Q ss_pred CCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCc---------------cccCHH
Q 016507 253 SKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ---------------LSLSSF 317 (388)
Q Consensus 253 ~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~---------------~~~~~~ 317 (388)
.+. ..+.+.+++.+++++|+++||+|+.. ...++++++++ |+++.+|....... ..+...
T Consensus 190 ~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (337)
T cd08275 190 YRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPM 264 (337)
T ss_pred CCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHH
Confidence 876 67778888777558999999999875 88999999997 99999986432111 122234
Q ss_pred HHHhcCcEEEEeeecCCCc-----cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 318 EVLHSGKILMGSLFGGLKA-----KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 318 ~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
.++.++..+.++.+..... ...+.++++++.++.+.+ +.++.|++++++++++.+.++.. +|+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 265 KLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 5567788888876542211 123667888888886543 46789999999999999887665 4888864
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.3e-30 Score=244.36 Aligned_cols=295 Identities=23% Similarity=0.263 Sum_probs=226.5
Q ss_pred EEEEeecCCCCCCeEEEEEceeccCcccccccccCCC---CCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCC
Q 016507 30 VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADC 106 (388)
Q Consensus 30 ~~~~~~~p~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~ 106 (388)
++.+.|.|++++++|+|++.++++|++|+..+.|..+ ...+|.++|||++|+|+++|++++++++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 7778899999999999999999999999998877652 12346789999999999999999999999999753210
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccccccccchh
Q 016507 107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186 (388)
Q Consensus 107 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ 186 (388)
.. .|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 93 -------------------------~~-------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KG-------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CC-------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 01 1499999999999999999999999999999999
Q ss_pred hhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHH
Q 016507 187 STGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQII 265 (388)
Q Consensus 187 ~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i 265 (388)
.+||+++.....+.++++|+|+|+ |++|++++++|+.+|+ +|+++.++ ++.+.++.+|++++++.+. .++.
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~--- 200 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV--- 200 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence 999998877777999999999997 9999999999999999 88888765 7888889999988888765 3333
Q ss_pred HhhcCC-CccEEEEccCCH-HHHHHHHHHhhcCCceEEEEccCCCCCcccc---CHHHHHhcCcEEEEeeecCCCccCcH
Q 016507 266 IDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDI 340 (388)
Q Consensus 266 ~~~~~g-~~dvvid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~~~ 340 (388)
...+.+ ++|++++|+++. ......+..++++ |+++.+|.......... ....... ...+....... ..+.+
T Consensus 201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~ 276 (319)
T cd08267 201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGG-GRRLKFFLAKP--NAEDL 276 (319)
T ss_pred hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccc-cceEEEEEecC--CHHHH
Confidence 334444 899999999853 2234444458896 99999986432222211 1111111 22222222111 14678
Q ss_pred HHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCcee-EEEE
Q 016507 341 PILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 384 (388)
Q Consensus 341 ~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv 384 (388)
.++++++.++.+. +++++.|+++++++|++.+.++... |+++
T Consensus 277 ~~~~~~l~~~~~~--~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 277 EQLAELVEEGKLK--PVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHHHCCCee--eeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 8899999988654 3477999999999999999876543 6653
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.98 E-value=1.8e-30 Score=239.44 Aligned_cols=282 Identities=23% Similarity=0.246 Sum_probs=230.5
Q ss_pred CeEEEEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCC
Q 016507 42 HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (388)
Q Consensus 42 ~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~ 121 (388)
+||+||+.++++|++|++...|..+ .+|.++|||++|+|+++|++++.|++||+|....
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 5899999999999999999887652 4578999999999999999999999999997421
Q ss_pred CCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCC
Q 016507 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (388)
Q Consensus 122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 201 (388)
.|+|++|+.++.+.++++|+++++.+++.+++.+.|++.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 2499999999999999999999999999999999999998877788999
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcC--CcEEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg--a~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvi 277 (388)
|++|+|+|+ |.+|++++++++.+|+ +|+++.+++++.++++.++ ++.+++... .++.+.+.+.+.+ ++|+++
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi 184 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVL 184 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEE
Confidence 999999975 9999999999999999 8999988889999998888 788888766 6788888888777 899999
Q ss_pred EccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC------ccCcHHHHHHHHhCCC
Q 016507 278 ECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKE 351 (388)
Q Consensus 278 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~~ 351 (388)
|++++. ....++++++++ |+++.+|.........+.... +.++..+....+.... ..+.+.++++++.++.
T Consensus 185 ~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (293)
T cd05195 185 NSLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGV 261 (293)
T ss_pred eCCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCC
Confidence 999998 499999999997 999999864322112233222 3346666655433221 1224677888888886
Q ss_pred CCCCcceeeeEecchHHHHHHHHhcCcee-EEEE
Q 016507 352 LELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 384 (388)
Q Consensus 352 ~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvv 384 (388)
+. ++.++.++++++.++++.+.++... |+|+
T Consensus 262 ~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 262 LK--PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred cc--cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 54 4567889999999999999877654 7663
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=2.5e-30 Score=238.16 Aligned_cols=277 Identities=21% Similarity=0.281 Sum_probs=225.6
Q ss_pred EEEceeccCcccccccccCCCCCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCC
Q 016507 46 VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125 (388)
Q Consensus 46 Vkv~~~~i~~~D~~~~~g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~ 125 (388)
||+.++++|++|++...|.++ .|.++|||++|+|+++|++++.|++||+|...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~------------------------ 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL------------------------ 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE------------------------
Confidence 789999999999999887653 36789999999999999999999999999742
Q ss_pred CCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEE
Q 016507 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205 (388)
Q Consensus 126 ~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~V 205 (388)
..|+|++|+.++.+.++++|+++++.+++.+++.+.|+|.++.+...+.++++|
T Consensus 55 --------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 55 --------------------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred --------------------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 124999999999999999999999999999999999999987778889999999
Q ss_pred EEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC--cEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccC
Q 016507 206 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVG 281 (388)
Q Consensus 206 lI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g 281 (388)
+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|+ +.+++..+ .++.+.+.+.+.+ ++|+++|+++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~ 184 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLA 184 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCC
Confidence 99986 9999999999999999 89999999999999999998 78888766 6677788887776 8999999999
Q ss_pred CHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCC-----ccCcHHHHHHHHhCCCCCCCc
Q 016507 282 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKELELDK 356 (388)
Q Consensus 282 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 356 (388)
+. ....++++++++ |+++.+|.........++... +.++..+.+..+.... ..+.+.++++++.++.+.+.
T Consensus 185 ~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 260 (288)
T smart00829 185 GE-FLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL- 260 (288)
T ss_pred HH-HHHHHHHhccCC-cEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc-
Confidence 64 488999999997 999999864322222334333 3456666665433211 11246678888888876543
Q ss_pred ceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 357 FVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 357 ~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
..+.|++++++++++.+..+.. +|+++
T Consensus 261 -~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 261 -PVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred -CceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 5588999999999999887754 37653
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1e-27 Score=220.64 Aligned_cols=251 Identities=27% Similarity=0.405 Sum_probs=199.9
Q ss_pred cCCCCCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 016507 63 MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDL 142 (388)
Q Consensus 63 g~~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~ 142 (388)
|.++. ++|.++|||++|+|+++|+++++|++||+|+..
T Consensus 14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------- 51 (277)
T cd08255 14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------- 51 (277)
T ss_pred cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence 44443 478999999999999999999999999999742
Q ss_pred CCceecccccccceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHH
Q 016507 143 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 222 (388)
Q Consensus 143 ~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~ 222 (388)
+.|++|+.++.+.++++|+++++.+++.+ +++.|||+++ ..+++.++++|||+|+|++|++++++|+
T Consensus 52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~ 118 (277)
T cd08255 52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK 118 (277)
T ss_pred -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 26899999999999999999999999888 7899999976 5788999999999988999999999999
Q ss_pred HcCCcEEEEEcCCchHHHHHHHcC-CcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceE
Q 016507 223 LCGATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 300 (388)
Q Consensus 223 ~~g~~~Vi~~~~~~~~~~~~~~lg-a~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~ 300 (388)
.+|+++|+++++++++.++++++| ++.+++..+ ..+.+ ++|++||+++.......++++++++ |++
T Consensus 119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~ 186 (277)
T cd08255 119 AAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRV 186 (277)
T ss_pred HcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEE
Confidence 999944999999999999999999 555554322 11233 8999999999777689999999997 999
Q ss_pred EEEccCCCCCccccCHHHHHhcCcEEEEeeecCC---------CccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHH
Q 016507 301 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAF 371 (388)
Q Consensus 301 v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~ 371 (388)
+.+|..... . ......+..+.+.+.+..+... ...+.++++++++.++.+. +++.+.|+++++++|+
T Consensus 187 ~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~ 262 (277)
T cd08255 187 VLVGWYGLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFEDAPEAY 262 (277)
T ss_pred EEEeccCCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccccCccCHHHHHHHH
Confidence 999975432 1 1222334445667776654321 1125688999999999644 4467899999999999
Q ss_pred HHHhcC--ceeEEEE
Q 016507 372 DLLIKG--KCLRCVI 384 (388)
Q Consensus 372 ~~~~~~--~~~kvvv 384 (388)
+.+.++ ...|+++
T Consensus 263 ~~~~~~~~~~~k~~~ 277 (277)
T cd08255 263 RLLFEDPPECLKVVL 277 (277)
T ss_pred HHHHcCCccceeeeC
Confidence 999877 3348764
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=5.1e-28 Score=240.42 Aligned_cols=292 Identities=19% Similarity=0.193 Sum_probs=244.9
Q ss_pred eEEEEeecC---CCCCCeEEEEEceeccCcccccccccCCCCCCCC-------cccccceeEEEEEecCCCCCCCCCCEE
Q 016507 29 LVIDEVIVD---PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP-------RILGHEAIGVVESVGENVDGVVEGDVV 98 (388)
Q Consensus 29 ~~~~~~~~p---~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~p-------~v~G~e~~G~Vv~vG~~v~~~~vGd~V 98 (388)
++|.+-|.. +..++.=+.-|.|++||..|+....|..++...| .++|-||+|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 777776654 3356778999999999999999999988765444 4889999997 4559999
Q ss_pred eecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEcCCCCCccc
Q 016507 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 178 (388)
Q Consensus 99 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~ 178 (388)
+. +.+.. ++|+-+.++.+++|.+|+++.+++
T Consensus 1499 M~------------------------------mvpAk-------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MG------------------------------MVPAK-------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EE------------------------------eeehh-------------------hhhhhhhcchhhhhhCCcccchhh
Confidence 53 33333 889999999999999999999999
Q ss_pred cccccchhhhhHHHHHHhcCCCCCCEEEEE-ccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcEEEcC
Q 016507 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIF-GLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNS 253 (388)
Q Consensus 179 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~-Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~ 253 (388)
|+++||.|.|||++++.....++|++|||+ |+|++|++||.+|-+.|+ +|.-+..+.+|++++++ +...++-|+
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 469999999999999999 99999999999999875 445678888
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeec
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 332 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (388)
++ .+|+..++..|+| |+|+|++...... ++.+++||+.. |++..+|-..-.+..++.+.. +.+|.+++|..+.
T Consensus 1609 Rd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMav-fLkNvsfHGiLLD 1682 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAV-FLKNVSFHGILLD 1682 (2376)
T ss_pred cc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhh-hhcccceeeeehh
Confidence 88 8899999999999 9999999988877 99999999996 999999976555555566443 5669999999865
Q ss_pred CCC--ccCcHHHHHHHHhCCCCC--CCcceeeeEecchHHHHHHHHhcCce-eEEEEee
Q 016507 333 GLK--AKSDIPILLKRYMDKELE--LDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 386 (388)
Q Consensus 333 ~~~--~~~~~~~~~~~~~~~~~~--~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~ 386 (388)
..- ..+.+.++..++++|... ..++.+++|+-.++++||++|.++.. +|+|+++
T Consensus 1683 svmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1683 SVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred hhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 532 234577788888777543 56788999999999999999999876 5999975
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=6.1e-26 Score=198.38 Aligned_cols=293 Identities=21% Similarity=0.192 Sum_probs=225.6
Q ss_pred EeecC-CCCCCeEEEEEceeccCcccccccccCCCC-CCCCc-----ccccceeEEEEEecCCCCCCCCCCEEeecCCCC
Q 016507 33 EVIVD-PPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPR-----ILGHEAIGVVESVGENVDGVVEGDVVIPHFLAD 105 (388)
Q Consensus 33 ~~~~p-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~p~-----v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~ 105 (388)
+++++ ++++++||||.+|-+..|.....++-..+. .-.|+ +.| .++|+|++. +-+++++||.|...
T Consensus 28 ~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~S--~~~~~~~GD~v~g~---- 100 (343)
T KOG1196|consen 28 TVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVIDS--GHPNYKKGDLVWGI---- 100 (343)
T ss_pred eecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEec--CCCCCCcCceEEEe----
Confidence 44444 568899999999999988765544432222 11122 334 788999996 44689999999521
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCc--eEEcCC--CCCccccc-
Q 016507 106 CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVKVDP--TVPPNRAC- 180 (388)
Q Consensus 106 ~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~--~~~lP~--~~~~~~aa- 180 (388)
=+|.||.+++... .+++|. ++++....
T Consensus 101 ------------------------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 101 ------------------------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred ------------------------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 1899999997653 444443 45554433
Q ss_pred cccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcCCCCCC
Q 016507 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGD 258 (388)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~ 258 (388)
++..+.+|||..+++.+..++|++|+|-|| |++|+.+.|+|+.+|+ +|++++.+++|.+++++ +|.+.++|+++ .
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e 209 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--E 209 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--c
Confidence 567788999999999999999999999987 9999999999999999 99999999999999876 79999999998 2
Q ss_pred ccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCC----CCCccccCHHHHHhcCcEEEEeeecCC
Q 016507 259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ----PGSQLSLSSFEVLHSGKILMGSLFGGL 334 (388)
Q Consensus 259 ~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~----~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (388)
.++.+++++..+.+.|+.||.+|+.. ++..+..|+.. |+++.+|... .....--++..++.|.+++.|+....+
T Consensus 210 ~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 210 SDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred cCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence 37888888877779999999999998 99999999995 9999999643 111112344566788999999887665
Q ss_pred Cc--cCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEEeeC
Q 016507 335 KA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 387 (388)
Q Consensus 335 ~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv~~~ 387 (388)
.. .+.++.+..++++|+|....-+ .-.|+..++||.-|.++.. +|.++++.
T Consensus 288 ~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 288 LDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence 42 3346778888999988665322 2369999999999988775 59888765
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.91 E-value=1.6e-24 Score=170.22 Aligned_cols=108 Identities=35% Similarity=0.541 Sum_probs=96.1
Q ss_pred CCeEEEEEceeccCcccccccccC-CCCCCCCcccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCC
Q 016507 41 SHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNL 119 (388)
Q Consensus 41 ~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~p~v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~ 119 (388)
|+||||||.++|||++|+++++|. .....+|.++|||++|+|+++|++++.|++||+|++.+...|+.|.+|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 799999999999999999999993 4556789999999999999999999999999999999988899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecCceEEc
Q 016507 120 CSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (388)
Q Consensus 120 c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l 170 (388)
|..... +|+..+| +||||+.++.++++++
T Consensus 81 c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 987765 6766667 9999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.76 E-value=9.8e-18 Score=136.08 Aligned_cols=129 Identities=28% Similarity=0.490 Sum_probs=117.2
Q ss_pred hhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHH
Q 016507 212 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 290 (388)
Q Consensus 212 ~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~ 290 (388)
++|++++|+|+++|+ +|++++++++|+++++++|+++++++++ .++.+.+++++++ ++|+||||+|....++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999998 7799999999998 9999999999888899999
Q ss_pred HHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHHHHHhC
Q 016507 291 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 349 (388)
Q Consensus 291 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 349 (388)
++++++ |+++.+|... ....+++...++.+++++.|++... .++++++++++++
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999997 9999999865 5778899999999999999997554 4788888888753
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.53 E-value=3.3e-13 Score=128.35 Aligned_cols=176 Identities=14% Similarity=0.166 Sum_probs=140.1
Q ss_pred HHHHHHhcCC-CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhh
Q 016507 190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 190 ~~~l~~~~~~-~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~ 268 (388)
+.++.+..++ .+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+. ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~---------~~e~v--- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT---------MEEAV--- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc---------HHHHH---
Confidence 4445555443 689999999999999999999999999 899999999999999999985331 12222
Q ss_pred cCCCccEEEEccCCHHHHHHH-HHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCccCcHH--HHHH
Q 016507 269 TDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILLK 345 (388)
Q Consensus 269 ~~g~~dvvid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~ 345 (388)
.++|+||+|+|....+... +..++++ |.++.+|.. +..++...+..+.+++.+++.... ..+++ +.++
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~ 326 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII 326 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence 2689999999998877765 9999997 999999853 456888888888999988864321 22455 7899
Q ss_pred HHhCCCC-CCCcceeee-----Eecc-hHHHHHHHHhcCce--eEEEEeeC
Q 016507 346 RYMDKEL-ELDKFVTHE-----MKFE-EINSAFDLLIKGKC--LRCVIWMG 387 (388)
Q Consensus 346 ~~~~~~~-~~~~~i~~~-----~~l~-~~~~A~~~~~~~~~--~kvvv~~~ 387 (388)
++.+|++ ++...++|. ++|+ |+.++++.+.++.. .|+++.++
T Consensus 327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 9999998 899999999 8999 99999999987654 37777653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.38 E-value=5.8e-12 Score=122.88 Aligned_cols=156 Identities=19% Similarity=0.218 Sum_probs=115.9
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE-EcCCCCC----------CccHHHHHHh
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG----------DKSVSQIIID 267 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~----------~~~~~~~i~~ 267 (388)
..++++|+|+|+|++|+++++.|+.+|+ +|++++.++++++.++++|++.+ +|..+.+ ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4579999999999999999999999999 89999999999999999999854 6553310 0123333333
Q ss_pred h-cC--CCccEEEEccCCH-----HH-HHHHHHHhhcCCceEEEEccCCCCC-ccccCHHHHHh-cCcEEEEeeecCCCc
Q 016507 268 M-TD--GGADYCFECVGLA-----SL-VQEAYACCRKGWGKTIVLGVDQPGS-QLSLSSFEVLH-SGKILMGSLFGGLKA 336 (388)
Q Consensus 268 ~-~~--g~~dvvid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~~i~g~~~~~~~~ 336 (388)
. .+ +++|+||+|++.+ .. .+++++.++++ |.++.+|...++. ..+.+...++. +++++.|.+. +.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 3 33 2799999999963 24 48999999998 9999999743221 34555555665 7999998752 22
Q ss_pred cCcHHHHHHHHhCCCCCCCccee
Q 016507 337 KSDIPILLKRYMDKELELDKFVT 359 (388)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~i~ 359 (388)
.+....+.+++.++.+++.++++
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23344689999999887776665
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.28 E-value=1.7e-12 Score=104.76 Aligned_cols=120 Identities=21% Similarity=0.325 Sum_probs=77.8
Q ss_pred cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccC--CHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhc
Q 016507 245 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 322 (388)
Q Consensus 245 lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 322 (388)
|||++++|+++ +++ ...++||+|||++| +...+..+++++ ++ |+++.++. .+.......+
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 69999999987 555 22349999999999 655346777788 97 99999974 1111222122
Q ss_pred CcEEEEeeecCCC----ccCcHHHHHHHHhCCCCCCCcceeeeEecchHHHHHHHHhcCce-eEEEE
Q 016507 323 GKILMGSLFGGLK----AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 384 (388)
Q Consensus 323 ~~~i~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvv 384 (388)
...+....+.... ..+.++++.+++++|++.+ .+.++|||+++.+|++.+++++. +|+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKP--PIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEE--eeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 3333333322101 2345999999999996655 48899999999999999999876 59986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.55 E-value=5.1e-07 Score=82.74 Aligned_cols=163 Identities=20% Similarity=0.286 Sum_probs=100.3
Q ss_pred hcCCCCCCEEEEEccchhHHHHHHHHHHcCCc-EEEEEcCCchHHHHHHHc----CCcEEEcCCCCCCccHHHHHHhhcC
Q 016507 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 196 ~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~ 270 (388)
.+.++++++||.+|.|. |..++++++..+.. +|++++.+++..+.+++. +.+.+-. .. .++. .+ .+..
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~-~~---~d~~-~l-~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEF-RL---GEIE-AL-PVAD 144 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEE-EE---cchh-hC-CCCC
Confidence 35688999999999887 88888888887753 799999999998888763 3322211 01 1121 11 1223
Q ss_pred CCccEEEEcc------CCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEEeeecCCCccCcHHHHH
Q 016507 271 GGADYCFECV------GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILL 344 (388)
Q Consensus 271 g~~dvvid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 344 (388)
+.||+|+... .....+..+.+.|+++ |+++..+..... . ++ ..+.+...+.+...... ....++.
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~--~~--~~~~~~~~~~~~~~~~~---~~~~e~~ 215 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-E--LP--EEIRNDAELYAGCVAGA---LQEEEYL 215 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-C--CC--HHHHHhHHHHhccccCC---CCHHHHH
Confidence 3799998543 2234589999999998 999987654321 1 22 11122222222211111 2455666
Q ss_pred HHHhC-CCCCCCcceeeeEecchHHHHHHHH
Q 016507 345 KRYMD-KELELDKFVTHEMKFEEINSAFDLL 374 (388)
Q Consensus 345 ~~~~~-~~~~~~~~i~~~~~l~~~~~A~~~~ 374 (388)
+++++ |-........+.++++++.++++.+
T Consensus 216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 216 AMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 66665 4333333345668899999999988
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.48 E-value=1.1e-06 Score=85.93 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=81.4
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE-EcCCCC----------CCccHHHHHHhh
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNC----------GDKSVSQIIIDM 268 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~----------~~~~~~~~i~~~ 268 (388)
.++++|+|+|+|.+|++++++++.+|+ +|++++.++++++.++++|++.+ ++..+. ..+++.+..++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 357999999999999999999999999 79999999999999999998763 332110 012333333443
Q ss_pred cC---CCccEEEEcc---CCHH---HHHHHHHHhhcCCceEEEEccCCCC
Q 016507 269 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPG 309 (388)
Q Consensus 269 ~~---g~~dvvid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 309 (388)
.. .++|+||+|+ |.+. ..++.++.++++ +.+++++...++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 33 2799999999 5432 467889999998 999999875433
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.40 E-value=1.2e-08 Score=98.77 Aligned_cols=163 Identities=17% Similarity=0.189 Sum_probs=105.1
Q ss_pred ccccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeccccc
Q 016507 73 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVS 152 (388)
Q Consensus 73 v~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 152 (388)
.-|.|+++.+.+|+++.++ +|++.+.. ||+|..| ++.|..... .|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 3589999999999999887 55555556 8999988 555554443 3333344
Q ss_pred ccceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEE
Q 016507 153 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV 232 (388)
Q Consensus 153 ~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~ 232 (388)
.|++++.++. .+.. ...++. . .+++. ..|...+.+..+..++++|+|+|+|.+|..+++.++..|+.+|+++
T Consensus 139 --lf~~a~~~~k-~vr~-~t~i~~-~--~vSv~-~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~ 210 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRT-ETDISA-G--AVSIS-SAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIA 210 (417)
T ss_pred --HHHHHHHHhh-hhhh-hcCCCC-C--CcCHH-HHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEE
Confidence 8999988765 2221 011110 0 11111 1111112233445678999999999999999999999996699999
Q ss_pred cCCchHHH-HHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 016507 233 DVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 284 (388)
Q Consensus 233 ~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~ 284 (388)
.++.++.+ +++.+|.. .++. .++.+.+ .++|+||+|++.+.
T Consensus 211 ~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 211 NRTYERAEDLAKELGGE-AVKF-----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred eCCHHHHHHHHHHcCCe-EeeH-----HHHHHHH-----hhCCEEEECCCCCC
Confidence 99888754 66677764 2221 1222222 17999999998764
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.33 E-value=1.4e-05 Score=76.74 Aligned_cols=103 Identities=21% Similarity=0.233 Sum_probs=78.2
Q ss_pred hHHHHHHhcCCC-CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHh
Q 016507 189 GVGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIID 267 (388)
Q Consensus 189 a~~~l~~~~~~~-~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~ 267 (388)
+|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|++ +. .+.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal-- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA-- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH--
Confidence 344444443544 89999999999999999999999999 899999988887666666654 22 122222
Q ss_pred hcCCCccEEEEccCCHHHHH-HHHHHhhcCCceEEEEccCC
Q 016507 268 MTDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 268 ~~~g~~dvvid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 307 (388)
.++|+||+++|....+. ..+..++++ +.++..|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 17899999999887665 688889997 8888888643
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.26 E-value=1.9e-05 Score=72.99 Aligned_cols=111 Identities=19% Similarity=0.272 Sum_probs=82.4
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.+.+|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++.+|+..+ .. .++.+.+ .++|+||+|+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l-----~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV-----GKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh-----CCCCEEEECC
Confidence 68999999999999999999999999 99999999888888888887533 11 1222222 1799999999
Q ss_pred CCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHhcCcEEEE
Q 016507 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 328 (388)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 328 (388)
+........++.++++ +.++.++..+++.+ +. ..-.++++..+
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pggtd--~~--~a~~~Gv~~~~ 261 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGGTD--FE--YAEKRGIKALL 261 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCCcC--ee--ehhhCCeEEEE
Confidence 8765456778889997 99999987654432 22 22334555553
No 137
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.14 E-value=7.4e-08 Score=93.68 Aligned_cols=159 Identities=19% Similarity=0.181 Sum_probs=96.9
Q ss_pred cccceeEEEEEecCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceecccccc
Q 016507 74 LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSV 153 (388)
Q Consensus 74 ~G~e~~G~Vv~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~ 153 (388)
-|||+++-+.+|+++.++.-+|+-=+ |+.|. ..++.|..... .|...+
T Consensus 92 ~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk----~a~~~a~~~g~---~g~~l~------------------- 139 (423)
T PRK00045 92 EGEEAVRHLFRVASGLDSMVLGEPQI------LGQVK----DAYALAQEAGT---VGTILN------------------- 139 (423)
T ss_pred CCHHHHHHHHHHHhhhhhhhcCChHH------HHHHH----HHHHHHHHcCC---chHHHH-------------------
Confidence 59999999999999998866666432 34433 11222222221 121122
Q ss_pred cceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhc---CCCCCCEEEEEccchhHHHHHHHHHHcCCcEEE
Q 016507 154 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA---NVEVGSTVVIFGLGSIGLAVAEGARLCGATRII 230 (388)
Q Consensus 154 g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi 230 (388)
+.|++.+.++ +.+..+.+..- .+.++++.++.... .-.++.+|+|+|+|.+|.++++.++..|+.+|+
T Consensus 140 ~lf~~a~~~~--------k~v~~~t~i~~-~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~ 210 (423)
T PRK00045 140 RLFQKAFSVA--------KRVRTETGIGA-GAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT 210 (423)
T ss_pred HHHHHHHHHH--------hhHhhhcCCCC-CCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence 2666655443 33332222221 13444454432221 235789999999999999999999999987899
Q ss_pred EEcCCchHHH-HHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 016507 231 GVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 284 (388)
Q Consensus 231 ~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~ 284 (388)
++.++.++.+ +++.+|.+ +++. .++.+.+ .++|+||+|++.+.
T Consensus 211 v~~r~~~ra~~la~~~g~~-~~~~-----~~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 211 VANRTLERAEELAEEFGGE-AIPL-----DELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEeCCHHHHHHHHHHcCCc-EeeH-----HHHHHHh-----ccCCEEEECCCCCC
Confidence 9999888755 66777754 3322 1122222 27899999999764
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.13 E-value=4.4e-05 Score=72.97 Aligned_cols=101 Identities=23% Similarity=0.285 Sum_probs=77.4
Q ss_pred HHHHHHhcC-CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhh
Q 016507 190 VGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 190 ~~~l~~~~~-~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~ 268 (388)
+.++.+..+ ...|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+. +.+ +.+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal--- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA--- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH---
Confidence 344444434 3689999999999999999999999999 899999888877666667763 221 22222
Q ss_pred cCCCccEEEEccCCHHHHH-HHHHHhhcCCceEEEEccC
Q 016507 269 TDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 269 ~~g~~dvvid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 306 (388)
.+.|++|++.|....+. ..+..++++ +.++.+|..
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 26799999999988666 488889997 888888864
No 139
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.07 E-value=1.1e-05 Score=75.39 Aligned_cols=108 Identities=21% Similarity=0.256 Sum_probs=79.2
Q ss_pred CceEEcCCCCCccccccccchhhhhHHHHHHhcCC----CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHH-
Q 016507 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF- 239 (388)
Q Consensus 165 ~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~- 239 (388)
...+++|+.+..+.++... +..+++.++ +.+.. .++.+|+|+|+|.+|..+++.++..|+.+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 3566778999888887766 566666654 33332 4789999999999999999999988877899999988765
Q ss_pred HHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHH
Q 016507 240 EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 285 (388)
Q Consensus 240 ~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~ 285 (388)
++++++|+. +++. .++.+.+. .+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~-----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPL-----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeH-----HHHHHHHh-----cCCEEEECCCCCch
Confidence 677778874 3322 12333221 68999999998864
No 140
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.98 E-value=0.00013 Score=66.94 Aligned_cols=138 Identities=9% Similarity=0.066 Sum_probs=86.3
Q ss_pred ceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcC---CCCCCEEEEEcc-chhHHHHHHHHH-HcCCcEE
Q 016507 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI 229 (388)
Q Consensus 155 ~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~~~~VlI~Ga-g~vG~~ai~la~-~~g~~~V 229 (388)
.|-+|.++..+....- .....++..-| -+.|+|. +.+... .-..+.|||.+| +-+++.++..++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 5666776665443311 11122222233 5566664 433322 223467777776 888888888877 4454499
Q ss_pred EEEcCCchHHHHHHHcCC-cEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 230 IGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 230 i~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
+++. |....++.+++|. +.|+.+++ +..+.....-+++|+.|.......+...+...--..+.+|..
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~t 233 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGAT 233 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEcc
Confidence 9996 5666679999997 77887765 333333467799999999987788888877742335566654
No 141
>PLN02494 adenosylhomocysteinase
Probab=97.97 E-value=7.7e-05 Score=72.04 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=79.2
Q ss_pred HHHHHHhcCC-CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhh
Q 016507 190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 190 ~~~l~~~~~~-~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~ 268 (388)
+.++.+..++ -.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+..+ .+.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv---------~leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL---------TLEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec---------cHHHHHh--
Confidence 4445555454 679999999999999999999999999 89999998887666666776522 1222222
Q ss_pred cCCCccEEEEccCCHHH-HHHHHHHhhcCCceEEEEccC
Q 016507 269 TDGGADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 269 ~~g~~dvvid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 306 (388)
..|+++++.|.... ....+..++++ +.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 67999999998764 37899999997 999999874
No 142
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.96 E-value=0.00016 Score=65.37 Aligned_cols=129 Identities=22% Similarity=0.266 Sum_probs=83.8
Q ss_pred ceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcC
Q 016507 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234 (388)
Q Consensus 155 ~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 234 (388)
+|.+|.. +...++.+++++++..+. .+.+.. .+..+. ..+.++++||-+|.|. |..++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 5666644 667788999988887654 221211 111121 1256889999999887 887776555 57757999999
Q ss_pred CchHHHHHHHc----CCcEEEcCCCCCCccHHHHHHhhcCC--CccEEEEccCCH---HHHHHHHHHhhcCCceEEEEcc
Q 016507 235 ISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 235 ~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~g--~~dvvid~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
++...+.+++. +....+. ...+ .||+|+...... ..+..+.+.|+++ |.++..|.
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~---------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi 214 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVY---------------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGI 214 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEE---------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEEC
Confidence 99888777653 2210010 1112 599998766543 2356788889997 99998875
Q ss_pred C
Q 016507 306 D 306 (388)
Q Consensus 306 ~ 306 (388)
.
T Consensus 215 ~ 215 (250)
T PRK00517 215 L 215 (250)
T ss_pred c
Confidence 3
No 143
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.82 E-value=0.0004 Score=63.87 Aligned_cols=96 Identities=20% Similarity=0.280 Sum_probs=71.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.|.+|+|+|.|.+|.+++..++.+|+ +|+++++++++.+.+..+|...+ .. .++.+.+ .++|+||+++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~l~~~l-----~~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NKLEEKV-----AEIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HHHHHHh-----ccCCEEEECC
Confidence 57899999999999999999999999 99999999888777766665422 11 1222222 2799999999
Q ss_pred CCHHHHHHHHHHhhcCCceEEEEccCCCC
Q 016507 281 GLASLVQEAYACCRKGWGKTIVLGVDQPG 309 (388)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 309 (388)
+....-...++.++++ ..++.++..+..
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~Pg~ 245 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKPGG 245 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence 7664335677788886 888889875433
No 144
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=0.00011 Score=63.15 Aligned_cols=121 Identities=20% Similarity=0.262 Sum_probs=86.7
Q ss_pred CCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHH----HHHcC
Q 016507 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFG 246 (388)
Q Consensus 171 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~lg 246 (388)
+..++....-.++-+...|. +.+...++++++||-+|.|+ |..++-+++..+ +|+.+++.++-.+. ++.+|
T Consensus 44 d~~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg 118 (209)
T COG2518 44 DRALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLG 118 (209)
T ss_pred CCcccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcC
Confidence 44455556666665656665 56788999999999999876 999999999888 89999998874444 45578
Q ss_pred CcEEE-cCCCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEcc
Q 016507 247 VTEFV-NSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 247 a~~v~-~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
...|. ...+ ... .+... +||.|+-+.+.+..-+..++.|+++ |+++.--.
T Consensus 119 ~~nV~v~~gD-G~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 119 YENVTVRHGD-GSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred CCceEEEECC-ccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 74432 2222 111 22333 8999998888877568899999998 99876543
No 145
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.74 E-value=0.00025 Score=67.76 Aligned_cols=98 Identities=20% Similarity=0.227 Sum_probs=69.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+ ...+.+.+ .++|+||+|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l-----~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV-----KRADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH-----ccCCEEEEc
Confidence 34569999999999999999999999 89999998888776654 45432222221 12232222 278999999
Q ss_pred cC---C--HH-HHHHHHHHhhcCCceEEEEccCC
Q 016507 280 VG---L--AS-LVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 280 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
++ . +. .....++.++++ +.++.++...
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~ 270 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQ 270 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCC
Confidence 83 2 21 136778889997 9999988643
No 146
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.68 E-value=0.00045 Score=67.00 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=75.3
Q ss_pred HHHHHhcC-CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhc
Q 016507 191 GAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 191 ~~l~~~~~-~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~ 269 (388)
..+.+..+ .-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+ .+.+.++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell~--- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVVE--- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHHh---
Confidence 33444433 3478999999999999999999999999 89999888777654555565421 2333221
Q ss_pred CCCccEEEEccCCHHHHH-HHHHHhhcCCceEEEEccC
Q 016507 270 DGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 270 ~g~~dvvid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 306 (388)
..|+|+.+.|....+. ..+..++++ +.++.+|..
T Consensus 309 --~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 309 --TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred --cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 6899999999877554 899999997 999999874
No 147
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.64 E-value=5.1e-05 Score=76.92 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=59.6
Q ss_pred CCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCC---------------------chHHHHHHHcCCcEEEcCCCC
Q 016507 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 198 ~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~---------------------~~~~~~~~~lga~~v~~~~~~ 256 (388)
..++|++|+|+|+|++|+++++.++..|+ +|++++.. +.+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 79988743 345677888999877764320
Q ss_pred CCccH-HHHHHhhcCCCccEEEEccCCHH
Q 016507 257 GDKSV-SQIIIDMTDGGADYCFECVGLAS 284 (388)
Q Consensus 257 ~~~~~-~~~i~~~~~g~~dvvid~~g~~~ 284 (388)
.++ .+.+ ..+||+||+++|...
T Consensus 212 --~~~~~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 --EDITLEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred --CcCCHHHH----HhhCCEEEEeeCCCC
Confidence 111 1222 127999999999764
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=97.63 E-value=0.00049 Score=71.42 Aligned_cols=137 Identities=19% Similarity=0.254 Sum_probs=86.6
Q ss_pred ceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEc
Q 016507 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (388)
Q Consensus 155 ~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~ 233 (388)
++++|..+++..++.+ +.++.+++..... ......+|++|||+|+ |.+|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 6677877877777766 5666666642110 0122346789999986 9999999999999999 899999
Q ss_pred CCchHHHHHHH-cCC-----cEEEcCCCCCCccHHHHHHhhc--CCCccEEEEccCC-----------------------
Q 016507 234 VISEKFEIGKR-FGV-----TEFVNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL----------------------- 282 (388)
Q Consensus 234 ~~~~~~~~~~~-lga-----~~v~~~~~~~~~~~~~~i~~~~--~g~~dvvid~~g~----------------------- 282 (388)
+++++.+.+.. ++. ....|-.+ ...+.+.+.+.. .|++|++|++.|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 98877655433 432 11234333 122333333221 2479999999982
Q ss_pred --HHHHHHHHHHhhc---CCceEEEEccC
Q 016507 283 --ASLVQEAYACCRK---GWGKTIVLGVD 306 (388)
Q Consensus 283 --~~~~~~~~~~l~~---~~G~~v~~g~~ 306 (388)
...++.+++.++. + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1223444556655 5 789988864
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.53 E-value=0.0004 Score=56.38 Aligned_cols=76 Identities=24% Similarity=0.260 Sum_probs=55.3
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcCCc--EEEcCCCCCCccHHHHHHhhcCCCccE
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~--~v~~~~~~~~~~~~~~i~~~~~g~~dv 275 (388)
--.+.++||+|+|.+|.+++..+...|+++|+++.|+.+|.+.+. .++.. .++..++ +.+.+. .+|+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Di 78 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADI 78 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESE
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCe
Confidence 346889999999999999999999999988999999988876554 45332 2333332 222221 7999
Q ss_pred EEEccCCHH
Q 016507 276 CFECVGLAS 284 (388)
Q Consensus 276 vid~~g~~~ 284 (388)
||.|++...
T Consensus 79 vI~aT~~~~ 87 (135)
T PF01488_consen 79 VINATPSGM 87 (135)
T ss_dssp EEE-SSTTS
T ss_pred EEEecCCCC
Confidence 999998764
No 150
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.34 E-value=0.0017 Score=59.96 Aligned_cols=96 Identities=20% Similarity=0.274 Sum_probs=63.8
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc----CCcE-EEcCCCCCCccHHHHHHhhcCCCc
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~-v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
..++++||-+|.|. |..++.+++ .|+.+|++++.++...+.+++. +... +..... + ......++|
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 55789999999877 877777666 4666999999999877766652 2221 111111 1 111223489
Q ss_pred cEEEEccCCH---HHHHHHHHHhhcCCceEEEEcc
Q 016507 274 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 274 dvvid~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
|+|+...... ..+..+.+.|+++ |.++..|.
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi 260 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGI 260 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence 9998765443 3356778999997 99988775
No 151
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.23 E-value=0.0018 Score=56.94 Aligned_cols=79 Identities=22% Similarity=0.289 Sum_probs=59.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcCC----cEEEcCCCCCCccHHHHHHhhcCC--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV----TEFVNSKNCGDKSVSQIIIDMTDG--G 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga----~~v~~~~~~~~~~~~~~i~~~~~g--~ 272 (388)
.++.++|+|| +++|.+.++.+...|+ +|+.+.|..++++.+. +++. ...+|-.+ .+.+.+.+..+... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 3467899998 9999999999999999 9999999999887655 4772 23455554 23444445544444 7
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+.++..|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999998885
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.19 E-value=0.0058 Score=54.42 Aligned_cols=102 Identities=22% Similarity=0.222 Sum_probs=66.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHc---CCcEEE--cCCCCCCccHHHHHHhhc--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFV--NSKNCGDKSVSQIIIDMT--DG 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l---ga~~v~--~~~~~~~~~~~~~i~~~~--~g 271 (388)
.+++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +.+ +.-+.+ |..+ ...+.+.+.+.. -+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4679999987 9999999999999999 999999988776554 222 222222 2222 122333232221 13
Q ss_pred CccEEEEccCCH-----------------------HHHHHHHHHhhcCCceEEEEccC
Q 016507 272 GADYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 272 ~~dvvid~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
++|.++.+.+.. ..++..+.++..+ |+++.++..
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 689999988742 1134555666776 899988864
No 153
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.17 E-value=0.002 Score=54.83 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=56.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC---cEEEcCCCCCCccHHHHHHhhcCC---Cc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV---TEFVNSKNCGDKSVSQIIIDMTDG---GA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga---~~v~~~~~~~~~~~~~~i~~~~~g---~~ 273 (388)
.|.+|||+|+ +++|+..++-...+|- +||.+.+++++++.+++.-. ..+.|-.+ .+-..++.++... ..
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence 4789999975 9999999998888887 99999999999988876422 34555444 3322333333332 68
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
++++++.|.
T Consensus 80 NvliNNAGI 88 (245)
T COG3967 80 NVLINNAGI 88 (245)
T ss_pred heeeecccc
Confidence 999998884
No 154
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.02 E-value=0.0078 Score=56.20 Aligned_cols=103 Identities=21% Similarity=0.304 Sum_probs=72.1
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCC-cEEEEEcCCchHHHHHH----HcCCcEEEcCCCCCCccHHHHHHh
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIID 267 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~ 267 (388)
+.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+.... .+..+.+..
T Consensus 72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~ 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPE 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcccc
Confidence 3456678899999999997 49999999988763 26999999988766554 35665433222 122222211
Q ss_pred hcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEE
Q 016507 268 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 268 ~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
. +.||+|+.+.+........++.++++ |+++..
T Consensus 147 ~--~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 F--APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred c--CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 1 37999999888766566888999997 987763
No 155
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=96.99 E-value=0.01 Score=51.48 Aligned_cols=102 Identities=20% Similarity=0.407 Sum_probs=69.5
Q ss_pred HhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHH----HcC-CcEEEcCCCCCCccHHHHHHhh
Q 016507 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFG-VTEFVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~----~lg-a~~v~~~~~~~~~~~~~~i~~~ 268 (388)
....+.++++||.+|+|. |.+++.+++..+ ..+|++++.+++..+.++ .++ .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 456788999999999988 999999988764 238999999998877654 355 23222111 1222222222
Q ss_pred cCCCccEEEEccCC---HHHHHHHHHHhhcCCceEEEE
Q 016507 269 TDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 269 ~~g~~dvvid~~g~---~~~~~~~~~~l~~~~G~~v~~ 303 (388)
.+.||.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999985543 34477888899997 998753
No 156
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.99 E-value=0.014 Score=50.21 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=64.2
Q ss_pred hcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE-EcCCCCCCccHHHHHHhhcCC-Cc
Q 016507 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-GA 273 (388)
Q Consensus 196 ~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g-~~ 273 (388)
...++++++||.+|+|+-+++.....+..+..+|++++.++.+ ...++..+ .|..+ ....+.+.+...+ ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence 3457899999999988766544444444443489999998764 11233322 23332 3344455555545 89
Q ss_pred cEEEE-cc----CC------------HHHHHHHHHHhhcCCceEEEEc
Q 016507 274 DYCFE-CV----GL------------ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 274 dvvid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 304 (388)
|+|+. .. |. ...+..+.+.|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99995 22 21 23477889999998 9998764
No 157
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.97 E-value=0.0073 Score=58.02 Aligned_cols=113 Identities=18% Similarity=0.239 Sum_probs=75.9
Q ss_pred cccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCcc
Q 016507 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS 260 (388)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 260 (388)
++..+-...+..+.+..+++++++||-+|.| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .+
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D 221 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QD 221 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cc
Confidence 3443444455556677889999999999875 47777888888898 9999999999999887643211111111 12
Q ss_pred HHHHHHhhcCCCccEEEEc-----cCC---HHHHHHHHHHhhcCCceEEEEc
Q 016507 261 VSQIIIDMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 261 ~~~~i~~~~~g~~dvvid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 304 (388)
+. ++ .+.||.|+.. ++. ...+..+.+.|+++ |.++...
T Consensus 222 ~~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 222 YR----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred hh----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 21 11 2479998743 333 23478888999997 9988754
No 158
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.90 E-value=0.012 Score=55.97 Aligned_cols=96 Identities=17% Similarity=0.159 Sum_probs=69.8
Q ss_pred CEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcC---C-cEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---V-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 203 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg---a-~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
.+|||+|+|.+|..+++.+-..+-.+|++.+++.++.+.+.... . ...+|..+ .+.+.+.+ . ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li----~-~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALI----K-DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHH----h-cCCEEEE
Confidence 47999999999999999887777449999999999888876653 3 23566554 12233333 2 5699999
Q ss_pred ccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 279 CVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
|.+.......+-.|++.+ =.++.....
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 999887666666777775 667777654
No 159
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.88 E-value=0.0056 Score=52.21 Aligned_cols=90 Identities=30% Similarity=0.352 Sum_probs=62.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.+++....+.....+... .++.+.+. ..|+|+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLA-----QADIVSLH 98 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHH-----H-SEEEE-
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcc-----hhhhhhhh
Confidence 358999999999999999999999999 9999999887766444454421 23444433 47888887
Q ss_pred cCCHH-----HHHHHHHHhhcCCceEEEEcc
Q 016507 280 VGLAS-----LVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 280 ~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 305 (388)
.+... .-...+..++++ ..+|.++.
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccc
Confidence 76321 124677888886 77777653
No 160
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.82 E-value=0.008 Score=54.12 Aligned_cols=80 Identities=21% Similarity=0.288 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c----CCc-EEE--cCCCCCCccHHHHHH-hh
Q 016507 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFV--NSKNCGDKSVSQIII-DM 268 (388)
Q Consensus 199 ~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~--~~~~~~~~~~~~~i~-~~ 268 (388)
...+.++||+|| +++|...+..+...|+ +++.+.|+++|++.+.+ + |.. .++ |-.+ .+-.+.+. ++
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l 78 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDEL 78 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHH
Confidence 346789999998 9999999998889999 99999999998876553 3 222 133 3333 22233333 22
Q ss_pred cCC--CccEEEEccCC
Q 016507 269 TDG--GADYCFECVGL 282 (388)
Q Consensus 269 ~~g--~~dvvid~~g~ 282 (388)
... .+|+.+++.|.
T Consensus 79 ~~~~~~IdvLVNNAG~ 94 (265)
T COG0300 79 KERGGPIDVLVNNAGF 94 (265)
T ss_pred HhcCCcccEEEECCCc
Confidence 222 79999999984
No 161
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.81 E-value=0.021 Score=48.60 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=62.8
Q ss_pred EEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 016507 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (388)
Q Consensus 205 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~ 282 (388)
|+|+|+ |.+|..+++.+...|+ +|+++.+++++.+. ..+++.+. |..+ . +.+.+... ++|+||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d---~---~~~~~al~-~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD---P---DSVKAALK-GADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC---H---HHHHHHHT-TSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh---h---hhhhhhhh-hcchhhhhhhh
Confidence 789998 9999999999999998 99999999988776 44454332 2222 2 23333222 89999999984
Q ss_pred ----HHHHHHHHHHhhcC-CceEEEEccC
Q 016507 283 ----ASLVQEAYACCRKG-WGKTIVLGVD 306 (388)
Q Consensus 283 ----~~~~~~~~~~l~~~-~G~~v~~g~~ 306 (388)
.......++.++.. -.+++.++..
T Consensus 71 ~~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 71 PPKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp TTTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred hcccccccccccccccccccccceeeecc
Confidence 23255666666553 0367776654
No 162
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.80 E-value=0.02 Score=49.17 Aligned_cols=112 Identities=18% Similarity=0.152 Sum_probs=74.3
Q ss_pred CCCEEEEEc-c-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcCCc-EEEcCCCC-CCccHHHHHHhhcCCCccE
Q 016507 201 VGSTVVIFG-L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNC-GDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 201 ~~~~VlI~G-a-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~~-~~~~~~~~i~~~~~g~~dv 275 (388)
....|||+| + |+||.+.+.-....|+ .|+++.+.-+..+-+. +.|.. .-+|-.+. ....+..++++...|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 346799997 5 9999998888888899 9999999888776555 67752 23443331 0123555666667778999
Q ss_pred EEEccCCHH--------------------------HHHHHHHHhhcCCceEEEEccCCCCCcccc
Q 016507 276 CFECVGLAS--------------------------LVQEAYACCRKGWGKTIVLGVDQPGSQLSL 314 (388)
Q Consensus 276 vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 314 (388)
.++..|.+. .-.....+++.. |+|+.+|...+-.+.+|
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence 999776431 011223456666 99999987543333333
No 163
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0085 Score=54.91 Aligned_cols=78 Identities=18% Similarity=0.277 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE-EcCCCCCCccHHHHHHh---hcCCCccE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIID---MTDGGADY 275 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~---~~~g~~dv 275 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+...++..+ .|..+ .+.+.+.+.+ ...+.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 3568999997 9999999998888899 89999999888877766665433 34433 1223222322 23347999
Q ss_pred EEEccC
Q 016507 276 CFECVG 281 (388)
Q Consensus 276 vid~~g 281 (388)
++++.|
T Consensus 80 li~~Ag 85 (277)
T PRK05993 80 LFNNGA 85 (277)
T ss_pred EEECCC
Confidence 999876
No 164
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.0074 Score=55.12 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=54.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE-EcCCCCCCccHHHHHHhhcC--CCccEEEE
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCFE 278 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--g~~dvvid 278 (388)
.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ .+.+.+.+.+... +++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 37899987 9999999998888899 89999988877776665555433 34443 1333333333322 37999999
Q ss_pred ccCC
Q 016507 279 CVGL 282 (388)
Q Consensus 279 ~~g~ 282 (388)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 165
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.73 E-value=0.023 Score=47.98 Aligned_cols=104 Identities=20% Similarity=0.307 Sum_probs=70.4
Q ss_pred HhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcEEEcCCCCCCccHHHHHHhhcC
Q 016507 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~ 270 (388)
...++++|+.++=+|+|. |..+++++...-..+|++++++++..+..+ +||.+.+..-.. +-.+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-
Confidence 456789999777778755 666778885544459999999998877665 578764322221 1223333221
Q ss_pred CCccEEEEccCC--HHHHHHHHHHhhcCCceEEEEccC
Q 016507 271 GGADYCFECVGL--ASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 271 g~~dvvid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.+|.+|---|. +..++.++..|+++ |++|.-...
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 69999865443 24478999999998 999977653
No 166
>PRK12742 oxidoreductase; Provisional
Probab=96.72 E-value=0.035 Score=49.29 Aligned_cols=101 Identities=23% Similarity=0.296 Sum_probs=62.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcC-CchHHHH-HHHcCCcEE-EcCCCCCCccHHHHHHhhcCCCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI-GKRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~-~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~~dvv 276 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+.+.+ ++++.+. ..++++..+ .|..+ ...+.+.+.+. +++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRKS--GALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHHh--CCCcEE
Confidence 4679999987 9999999999988999 7777644 4444433 344555433 23322 12233333222 379999
Q ss_pred EEccCCHH-------------------------HHHHHHHHhhcCCceEEEEccCC
Q 016507 277 FECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 277 id~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
|++.|... ....++..+... |+++.++...
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 99987420 012344455665 8999887643
No 167
>PRK14967 putative methyltransferase; Provisional
Probab=96.70 E-value=0.092 Score=46.46 Aligned_cols=99 Identities=19% Similarity=0.186 Sum_probs=63.7
Q ss_pred HhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcEEEcCCCCCCccHHHHHHhhcC
Q 016507 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~ 270 (388)
....+.++++||-.|.|. |..++.+++. +..+|++++.+++..+.++. .+....+.. .++.+.+ ..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~-----~d~~~~~---~~ 99 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR-----GDWARAV---EF 99 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE-----Cchhhhc---cC
Confidence 345678889999999877 8888888875 55599999999987776554 343322221 1222221 12
Q ss_pred CCccEEEEccCC---------------------------HHHHHHHHHHhhcCCceEEEEc
Q 016507 271 GGADYCFECVGL---------------------------ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 271 g~~dvvid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g 304 (388)
+.||+|+...+. ...+..+.+.|+++ |+++.+-
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 389999874210 11245677888887 8887653
No 168
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.68 E-value=0.031 Score=51.16 Aligned_cols=139 Identities=22% Similarity=0.291 Sum_probs=79.6
Q ss_pred ceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcC
Q 016507 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234 (388)
Q Consensus 155 ~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 234 (388)
+|.+|..-..+..++|...+-+- ......|++..=.....++++.+||=+|.|+ |.+++..+| +|+.+|+++|.
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~Di 193 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDI 193 (300)
T ss_pred CCccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecC
Confidence 45444322235566666665442 3334445544211123366899999888755 666665555 47779999999
Q ss_pred CchHHHHH----HHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCH---HHHHHHHHHhhcCCceEEEEccC
Q 016507 235 ISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 235 ~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
++.-.+-+ +..++.... ... ... ......++.||+|+-.+=.. .........++++ |++++.|..
T Consensus 194 Dp~AV~aa~eNa~~N~v~~~~-~~~---~~~--~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 194 DPQAVEAARENARLNGVELLV-QAK---GFL--LLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred CHHHHHHHHHHHHHcCCchhh-hcc---ccc--chhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 88544433 334554211 110 000 11112224899998876443 2246778889997 999999864
No 169
>PRK04148 hypothetical protein; Provisional
Probab=96.65 E-value=0.034 Score=44.59 Aligned_cols=86 Identities=20% Similarity=0.262 Sum_probs=59.9
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
..++.+|+++|.| .|...++.+...|. .|+++|.++...+.++..+.+.+.+.-- ..++ .+. +++|++..
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y----~~a~liys 83 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY----KNAKLIYS 83 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH----hcCCEEEE
Confidence 3456789999998 78755555557798 9999999999999999888766554211 1222 111 28999999
Q ss_pred ccCCHHHHHHHHHHhhc
Q 016507 279 CVGLASLVQEAYACCRK 295 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l~~ 295 (388)
+-..++ ++..+..++.
T Consensus 84 irpp~e-l~~~~~~la~ 99 (134)
T PRK04148 84 IRPPRD-LQPFILELAK 99 (134)
T ss_pred eCCCHH-HHHHHHHHHH
Confidence 999888 5444444443
No 170
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.61 E-value=0.019 Score=50.15 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=66.8
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHH----cCCc---EEEcCCCCCCccHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI 264 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~ 264 (388)
+.+...++++++||-+|.|. |..++.+++..+ ..+|++++.+++-.+.+++ ++.. .++..+- .+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence 45667788999999998765 777777777664 2289999999876665543 4432 2232211 111
Q ss_pred HHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEE
Q 016507 265 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 265 i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
+. ..+.||+|+-+..........++.|+++ |+++..
T Consensus 137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 11 1238999987766555467888999998 998754
No 171
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.61 E-value=0.0045 Score=54.06 Aligned_cols=113 Identities=19% Similarity=0.250 Sum_probs=70.3
Q ss_pred ccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCc-EEEEEcCCchHHHHHH----HcCCcEE-EcC
Q 016507 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK----RFGVTEF-VNS 253 (388)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~----~lga~~v-~~~ 253 (388)
..++.+...|. +.+.+.+++|++||-+|+|. |..++.+++..|.. +|+.++..++-.+.++ .++.+.| +..
T Consensus 53 ~~is~P~~~a~--~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~ 129 (209)
T PF01135_consen 53 QTISAPSMVAR--MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVV 129 (209)
T ss_dssp EEE--HHHHHH--HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEE
T ss_pred eechHHHHHHH--HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEE
Confidence 33443434443 56778899999999999865 88888888877642 6999998887555444 4565432 222
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEE
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
.+ . ..-+. ..++||.|+-+.+.+..-...++.|+++ |+++.-
T Consensus 130 gd---g--~~g~~--~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 130 GD---G--SEGWP--EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp S----G--GGTTG--GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cc---h--hhccc--cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 22 1 11111 1128999998888776567899999998 999874
No 172
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.60 E-value=0.01 Score=59.17 Aligned_cols=73 Identities=22% Similarity=0.230 Sum_probs=55.0
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
+.++++|+|+|.|.+|++++++++..|+ +|++++..+.+.+.++++|+..+. ... ..+.+. .+|+|+.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~-----~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSD-----AVQQIA-----DYALVVT 76 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccc-----hHhHhh-----cCCEEEE
Confidence 5578999999999999999999999999 999999776666667777875432 111 112221 5799999
Q ss_pred ccCCH
Q 016507 279 CVGLA 283 (388)
Q Consensus 279 ~~g~~ 283 (388)
+.|.+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 88865
No 173
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.014 Score=51.64 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=51.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE--EcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF--VNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+.++.++-... .|-.+ .+.+.+.+..+..+++|++|.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence 46899987 9999998888888899 99999988876655554432222 23333 1223333333333379999998
Q ss_pred cCC
Q 016507 280 VGL 282 (388)
Q Consensus 280 ~g~ 282 (388)
.|.
T Consensus 79 ag~ 81 (225)
T PRK08177 79 AGI 81 (225)
T ss_pred Ccc
Confidence 764
No 174
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.57 E-value=0.0077 Score=52.92 Aligned_cols=101 Identities=17% Similarity=0.255 Sum_probs=67.8
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCC-cEEEEEcCCchHHHHHHH----cCCcE--EEcCCCCCCccHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 265 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i 265 (388)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ +|... ++..+. .+..
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~~~~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------TLGY 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------ccCC
Confidence 45677889999999998765 6677777777653 289999999887766654 34432 222111 0000
Q ss_pred HhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEE
Q 016507 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 266 ~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
...+.||+|+-...........++.|+++ |+++..
T Consensus 141 --~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred --CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01138999976555555467889999998 998765
No 175
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.56 E-value=0.0091 Score=46.30 Aligned_cols=93 Identities=22% Similarity=0.291 Sum_probs=61.4
Q ss_pred CCCEEEEEccchhHHHHHHHHH-HcCCcEEEEEcCCchHHHHHHHcC----C-cEE-EcCCCCCCccHHHHHHhhcCCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRFG----V-TEF-VNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~lg----a-~~v-~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
|+.+||-+|.|. |..++.+++ ..++ +|++++.+++..+.+++.- . +.+ +-..+ + . ......++|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d-----~-~-~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD-----A-E-FDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC-----C-H-GGTTTSSCE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc-----c-c-cCcccCCCC
Confidence 678999998866 777778887 4677 8999999999888776532 1 211 22222 2 1 111112279
Q ss_pred cEEEEcc-CC---H------HHHHHHHHHhhcCCceEEEE
Q 016507 274 DYCFECV-GL---A------SLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 274 dvvid~~-g~---~------~~~~~~~~~l~~~~G~~v~~ 303 (388)
|+|+... .. . ..++.+.+.|+++ |+++.-
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 9999876 21 1 2267888999997 888753
No 176
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.55 E-value=0.048 Score=45.20 Aligned_cols=109 Identities=18% Similarity=0.251 Sum_probs=66.3
Q ss_pred HHHhcC-CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC
Q 016507 193 AWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 271 (388)
Q Consensus 193 l~~~~~-~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g 271 (388)
+.+..+ .-.|.+++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. + ..+.+.+ .
T Consensus 13 i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v--------~~~~~a~-----~ 77 (162)
T PF00670_consen 13 IMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-V--------MTLEEAL-----R 77 (162)
T ss_dssp HHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-E--------E-HHHHT-----T
T ss_pred HHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-e--------cCHHHHH-----h
Confidence 334434 4578999999999999999999999999 999999988765555444553 2 1233322 2
Q ss_pred CccEEEEccCCHHH-HHHHHHHhhcCCceEEEEccCCCCCccccCHHHHHh
Q 016507 272 GADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH 321 (388)
Q Consensus 272 ~~dvvid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~ 321 (388)
..|++|.++|.... ..+.++.|+.+ ..+...|. .+..++...+-.
T Consensus 78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh----~d~Eid~~~L~~ 123 (162)
T PF00670_consen 78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGH----FDVEIDVDALEA 123 (162)
T ss_dssp T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSS----STTSBTHHHHHT
T ss_pred hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCc----CceeEeeccccc
Confidence 67999999998763 35788888885 55545554 334555555433
No 177
>PRK08017 oxidoreductase; Provisional
Probab=96.53 E-value=0.0093 Score=53.71 Aligned_cols=77 Identities=23% Similarity=0.321 Sum_probs=54.4
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEE-EcCCCCCCccHH---HHHHhhcCCCccEEE
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVS---QIIIDMTDGGADYCF 277 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~---~~i~~~~~g~~dvvi 277 (388)
++|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+++.++..+ .|..+ ...+. +.+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 47999998 9999999999988899 89999999888887777776543 33333 12222 223232334789999
Q ss_pred EccCC
Q 016507 278 ECVGL 282 (388)
Q Consensus 278 d~~g~ 282 (388)
.+.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 88763
No 178
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.52 E-value=0.026 Score=47.43 Aligned_cols=97 Identities=20% Similarity=0.227 Sum_probs=64.5
Q ss_pred cccccchhhhhHHHHHHhcCCCCCCEEEEEccch-hHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCC
Q 016507 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257 (388)
Q Consensus 179 aa~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 257 (388)
....||...++...+.+...--.+.+|||+|+|. +|..++..++..|+ +|+++.++.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~--------------------- 78 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT--------------------- 78 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------
Confidence 4556665555555343333345789999999986 59989999999999 788876542
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 258 ~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.++.+.+. .+|+||.+++.+..+.. +.++++ -.++.++..
T Consensus 79 -~~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 79 -KNLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred -hhHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 12222222 68999999998763332 246665 677778763
No 179
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.50 E-value=0.035 Score=55.52 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=65.8
Q ss_pred HhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c--------C------CcE-EEcCCCCC
Q 016507 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--------G------VTE-FVNSKNCG 257 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--------g------a~~-v~~~~~~~ 257 (388)
...+.+.|.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.. + | +.. ..|-.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 3455678899999997 9999999998888899 89999998877654321 1 2 111 123322
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHH---------------HHHHHHHHhhcC-CceEEEEccC
Q 016507 258 DKSVSQIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRKG-WGKTIVLGVD 306 (388)
Q Consensus 258 ~~~~~~~i~~~~~g~~dvvid~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~ 306 (388)
.+.+.+.. +++|+||.+.|... ....+++.+... .++||.++..
T Consensus 150 ----~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi 209 (576)
T PLN03209 150 ----PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL 209 (576)
T ss_pred ----HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence 12233322 37999999987531 123334444332 2689988764
No 180
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.043 Score=48.73 Aligned_cols=79 Identities=19% Similarity=0.264 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCC---cEEE--cCCCCCCccHHHHHHhhcC--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFV--NSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga---~~v~--~~~~~~~~~~~~~i~~~~~--g 271 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +.+.. -+.+ |-.+ ...+.+.+.+... +
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999988877899 899999887765443 33321 1122 3222 1333333333221 3
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|++|++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 79999998764
No 181
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.47 E-value=0.015 Score=52.79 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=70.0
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-CCc-EEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~-~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
..+|.|+|+|.+|.-++.+|..+|+ +|...+.+..|+..+..+ +-. +.+-+.. ..+.+.+. +.|++|.+
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v~-----~aDlvIga 238 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAVK-----KADLVIGA 238 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHhh-----hccEEEEE
Confidence 4578899999999999999999999 999999999998888764 333 2222222 34444443 68999887
Q ss_pred cCCH------HHHHHHHHHhhcCCceEEEEcc
Q 016507 280 VGLA------SLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 280 ~g~~------~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
+=.+ ...++.++.|+++ +.++.++.
T Consensus 239 VLIpgakaPkLvt~e~vk~MkpG-sVivDVAi 269 (371)
T COG0686 239 VLIPGAKAPKLVTREMVKQMKPG-SVIVDVAI 269 (371)
T ss_pred EEecCCCCceehhHHHHHhcCCC-cEEEEEEE
Confidence 6322 2367889999997 99988875
No 182
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.46 E-value=0.011 Score=49.47 Aligned_cols=92 Identities=15% Similarity=0.273 Sum_probs=61.5
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC--cEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
+|.|+|| |-+|...++=|+..|. .|+++.++++|....+..-+ .-++|.. .+++.+ .++|+||++.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~-----~~a~~l-----~g~DaVIsA~ 70 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT-----SLASDL-----AGHDAVISAF 70 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh-----hhHhhh-----cCCceEEEec
Confidence 5889998 9999999999999999 99999999998765432211 0123221 122222 2899999998
Q ss_pred CCH---------HHHHHHHHHhhc-CCceEEEEccC
Q 016507 281 GLA---------SLVQEAYACCRK-GWGKTIVLGVD 306 (388)
Q Consensus 281 g~~---------~~~~~~~~~l~~-~~G~~v~~g~~ 306 (388)
+.. ...+.++..++. +.-++..+|+.
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 754 113345666665 22578888864
No 183
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.44 E-value=0.018 Score=55.78 Aligned_cols=80 Identities=15% Similarity=0.120 Sum_probs=56.1
Q ss_pred hcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCCcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 016507 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 274 (388)
Q Consensus 196 ~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~d 274 (388)
...--.+.+|||+|+|.+|.+++..+...|+.+++++.++.++.+.+ ..++-..++. + +.+.+.. ..+|
T Consensus 175 ~~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~--------~-~~l~~~l-~~aD 244 (414)
T PRK13940 175 QLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY--------L-SELPQLI-KKAD 244 (414)
T ss_pred HhcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec--------H-HHHHHHh-ccCC
Confidence 33345678999999999999999999999987899999988775544 4454212222 1 1122211 2699
Q ss_pred EEEEccCCHHH
Q 016507 275 YCFECVGLASL 285 (388)
Q Consensus 275 vvid~~g~~~~ 285 (388)
+||.|++.+..
T Consensus 245 iVI~aT~a~~~ 255 (414)
T PRK13940 245 IIIAAVNVLEY 255 (414)
T ss_pred EEEECcCCCCe
Confidence 99999998753
No 184
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.43 E-value=0.052 Score=47.65 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=63.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc------hHH--HHHHHcCC----------------cEEEcCCCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS------EKF--EIGKRFGV----------------TEFVNSKNC 256 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~------~~~--~~~~~lga----------------~~v~~~~~~ 256 (388)
+...|+|+|.|++|.+++..+-..|+.++..+|-+. .|+ .++...|- .+|.-.++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 457899999999999999999999999988887554 111 11111221 11211121
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHH-HHhhcCCceEEEEccCC
Q 016507 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAY-ACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~-~~l~~~~G~~v~~g~~~ 307 (388)
--..+.+.++...+||+|+||+..-..-..++ .|.+.+ -.++..++..
T Consensus 108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 11234455555569999999998765333334 455554 5677666543
No 185
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.42 E-value=0.0086 Score=50.51 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=63.7
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEc-CCCCC-------------CccHHHHHHh
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN-SKNCG-------------DKSVSQIIID 267 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~-~~~~~-------------~~~~~~~i~~ 267 (388)
..+|+|+|+|.+|+.|+.+++.+|+ +|+..+...++.+.+..++...+.. ..+.. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4789999999999999999999999 8999999888888888777654322 11100 0112222222
Q ss_pred hcCCCccEEEEccC--C---HH-HHHHHHHHhhcCCceEEEEcc
Q 016507 268 MTDGGADYCFECVG--L---AS-LVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 268 ~~~g~~dvvid~~g--~---~~-~~~~~~~~l~~~~G~~v~~g~ 305 (388)
... .+|+||-+.- + +. ...+.++.|+++ ..++.+..
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~ 140 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISC 140 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEe
Confidence 211 5788885331 1 11 135777888886 77777764
No 186
>PRK06182 short chain dehydrogenase; Validated
Probab=96.41 E-value=0.016 Score=52.83 Aligned_cols=79 Identities=19% Similarity=0.258 Sum_probs=54.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhc--CCCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~~dvv 276 (388)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+...++.. ..|-.+ .+.+.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 3578999997 9999999998888899 9999999887776554445433 234333 133333333322 2379999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999874
No 187
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.019 Score=51.79 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=52.6
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c---CC-cEE--EcCCCCCCccHHHHHHhhc--
Q 016507 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F---GV-TEF--VNSKNCGDKSVSQIIIDMT-- 269 (388)
Q Consensus 200 ~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga-~~v--~~~~~~~~~~~~~~i~~~~-- 269 (388)
..+.+|||+|+ |.+|..++..+...|+ +|+++.+++++.+.+.. + +. .++ .|-.+ .+++.+.+.+..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence 35789999987 9999999999988999 89999988877654432 1 21 122 23322 123333333321
Q ss_pred CCCccEEEEccCC
Q 016507 270 DGGADYCFECVGL 282 (388)
Q Consensus 270 ~g~~dvvid~~g~ 282 (388)
.+++|++|++.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (258)
T PRK06949 84 AGTIDILVNNSGV 96 (258)
T ss_pred cCCCCEEEECCCC
Confidence 2378999999883
No 188
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.024 Score=50.62 Aligned_cols=77 Identities=19% Similarity=0.328 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEE-EcCCCCCCccHHHHHHhhcCCCccEEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCF 277 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v-~~~~~~~~~~~~~~i~~~~~g~~dvvi 277 (388)
.+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+...+ .|..+ ....+.+.+. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence 4679999997 9999999999998999 89999988876654433 444332 34333 2222222221 23799999
Q ss_pred EccCC
Q 016507 278 ECVGL 282 (388)
Q Consensus 278 d~~g~ 282 (388)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 189
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.055 Score=48.44 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=60.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch-HHHH----HHHcCCcE---EEcCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEI----GKRFGVTE---FVNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~----~~~lga~~---v~~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+. ++..+... ..|..+ .+++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4678999997 9999999998888899 8888877643 2222 22223221 123333 1223333332222
Q ss_pred -CCccEEEEccCCH-------------------HHHHHHHHHhhcCCceEEEEcc
Q 016507 271 -GGADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 271 -g~~dvvid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
+++|+++.+.+.. ..++.+.+.+..+ |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999887642 2234455555555 88888865
No 190
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.34 E-value=0.049 Score=41.79 Aligned_cols=93 Identities=20% Similarity=0.287 Sum_probs=59.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.|.+|||+|+|.+|..-++.+...|+ +|+++.... +..+ +.-... .+ .+.+. + .++++||-+.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~~-----~~~~~---l--~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-RR-----EFEED---L--DGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-ES-----S-GGG---C--TTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-hh-----hHHHH---H--hhheEEEecC
Confidence 57899999999999999999999999 899997764 2222 111121 11 22111 1 2799999999
Q ss_pred CCHHHHHHHHHHhhcCCceEEEEccCCCCCc
Q 016507 281 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQ 311 (388)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 311 (388)
+.+..-+...+..+.. |.++.....+...+
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~~~d 98 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDPELCD 98 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-CCCCS
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCcCCCe
Confidence 9888555666666665 89998876543333
No 191
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.017 Score=54.44 Aligned_cols=79 Identities=25% Similarity=0.336 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcEE---EcCCCCCCccHHHHHHhh--cC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF---VNSKNCGDKSVSQIIIDM--TD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v---~~~~~~~~~~~~~~i~~~--~~ 270 (388)
.+.+|||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|.+.. .|-.+ .+.+.+.+.+. ..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 5679999997 9999999999999999 899999988776533 23454432 23333 12222222221 12
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 479999999873
No 192
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.062 Score=50.73 Aligned_cols=79 Identities=19% Similarity=0.136 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcEE---EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF---VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v---~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. ..|.... .|..+ .+.+.+.+.+.. -
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999987 9999999998888999 8999998887655332 3344321 34333 122333222221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 379999999874
No 193
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.02 Score=51.71 Aligned_cols=84 Identities=23% Similarity=0.250 Sum_probs=54.2
Q ss_pred cCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCc--E--EEcCCCCCCccHHHHHHhhc-
Q 016507 197 ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT--E--FVNSKNCGDKSVSQIIIDMT- 269 (388)
Q Consensus 197 ~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~--~--v~~~~~~~~~~~~~~i~~~~- 269 (388)
....++.++||+|+ |.+|..+++.+...|+ +|++++++++..+.+.+ ..-. . ..|..+ ...+.+.+.+..
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 82 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVE 82 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHH
Confidence 34457789999997 9999999999988899 89999988766554433 2211 1 223333 122222222221
Q ss_pred -CCCccEEEEccCCH
Q 016507 270 -DGGADYCFECVGLA 283 (388)
Q Consensus 270 -~g~~dvvid~~g~~ 283 (388)
-+++|+||.+.|..
T Consensus 83 ~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 83 RFGGLDVLVNNAGIA 97 (264)
T ss_pred HhCCCCEEEECCCCC
Confidence 13799999988753
No 194
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.022 Score=51.40 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 275 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~~--g~~dv 275 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+++++++.+.+.+ ..++... ..|..+ ...+.+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999997 9999999999988899 899998887665433 3444322 234333 1222222222211 37899
Q ss_pred EEEccCC
Q 016507 276 CFECVGL 282 (388)
Q Consensus 276 vid~~g~ 282 (388)
++.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 195
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.26 E-value=0.085 Score=41.43 Aligned_cols=103 Identities=20% Similarity=0.304 Sum_probs=67.8
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE--EEcCCCCCCccHHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 266 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~ 266 (388)
+.....+.++++||-+|.|. |..+..+++..+..+|++++.++...+.+++ ++... ++..+- ... +.
T Consensus 11 ~~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~ 83 (124)
T TIGR02469 11 TLSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LE 83 (124)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Ch
Confidence 34455677888999999877 8888888887654499999999987776653 34332 222111 110 11
Q ss_pred hhcCCCccEEEEccCC---HHHHHHHHHHhhcCCceEEEEc
Q 016507 267 DMTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 267 ~~~~g~~dvvid~~g~---~~~~~~~~~~l~~~~G~~v~~g 304 (388)
...+.+|+|+...+. ...++.+.+.|+++ |.++...
T Consensus 84 -~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 84 -DSLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred -hhcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 112379999875432 23478899999997 9987653
No 196
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.07 Score=47.67 Aligned_cols=80 Identities=20% Similarity=0.205 Sum_probs=50.9
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE-E--EcCCCCCCccHHHHHHhhcC-
Q 016507 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 200 ~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
.++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. +.+... + .|-.+ .+.+.+.+.+...
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 81 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAA 81 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35788999997 9999999998888999 8998888776554332 223221 2 23332 1222222222111
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 82 ~~~id~vi~~ag~ 94 (250)
T PRK12939 82 LGGLDGLVNNAGI 94 (250)
T ss_pred cCCCCEEEECCCC
Confidence 379999999885
No 197
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.24 E-value=0.047 Score=45.45 Aligned_cols=90 Identities=19% Similarity=0.102 Sum_probs=58.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.|.+|||+|+|.+|..-++.+...|+ +|+++. ++..+.+..++.-. ++.+. +.+. .-.++|+|+-++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~~----dl~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSND----DIKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cChh----cCCCceEEEECC
Confidence 57899999999999998888888899 888884 43333344454211 22222 1111 012789999999
Q ss_pred CCHHHHHHHHHHhhcCCceEEEEcc
Q 016507 281 GLASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 281 g~~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
+.+. ++..+...+.. +.++....
T Consensus 79 ~d~e-~N~~i~~~a~~-~~~vn~~d 101 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD-FQWVNVVS 101 (157)
T ss_pred CCHH-HHHHHHHHHHH-CCcEEECC
Confidence 9887 77666666654 44555443
No 198
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.22 E-value=0.067 Score=50.28 Aligned_cols=94 Identities=18% Similarity=0.104 Sum_probs=64.9
Q ss_pred CCCCEEEEEccchhHHHHHHHH-HHcCCcEEEEEcCCchHHHHH-HH----cCCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDVISEKFEIG-KR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la-~~~g~~~Vi~~~~~~~~~~~~-~~----lga~~v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
+...+++|+|+|..|.+.+..+ ...++++|.+.++++++.+.+ +. ++... .... +..+.+ ...
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~-----~~~~~~-----~~a 193 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVN-----SADEAI-----EEA 193 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeC-----CHHHHH-----hcC
Confidence 4567899999999998776544 567888999999998876543 32 34331 1122 233333 278
Q ss_pred cEEEEccCCHHHHHHHHHHhhcCCceEEEEccCC
Q 016507 274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 274 dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
|+|+.|+++...+- . ..++++ -+++.+|...
T Consensus 194 DiVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 194 DIIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred CEEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence 99999998876333 3 888997 8888998754
No 199
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.21 E-value=0.025 Score=58.28 Aligned_cols=77 Identities=25% Similarity=0.274 Sum_probs=56.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch---------------------HHHHHHHcCCcEEEcCCCCCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 259 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 259 (388)
.+.+|+|+|+|+.|+.++..++..|+ +|+++++.+. ..++++++|++..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8988876652 4567778898877665321111
Q ss_pred cHHHHHHhhcCCCccEEEEccCCH
Q 016507 260 SVSQIIIDMTDGGADYCFECVGLA 283 (388)
Q Consensus 260 ~~~~~i~~~~~g~~dvvid~~g~~ 283 (388)
.+.+ +. .+||.||.++|..
T Consensus 388 ~~~~-l~----~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSD-LT----SEYDAVFIGVGTY 406 (639)
T ss_pred CHHH-HH----hcCCEEEEeCCCC
Confidence 2221 11 2799999999874
No 200
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.21 E-value=0.072 Score=48.48 Aligned_cols=111 Identities=23% Similarity=0.305 Sum_probs=68.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-E----EcCCCCCCccHHHHHHhh--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F----VNSKNCGDKSVSQIIIDM-- 268 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v----~~~~~~~~~~~~~~i~~~-- 268 (388)
.+..|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++.+ ++++... + .|-.+ .++..+.+...
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR 87 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence 5788999998 9999987777777898 666666777666555 3444332 2 22222 12233232111
Q ss_pred cCCCccEEEEccCCH-------------------------HHHHHHHHHhhcCC-ceEEEEccCCCCCcccc
Q 016507 269 TDGGADYCFECVGLA-------------------------SLVQEAYACCRKGW-GKTIVLGVDQPGSQLSL 314 (388)
Q Consensus 269 ~~g~~dvvid~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~ 314 (388)
.-|++|+.++..|-. .....++..|++.. |+|+.+++..+...+++
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 124899999977632 23455666666644 89999987654444433
No 201
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.21 E-value=0.021 Score=56.51 Aligned_cols=78 Identities=24% Similarity=0.332 Sum_probs=55.6
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc---------------------hHHHHHHHcCCcEEEcCCCCCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGDK 259 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~---------------------~~~~~~~~lga~~v~~~~~~~~~ 259 (388)
.+.+|+|+|+|+.|+.++..++..|+ +|++++..+ ...++++++|++..++..-. .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence 57899999999999999999999999 788887654 24567778898766554220 1
Q ss_pred cHHHHHHhhcCCCccEEEEccCCHH
Q 016507 260 SVSQIIIDMTDGGADYCFECVGLAS 284 (388)
Q Consensus 260 ~~~~~i~~~~~g~~dvvid~~g~~~ 284 (388)
++ .+.+.. .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111111 27999999999753
No 202
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.19 E-value=0.037 Score=51.61 Aligned_cols=91 Identities=25% Similarity=0.416 Sum_probs=61.2
Q ss_pred CEEEEEccchhHHHHHHHHHHcCC-cEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 016507 203 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 203 ~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
.+|.|+|.|.+|.+.+..++..|. .+|+++++++++.+.+++.|....+. .+..+.+ ...|+||.|+.
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 579999999999999888887774 38999999998888888877532111 1122222 26899999998
Q ss_pred CHHH---HHHHHHHhhcCCceEEEEcc
Q 016507 282 LASL---VQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 282 ~~~~---~~~~~~~l~~~~G~~v~~g~ 305 (388)
.... +......++++ ..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 7542 22333445554 55666654
No 203
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.15 E-value=0.05 Score=49.68 Aligned_cols=94 Identities=20% Similarity=0.278 Sum_probs=66.7
Q ss_pred cccchhhhhHHHHHHhcCC-CCCCEEEEEccch-hHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCC
Q 016507 181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (388)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~-~~~~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 258 (388)
.+||+....+. +.+..++ -.|.+|+|+|.|. +|.-++.++...|+ +|+++.+..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 46766555555 3344443 4789999999865 99999999999999 888876421
Q ss_pred ccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 259 ~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.++.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|..
T Consensus 193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 12333332 68999999999864444 457886 888899874
No 204
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.072 Score=48.24 Aligned_cols=79 Identities=22% Similarity=0.287 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCCcE-E--EcCCCCCCccHHHHHHhhc--CCCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--DGGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~~ 273 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +.++... . .|-.+ .+++.+.+.+.. .+..
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999998888999 999999887755443 3444321 1 23333 123333333321 1378
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
No 205
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.15 E-value=0.021 Score=49.74 Aligned_cols=92 Identities=16% Similarity=0.034 Sum_probs=57.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch-H-HHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-K-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~-~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
.+.+|||+|+|.+|...+..+...|+ +|+++.+... . .+++.. +. ..+..+. +.+.- + .++|+||-
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~-----~~~~~--l--~~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKE-----FEPSD--I--VDAFLVIA 76 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecC-----CChhh--c--CCceEEEE
Confidence 57899999999999998888888898 8888865321 1 122222 21 1122222 11100 1 27899999
Q ss_pred ccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 279 CVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
|++.+. ++..+...... +.++.....
T Consensus 77 aT~d~e-lN~~i~~~a~~-~~lvn~~d~ 102 (202)
T PRK06718 77 ATNDPR-VNEQVKEDLPE-NALFNVITD 102 (202)
T ss_pred cCCCHH-HHHHHHHHHHh-CCcEEECCC
Confidence 999988 66666655564 667766543
No 206
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.14 E-value=0.087 Score=46.69 Aligned_cols=92 Identities=23% Similarity=0.237 Sum_probs=60.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCc--EEEEEcCC----chH--------HHHHHHcCCcEEEcCCCCCCccHHHHH
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSVSQII 265 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~--~Vi~~~~~----~~~--------~~~~~~lga~~v~~~~~~~~~~~~~~i 265 (388)
-.+.+|+|+|+|..|..++..+...|++ +++.++++ .++ .++++.++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 4568999999999999999988888997 89999998 343 33444443211 0 1 1343433
Q ss_pred HhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEc
Q 016507 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 266 ~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g 304 (388)
. ++|++|.+++........++.+.++ ..+..+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 2 5899999997333124667777775 5555444
No 207
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.14 E-value=0.061 Score=49.47 Aligned_cols=44 Identities=27% Similarity=0.229 Sum_probs=38.0
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 243 (388)
..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 35678999999999999999999999989999999988776543
No 208
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.14 E-value=0.068 Score=52.68 Aligned_cols=78 Identities=24% Similarity=0.404 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchH--H-HHHHHcCCcE-EEcCCCCCCccHHHHHHh-hc--CCC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--F-EIGKRFGVTE-FVNSKNCGDKSVSQIIID-MT--DGG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~-~~~~~lga~~-v~~~~~~~~~~~~~~i~~-~~--~g~ 272 (388)
++.++||+|+ |.+|...++.+...|+ +|+++++.+.. . +...+++... ..|-.+ .+..+.+.+ .. .++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA---PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHHHHhCCC
Confidence 5789999987 9999999999988999 88888774322 2 2333455432 234443 222222222 21 237
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|++|++.|.
T Consensus 285 id~vi~~AG~ 294 (450)
T PRK08261 285 LDIVVHNAGI 294 (450)
T ss_pred CCEEEECCCc
Confidence 9999999883
No 209
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.10 E-value=0.032 Score=50.56 Aligned_cols=79 Identities=22% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCc-EE--EcCCCCCCccHHHHHHhhc--CCCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~~ 273 (388)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ ++.. .. .|-.+ .....+.+.+.. .+++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 4678999987 9999999998888899 89999988877665543 3321 12 23222 122333333322 2379
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|++.|.
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999998873
No 210
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.029 Score=50.51 Aligned_cols=79 Identities=23% Similarity=0.290 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE----EEcCCCCCCccHHHHHHhhcC--CCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE----FVNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~----v~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
.+.+|||+|+ |.+|...++.+...|+ +|+.+.++++..+....+.... ..|-.+ .+.+.+.+.+... +++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999997 9999999988888899 8999988876655554432211 233332 1223332322211 378
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|.+.|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 211
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.034 Score=51.48 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=53.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCC--cEE---EcCCCCCCccHHHHHHhhcC--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--TEF---VNSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga--~~v---~~~~~~~~~~~~~~i~~~~~--g 271 (388)
.+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +.++. ... .|-.+ .+.+.+.+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999987 9999999999988999 899999888776543 34442 111 34333 1223333332221 4
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999985
No 212
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.03 E-value=0.052 Score=52.35 Aligned_cols=90 Identities=23% Similarity=0.324 Sum_probs=58.6
Q ss_pred EEEEccchhHHHHHHHHHHcCC-cEEEEEcCCchHHHHHHH--cC--Cc-EEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 205 VVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR--FG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 205 VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~--lg--a~-~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
|+|+|+|.+|..+++.+....- .+|++.+++.++.+.+.. .+ +. ..+|..+ .+.+.++.. +.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND------PESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT------HHHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC------HHHHHHHHh-cCCEEEE
Confidence 7899999999999998876653 389999999998766543 22 22 2344443 222444433 5699999
Q ss_pred ccCCHHHHHHHHHHhhcCCceEEE
Q 016507 279 CVGLASLVQEAYACCRKGWGKTIV 302 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~~G~~v~ 302 (388)
|+|.......+-.|+..+ -.++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CCccchhHHHHHHHHHhC-CCeec
Confidence 999776566777777776 77877
No 213
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.041 Score=49.77 Aligned_cols=81 Identities=23% Similarity=0.322 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcc-c-hhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-----cCCcEE----EcCCCCCCccHHHHHHh
Q 016507 199 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF----VNSKNCGDKSVSQIIID 267 (388)
Q Consensus 199 ~~~~~~VlI~Ga-g-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga~~v----~~~~~~~~~~~~~~i~~ 267 (388)
+..+.++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+ ++...+ .|..+ ...+.+.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 445789999986 6 799999999999999 89998887766543321 343222 23333 1222222222
Q ss_pred hc--CCCccEEEEccCC
Q 016507 268 MT--DGGADYCFECVGL 282 (388)
Q Consensus 268 ~~--~g~~dvvid~~g~ 282 (388)
.. .+++|++|++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1479999999984
No 214
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.01 E-value=0.068 Score=45.88 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=61.4
Q ss_pred CCCCCCEEEEEccchhHHHHHHHHHHc-CCcEEEEEcCCchHHHHHHH----cCCcEEEcCCCCCCccHHHHHHhhcCCC
Q 016507 198 NVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGG 272 (388)
Q Consensus 198 ~~~~~~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g~ 272 (388)
.++++.+||-+|.|. |..++.+++.. ++ +|++++.+++..+.+++ .+.+.+ .... .+..+ +. . .+.
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~-~-~~~ 112 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FG-Q-EEK 112 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CC-C-CCC
Confidence 355689999998754 55566666544 45 99999999887766653 454321 1111 12221 11 1 238
Q ss_pred ccEEEEccCC--HHHHHHHHHHhhcCCceEEEEc
Q 016507 273 ADYCFECVGL--ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 273 ~dvvid~~g~--~~~~~~~~~~l~~~~G~~v~~g 304 (388)
||+|+-.... ...+..+.+.++++ |+++.+-
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 9999864332 24467889999998 9998774
No 215
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.99 E-value=0.069 Score=47.33 Aligned_cols=105 Identities=21% Similarity=0.245 Sum_probs=72.4
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCC-cEEEEEcCCchHHHHHHH----cCCcEEEcCCCCCCccHHHHHHh
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 267 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~ 267 (388)
+...+++.+|++|+=.|.|+ |.+++-+|++.|- .+|+..+..+++.+.+++ +|....+.... .+..+.+-.
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv~~~~~~ 161 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDVREGIDE 161 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccccccccc
Confidence 34568899999999988766 8888888987764 599999998888877664 34433222221 222222211
Q ss_pred hcCCCccEEEEccCCH-HHHHHHHHHhhcCCceEEEEcc
Q 016507 268 MTDGGADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 268 ~~~g~~dvvid~~g~~-~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
..||.||==...+ ..++.+.+.|.++ |.++.|-.
T Consensus 162 ---~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 162 ---EDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ---cccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 1788885444444 5588999999998 99998853
No 216
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.039 Score=50.29 Aligned_cols=78 Identities=24% Similarity=0.272 Sum_probs=51.7
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcC-CcE-EEcCCCCCCccHHHHHHhhcC--CCccE
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-VTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 275 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~~--g~~dv 275 (388)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +.++ +.. ..|-.+ .+++.+.+.+... ++.|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 578999997 9999999988888899 899988888776543 3344 222 234333 1333333333222 47999
Q ss_pred EEEccCC
Q 016507 276 CFECVGL 282 (388)
Q Consensus 276 vid~~g~ 282 (388)
+|++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 217
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.97 E-value=0.021 Score=50.27 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=65.7
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCC-cEEEEEcCCchHHHHHHH----cCCcE--EEcCCCCCCccHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 265 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i 265 (388)
+.+...++++++||-+|.|. |..++.+++..+. .+|++++.+++..+.+++ +|.+. ++..+ ..+.+
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQGW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccCC
Confidence 45667789999999998755 6666677776542 269999999887766553 45432 22211 11111
Q ss_pred HhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEE
Q 016507 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 266 ~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
. ..+.||+|+-............+.|+++ |+++..
T Consensus 142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred c--ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 0 1137999876554444467888999997 998764
No 218
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.96 E-value=0.075 Score=46.27 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
.+.+|+|+|.|++|..+++.+...|..++..+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999876
No 219
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.041 Score=49.85 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCc-EE--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+.. ++ .|..+ ...+.+.+.+.. -
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 9999999998888899 99999988766543322 2222 12 33333 122222222221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 379999998873
No 220
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.94 E-value=0.18 Score=45.69 Aligned_cols=103 Identities=16% Similarity=0.210 Sum_probs=60.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch-------------------HH----HHHHHcCC-cEEEcCCCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGV-TEFVNSKNC 256 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~~----~~~~~lga-~~v~~~~~~ 256 (388)
.+.+|+|+|.|++|..++..+-..|..+++.+|.+.- |. +.++++.. ..|....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4578999999999999999999999889999886531 11 11222221 112111110
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
. ..+.+.++...++|+||||+........+.+......-.++..|..
T Consensus 109 i---~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 I---TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred c---ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 0 1122233333379999999998653444444444431345555543
No 221
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.93 E-value=0.22 Score=43.07 Aligned_cols=104 Identities=21% Similarity=0.384 Sum_probs=63.0
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE--EEcCCCCCCccHHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 266 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~ 266 (388)
+.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++.+. ++.. +..+.+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~ 104 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLA 104 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHh
Confidence 44566778899988887644 5555666655432399999999988776654 45432 2221 2222222
Q ss_pred hhcCCCccE-EEEccCC-HHHHHHHHHHhhcCCceEEEEcc
Q 016507 267 DMTDGGADY-CFECVGL-ASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 267 ~~~~g~~dv-vid~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
... ..+|. +++.... ...+..+.+.|+++ |.++....
T Consensus 105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 221 23344 4543222 34478889999997 99887754
No 222
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.048 Score=50.41 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE-E--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE-F--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+ .+.+. + .|-.+ .+.+.+.+.+.. .
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 3578999987 9999999998888899 99999998876544322 23221 2 23222 122323232221 2
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|+++++.|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 379999999874
No 223
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.89 E-value=0.04 Score=49.92 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCc-EE--EcCCCCCCccHHHHHHhhcC--CCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.. .+.. .. .|-.+ .....+.+.+... ++.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4689999987 9999999998888899 89999888776655544 2321 11 23332 1223333333222 378
Q ss_pred cEEEEccC
Q 016507 274 DYCFECVG 281 (388)
Q Consensus 274 dvvid~~g 281 (388)
|++|++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999886
No 224
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.87 E-value=0.057 Score=48.32 Aligned_cols=79 Identities=16% Similarity=0.270 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch--HHHHHHHcCCcE-E--EcCCCCCCccHHHHHHhhcC--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~~--g~ 272 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++++++. ..+.+++++... . .|-.+ .+.+...+.+... ++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence 4789999997 9999999988888899 8999887652 123334444321 2 23332 1333333333221 37
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+++++.|.
T Consensus 81 ~d~li~~ag~ 90 (248)
T TIGR01832 81 IDILVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 225
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.045 Score=48.47 Aligned_cols=79 Identities=18% Similarity=0.162 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHH-HHH---HcCCcEE-EcCCCCCCccHHHHHHhhcC--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGK---RFGVTEF-VNSKNCGDKSVSQIIIDMTD--GG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~---~lga~~v-~~~~~~~~~~~~~~i~~~~~--g~ 272 (388)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+ .+. ..+...+ .|..+ ..++.+.+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4789999997 9999999998888899 8999998776532 222 2233221 23222 1233333332221 37
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+||++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998874
No 226
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.87 E-value=0.051 Score=48.64 Aligned_cols=79 Identities=23% Similarity=0.313 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE---EEcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE---FVNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~---v~~~~~~~~~~~~~~i~~~~~-- 270 (388)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. ..+... ..|-.+ .....+.+.+...
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 9999999999888899 8999998876654332 234321 223222 1223333333222
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 81 ~~id~vi~~ag~ 92 (253)
T PRK08217 81 GQLNGLINNAGI 92 (253)
T ss_pred CCCCEEEECCCc
Confidence 368999999873
No 227
>PRK07574 formate dehydrogenase; Provisional
Probab=95.87 E-value=0.074 Score=50.97 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=55.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+..+.+++... .++.+.+. ..|+|+-+.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~l 256 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLVS-----VCDVVTIHC 256 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHhh-----cCCEEEEcC
Confidence 56799999999999999999999999 99999887644443334443211 12222221 456666666
Q ss_pred CCHHHH-----HHHHHHhhcCCceEEEEc
Q 016507 281 GLASLV-----QEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 281 g~~~~~-----~~~~~~l~~~~G~~v~~g 304 (388)
+..... ...+..|+++ ..+|.++
T Consensus 257 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 533211 2445556664 5555554
No 228
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.86 E-value=0.047 Score=48.87 Aligned_cols=79 Identities=19% Similarity=0.186 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcC--Cc-EE--EcCCCCCCccHHHHHHhhc--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--VT-EF--VNSKNCGDKSVSQIIIDMT--DG 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lg--a~-~v--~~~~~~~~~~~~~~i~~~~--~g 271 (388)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. .+. .. .. .|-.+ ...+...+.+.. .+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence 4568999997 9999999988888899 7999999887655433 222 11 11 22222 123333333221 13
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|+||.+.|.
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 79999998875
No 229
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.052 Score=48.54 Aligned_cols=79 Identities=22% Similarity=0.252 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCCcE-E--EcCCCCCCccHHHHHHhhc--CCCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--DGGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~~ 273 (388)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... . .|..+ ..+....+.+.. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999999988999 899998887665433 3455432 1 23222 122222222221 1379
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|++.|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999998874
No 230
>PRK00536 speE spermidine synthase; Provisional
Probab=95.83 E-value=0.037 Score=49.93 Aligned_cols=100 Identities=12% Similarity=-0.055 Sum_probs=67.1
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCC-cEEEcCCCCCCccHHHHHHhhcCCCccEE-
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYC- 276 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga-~~v~~~~~~~~~~~~~~i~~~~~g~~dvv- 276 (388)
...++|||+|+|- |.++=+++|+-. +|..++.+++-.+.+++ ++. ...++... -.+...+.+...+.||+|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence 4458999998766 666778888853 89999999988888887 321 11233222 222223333333489998
Q ss_pred EEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 277 FECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 277 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
+|......-.+.+.++|+++ |.++.-+.+
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~s 173 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVAKH 173 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECCCC
Confidence 55566666578899999997 999877653
No 231
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.83 E-value=0.13 Score=43.09 Aligned_cols=87 Identities=24% Similarity=0.230 Sum_probs=58.4
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~ 283 (388)
+|-++|.|.+|...+.-+...|+ +|.+.++++++.+.+.+.|+..+ .+..+.+. ..|+||-|+...
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~-----~~dvvi~~v~~~ 68 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAE-----QADVVILCVPDD 68 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHH-----HBSEEEE-SSSH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhh-----cccceEeecccc
Confidence 68899999999999888888899 99999999999988888775432 12333332 458999998886
Q ss_pred HHHHHHHHH------hhcCCceEEEEcc
Q 016507 284 SLVQEAYAC------CRKGWGKTIVLGV 305 (388)
Q Consensus 284 ~~~~~~~~~------l~~~~G~~v~~g~ 305 (388)
..+...+.- +.++ ..++.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 656554443 3443 45555544
No 232
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.79 E-value=0.023 Score=55.99 Aligned_cols=93 Identities=12% Similarity=0.107 Sum_probs=64.6
Q ss_pred hcCCCCCCEEE----EEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc-EEEcCCCCCCccHHHHHHhhc
Q 016507 196 TANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 196 ~~~~~~~~~Vl----I~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~ 269 (388)
..++++|+++| |+|+ |++|.+++|+++..|+ .|+++...+.+....+..+.+ .++|.+. ..+.+.+....
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~~ 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKALY 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHHH
Confidence 45677888888 8865 9999999999999999 899887666644444444444 4666665 34444444331
Q ss_pred CCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCC
Q 016507 270 DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 270 ~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
..+...++.+.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 2256777888886 8988887643
No 233
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.07 Score=46.95 Aligned_cols=77 Identities=19% Similarity=0.249 Sum_probs=52.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+ ...+.+.+.+...+++|+++.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 46899987 9999998887777899 8999998887777666655432 233333 12233322233223799999987
Q ss_pred CC
Q 016507 281 GL 282 (388)
Q Consensus 281 g~ 282 (388)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 75
No 234
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.05 Score=48.92 Aligned_cols=78 Identities=23% Similarity=0.261 Sum_probs=50.0
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCc-EEE--cCCCCCCccHHHHHHhhcC--C
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~--g 271 (388)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+.. ..+ |-.+ .+.+.+.+.+... +
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence 468999987 9999999999888999 89999888766544332 2221 222 3222 1233333333221 3
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|++|++.|.
T Consensus 78 ~id~lI~~ag~ 88 (252)
T PRK07677 78 RIDALINNAAG 88 (252)
T ss_pred CccEEEECCCC
Confidence 78999998873
No 235
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.054 Score=49.52 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-CCcE---EEcCCCCCCccHHHHHHhhcC--CCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~~---v~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+... +... ..|-.+ .+.+.+.+.+... +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3568999987 9999999998888899 899999988876655543 2111 223333 1223333332221 368
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|+++++.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999885
No 236
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.76 E-value=0.069 Score=46.56 Aligned_cols=94 Identities=18% Similarity=0.149 Sum_probs=59.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch-HHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
.|.+|||+|+|.+|..-++.+...|+ +|++++.... ..+.+...|- ..+-.++ -. ...+ .++++||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~-i~~~~~~---~~-~~dl-----~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGG-ITWLARC---FD-ADIL-----EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCC-EEEEeCC---CC-HHHh-----CCcEEEEEC
Confidence 46799999999999999999999999 8888865432 2222223331 1121222 11 1111 279999999
Q ss_pred cCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 280 VGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.+.+..-.......+.. |..+.....
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d~ 102 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVDD 102 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCC
Confidence 99886344555555564 777766543
No 237
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.057 Score=48.57 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=49.4
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE---EEcCCCCCCccHHHHHHhhcCCCc
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE---FVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~---v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+.. .+... ..|..+ . +.+.+...+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---A---IDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---H---HHHHHHhcCCC
Confidence 357999997 9999999999998999 89999887765544332 22221 224333 1 23333333489
Q ss_pred cEEEEccC
Q 016507 274 DYCFECVG 281 (388)
Q Consensus 274 dvvid~~g 281 (388)
|++|++.|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999987
No 238
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=95.75 E-value=0.012 Score=53.72 Aligned_cols=99 Identities=19% Similarity=0.305 Sum_probs=61.0
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCc---EEEcCCCCCCccHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQII 265 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i 265 (388)
+.+.+++++|++||-+|.| -|.+++.+++..|+ +|++++.|+++.+++++ .|.. .+.. . ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~-~-----D~---- 121 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL-Q-----DY---- 121 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE-S------G----
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE-e-----ec----
Confidence 5678899999999999976 46677778887899 99999999998887754 4532 1221 1 11
Q ss_pred HhhcCCCccEEEE-----ccCC---HHHHHHHHHHhhcCCceEEEEcc
Q 016507 266 IDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 266 ~~~~~g~~dvvid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
+++. +.||.|+. .+|. +..+..+.+.|+|+ |+++.-..
T Consensus 122 ~~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 122 RDLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred cccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 1221 28998864 3332 23378899999998 99875443
No 239
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.75 E-value=0.07 Score=42.53 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=57.8
Q ss_pred EEEEcc-chhHHHHHHHHHHcC--CcEEEEEcCCchHH---HHHHHcCCcEEEcCCCCCCccHHH---------------
Q 016507 205 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEKF---EIGKRFGVTEFVNSKNCGDKSVSQ--------------- 263 (388)
Q Consensus 205 VlI~Ga-g~vG~~ai~la~~~g--~~~Vi~~~~~~~~~---~~~~~lga~~v~~~~~~~~~~~~~--------------- 263 (388)
|.|+|+ |+||..++.+.+... + +|++..-...-. +.++++.+..+.-.++.....+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999998876 5 677765444322 334457777665544300011111
Q ss_pred -HHHhhcC-CCccEEEEccCCHHHHHHHHHHhhcCCceEEEEcc
Q 016507 264 -IIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 264 -~i~~~~~-g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
.+.+... ..+|+|+.++.+-.++...+..+.. |+-+.+++
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~--gk~iaLAN 121 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA--GKDIALAN 121 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT--TSEEEE--
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC--CCeEEEec
Confidence 1222222 2789999988888778888888886 56666654
No 240
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.055 Score=48.66 Aligned_cols=79 Identities=22% Similarity=0.220 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE---EEcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE---FVNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~---v~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ .+... ..|-.+ .+.+.+.+.+.. .
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4788999987 9999999998888999 89999888776544322 23221 233333 123333333221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|+++.+.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 479999998873
No 241
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.74 E-value=0.048 Score=56.46 Aligned_cols=77 Identities=27% Similarity=0.274 Sum_probs=53.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch---------------------HHHHHHHcCCcEEEcCCCCCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 259 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 259 (388)
.+.+|+|+|+|+.|+.++..+...|+ +|+++++.+. ..+.++++|++...+..-..+-
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 57899999999999999999999999 8999986542 3455667787654443210001
Q ss_pred cHHHHHHhhcCCCccEEEEccCCH
Q 016507 260 SVSQIIIDMTDGGADYCFECVGLA 283 (388)
Q Consensus 260 ~~~~~i~~~~~g~~dvvid~~g~~ 283 (388)
.+. .+. .+||.||.++|..
T Consensus 405 ~~~-~~~----~~~DavilAtGa~ 423 (654)
T PRK12769 405 SLE-SLL----EDYDAVFVGVGTY 423 (654)
T ss_pred CHH-HHH----hcCCEEEEeCCCC
Confidence 121 111 2799999988853
No 242
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.72 E-value=0.067 Score=44.18 Aligned_cols=95 Identities=22% Similarity=0.231 Sum_probs=59.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHH-HHHcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~~dvvi 277 (388)
..+.+|+|+|+|.+|...++.+...|..+|+++++++++.+. ++.++... .... .+..+. -+++|+|+
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL-----LAEADLII 86 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc-----cccCCEEE
Confidence 457899999999999999988888764489999988876654 44555421 0111 112111 13799999
Q ss_pred EccCCHHH----HHHHHHHhhcCCceEEEEcc
Q 016507 278 ECVGLASL----VQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 278 d~~g~~~~----~~~~~~~l~~~~G~~v~~g~ 305 (388)
.|++.... .......++++ ..++.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~ 117 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVVY 117 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence 99887541 11222345554 55555644
No 243
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.058 Score=49.28 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=49.3
Q ss_pred CCCEEEEEccc---hhHHHHHHHHHHcCCcEEEEEcCCchHHHH----HHHcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~lga~~v~--~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.++||+|++ ++|.++++.+...|+ +|+.++++++..+. .+++|....+ |-.+ .++..+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 56789999974 899999998888999 88888776532222 2334533222 3332 1223333333222
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
|.+|+++++.|.
T Consensus 83 ~g~iD~lVnnAG~ 95 (271)
T PRK06505 83 WGKLDFVVHAIGF 95 (271)
T ss_pred hCCCCEEEECCcc
Confidence 479999998873
No 244
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.71 E-value=0.03 Score=51.53 Aligned_cols=135 Identities=21% Similarity=0.295 Sum_probs=72.2
Q ss_pred ceeeeEEeecCceEEcCCCCCccccccccchhhhhHHHHHHh-cCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEc
Q 016507 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233 (388)
Q Consensus 155 ~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~ 233 (388)
.|.+|-.-+.+.++.+...+.+-.+ ....|... +... .-..+|++||=+|.|+ |.+++..++ +|+++|+++|
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lc-l~~l~~~~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~D 191 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLC-LELLEKYVKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAID 191 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SS----HCHHHHHH-HHHHHHHSSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEE
T ss_pred CCcccCCCCCcEEEEECCCCcccCC----CCHHHHHH-HHHHHHhccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEec
Confidence 4555422234456666665544332 23333332 2111 1267889999888644 555555555 4888999999
Q ss_pred CCchHHHHHHH----cCCc-EEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHHH---HHHHHHHhhcCCceEEEEcc
Q 016507 234 VISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL---VQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 234 ~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~---~~~~~~~l~~~~G~~v~~g~ 305 (388)
.++.-.+.++. .|.. .+.-... .+. ..++||+|+-.+-.... .....+.++++ |.++..|.
T Consensus 192 iDp~Av~~a~~N~~~N~~~~~~~v~~~---~~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGI 260 (295)
T PF06325_consen 192 IDPLAVEAARENAELNGVEDRIEVSLS---EDL-------VEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGI 260 (295)
T ss_dssp SSCHHHHHHHHHHHHTT-TTCEEESCT---SCT-------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEEe---ccc-------ccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccc
Confidence 99876555443 3432 2211111 111 12489999987766542 34556678887 99999987
Q ss_pred CC
Q 016507 306 DQ 307 (388)
Q Consensus 306 ~~ 307 (388)
..
T Consensus 261 l~ 262 (295)
T PF06325_consen 261 LE 262 (295)
T ss_dssp EG
T ss_pred cH
Confidence 53
No 245
>PRK06128 oxidoreductase; Provisional
Probab=95.70 E-value=0.15 Score=47.26 Aligned_cols=79 Identities=23% Similarity=0.204 Sum_probs=47.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchH------HHHHHHcCCcEE---EcCCCCCCccHHHHHHhhc-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK------FEIGKRFGVTEF---VNSKNCGDKSVSQIIIDMT- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~------~~~~~~lga~~v---~~~~~~~~~~~~~~i~~~~- 269 (388)
.+.++||+|+ |.+|...+..+...|+ +|+.+.++.+. .+.++..+.... .|-.+ .....+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 4679999987 9999999988888899 78777554321 122333443221 23322 122233333222
Q ss_pred -CCCccEEEEccCC
Q 016507 270 -DGGADYCFECVGL 282 (388)
Q Consensus 270 -~g~~dvvid~~g~ 282 (388)
.+++|++|++.|.
T Consensus 131 ~~g~iD~lV~nAg~ 144 (300)
T PRK06128 131 ELGGLDILVNIAGK 144 (300)
T ss_pred HhCCCCEEEECCcc
Confidence 1379999998873
No 246
>PRK06196 oxidoreductase; Provisional
Probab=95.69 E-value=0.064 Score=50.10 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcC-CcE-EEcCCCCCCccHHHHHHhhcC--CCcc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-VTE-FVNSKNCGDKSVSQIIIDMTD--GGAD 274 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~~--g~~d 274 (388)
.+.+|||+|+ |.+|..++..+...|+ +|+++++++++.+.+ ..+. +.. ..|-.+ ...+.+.+.+... +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4678999997 9999999988888899 899998887765433 2222 221 123333 1223333333222 3799
Q ss_pred EEEEccCC
Q 016507 275 YCFECVGL 282 (388)
Q Consensus 275 vvid~~g~ 282 (388)
++|++.|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
No 247
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.072 Score=48.37 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c----CCc-E--EEcCCCCCCccHHHHHHhhc-C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-E--FVNSKNCGDKSVSQIIIDMT-D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~--v~~~~~~~~~~~~~~i~~~~-~ 270 (388)
.+.++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ + +.. . ..|-.+ ..+..+.+.+.. .
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4778999987 9999999999888999 89999988776544332 2 322 1 233333 123333333221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
|++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 479999998874
No 248
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.64 E-value=0.067 Score=48.39 Aligned_cols=79 Identities=14% Similarity=0.328 Sum_probs=48.5
Q ss_pred CCCEEEEEccc---hhHHHHHHHHHHcCCcEEEEEcCCchHHH----HHHHcCCcEEE--cCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~----~~~~lga~~v~--~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.++||+|++ ++|.+.++.+...|+ +|+.++++++..+ ..++++....+ |-.+ .++..+.+.+...
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE--PGQLEAVFARIAEE 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC--HHHHHHHHHHHHHH
Confidence 46889999863 899999988888899 8888887754322 22233432222 3222 1233333332221
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
|+.|+++++.|.
T Consensus 86 ~g~ld~lv~nAg~ 98 (258)
T PRK07533 86 WGRLDFLLHSIAF 98 (258)
T ss_pred cCCCCEEEEcCcc
Confidence 479999998863
No 249
>PRK06484 short chain dehydrogenase; Validated
Probab=95.61 E-value=0.17 Score=50.78 Aligned_cols=102 Identities=23% Similarity=0.262 Sum_probs=66.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcE---EEcCCCCCCccHHHHHHhhcC--CCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~---v~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
.+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++... ..|-.+ .+...+.+.+... |.+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 5788999987 9999999998888999 99999988877665543 44322 233333 1233333333221 379
Q ss_pred cEEEEccCCH--------------------------HHHHHHHHHhhcCCceEEEEccC
Q 016507 274 DYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 274 dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
|++|++.|.. ...+.++..+..+ |+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988742 0123334555565 899988764
No 250
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.60 E-value=0.07 Score=49.92 Aligned_cols=94 Identities=11% Similarity=0.097 Sum_probs=61.0
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
+|||+|+ |.+|..++..+...|+ +|.++.++.++...+...+++.+. |..+ . +.+.+... ++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence 6999997 9999999998888898 899998887766555555665432 2222 1 12222222 7899999876
Q ss_pred CHH------------HHHHHHHHhhcCCc--eEEEEccC
Q 016507 282 LAS------------LVQEAYACCRKGWG--KTIVLGVD 306 (388)
Q Consensus 282 ~~~------------~~~~~~~~l~~~~G--~~v~~g~~ 306 (388)
... .....++.+... | +++.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccc
Confidence 321 123445555553 4 78877653
No 251
>PRK05717 oxidoreductase; Validated
Probab=95.60 E-value=0.072 Score=47.95 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHH-HHHcCCcE---EEcCCCCCCccHHHHHHhhcC--CCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga~~---v~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
.|.++||+|+ |.+|..++..+...|+ +|+.+++++++.+. .+.++... ..|-.+ ...+.+.+.+... +++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999988888898 89999877665443 33344221 123222 1223222333322 368
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 252
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.58 E-value=0.075 Score=47.22 Aligned_cols=79 Identities=23% Similarity=0.284 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcEE---EcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF---VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v---~~~~~~~~~~~~~~i~~~~~-- 270 (388)
++.+|||+|+ |.+|...++.+...|+ +|+++.+++++.+.+ +..+.... .|-.+ ...+.+.+.+...
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3568999997 9999999998888899 799999987764433 22343222 23332 1233333333221
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|.++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 368999999865
No 253
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.58 E-value=0.25 Score=43.88 Aligned_cols=101 Identities=20% Similarity=0.192 Sum_probs=58.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch-------------------HH----HHHHHcCCc-EEEcCCCCC
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGVT-EFVNSKNCG 257 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~~----~~~~~lga~-~v~~~~~~~ 257 (388)
+.+|+|+|.|++|..+++.+-..|..+++.+|.+.= |. +.++++..+ .+.-.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~-- 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE-- 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee--
Confidence 468999999999999999999999999999986541 11 111222211 1111111
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEcc
Q 016507 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 258 ~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
.-..+.+.++...++|+|+||+........+.+......-.++..+.
T Consensus 89 -~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g 135 (231)
T cd00755 89 -FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMG 135 (231)
T ss_pred -ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence 00112233333347999999999876444455544443133554444
No 254
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.56 E-value=0.076 Score=48.74 Aligned_cols=94 Identities=17% Similarity=0.114 Sum_probs=59.1
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
..+.+|||+|+|.+|.+++..+...|+.+|+++.++.++.+.+. .++...-+.. . .+..+.+ .++|+||+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence 45678999999999999999999999669999999988766543 3332100110 0 0011111 27999999
Q ss_pred ccCCHHHH-----HHHHHHhhcCCceEEEE
Q 016507 279 CVGLASLV-----QEAYACCRKGWGKTIVL 303 (388)
Q Consensus 279 ~~g~~~~~-----~~~~~~l~~~~G~~v~~ 303 (388)
|++....- ......+.++ ..++.+
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 98754310 1223556664 555555
No 255
>PLN03139 formate dehydrogenase; Provisional
Probab=95.55 E-value=0.11 Score=49.76 Aligned_cols=46 Identities=24% Similarity=0.294 Sum_probs=36.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga 247 (388)
.|.+|.|+|.|.||...++.++.+|+ +|++.+++....+.....|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57899999999999999999999999 89999877544444444443
No 256
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.078 Score=47.67 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+.+. . .|-.+ .....+.+.+...
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 9999999998888999 8999988877655432 223222 2 23322 1222223332222
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 257
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.53 E-value=0.12 Score=47.41 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=37.3
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 243 (388)
..+.++||+|+|+.|.+++..+...|+.+|+++.++.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34678999999999999998888899889999999988766553
No 258
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.52 E-value=0.066 Score=49.79 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=67.7
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HcCCcEEEEEcCCchHHHH-HHHcC---CcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEI-GKRFG---VTEFVNSKNCGDKSVSQIIIDMTDGGAD 274 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~-~~~lg---a~~v~~~~~~~~~~~~~~i~~~~~g~~d 274 (388)
....+++|+|+|..|.+.++.+. ..+.++|.+..+++++.+. +.++. .... . .+..+.+ .+.|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~-----~~~~~av-----~~aD 190 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P-----LDGEAIP-----EAVD 190 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E-----CCHHHHh-----hcCC
Confidence 45678999999999999888775 4677789999999887654 44443 2211 1 1233333 2799
Q ss_pred EEEEccCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCH
Q 016507 275 YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 316 (388)
Q Consensus 275 vvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~ 316 (388)
+|+.|+++...+-.. .++++ -+++.+|.... ..-.++.
T Consensus 191 iVitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p-~~~El~~ 228 (304)
T PRK07340 191 LVVTATTSRTPVYPE--AARAG-RLVVAVGAFTP-DMAELAP 228 (304)
T ss_pred EEEEccCCCCceeCc--cCCCC-CEEEecCCCCC-CcccCCH
Confidence 999999877544333 37886 88999987543 2334553
No 259
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.51 E-value=0.084 Score=47.59 Aligned_cols=79 Identities=22% Similarity=0.268 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcEE---EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF---VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v---~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++.+.... .|-.+ ...+.+.+.+.. .
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4679999997 9999999998888899 899998887654332 23343321 22222 122222222221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
++.|++|.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 368999998874
No 260
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.49 E-value=0.13 Score=44.33 Aligned_cols=76 Identities=26% Similarity=0.300 Sum_probs=49.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c----CCcE-EEcCCCCCCccHHHHHHhhcCCCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~~-v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ + +... ..+..+ ..++.+.+ .+.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence 5689999997 9999988888877887 89999888776654432 2 2221 122222 12222222 278
Q ss_pred cEEEEccCCHH
Q 016507 274 DYCFECVGLAS 284 (388)
Q Consensus 274 dvvid~~g~~~ 284 (388)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999887654
No 261
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.11 Score=46.86 Aligned_cols=81 Identities=23% Similarity=0.299 Sum_probs=49.5
Q ss_pred CCCCCEEEEEcc-chhHHHHHHHHHHc-CCcEEEEEcCCchH-HH-H---HHHcCC-c-EE--EcCCCCCCccHHHHHHh
Q 016507 199 VEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK-FE-I---GKRFGV-T-EF--VNSKNCGDKSVSQIIID 267 (388)
Q Consensus 199 ~~~~~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~-~~-~---~~~lga-~-~v--~~~~~~~~~~~~~~i~~ 267 (388)
+-.+.+|||+|+ |++|...++-+... |+ +|+++++++++ .+ . ++..+. . ++ .|-.+ ..+..+.+.+
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~ 81 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA 81 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence 445678999997 99999988876555 57 89999888764 33 2 223332 1 22 33332 1333333333
Q ss_pred hcC-CCccEEEEccCC
Q 016507 268 MTD-GGADYCFECVGL 282 (388)
Q Consensus 268 ~~~-g~~dvvid~~g~ 282 (388)
... ++.|+++.+.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 322 489999887764
No 262
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.47 E-value=0.083 Score=47.70 Aligned_cols=76 Identities=20% Similarity=0.228 Sum_probs=48.6
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcEE--EcCCCCCCccHHHHHHhhc--CCCcc
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMT--DGGAD 274 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v--~~~~~~~~~~~~~~i~~~~--~g~~d 274 (388)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+-.+. .|-.+ .+++.+.+.+.. .+++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcCCCC
Confidence 6899987 9999999988888899 8999988876654332 2232122 23222 123333333322 23799
Q ss_pred EEEEccCC
Q 016507 275 YCFECVGL 282 (388)
Q Consensus 275 vvid~~g~ 282 (388)
++|++.|.
T Consensus 79 ~li~naG~ 86 (259)
T PRK08340 79 ALVWNAGN 86 (259)
T ss_pred EEEECCCC
Confidence 99998874
No 263
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.09 Score=47.04 Aligned_cols=79 Identities=25% Similarity=0.295 Sum_probs=49.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-Hc---CCc-E--EEcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF---GVT-E--FVNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l---ga~-~--v~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+. .+ +.. . ..|-.+ .+.+.+...+.. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999997 9999999998888899 8999998876543332 11 211 1 233332 122222222221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 369999999884
No 264
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.46 E-value=0.037 Score=50.54 Aligned_cols=45 Identities=33% Similarity=0.319 Sum_probs=39.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 244 (388)
.++.++||+|+|+.+.+++..+...|+++|+++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 357999999999999999999999998899999999988776654
No 265
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.079 Score=47.99 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c-----CCcE---EEcCCCCCCccHHHHHHhhc-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F-----GVTE---FVNSKNCGDKSVSQIIIDMT- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~~---v~~~~~~~~~~~~~~i~~~~- 269 (388)
.+.++||+|+ +.+|.+.++.+...|+ +|+.+++++++.+.+.+ + +... ..|-.+ .+.+.+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999987 9999999999988999 89999988776543321 1 1111 224333 122333233222
Q ss_pred -CCCccEEEEccCC
Q 016507 270 -DGGADYCFECVGL 282 (388)
Q Consensus 270 -~g~~dvvid~~g~ 282 (388)
-+++|+++++.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 1379999999874
No 266
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.45 E-value=0.088 Score=47.35 Aligned_cols=79 Identities=24% Similarity=0.318 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-E--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.+|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..|... . .|-.+ .+.+.+.+.+.. .
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4789999987 9999999998888899 899998887654432 2223221 2 23333 123333333222 2
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
++.|++|++.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999999874
No 267
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.44 E-value=0.06 Score=49.50 Aligned_cols=76 Identities=13% Similarity=0.019 Sum_probs=51.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~-v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
.+.+|||+|+|++|.+++..+...|+.+|+++.|+.+|.+.+. .++... +.... .+ +.+.... ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~-~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GD-SGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----ch-hhhhhcc-cCCCEEEE
Confidence 5789999999999999999999999989999999988776543 333211 11000 00 1111111 27899999
Q ss_pred ccCCH
Q 016507 279 CVGLA 283 (388)
Q Consensus 279 ~~g~~ 283 (388)
|++..
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98764
No 268
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.44 E-value=0.24 Score=39.95 Aligned_cols=35 Identities=31% Similarity=0.391 Sum_probs=30.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
..+|+|.|+|++|..++..+...|+.++..+|.+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999999999888998999997654
No 269
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.41 E-value=0.078 Score=49.76 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-----cC-Cc---EEEcCCCCCCccHHHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FG-VT---EFVNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lg-a~---~v~~~~~~~~~~~~~~i~~~~~ 270 (388)
.|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ .+ .. ...|-.+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 4789999997 9999998887777899 89999999887654322 11 11 1234332 11233444554444
Q ss_pred C-CccEEEEccCC
Q 016507 271 G-GADYCFECVGL 282 (388)
Q Consensus 271 g-~~dvvid~~g~ 282 (388)
+ .+|+++++.|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 4 67799998763
No 270
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.099 Score=47.43 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE---EEcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~ 270 (388)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ...+... .+|..+ ...+.+.+.+.. .
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 9999999998888999 899998877654322 2223221 233333 122333333322 1
Q ss_pred CCccEEEEccC
Q 016507 271 GGADYCFECVG 281 (388)
Q Consensus 271 g~~dvvid~~g 281 (388)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 37899998875
No 271
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.40 E-value=0.24 Score=43.35 Aligned_cols=103 Identities=18% Similarity=0.234 Sum_probs=68.8
Q ss_pred HhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHH----cCCcE-EEcCCCCCCccHHHHHHhh
Q 016507 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTE-FVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~-v~~~~~~~~~~~~~~i~~~ 268 (388)
..++.+...+||=+|. .+|..++.+|..+. -.+++.++.++++.+.+++ .|.+. +.-... .+..+.+.+.
T Consensus 53 ~L~~~~~~k~iLEiGT-~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~~~ 128 (219)
T COG4122 53 LLARLSGPKRILEIGT-AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLSRL 128 (219)
T ss_pred HHHHhcCCceEEEeec-ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHHhc
Confidence 3455678888999875 34777778887665 2389999999999888775 46654 211111 1344555553
Q ss_pred cCCCccEEE-EccCC--HHHHHHHHHHhhcCCceEEE
Q 016507 269 TDGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIV 302 (388)
Q Consensus 269 ~~g~~dvvi-d~~g~--~~~~~~~~~~l~~~~G~~v~ 302 (388)
..+.||+|| |+--. +..++.+++.+++| |.++.
T Consensus 129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~ 164 (219)
T COG4122 129 LDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVA 164 (219)
T ss_pred cCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEE
Confidence 345899994 55433 34489999999996 66653
No 272
>PRK06194 hypothetical protein; Provisional
Probab=95.40 E-value=0.092 Score=48.16 Aligned_cols=79 Identities=22% Similarity=0.310 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHc---CCcE-EE--cCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTE-FV--NSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l---ga~~-v~--~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ ..+ +... ++ |-.+ .+.+.+.+.... .
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF 81 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3678999987 9999999988888899 899998876654432 222 3321 12 3222 122322222221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 368999999875
No 273
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.39 E-value=0.45 Score=43.67 Aligned_cols=60 Identities=23% Similarity=0.238 Sum_probs=44.9
Q ss_pred HHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcC---CchHHHHHHHcCCcEEEcCC
Q 016507 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSK 254 (388)
Q Consensus 194 ~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~lga~~v~~~~ 254 (388)
.+...+++|.+|+=--+|..|.+.+.+|+..|+ +++.+.. +.+|.++++.+|+.-++...
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 445669999955544459999999999999999 5555433 56888999999997665443
No 274
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.094 Score=47.79 Aligned_cols=78 Identities=21% Similarity=0.318 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcC-----Cc-EEE--cCCCCCCccHHHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-----VT-EFV--NSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg-----a~-~v~--~~~~~~~~~~~~~i~~~~~ 270 (388)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.. ..+. .. .++ |-.+ ...+.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATA 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4679999997 9999999999988999 899998877654332 2221 11 122 3322 1223333333221
Q ss_pred --CCccEEEEccC
Q 016507 271 --GGADYCFECVG 281 (388)
Q Consensus 271 --g~~dvvid~~g 281 (388)
+++|++|.+.|
T Consensus 83 ~~~~~d~li~~ag 95 (276)
T PRK05875 83 WHGRLHGVVHCAG 95 (276)
T ss_pred HcCCCCEEEECCC
Confidence 37899999887
No 275
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.38 E-value=0.13 Score=47.47 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=32.0
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
..+.++||+|+|++|.+++..+...|+++|+++.+++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3567899999999999988888889997799998886
No 276
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.095 Score=47.21 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc---CCcE---EEcCCCCCCccHHHHHHhhcC--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF---GVTE---FVNSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l---ga~~---v~~~~~~~~~~~~~~i~~~~~--g 271 (388)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+..+.+ +... ..|..+ .+.+...+.+... +
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 4678999997 9999998888888899 788888877765444332 3221 223222 1223333333221 3
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 79999999983
No 277
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.35 E-value=0.14 Score=49.18 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=67.4
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHH-HHHHcCCcEEEcCCCCCCccHHHHHHhhcCC
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 271 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g 271 (388)
+.+..+--.+.+|||+|+|-+|..++..+...|+.+|++.-|+.+|.+ +++++|+..+ ..+ ++.+.+.
T Consensus 169 A~~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~-----el~~~l~----- 237 (414)
T COG0373 169 AKRIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE-----ELLEALA----- 237 (414)
T ss_pred HHHHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH-----HHHHhhh-----
Confidence 333333347889999999999999999999999889999998888765 5677885432 211 1222221
Q ss_pred CccEEEEccCCHHH---HHHHHHHhhcCCc-eEEEEcc
Q 016507 272 GADYCFECVGLASL---VQEAYACCRKGWG-KTIVLGV 305 (388)
Q Consensus 272 ~~dvvid~~g~~~~---~~~~~~~l~~~~G-~~v~~g~ 305 (388)
.+|+||.+++.+.. .......+..... -+++++.
T Consensus 238 ~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 238 EADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred hCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 79999999987632 1233333333212 4566665
No 278
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.34 E-value=0.11 Score=45.89 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=48.7
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCCcEE-EcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +.+++..+ .|-.+ .+.+.+.+.+. .+.+|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence 5899987 9999999998888899 899998887776543 34444332 33333 12233333322 23689999886
Q ss_pred C
Q 016507 281 G 281 (388)
Q Consensus 281 g 281 (388)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 5
No 279
>PLN02366 spermidine synthase
Probab=95.34 E-value=0.21 Score=46.39 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=64.8
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-CC-cEEEcCCCC--CCccHHHHHHhhcCCCcc
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-TEFVNSKNC--GDKSVSQIIIDMTDGGAD 274 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga-~~v~~~~~~--~~~~~~~~i~~~~~g~~d 274 (388)
....++|||+|+|. |.++..++++.+..+|.+++.+++-.+.++++ .. ...++.... -..+-.+.+++..++.||
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 35578999998766 66677888887766899999988877777763 21 000100000 002233334433234899
Q ss_pred EEEEccCC----------HHHHHHHHHHhhcCCceEEEEcc
Q 016507 275 YCFECVGL----------ASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 275 vvid~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
+||--... ...++.+.+.|+++ |.++..+.
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~ 207 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE 207 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence 99653322 13367888999997 99876543
No 280
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.33 E-value=0.17 Score=43.88 Aligned_cols=82 Identities=27% Similarity=0.344 Sum_probs=56.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
-.|.+|+|.|.|.+|..+++.+...|+ +|+++++++++.+.+.. +++. .++.++ +.. ...|+++-
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~---------l~~---~~~Dv~vp 91 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE---------IYS---VDADVFAP 91 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh---------hcc---ccCCEEEe
Confidence 357899999999999999999999999 99999988887665544 4653 333211 111 16899997
Q ss_pred ccCCHHHHHHHHHHhhc
Q 016507 279 CVGLASLVQEAYACCRK 295 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l~~ 295 (388)
|......-...++.+..
T Consensus 92 ~A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 92 CALGGVINDDTIPQLKA 108 (200)
T ss_pred cccccccCHHHHHHcCC
Confidence 65544334455566643
No 281
>PRK08643 acetoin reductase; Validated
Probab=95.32 E-value=0.1 Score=46.99 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=49.5
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE-E--EcCCCCCCccHHHHHHhhc--CC
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE-F--VNSKNCGDKSVSQIIIDMT--DG 271 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~i~~~~--~g 271 (388)
+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.. .+... . .|-.+ .+.+.+.+.+.. .+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 468899987 9999999998888899 89999888766543322 23221 1 23322 122333233221 13
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
+.|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999999864
No 282
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.31 E-value=0.1 Score=46.60 Aligned_cols=78 Identities=22% Similarity=0.215 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~-- 270 (388)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+.. .++ |..+ ...+.+.+.++..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999997 9999999998888899 89999887765543322 2221 122 2222 1223333333221
Q ss_pred CCccEEEEccC
Q 016507 271 GGADYCFECVG 281 (388)
Q Consensus 271 g~~dvvid~~g 281 (388)
++.|++|.+.|
T Consensus 79 ~~~d~vi~~ag 89 (250)
T TIGR03206 79 GPVDVLVNNAG 89 (250)
T ss_pred CCCCEEEECCC
Confidence 37899999987
No 283
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.29 E-value=0.21 Score=40.72 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=28.9
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
+|+|+|.|++|...++.+...|..++..+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999889999765
No 284
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.28 E-value=0.11 Score=46.83 Aligned_cols=79 Identities=20% Similarity=0.384 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 270 (388)
++.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+. ..+... . .|-.+ ...+.+.+.+...
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5689999987 9999999998888899 8999998877655433 222221 2 23332 1223222222221
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 378999999874
No 285
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.11 Score=46.69 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCc-EEE--cCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.+|||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+.. +.+ |..+ .....+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 3578999987 9999999999888899 89999987765543322 2321 122 3322 1223333333221
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+.+|+++++.+.
T Consensus 84 ~~id~li~~ag~ 95 (252)
T PRK07035 84 GRLDILVNNAAA 95 (252)
T ss_pred CCCCEEEECCCc
Confidence 368999998873
No 286
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.1 Score=47.01 Aligned_cols=81 Identities=19% Similarity=0.191 Sum_probs=51.4
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHH----HHHHcCCcE---EEcCCCCCCccHHHHHHhhc--
Q 016507 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTE---FVNSKNCGDKSVSQIIIDMT-- 269 (388)
Q Consensus 200 ~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~----~~~~lga~~---v~~~~~~~~~~~~~~i~~~~-- 269 (388)
..+.+++|+|+ |.+|..+++.+...|++.|+++++++++.+ .++..+... ..|..+ ...+.+.+....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35678999997 999999999998899944999988765543 222334322 224333 122332222221
Q ss_pred CCCccEEEEccCC
Q 016507 270 DGGADYCFECVGL 282 (388)
Q Consensus 270 ~g~~dvvid~~g~ 282 (388)
-+++|++|++.|.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 1379999999874
No 287
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.1 Score=46.78 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCc-EE--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ +..+.. .. .|-.+ ...+.+.+.+.. .
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4679999997 9999999988888899 899999887654332 223322 12 23222 122222222221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|+++.+.|.
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 288
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.27 E-value=0.11 Score=47.16 Aligned_cols=80 Identities=24% Similarity=0.274 Sum_probs=48.4
Q ss_pred CCCCEEEEEcc-c--hhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcEE--EcCCCCCCccHHHHHHhhcC
Q 016507 200 EVGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 200 ~~~~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v--~~~~~~~~~~~~~~i~~~~~ 270 (388)
..+.++||+|+ + ++|.+.++.+...|+ +|+..++++...+.++ .+|.... .|-.+ .+...+.+.+...
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~ 82 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKE 82 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHH
Confidence 35678999987 4 799998888878899 8888877642222222 2343332 34333 2333333333222
Q ss_pred --CCccEEEEccCC
Q 016507 271 --GGADYCFECVGL 282 (388)
Q Consensus 271 --g~~dvvid~~g~ 282 (388)
|++|+++++.|.
T Consensus 83 ~~g~iDilVnnag~ 96 (260)
T PRK06603 83 KWGSFDFLLHGMAF 96 (260)
T ss_pred HcCCccEEEEcccc
Confidence 379999998763
No 289
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.26 E-value=0.09 Score=45.54 Aligned_cols=100 Identities=16% Similarity=0.255 Sum_probs=61.8
Q ss_pred HHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc----CCcEEEcCCCCCCccHHHHHHhhc
Q 016507 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 194 ~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~ 269 (388)
.+.....++.+||-+|.|. |..+..+++. |. +|++++.+++-.+.+++. +...+ .... .++.+. .+
T Consensus 23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~- 92 (197)
T PRK11207 23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF- 92 (197)
T ss_pred HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-
Confidence 3444566778999998765 7777777775 77 999999998776665542 22211 1000 111110 11
Q ss_pred CCCccEEEEccC----C----HHHHHHHHHHhhcCCceEEEEc
Q 016507 270 DGGADYCFECVG----L----ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 270 ~g~~dvvid~~g----~----~~~~~~~~~~l~~~~G~~v~~g 304 (388)
.+.||+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 237999987543 1 13367788888997 9865544
No 290
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.28 Score=44.32 Aligned_cols=78 Identities=17% Similarity=0.261 Sum_probs=47.1
Q ss_pred CCCEEEEEcc---chhHHHHHHHHHHcCCcEEEEEcCCc---hHHHHH-HHc-CCc-E--EEcCCCCCCccHHHHHHhhc
Q 016507 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRF-GVT-E--FVNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 201 ~~~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~---~~~~~~-~~l-ga~-~--v~~~~~~~~~~~~~~i~~~~ 269 (388)
.+.++||+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ .++ +.. . ..|-.+ .+...+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4678999986 5999998888888899 888886543 233322 233 211 1 223333 233333333332
Q ss_pred C--CCccEEEEccC
Q 016507 270 D--GGADYCFECVG 281 (388)
Q Consensus 270 ~--g~~dvvid~~g 281 (388)
. |++|+++++.|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 47999999876
No 291
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.12 Score=46.41 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=51.5
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c---CCc---EEEcCCCCCCccHHHHHHhhcC-
Q 016507 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F---GVT---EFVNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 200 ~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~---~v~~~~~~~~~~~~~~i~~~~~- 270 (388)
..+.+|||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ + +.. ...|-.+ .+.+...+.+...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALER 79 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHH
Confidence 35678999987 9999999998888999 89999888766543322 2 322 1223322 1233333333221
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 80 ~g~~d~vi~~ag~ 92 (258)
T PRK07890 80 FGRVDALVNNAFR 92 (258)
T ss_pred cCCccEEEECCcc
Confidence 378999998874
No 292
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.11 Score=46.44 Aligned_cols=79 Identities=22% Similarity=0.210 Sum_probs=49.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-Hc--CCc-EEE--cCCCCCCccHHHHHHhhcC--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF--GVT-EFV--NSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l--ga~-~v~--~~~~~~~~~~~~~i~~~~~--g 271 (388)
++.++||+|+ |.+|...++.+...|+ +|+++.++.++.+... .+ +.. .++ |-.+ ...+.+.+.+... +
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999988777898 8999988876544322 22 221 122 3222 1223333322221 3
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|+++.+.|.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 293
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.12 Score=46.71 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=49.3
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE-E--EcCCCCCCccHHHHHHhhcC--CC
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GG 272 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~~--g~ 272 (388)
.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. ..+... + .|-.+ ...+.+.+.+... ++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG 78 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 57999987 9999999998888898 8999998876544322 223321 1 23222 1233333333221 37
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 294
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.23 E-value=0.096 Score=47.24 Aligned_cols=79 Identities=25% Similarity=0.270 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH---cCCcE---EEcCCCCCCccHHHHHHhhcC--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE---FVNSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~~---v~~~~~~~~~~~~~~i~~~~~--g 271 (388)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++...+...+ .+.+. ..|-.+ .+...+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999998888899 89999887543333333 23322 233333 1223333333221 3
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|+++++.|.
T Consensus 84 ~id~lv~nAg~ 94 (260)
T PRK12823 84 RIDVLINNVGG 94 (260)
T ss_pred CCeEEEECCcc
Confidence 79999999873
No 295
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.23 E-value=0.052 Score=44.68 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=56.2
Q ss_pred EEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC---CCccHHHHHHhhcCCCccEEEEccC
Q 016507 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC---GDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 205 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~---~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
|+|+|+|++|...+..++..|. +|..+.+.+ +.+.+++.|........+. ........ ....+.+|+||-|+=
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877898 899998887 7777776664321111000 00000000 011138999999986
Q ss_pred CHHHHHHHHHHhhc----CCceEEEEcc
Q 016507 282 LASLVQEAYACCRK----GWGKTIVLGV 305 (388)
Q Consensus 282 ~~~~~~~~~~~l~~----~~G~~v~~g~ 305 (388)
... ...+++.+++ + ..++.+.+
T Consensus 77 a~~-~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQ-LEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGG-HHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccc-hHHHHHHHhhccCCC-cEEEEEeC
Confidence 654 4444444444 3 45665544
No 296
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.11 Score=46.84 Aligned_cols=79 Identities=20% Similarity=0.227 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-Hc-----CCc-EE--EcCCCCCCccHHHHHHhhc-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EF--VNSKNCGDKSVSQIIIDMT- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~- 269 (388)
.+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. .+ +.. .+ .|-.+ .+++.+.+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4678999987 9999999998888999 8999988776654332 22 211 11 23322 122333333222
Q ss_pred -CCCccEEEEccCC
Q 016507 270 -DGGADYCFECVGL 282 (388)
Q Consensus 270 -~g~~dvvid~~g~ 282 (388)
.+++|++|++.|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 1379999999873
No 297
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.14 Score=45.59 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+... + .|-.+ .+.+...+.+...
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4568999987 9999999998888899 89999998766544322 22221 1 23222 1233333333221
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
++.|+++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 369999999874
No 298
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.21 E-value=0.16 Score=38.08 Aligned_cols=85 Identities=25% Similarity=0.265 Sum_probs=54.2
Q ss_pred EEEEEccchhHHHHHHHHHHcC---CcEEE-EEcCCchHHHHH-HHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 204 TVVIFGLGSIGLAVAEGARLCG---ATRII-GVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g---~~~Vi-~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
+|.|+|+|.+|.+.+.-+...| . +|+ +..+++++.+.+ +++++.... .+..+.+. ..|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ-----EADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH-----HTSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc-----cCCEEEE
Confidence 5788899999999998888877 5 787 448888887765 456654332 12333332 5799999
Q ss_pred ccCCHHHHHHHHHH---hhcCCceEEEE
Q 016507 279 CVGLASLVQEAYAC---CRKGWGKTIVL 303 (388)
Q Consensus 279 ~~g~~~~~~~~~~~---l~~~~G~~v~~ 303 (388)
|+.... +...++. ..++ ..++.+
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 998765 4444443 3443 455544
No 299
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.20 E-value=0.093 Score=47.67 Aligned_cols=107 Identities=19% Similarity=0.324 Sum_probs=74.2
Q ss_pred hHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCc-E--EEcCCCCCCccH
Q 016507 189 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-E--FVNSKNCGDKSV 261 (388)
Q Consensus 189 a~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~--v~~~~~~~~~~~ 261 (388)
++..+.+.+++++|.+||=+|-|- |.+++.+|+..|+ +|++++-|+++.+.+++ .|.. . +.-.+- .++
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~---rd~ 134 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDY---RDF 134 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccc---ccc
Confidence 444567889999999999998765 6777788888899 99999999998877765 4543 1 221111 111
Q ss_pred HHHHHhhcCCCccEEE-----EccCC---HHHHHHHHHHhhcCCceEEEEccCCCC
Q 016507 262 SQIIIDMTDGGADYCF-----ECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPG 309 (388)
Q Consensus 262 ~~~i~~~~~g~~dvvi-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 309 (388)
.+.||-|+ +.+|. +.-+..+.+.|+++ |++..-......
T Consensus 135 --------~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 135 --------EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred --------ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 12477764 34454 23378899999998 999877664433
No 300
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.14 Score=45.93 Aligned_cols=73 Identities=21% Similarity=0.270 Sum_probs=46.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc-hHHHHHHHcCCcE--EEcCCCCCCccHHHHHHhhcCCCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~~dvv 276 (388)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++ +..+.... +... ..|-.+ . +.+.+.. ++.|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~---~---~~~~~~~-~~iDil 83 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK---E---ESLDKQL-ASLDVL 83 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC---H---HHHHHhc-CCCCEE
Confidence 3679999987 9999999998888999 899888776 22222111 1112 233332 1 2233322 379999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
|++.|.
T Consensus 84 VnnAG~ 89 (245)
T PRK12367 84 ILNHGI 89 (245)
T ss_pred EECCcc
Confidence 999874
No 301
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.17 E-value=0.19 Score=44.98 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
+.+|+|+|+|++|..+++.+...|..+++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 46899999999999999999999998999987654
No 302
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.14 Score=46.26 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c--CCc-EE--EcCCCCCCccHHHHHHhhc-CCC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EF--VNSKNCGDKSVSQIIIDMT-DGG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--ga~-~v--~~~~~~~~~~~~~~i~~~~-~g~ 272 (388)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. + +.. +. .|-.+ ...+.+.+.... .++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence 4678999987 9999999988888899 89999988776654432 2 211 12 23222 122222222111 247
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+++.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 303
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.17 E-value=0.35 Score=37.64 Aligned_cols=93 Identities=19% Similarity=0.111 Sum_probs=61.9
Q ss_pred EEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCHH
Q 016507 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 284 (388)
Q Consensus 205 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~ 284 (388)
|+|.|.|.+|...++.++..+. +|++++.++++.+.++..|...+. -+. .-.+.+++..-..++.++-+++.+.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-ccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999998666 899999999999999988865443 221 2233444442238999998888775
Q ss_pred HHHH---HHHHhhcCCceEEEEc
Q 016507 285 LVQE---AYACCRKGWGKTIVLG 304 (388)
Q Consensus 285 ~~~~---~~~~l~~~~G~~v~~g 304 (388)
.-.. ..+.+.+. .+++...
T Consensus 75 ~n~~~~~~~r~~~~~-~~ii~~~ 96 (116)
T PF02254_consen 75 ENLLIALLARELNPD-IRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEEE
T ss_pred HHHHHHHHHHHHCCC-CeEEEEE
Confidence 3223 33334443 5555443
No 304
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.12 Score=45.97 Aligned_cols=81 Identities=23% Similarity=0.288 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCC-c---EEEcCCCCCCcc---HHHHHHhh
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T---EFVNSKNCGDKS---VSQIIIDM 268 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga-~---~v~~~~~~~~~~---~~~~i~~~ 268 (388)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+. + .-.|..+..... +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4678999987 9999999988888899 8999999887654332 1121 1 112321100012 23333333
Q ss_pred cCCCccEEEEccCC
Q 016507 269 TDGGADYCFECVGL 282 (388)
Q Consensus 269 ~~g~~dvvid~~g~ 282 (388)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999999884
No 305
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.15 E-value=0.11 Score=46.81 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=48.4
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-H----cCC--cEEE--cCCCCCCccHHHHHHhhc--
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGV--TEFV--NSKNCGDKSVSQIIIDMT-- 269 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~----lga--~~v~--~~~~~~~~~~~~~i~~~~-- 269 (388)
+.+|||+|+ |.+|...++.+...|+ +|+.++++..+.+.+. . .+. -+.+ |-.+ .......+.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS--EQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC--HHHHHHHHHHHHHH
Confidence 468999987 9999999988888899 8999988776543322 1 121 1122 3222 122222222221
Q ss_pred CCCccEEEEccCC
Q 016507 270 DGGADYCFECVGL 282 (388)
Q Consensus 270 ~g~~dvvid~~g~ 282 (388)
.++.|+++++.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (259)
T PRK12384 79 FGRVDLLVYNAGI 91 (259)
T ss_pred cCCCCEEEECCCc
Confidence 1378999998873
No 306
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.058 Score=49.02 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=50.0
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEEE
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYCF 277 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~--g~~dvvi 277 (388)
+.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+... ++.. ..|..+ .+.+.+.+.+... +++|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence 468999987 9999999988888899 8999988766543221 2222 233333 2334443433322 3799999
Q ss_pred EccCC
Q 016507 278 ECVGL 282 (388)
Q Consensus 278 d~~g~ 282 (388)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99985
No 307
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.12 E-value=0.071 Score=46.29 Aligned_cols=35 Identities=37% Similarity=0.441 Sum_probs=31.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999889999887
No 308
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.13 Score=47.02 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-E--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ +..+... . .|-.+ ..++.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999998888999 899888877655432 2234322 1 23222 122332222221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 378999998873
No 309
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.14 Score=45.67 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=47.5
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcC--CcE-EEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg--a~~-v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+...+ +.. ..|-.+ .+++.+.+.+. ....|+++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-ccCCCEEEE
Confidence 46899987 9999998888878899 8999999888776655433 211 233333 13333333332 224677666
Q ss_pred ccC
Q 016507 279 CVG 281 (388)
Q Consensus 279 ~~g 281 (388)
+.|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 554
No 310
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.15 Score=45.91 Aligned_cols=77 Identities=19% Similarity=0.219 Sum_probs=51.1
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cC-Cc-E--EEcCCCCCCccHHHHHHhhc---CCCc
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-VT-E--FVNSKNCGDKSVSQIIIDMT---DGGA 273 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg-a~-~--v~~~~~~~~~~~~~~i~~~~---~g~~ 273 (388)
.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++ .. + ..|-.+ ...+.+.+.+.. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47999987 9999999998888899 89999888877655433 32 11 1 234333 123333333321 3479
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999875
No 311
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.09 E-value=0.13 Score=46.97 Aligned_cols=102 Identities=17% Similarity=0.254 Sum_probs=63.4
Q ss_pred CCCEEEEEcc---chhHHHHHHHHHHcCCcEEEEEcCCch---HHHH-HHHcCCcEE--EcCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEI-GKRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~---~~~~-~~~lga~~v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.++||+|+ +++|.++++.+-..|+ +|+.++++++ +.+. .++++.... .|-.+ .+...+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4678999986 4899999988888899 8988887743 2222 233443322 34333 1233333333322
Q ss_pred -CCccEEEEccCCH-----------------------------HHHHHHHHHhhcCCceEEEEccC
Q 016507 271 -GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 271 -g~~dvvid~~g~~-----------------------------~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
|++|+++++.|.. ...+..+..+..+ |+++.++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 4799999998741 0124455566676 999988764
No 312
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.08 E-value=0.18 Score=47.53 Aligned_cols=36 Identities=28% Similarity=0.294 Sum_probs=31.6
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
.+.+|+|+|+|++|..+++.+...|..+++.+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346799999999999999999999998999998764
No 313
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.07 E-value=0.31 Score=43.23 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=30.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
..+|+|+|.|++|..+++.+...|..+++.+|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 56899999999999999999999998998886544
No 314
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.13 Score=47.00 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=49.9
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCC--c-EE--EcCCCCCCccHHHHHHhhcC-
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV--T-EF--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~-~v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.. .+. . .+ .|..+ .+.+.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 568999997 9999999998888899 89999887766544322 221 1 12 23333 123333 333322
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999999874
No 315
>PLN00203 glutamyl-tRNA reductase
Probab=95.07 E-value=0.17 Score=50.40 Aligned_cols=74 Identities=18% Similarity=0.272 Sum_probs=52.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcC-CcE-EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VTE-FVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lg-a~~-v~~~~~~~~~~~~~~i~~~~~g~~dvvi 277 (388)
.+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. .++ ... +... .+..+.+ .+.|+||
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~-----~dl~~al-----~~aDVVI 334 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL-----DEMLACA-----AEADVVF 334 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH-----hhHHHHH-----hcCCEEE
Confidence 3689999999999999999999899878999999988876554 353 221 1111 1122222 2789999
Q ss_pred EccCCHH
Q 016507 278 ECVGLAS 284 (388)
Q Consensus 278 d~~g~~~ 284 (388)
.|++.+.
T Consensus 335 sAT~s~~ 341 (519)
T PLN00203 335 TSTSSET 341 (519)
T ss_pred EccCCCC
Confidence 9987653
No 316
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.07 E-value=0.14 Score=46.76 Aligned_cols=80 Identities=19% Similarity=0.342 Sum_probs=48.8
Q ss_pred CCCCCEEEEEcc---chhHHHHHHHHHHcCCcEEEEEcCCch---HHHH-HHHcCCcEE--EcCCCCCCccHHHHHHhhc
Q 016507 199 VEVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEI-GKRFGVTEF--VNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 199 ~~~~~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~---~~~~-~~~lga~~v--~~~~~~~~~~~~~~i~~~~ 269 (388)
+..+.++||+|+ +++|.+.++.+...|+ +|+.+.+++. +.+. .++++.... .|-.+ .++..+.+.+..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~ 83 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLE 83 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHH
Confidence 445788999986 5899999988888999 8888876542 2222 233453222 23222 123333333322
Q ss_pred C--CCccEEEEccC
Q 016507 270 D--GGADYCFECVG 281 (388)
Q Consensus 270 ~--g~~dvvid~~g 281 (388)
. ++.|+++++.|
T Consensus 84 ~~~g~iD~lv~nAG 97 (272)
T PRK08159 84 KKWGKLDFVVHAIG 97 (272)
T ss_pred HhcCCCcEEEECCc
Confidence 2 37999999876
No 317
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.05 E-value=0.15 Score=46.18 Aligned_cols=80 Identities=21% Similarity=0.336 Sum_probs=48.5
Q ss_pred CCCCEEEEEcc---chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcEE--EcCCCCCCccHHHHHHhhcC
Q 016507 200 EVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 200 ~~~~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v--~~~~~~~~~~~~~~i~~~~~ 270 (388)
..+.++||+|+ +++|.+.++.+-..|+ +|+.+.+.+...+.+++ ++.... .|-.+ .++..+.+.+...
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~ 80 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGK 80 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHH
Confidence 35678999984 5899999888888999 88887665433333332 232222 23322 2333333333222
Q ss_pred --CCccEEEEccCC
Q 016507 271 --GGADYCFECVGL 282 (388)
Q Consensus 271 --g~~dvvid~~g~ 282 (388)
+++|+++++.|.
T Consensus 81 ~~g~iD~lVnnAG~ 94 (261)
T PRK08690 81 HWDGLDGLVHSIGF 94 (261)
T ss_pred HhCCCcEEEECCcc
Confidence 379999998864
No 318
>PRK00811 spermidine synthase; Provisional
Probab=95.05 E-value=0.18 Score=46.34 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=63.7
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-C-----C--c---EEEcCCCCCCccHHHHHHhh
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G-----V--T---EFVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-g-----a--~---~v~~~~~~~~~~~~~~i~~~ 268 (388)
...++||++|+|. |..+..+++..+..+|.+++.+++-.+.+++. . . + .++. .+..+.+.+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567999998766 67777778877776999999999888887763 1 1 1 1221 223333433
Q ss_pred cCCCccEEEEccCC----------HHHHHHHHHHhhcCCceEEEEc
Q 016507 269 TDGGADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 269 ~~g~~dvvid~~g~----------~~~~~~~~~~l~~~~G~~v~~g 304 (388)
..+.||+||--... ...++.+.+.|+++ |.++...
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 34489999754321 22256788999997 9988754
No 319
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.13 Score=46.87 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=50.3
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCc-EE--EcCCCCCCccHHHHHHhhc--CCCcc
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMT--DGGAD 274 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~~d 274 (388)
+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.. ++.. .. .|..+ .+.+.+.+.+.. .+++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 458999987 9999999888877898 89999988877655443 2211 12 23222 122333233221 13789
Q ss_pred EEEEccCC
Q 016507 275 YCFECVGL 282 (388)
Q Consensus 275 vvid~~g~ 282 (388)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999874
No 320
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.03 E-value=0.17 Score=44.88 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=50.1
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchH-HHHHHHcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~--g~~dvv 276 (388)
+.++||+|+ |.+|...++.+...|+ +|++++++++. .+.++..++.. ..|-.+ ...+.+.+.+... +++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 458999987 9999999998888899 89988887643 23344455432 123222 1233333333322 369999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 321
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.03 E-value=0.16 Score=47.38 Aligned_cols=88 Identities=17% Similarity=0.195 Sum_probs=57.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.+ ++..... . .++.+.+. ..|+|+.+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~--~---~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAG--R---EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecc--c---ccHHHHHh-----cCCEEEECC
Confidence 57899999999999999999999999 9999987554321 2221110 1 22333222 567887777
Q ss_pred CCHHHH-----HHHHHHhhcCCceEEEEcc
Q 016507 281 GLASLV-----QEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 281 g~~~~~-----~~~~~~l~~~~G~~v~~g~ 305 (388)
+..... ...+..++++ ..+|.+|.
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 644322 2456677776 77777764
No 322
>PRK08264 short chain dehydrogenase; Validated
Probab=95.03 E-value=0.11 Score=46.24 Aligned_cols=75 Identities=19% Similarity=0.205 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc-EE--EcCCCCCCccHHHHHHhhcCCCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTDGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~g~~dvv 276 (388)
.+.++||+|+ |.+|..+++.+...|+++|+++++++++.+. .+.. .+ .|-.+ .+.+.+.+... +.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAA--SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhc--CCCCEE
Confidence 4678999987 9999999998888898678988887765442 2221 12 23322 12233222221 268999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999886
No 323
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=95.02 E-value=0.02 Score=30.57 Aligned_cols=22 Identities=18% Similarity=0.271 Sum_probs=15.8
Q ss_pred eeeeeecCCCCCeEEEEeecCCC
Q 016507 17 CRAAIATAPGEPLVIDEVIVDPP 39 (388)
Q Consensus 17 ~ka~~~~~~~~~~~~~~~~~p~~ 39 (388)
|||+++.++++ .+++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 79999999998 99999998865
No 324
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.01 E-value=0.14 Score=46.09 Aligned_cols=79 Identities=23% Similarity=0.315 Sum_probs=49.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchH--HHHHHHcCCcE---EEcCCCCCCccHHHHHHhhc--CCC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE---FVNSKNCGDKSVSQIIIDMT--DGG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~ 272 (388)
.+.++||+|+ +.+|.++++.+...|+ +|+++++++.. .+.++..+.+. ..|-.+ .++..+.+.+.. .++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 4788999987 9999999998888999 88888765421 22333444322 233333 123333333321 237
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999998873
No 325
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.14 Score=46.74 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=50.3
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcE---EEcCCCCCCccHHHHHHhhcC--CCccE
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE---FVNSKNCGDKSVSQIIIDMTD--GGADY 275 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~---v~~~~~~~~~~~~~~i~~~~~--g~~dv 275 (388)
.++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++ ++... ..|..+ .+.+.+.+.+... +++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 47999987 9999999988888898 89999988877665543 22211 123332 1223333333221 37899
Q ss_pred EEEccCC
Q 016507 276 CFECVGL 282 (388)
Q Consensus 276 vid~~g~ 282 (388)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998874
No 326
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.99 E-value=0.33 Score=44.50 Aligned_cols=86 Identities=19% Similarity=0.285 Sum_probs=57.0
Q ss_pred EEEEEccchhHHHH-HHHHHHcCCcEEEEE-cCCchH--HHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 204 TVVIFGLGSIGLAV-AEGARLCGATRIIGV-DVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 204 ~VlI~Gag~vG~~a-i~la~~~g~~~Vi~~-~~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
+|.|+|+|.+|... ..+.+..+. ++.++ +.++++ +++++++|....++ ++.+.+.. ..+|+|+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~~---~dIDaV~ia 71 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLAN---PDIDIVFDA 71 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhcC---CCCCEEEEC
Confidence 68899999999855 556665567 55554 445543 46677788764432 22222221 279999999
Q ss_pred cCCHHHHHHHHHHhhcCCceEE
Q 016507 280 VGLASLVQEAYACCRKGWGKTI 301 (388)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~~v 301 (388)
++...+.+.+..++..| -+++
T Consensus 72 Tp~~~H~e~a~~al~aG-k~VI 92 (285)
T TIGR03215 72 TSAKAHARHARLLAELG-KIVI 92 (285)
T ss_pred CCcHHHHHHHHHHHHcC-CEEE
Confidence 99998788888887774 4443
No 327
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.99 E-value=0.16 Score=45.80 Aligned_cols=79 Identities=25% Similarity=0.390 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcCCcE-E--EcCCCCCCccHHHHHHhhc--CCCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE-F--VNSKNCGDKSVSQIIIDMT--DGGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~~ 273 (388)
.+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. .++... . .|-.+ .....+.+.+.. .+++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 3578999987 9999999998888899 8999998887665433 333211 1 23222 123333333321 1379
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|+++.+.+.
T Consensus 82 d~li~~ag~ 90 (257)
T PRK07067 82 DILFNNAAL 90 (257)
T ss_pred CEEEECCCc
Confidence 999998763
No 328
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.15 Score=47.65 Aligned_cols=79 Identities=18% Similarity=0.175 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHc-----CCc-E--EEcCCCCCCccHHHHHHhhc-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-E--FVNSKNCGDKSVSQIIIDMT- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l-----ga~-~--v~~~~~~~~~~~~~~i~~~~- 269 (388)
.+.+++|+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ..+ +.. . ..|-.+ .....+.+.++.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999997 9999999988888899 899998887765432 222 111 1 123333 122222222222
Q ss_pred -CCCccEEEEccCC
Q 016507 270 -DGGADYCFECVGL 282 (388)
Q Consensus 270 -~g~~dvvid~~g~ 282 (388)
.++.|++|++.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 1378999998773
No 329
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.16 Score=45.76 Aligned_cols=79 Identities=16% Similarity=0.232 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch-H-HHH---HHHcCCcE-E--EcCCCCCCccHHHHHHhhc--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-K-FEI---GKRFGVTE-F--VNSKNCGDKSVSQIIIDMT-- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~-~~~---~~~lga~~-v--~~~~~~~~~~~~~~i~~~~-- 269 (388)
.+.++||+|+ |.+|.++++.+...|+ +|++++++++ . .+. ++..+... . .|-.+ ...+.+.+.+..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999987 9999999998888999 8888887653 2 222 22233221 2 23222 123333333322
Q ss_pred CCCccEEEEccCC
Q 016507 270 DGGADYCFECVGL 282 (388)
Q Consensus 270 ~g~~dvvid~~g~ 282 (388)
.++.|++|.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 1378999999874
No 330
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.98 E-value=0.15 Score=45.82 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-H---cCCcE---EEcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVTE---FVNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~---lga~~---v~~~~~~~~~~~~~~i~~~~--~ 270 (388)
++.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. . .+... ..|-.+ ...+.+.+.+.. .
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4578999987 9999999998888899 8999988877654332 2 23221 223332 122333332221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.+.
T Consensus 80 ~~~d~vi~~a~~ 91 (258)
T PRK12429 80 GGVDILVNNAGI 91 (258)
T ss_pred CCCCEEEECCCC
Confidence 379999998873
No 331
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.97 E-value=0.065 Score=47.96 Aligned_cols=107 Identities=17% Similarity=0.255 Sum_probs=65.2
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHH----cCCcE-E-EcCCCCCCccHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTE-F-VNSKNCGDKSVSQII 265 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~-v-~~~~~~~~~~~~~~i 265 (388)
+...+++.||++||=-|.|+ |.++..+++..| -.+|+..+..+++.+.+++ +|... + +..++.....+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 55678999999999987655 677777777665 3389999999998877664 45532 2 22222101112
Q ss_pred HhhcCCCccEEEEccCCH-HHHHHHHHHh-hcCCceEEEEcc
Q 016507 266 IDMTDGGADYCFECVGLA-SLVQEAYACC-RKGWGKTIVLGV 305 (388)
Q Consensus 266 ~~~~~g~~dvvid~~g~~-~~~~~~~~~l-~~~~G~~v~~g~ 305 (388)
.+-....+|.||==.+.+ ..+..+.+.| +++ |+++.+.-
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 111112688885544444 4588999999 887 99988853
No 332
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.97 E-value=0.17 Score=45.46 Aligned_cols=79 Identities=27% Similarity=0.406 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HH---cCCcE-E--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FGVTE-F--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~---lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ .+ .+... . .|-.+ ...+.+.+.+.. .
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence 4678999987 9999999998888899 899999887654432 22 23221 2 23322 122333332221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|+++.+.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 379999999874
No 333
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.97 E-value=0.15 Score=46.57 Aligned_cols=78 Identities=26% Similarity=0.274 Sum_probs=49.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-H---HcCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-K---RFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~---~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ . ..+... . .|-.+ ...+.+.+.+...
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 9999999998888999 899998877554332 2 223221 1 22222 1223333332221
Q ss_pred CCccEEEEccC
Q 016507 271 GGADYCFECVG 281 (388)
Q Consensus 271 g~~dvvid~~g 281 (388)
+++|++|.+.|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 37999999987
No 334
>PRK08589 short chain dehydrogenase; Validated
Probab=94.96 E-value=0.14 Score=46.72 Aligned_cols=79 Identities=24% Similarity=0.312 Sum_probs=49.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc---CCc---EEEcCCCCCCccHHHHHHhhc--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF---GVT---EFVNSKNCGDKSVSQIIIDMT--DG 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l---ga~---~v~~~~~~~~~~~~~~i~~~~--~g 271 (388)
.+.++||+|+ +.+|.+.++.+...|+ +|++++++++..+.+.++ +.. ...|-.+ .....+.+.+.. .+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999988888899 899998874333333332 321 1233333 122333333322 13
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
+.|++|++.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 78999998864
No 335
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.15 Score=47.35 Aligned_cols=79 Identities=18% Similarity=0.200 Sum_probs=49.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHc-----CCc-EE--EcCCCCCCccHHHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EF--VNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~~ 270 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+ +.+ +.. .. .|-.+ .+.+.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 91 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALRA 91 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHh
Confidence 5678999987 9999999988888899 898888877654322 111 111 11 23332 1223333333221
Q ss_pred --CCccEEEEccCC
Q 016507 271 --GGADYCFECVGL 282 (388)
Q Consensus 271 --g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 92 ~~~~iD~li~nAg~ 105 (306)
T PRK06197 92 AYPRIDLLINNAGV 105 (306)
T ss_pred hCCCCCEEEECCcc
Confidence 379999998873
No 336
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.95 E-value=0.15 Score=45.96 Aligned_cols=79 Identities=16% Similarity=0.237 Sum_probs=49.0
Q ss_pred CCCEEEEEccc---hhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc--EE--EcCCCCCCccHHHHHHhhcC--C
Q 016507 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EF--VNSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 201 ~~~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~--~v--~~~~~~~~~~~~~~i~~~~~--g 271 (388)
.+.++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++... +. .|-.+ .++..+.+.+... +
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 57889999874 899999888888899 899888775434444443211 11 23222 1223333332221 4
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
.+|+++++.|.
T Consensus 83 ~iD~lv~nAg~ 93 (252)
T PRK06079 83 KIDGIVHAIAY 93 (252)
T ss_pred CCCEEEEcccc
Confidence 79999998873
No 337
>PRK07832 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.14 Score=46.63 Aligned_cols=76 Identities=20% Similarity=0.270 Sum_probs=48.1
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE----EEcCCCCCCccHHHHHHhhc--CCC
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE----FVNSKNCGDKSVSQIIIDMT--DGG 272 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~----v~~~~~~~~~~~~~~i~~~~--~g~ 272 (388)
++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... ..|-.+ .+.+.+.+.+.. .++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899987 9999999998888899 899988877654432 2233321 234333 122222222221 137
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999974
No 338
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.94 E-value=0.28 Score=47.17 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=31.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999887
No 339
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.94 E-value=0.6 Score=36.48 Aligned_cols=86 Identities=20% Similarity=0.272 Sum_probs=59.5
Q ss_pred EEEEEccchhHHHHHHHHHHc--CCcEEE-EEcCCchHHHH-HHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 204 TVVIFGLGSIGLAVAEGARLC--GATRII-GVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~--g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
+|.|+|.|.+|......++.. +. +++ +.++++++.+. .+++|.. .+ .++.+.+... .+|+|+-+
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~~---~~D~V~I~ 69 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLADE---DVDAVIIA 69 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHHT---TESEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHhh---cCCEEEEe
Confidence 588999999998887666544 45 555 55666666654 5567877 43 2344444332 79999999
Q ss_pred cCCHHHHHHHHHHhhcCCceEEEE
Q 016507 280 VGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
+......+.+..++.. |.-+.+
T Consensus 70 tp~~~h~~~~~~~l~~--g~~v~~ 91 (120)
T PF01408_consen 70 TPPSSHAEIAKKALEA--GKHVLV 91 (120)
T ss_dssp SSGGGHHHHHHHHHHT--TSEEEE
T ss_pred cCCcchHHHHHHHHHc--CCEEEE
Confidence 9998878888888887 455555
No 340
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.15 Score=46.04 Aligned_cols=77 Identities=23% Similarity=0.293 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c----CCc-EE--EcCCCCCCccHHHHHHhhcCC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EF--VNSKNCGDKSVSQIIIDMTDG 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v--~~~~~~~~~~~~~~i~~~~~g 271 (388)
.+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ + +.. .+ .|-.+ ...+.+.+.+. +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEA--G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHh--C
Confidence 4689999987 9999999998888899 99999888776544321 2 322 12 23222 12233333222 4
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|++|++.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 341
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.93 E-value=0.23 Score=45.34 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=57.6
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcC---CcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VTEFVNSKNCGDKSVSQIIIDMTDGGAD 274 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg---a~~v~~~~~~~~~~~~~~i~~~~~g~~d 274 (388)
...+.+++|+|+|++|.+++..+...|+ +|+++.+++++.+.+ +.+. ....+. +.+ .....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~--------~~~----~~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS--------MDE----LPLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec--------hhh----hcccCcc
Confidence 3457899999999999999888888898 899998887765433 3332 111211 111 1112689
Q ss_pred EEEEccCCHHH--H---HHHHHHhhcCCceEEEEc
Q 016507 275 YCFECVGLASL--V---QEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 275 vvid~~g~~~~--~---~~~~~~l~~~~G~~v~~g 304 (388)
+||+|++.... . ......++++ ..++.+.
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~ 214 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMV 214 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEec
Confidence 99999986420 1 1123456664 5666664
No 342
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.92 E-value=0.19 Score=47.40 Aligned_cols=36 Identities=31% Similarity=0.306 Sum_probs=31.6
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
...+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 346799999999999999999999998999998763
No 343
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.17 Score=45.60 Aligned_cols=78 Identities=19% Similarity=0.201 Sum_probs=49.8
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cC----CcE-EEcCCCCCCccHHHHHHhhcC--CC
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG----VTE-FVNSKNCGDKSVSQIIIDMTD--GG 272 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg----a~~-v~~~~~~~~~~~~~~i~~~~~--g~ 272 (388)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ +. +.. ..|-.+ .+.+.+.+.+... +.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 358999987 9999999988888899 89999988776654332 22 111 123332 1233333333222 36
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+++.+.|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 344
>PRK09186 flagellin modification protein A; Provisional
Probab=94.90 E-value=0.15 Score=45.79 Aligned_cols=78 Identities=21% Similarity=0.320 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHc----CCc---E-EEcCCCCCCccHHHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVT---E-FVNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l----ga~---~-v~~~~~~~~~~~~~~i~~~~~ 270 (388)
.+.+|||+|+ |.+|...+..+...|+ +|+++.+++++.+.+ .++ +.. . ..|-.+ ...+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 4678999987 9999999998888899 899998887665433 222 221 1 223333 1233333333221
Q ss_pred --CCccEEEEccC
Q 016507 271 --GGADYCFECVG 281 (388)
Q Consensus 271 --g~~dvvid~~g 281 (388)
+++|++|++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 36899999885
No 345
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.89 E-value=0.21 Score=43.82 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=31.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34679999999999999999999999889999877
No 346
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.87 E-value=0.28 Score=44.02 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=31.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
...+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 347899999999999999999999998999887654
No 347
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.86 E-value=0.13 Score=42.78 Aligned_cols=79 Identities=25% Similarity=0.291 Sum_probs=47.1
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCC--chHHH-HHH---HcCCcE-EEcCCCCCCccHHHHHHhhc--CCCc
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFE-IGK---RFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGA 273 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~--~~~~~-~~~---~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~~ 273 (388)
++||+|+ +++|...++.+-..|..+|+.+.++ .++.+ ++. ..+... ++..+-.+.+.+...+.+.. .+..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l 81 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL 81 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899987 9999998887777777688888887 33333 322 234322 22211111233333333332 2379
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (167)
T PF00106_consen 82 DILINNAGI 90 (167)
T ss_dssp SEEEEECSC
T ss_pred ccccccccc
Confidence 999998885
No 348
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.85 E-value=0.16 Score=45.39 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHH----HHHcCCcE-EE--cCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~lga~~-v~--~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.+|||+|+ |.+|...+..+...|+ +|++++++.++.+. ++..+... ++ |-.+ ...+.+.+.+...
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 4678999997 9999999988888899 89999888654432 22223221 22 2222 1223333322221
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.+.
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 378999998864
No 349
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.17 Score=45.69 Aligned_cols=79 Identities=24% Similarity=0.299 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH---cCCcE-E--EcCCCCCCccHHHHHHhhc--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE-F--VNSKNCGDKSVSQIIIDMT--DG 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~~-v--~~~~~~~~~~~~~~i~~~~--~g 271 (388)
.+.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+.. .+... . .|-.+ ..++.+.+.+.. .+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999998888899 89999887654333332 23221 1 22222 122222222221 13
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
+.|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 78999998883
No 350
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=94.84 E-value=0.9 Score=41.33 Aligned_cols=83 Identities=17% Similarity=0.239 Sum_probs=55.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHc----CC------cEEEEEcCCc-----------hHHHHHHHcCCcEEEcCCCCCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLC----GA------TRIIGVDVIS-----------EKFEIGKRFGVTEFVNSKNCGDK 259 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~----g~------~~Vi~~~~~~-----------~~~~~~~~lga~~v~~~~~~~~~ 259 (388)
.+.+|+|+|+|+.|...+.+.... |+ ++++.+|+.. .+..+++.... ... .
T Consensus 24 ~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~-----~~~---~ 95 (279)
T cd05312 24 SDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEE-----KEG---K 95 (279)
T ss_pred hhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCc-----ccC---C
Confidence 567999999999988888777654 87 5888887652 23344433211 111 4
Q ss_pred cHHHHHHhhcCCCccEEEEccCCH-HHHHHHHHHhh
Q 016507 260 SVSQIIIDMTDGGADYCFECVGLA-SLVQEAYACCR 294 (388)
Q Consensus 260 ~~~~~i~~~~~g~~dvvid~~g~~-~~~~~~~~~l~ 294 (388)
++.+.++.. ++|+.|-+++.. .--++.++.|.
T Consensus 96 ~L~e~i~~v---~ptvlIG~S~~~g~ft~evv~~Ma 128 (279)
T cd05312 96 SLLEVVKAV---KPTVLIGLSGVGGAFTEEVVRAMA 128 (279)
T ss_pred CHHHHHHhc---CCCEEEEeCCCCCCCCHHHHHHHH
Confidence 677777766 899999988633 22457777776
No 351
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.84 E-value=0.26 Score=43.68 Aligned_cols=75 Identities=19% Similarity=0.232 Sum_probs=55.1
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH--cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~--lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
+++|+|+|.+|...++.+...|. .|++++.++++.+...+ +... ++.-+. .-.+.+++.--..+|+++-+++
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 58899999999999999999999 99999999998776333 4443 333222 2234455542238999999999
Q ss_pred CHH
Q 016507 282 LAS 284 (388)
Q Consensus 282 ~~~ 284 (388)
.+.
T Consensus 76 ~d~ 78 (225)
T COG0569 76 NDE 78 (225)
T ss_pred CCH
Confidence 865
No 352
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.84 E-value=0.37 Score=38.27 Aligned_cols=91 Identities=22% Similarity=0.305 Sum_probs=49.7
Q ss_pred EEEEEcc-chhHHHHHHHHHH-cCCcEEEEEcCCch---HHHHHHHcCCc--EEEcCCCCCCccHHHHHHhhcCCCccEE
Q 016507 204 TVVIFGL-GSIGLAVAEGARL-CGATRIIGVDVISE---KFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYC 276 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~-~g~~~Vi~~~~~~~---~~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~~dvv 276 (388)
+|+|+|+ |-+|..+++.+.. .+.+-+-++++.++ ..+.-.-.|.. .+.-+ .++.+ ... .+|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~~l~~----~~~-~~DVv 71 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----DDLEE----LLE-EADVV 71 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-HHH----HTT-H-SEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc-----hhHHH----hcc-cCCEE
Confidence 6899998 9999999999987 67734555555441 11111111111 00000 12222 222 38999
Q ss_pred EEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 277 FECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 277 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
||++. +......++.+... |.-+.+|.+
T Consensus 72 IDfT~-p~~~~~~~~~~~~~-g~~~ViGTT 99 (124)
T PF01113_consen 72 IDFTN-PDAVYDNLEYALKH-GVPLVIGTT 99 (124)
T ss_dssp EEES--HHHHHHHHHHHHHH-T-EEEEE-S
T ss_pred EEcCC-hHHhHHHHHHHHhC-CCCEEEECC
Confidence 99994 44466666666664 787788764
No 353
>PRK08862 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.18 Score=44.71 Aligned_cols=78 Identities=12% Similarity=0.077 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.++||+|+ +++|.+.+..+...|+ +|+.+.+++++.+.+. ..+.+. . .|-.+ .+...+.+.+...
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF 80 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 8999998888888899 8999988887654332 234322 2 23222 1333323332221
Q ss_pred C-CccEEEEccC
Q 016507 271 G-GADYCFECVG 281 (388)
Q Consensus 271 g-~~dvvid~~g 281 (388)
+ .+|++|.+.|
T Consensus 81 g~~iD~li~nag 92 (227)
T PRK08862 81 NRAPDVLVNNWT 92 (227)
T ss_pred CCCCCEEEECCc
Confidence 3 7999999986
No 354
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.82 E-value=0.31 Score=45.56 Aligned_cols=94 Identities=12% Similarity=0.014 Sum_probs=60.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HcCCcEEEEEcCCchHHHHH-HHc---CCcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMTDGGAD 274 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~-~~l---ga~~v~~~~~~~~~~~~~~i~~~~~g~~d 274 (388)
....+|+|+|+|..|...+..+. ..+..+|.+..+++++.+.+ ..+ |.. +... .+..+.+ .+.|
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av-----~~aD 191 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAV-----RQAD 191 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHH-----hcCC
Confidence 45678999999999999876444 46767999999998876544 333 322 1111 1223333 2789
Q ss_pred EEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 275 YCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 275 vvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
+|+.|+++...+- --+.++++ -.+..+|..
T Consensus 192 IVi~aT~s~~pvl-~~~~l~~g-~~i~~ig~~ 221 (314)
T PRK06141 192 IISCATLSTEPLV-RGEWLKPG-THLDLVGNF 221 (314)
T ss_pred EEEEeeCCCCCEe-cHHHcCCC-CEEEeeCCC
Confidence 9999888764211 12567886 666667653
No 355
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.82 E-value=0.17 Score=47.48 Aligned_cols=78 Identities=21% Similarity=0.198 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcC---Cc-EE--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VT-EF--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg---a~-~v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ..+. .. .+ .|-.+ ...+.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999987 9999999988888898 899998887765433 2332 11 11 23332 122222232221 2
Q ss_pred CCccEEEEccC
Q 016507 271 GGADYCFECVG 281 (388)
Q Consensus 271 g~~dvvid~~g 281 (388)
+++|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999887
No 356
>PRK12937 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.61 Score=41.41 Aligned_cols=79 Identities=16% Similarity=0.111 Sum_probs=46.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch-HHH----HHHHcCCc-EEE--cCCCCCCccHHHHHHhhc--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMT-- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~-- 269 (388)
++.++||+|+ |.+|...++.+...|+ +|+.+.++.+ ..+ .+...+.. ..+ |-.+ ...+.+.+.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD--AAAVTRLFDAAETA 80 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHH
Confidence 4678999987 9999999999988999 7777655432 221 22223322 122 2222 122333333221
Q ss_pred CCCccEEEEccCC
Q 016507 270 DGGADYCFECVGL 282 (388)
Q Consensus 270 ~g~~dvvid~~g~ 282 (388)
.++.|++|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (245)
T PRK12937 81 FGRIDVLVNNAGV 93 (245)
T ss_pred cCCCCEEEECCCC
Confidence 1379999998874
No 357
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.80 E-value=0.6 Score=41.53 Aligned_cols=107 Identities=21% Similarity=0.322 Sum_probs=72.8
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcEEEcCCCCCCccHHHHHHhh
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~ 268 (388)
+.......+|++||=+|+|. |-.|+.+++..|-.+|+++|.+++-++.+++ .|... +..-. .-++.+. +
T Consensus 43 ~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~----~dAe~LP-f 115 (238)
T COG2226 43 LISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV----GDAENLP-F 115 (238)
T ss_pred HHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE----echhhCC-C
Confidence 44555667899999986654 8899999998875599999999988877764 22221 11000 1122222 2
Q ss_pred cCCCccEEEEccCC------HHHHHHHHHHhhcCCceEEEEccCC
Q 016507 269 TDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 269 ~~g~~dvvid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
-..-||+|.-+.|- +..+.++.+.++|+ |+++.+....
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 22279999776663 24588999999998 9999887643
No 358
>PLN02253 xanthoxin dehydrogenase
Probab=94.80 E-value=0.15 Score=46.58 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=49.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHH-HHHcCC--c-E--EEcCCCCCCccHHHHHHhhcC--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGV--T-E--FVNSKNCGDKSVSQIIIDMTD--G 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga--~-~--v~~~~~~~~~~~~~~i~~~~~--g 271 (388)
.+.++||+|+ |.+|.+.++.+...|+ +|++++++++..+. ...++. . . ..|-.+ .+.+.+.+..... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 3678999987 9999998888888899 89999887655433 233321 1 1 123333 1223333332221 3
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|++|++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 359
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.19 Score=44.85 Aligned_cols=77 Identities=18% Similarity=0.333 Sum_probs=49.0
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c-----CCc-EE--EcCCCCCCccHHHHHHhhcC-
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F-----GVT-EF--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~-~v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. + +.. ++ .|..+ .+.+.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 468999987 9999998887777898 89998888776544322 1 211 12 23333 1233333333322
Q ss_pred -CCccEEEEccC
Q 016507 271 -GGADYCFECVG 281 (388)
Q Consensus 271 -g~~dvvid~~g 281 (388)
++.|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 37999999886
No 360
>PRK09242 tropinone reductase; Provisional
Probab=94.79 E-value=0.19 Score=45.28 Aligned_cols=79 Identities=20% Similarity=0.170 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-Hc-----CCcE-E--EcCCCCCCccHHHHHHhhc-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVTE-F--VNSKNCGDKSVSQIIIDMT- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l-----ga~~-v--~~~~~~~~~~~~~~i~~~~- 269 (388)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. ++ +... . .|-.+ ...+.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4678999987 9999999999988999 8999988876654332 22 2211 1 23322 122323232221
Q ss_pred -CCCccEEEEccCC
Q 016507 270 -DGGADYCFECVGL 282 (388)
Q Consensus 270 -~g~~dvvid~~g~ 282 (388)
-+++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 1379999999985
No 361
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.79 E-value=0.2 Score=45.54 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=47.3
Q ss_pred CCCEEEEEccc---hhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcEE--EcCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.++||+|++ ++|.++++.+-..|+ +|+.+++++...+.+++ .+.... .|-.+ .+++.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence 56789999873 799998888888899 88888776422222322 222122 23332 2333333333222
Q ss_pred -CCccEEEEccC
Q 016507 271 -GGADYCFECVG 281 (388)
Q Consensus 271 -g~~dvvid~~g 281 (388)
|++|++|++.|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 37999999987
No 362
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.79 E-value=0.34 Score=44.65 Aligned_cols=92 Identities=20% Similarity=0.216 Sum_probs=57.7
Q ss_pred CEEEEEccchhHHH-HHHHHHHcCCcEEEEE-cCCch--HHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 203 STVVIFGLGSIGLA-VAEGARLCGATRIIGV-DVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 203 ~~VlI~Gag~vG~~-ai~la~~~g~~~Vi~~-~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
-+|.|+|.|.+|.. +..+.+.-+. ++.++ +.+++ .+++++++|....+ .++.+.+......++|+||+
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~ 76 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFD 76 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEE
Confidence 47999999999986 4455555566 55544 44443 34667778865332 22333332211127999999
Q ss_pred ccCCHHHHHHHHHHhhcCCceEEEE
Q 016507 279 CVGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
+++.....+.+.+++..| -++++.
T Consensus 77 AT~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 77 ATSAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CCCHHHHHHHHHHHHHcC-CeEEEC
Confidence 999987777777777764 555544
No 363
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.13 Score=46.11 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=48.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhc--CCCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~~dvv 276 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++. .....+.. ..|..+ .+.+.+.+.+.. .+++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999987 9999999998888899 899998876541 11111211 223332 122333333222 1378999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 998873
No 364
>PRK06398 aldose dehydrogenase; Validated
Probab=94.72 E-value=0.11 Score=47.02 Aligned_cols=74 Identities=22% Similarity=0.284 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~--g~~dvv 276 (388)
.+.++||+|+ |.+|.+.+..+...|+ +|+.+++++.+.. .... ..|-.+ ...+.+.+.+... +++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4679999987 9999999999988999 8999887765422 1111 223333 1233333333221 379999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
|++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 365
>PRK07985 oxidoreductase; Provisional
Probab=94.71 E-value=0.49 Score=43.68 Aligned_cols=102 Identities=21% Similarity=0.139 Sum_probs=60.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc--hHHHHH----HHcCCcE---EEcCCCCCCccHHHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVTE---FVNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~~ 270 (388)
.+.++||+|+ |.+|.+.++.+...|+ +|+++.++. ++.+.+ +..+... ..|-.+ .+.+.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 5678999987 9999999998888899 888876543 222222 2233221 223332 1233333333222
Q ss_pred --CCccEEEEccCCH--------------------------HHHHHHHHHhhcCCceEEEEccC
Q 016507 271 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 271 --g~~dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
+++|+++.+.|.. ..++.++..+..+ |+++.++..
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3789999987631 1123444455566 899988764
No 366
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.71 E-value=0.17 Score=45.27 Aligned_cols=76 Identities=16% Similarity=0.295 Sum_probs=49.9
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcE-E--EcCCCCCCccHHHHHHhhcC--CCccEE
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-F--VNSKNCGDKSVSQIIIDMTD--GGADYC 276 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v--~~~~~~~~~~~~~~i~~~~~--g~~dvv 276 (388)
+|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.. ++... . .|-.+ .+.+.+.+.+... ++.|++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899987 9999999998888899 89999998877665443 34321 1 23222 1223333332222 379999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998874
No 367
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.69 E-value=0.3 Score=46.01 Aligned_cols=37 Identities=38% Similarity=0.496 Sum_probs=33.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchH
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK 238 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~ 238 (388)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+++...
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 89999886543
No 368
>PRK08317 hypothetical protein; Provisional
Probab=94.66 E-value=0.41 Score=42.32 Aligned_cols=102 Identities=27% Similarity=0.389 Sum_probs=68.0
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHHc----CCc-EEEcCCCCCCccHHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSVSQIII 266 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~ 266 (388)
+.+...+.++++||-+|.|. |..+..+++..+ ..++++++.++...+.+++. +.. .+...+. ..+
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 44667788999999999876 888888888763 23899999999888877664 111 1111111 111
Q ss_pred hhcCCCccEEEEcc-----CC-HHHHHHHHHHhhcCCceEEEEc
Q 016507 267 DMTDGGADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 267 ~~~~g~~dvvid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 304 (388)
.+..+.||+|+... .. ...+..+.+.|+++ |.++...
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 12223799887532 22 23478999999997 9988765
No 369
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.66 E-value=0.17 Score=44.30 Aligned_cols=111 Identities=17% Similarity=0.117 Sum_probs=67.6
Q ss_pred ccccchhhhhHHHHHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE--EEcC
Q 016507 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNS 253 (388)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~ 253 (388)
..+..+...++ +...++++++++||-+|.|. |..+..+++.. . +|++++.+++..+.+++ ++.+. +...
T Consensus 59 ~~~~~p~~~~~--l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~ 133 (212)
T PRK00312 59 QTISQPYMVAR--MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG 133 (212)
T ss_pred CeeCcHHHHHH--HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC
Confidence 33443444443 44567888999999998754 55555566654 3 89999998877665543 34432 2211
Q ss_pred CCCCCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEc
Q 016507 254 KNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g 304 (388)
+ ..+.+. ..+.||+|+-............+.|+++ |.++..-
T Consensus 134 d------~~~~~~--~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 134 D------GWKGWP--AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred C------cccCCC--cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 1 111110 1137999876555555467888999997 9987653
No 370
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.65 E-value=0.26 Score=43.38 Aligned_cols=97 Identities=21% Similarity=0.290 Sum_probs=63.3
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE--EEcCCCCCCccHHHHHHhhcCCCccEEE
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~~dvvi 277 (388)
-+|-+||=+|.|+ |+++.-+|+. |+ +|+++|-+++-.+.++...... -+|+.. ...+.+... ++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence 4778899998744 5666666654 68 9999999999988887532211 245554 233333322 14899997
Q ss_pred Ec-----cCCH-HHHHHHHHHhhcCCceEEEEcc
Q 016507 278 EC-----VGLA-SLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 278 d~-----~g~~-~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
.. +..+ ..+..+.++++|+ |.+...-.
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~STi 162 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLSTI 162 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEecc
Confidence 63 3333 2367889999997 88766543
No 371
>PRK06720 hypothetical protein; Provisional
Probab=94.65 E-value=0.27 Score=41.41 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=31.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHH
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF 239 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 239 (388)
.+.+++|+|+ +++|...+..+...|+ +|++++++++..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~ 53 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG 53 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence 4678999987 8899999888888898 899998876654
No 372
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.64 E-value=0.23 Score=44.68 Aligned_cols=79 Identities=19% Similarity=0.333 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchH--HHHHHHcCCcE-E--EcCCCCCCccHHHHHHhhcC--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~~--g~ 272 (388)
.+.++||+|+ |.+|.++++.+...|+ +|+.+++.+.. .+.+++++... . .|-.+ .+++.+.+.+... ++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence 4678999987 9999999998888899 88887654421 22333344221 1 22222 1233333333221 37
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|++|++.|.
T Consensus 86 ~D~li~~Ag~ 95 (253)
T PRK08993 86 IDILVNNAGL 95 (253)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 373
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.63 E-value=0.22 Score=45.70 Aligned_cols=68 Identities=19% Similarity=0.280 Sum_probs=49.3
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~ 283 (388)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|.... .. .+. +.+ ...|+||-|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---AS---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---cc---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999988888887888 89999999888888877764211 11 111 111 2678999888866
Q ss_pred H
Q 016507 284 S 284 (388)
Q Consensus 284 ~ 284 (388)
.
T Consensus 69 ~ 69 (279)
T PRK07417 69 L 69 (279)
T ss_pred H
Confidence 4
No 374
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.22 Score=44.84 Aligned_cols=78 Identities=19% Similarity=0.307 Sum_probs=49.4
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcC---CcE-EEcCCCCCCccHHHHHHhhcC--CCc
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG---VTE-FVNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lg---a~~-v~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. .+. +.. ..|-.+ .+.+...+.+... +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 468999987 9999998888877898 8999998877655433 221 211 223332 1222233332211 368
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999999874
No 375
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.60 E-value=0.4 Score=45.14 Aligned_cols=94 Identities=16% Similarity=0.061 Sum_probs=63.2
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE------cCCCCCCccHHHHHHhhcCCCccEEE
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV------NSKNCGDKSVSQIIIDMTDGGADYCF 277 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~------~~~~~~~~~~~~~i~~~~~g~~dvvi 277 (388)
+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+...+..... ..+-....+..+.+ ...|+||
T Consensus 6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~Vi 79 (328)
T PRK14618 6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFAV 79 (328)
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEEE
Confidence 79999999999999888888898 899999988877766654211000 00000001222222 2689999
Q ss_pred EccCCHHHHHHHHHHhhcCCceEEEEcc
Q 016507 278 ECVGLASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 278 d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
-|+.... +...++.++++ -.++.+..
T Consensus 80 ~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 80 VAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 9999987 78888888875 66665543
No 376
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.59 E-value=0.2 Score=44.91 Aligned_cols=77 Identities=22% Similarity=0.365 Sum_probs=49.3
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE-E--EcCCCCCCccHHHHHHhhc--CCC
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE-F--VNSKNCGDKSVSQIIIDMT--DGG 272 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~ 272 (388)
.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.. .+... . .|-.+ .+++.+.+.+.. .++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence 57999997 9999999988888899 89999988776554433 22221 1 23332 123333332222 136
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988864
No 377
>PRK08328 hypothetical protein; Provisional
Probab=94.59 E-value=0.31 Score=43.33 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=31.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
.+.+|+|+|+|++|..+++.+...|..+++.+|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346899999999999999999999998999987543
No 378
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.58 E-value=0.42 Score=40.50 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=29.4
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
+|+|+|+|++|...++.+...|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999998889998899998765
No 379
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.58 E-value=0.32 Score=42.11 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=31.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
...+|+|+|+|++|...++.+-..|.+++..+|.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35689999999999999999999999889998765
No 380
>PLN02256 arogenate dehydrogenase
Probab=94.51 E-value=0.61 Score=43.35 Aligned_cols=97 Identities=12% Similarity=0.167 Sum_probs=61.8
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCC
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG 272 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~ 272 (388)
+.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++.+|+.. + .+..+.+ ...
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~----~~~ 92 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFC----EEH 92 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHh----hCC
Confidence 3455555567789999999999998888888887 8999988764 35566677632 1 1122221 125
Q ss_pred ccEEEEccCCHHHHHHHHHH-----hhcCCceEEEEcc
Q 016507 273 ADYCFECVGLASLVQEAYAC-----CRKGWGKTIVLGV 305 (388)
Q Consensus 273 ~dvvid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 305 (388)
.|+||-|+.... +...++. +.++ ..++.++.
T Consensus 93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 788888887654 3443333 3344 55666654
No 381
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.51 E-value=0.24 Score=44.01 Aligned_cols=79 Identities=22% Similarity=0.233 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCCcE-E--EcCCCCCCccHHHHHHhhcC--CCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
++.++||+|+ |.+|..+++.+...|+ .|+..+++.++.+.+ ..++... + .|-.+ .+.+.+.+.+... +++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 4678999997 9999999988888898 888887776665543 3333221 2 22222 1223322222211 379
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999874
No 382
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.51 E-value=0.34 Score=44.75 Aligned_cols=70 Identities=20% Similarity=0.175 Sum_probs=49.3
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~ 283 (388)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+... .+..+.+. ..|+||.|+...
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 47889999999988887777898 89999999998888877665311 11222221 567888887765
Q ss_pred HHHH
Q 016507 284 SLVQ 287 (388)
Q Consensus 284 ~~~~ 287 (388)
..+.
T Consensus 67 ~~~~ 70 (291)
T TIGR01505 67 PQVE 70 (291)
T ss_pred HHHH
Confidence 4333
No 383
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.48 E-value=0.24 Score=44.67 Aligned_cols=79 Identities=19% Similarity=0.160 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHH---HHHHcCCcE---EEcCCCCCCccHHHHHHhhc--CC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE---IGKRFGVTE---FVNSKNCGDKSVSQIIIDMT--DG 271 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~---~~~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g 271 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++.++++..+ .+.+.+... ..|-.+ .+...+.+.+.. .+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence 5789999987 9999999998888999 8888877632222 222233221 223332 122222233221 13
Q ss_pred CccEEEEccCC
Q 016507 272 GADYCFECVGL 282 (388)
Q Consensus 272 ~~dvvid~~g~ 282 (388)
++|+++.+.|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 384
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.47 E-value=0.23 Score=44.59 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE-E--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
.+.+|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. ..+.+. + .|-.+ .....+.+.... .
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 9999999998888899 8888887766544332 223221 2 23333 122333333221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|+++.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 385
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.46 E-value=0.25 Score=44.16 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=51.0
Q ss_pred CCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCc--EE--EcCCCCCCccHHHHHHhhc
Q 016507 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EF--VNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 199 ~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~--~v--~~~~~~~~~~~~~~i~~~~ 269 (388)
..++.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+.. .+ .|-...+..++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999987 9999998888877899 899999887654332 233321 12 2222101122333222222
Q ss_pred C--CCccEEEEccCC
Q 016507 270 D--GGADYCFECVGL 282 (388)
Q Consensus 270 ~--g~~dvvid~~g~ 282 (388)
. +++|++|.+.+.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 2 378999998764
No 386
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.44 E-value=0.26 Score=43.77 Aligned_cols=79 Identities=22% Similarity=0.306 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-EE--cCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.++||+|+ |.+|..++..+...|+ +|+++++++++.+.+ +..+... ++ |-.+ ...+.+.+.+...
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD--YEEVTAAIEQLKNEL 82 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 3578999987 9999999998888899 899999887654432 2223221 12 2222 1233333333221
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (239)
T PRK07666 83 GSIDILINNAGI 94 (239)
T ss_pred CCccEEEEcCcc
Confidence 378999998874
No 387
>PRK06849 hypothetical protein; Provisional
Probab=94.43 E-value=1.7 Score=41.86 Aligned_cols=93 Identities=16% Similarity=0.118 Sum_probs=58.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE--EEcCCCCCCccHHHHHHhhcCC-CccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDG-GADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g-~~dvv 276 (388)
...+|||+|+ .++|+..+..++..|+ +|+++++++.......+ .++. .+.....+.+.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999998 6689999999999999 99999887654332111 2222 2322221224566777776666 89999
Q ss_pred EEccCCHHHHHHHHHHhhc
Q 016507 277 FECVGLASLVQEAYACCRK 295 (388)
Q Consensus 277 id~~g~~~~~~~~~~~l~~ 295 (388)
|-+......+......+..
T Consensus 81 IP~~e~~~~~a~~~~~l~~ 99 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSA 99 (389)
T ss_pred EECChHHHhHHhhhhhhcC
Confidence 9877543223333444544
No 388
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.43 E-value=0.33 Score=44.54 Aligned_cols=78 Identities=17% Similarity=0.245 Sum_probs=56.5
Q ss_pred CCCCCEEEEEccch-hHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 016507 199 VEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (388)
Q Consensus 199 ~~~~~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvi 277 (388)
.-.|.+|+|+|.|. +|...+.++...|+ .|+++.+.. .++.+.+ ..+|+|+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~~aDIvI 207 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----KQADIIV 207 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----ccCCEEE
Confidence 35788999999976 99999999999999 888876411 2222222 2789999
Q ss_pred EccCCHHHHHHHHHHhhcCCceEEEEccCC
Q 016507 278 ECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 278 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
.++|.+..+. .+.++++ ..++.+|...
T Consensus 208 ~AtG~~~~v~--~~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 208 GAVGKPELIK--KDWIKQG-AVVVDAGFHP 234 (283)
T ss_pred EccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence 9998766332 3568886 8888888643
No 389
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.16 Score=44.88 Aligned_cols=74 Identities=19% Similarity=0.219 Sum_probs=48.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc-EEEcCCCCCCccHHHHHHhhcCC-CccEEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCF 277 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g-~~dvvi 277 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++.+++++. +... ...|..+ .+.+.+.+.+.... +.|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999987 9999999998888898 899998876541 1111 1233333 13333334333333 689999
Q ss_pred EccCC
Q 016507 278 ECVGL 282 (388)
Q Consensus 278 d~~g~ 282 (388)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
No 390
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.42 E-value=0.26 Score=44.25 Aligned_cols=79 Identities=16% Similarity=0.283 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-E--EcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 270 (388)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+... . .|-.+ ...+...+.+...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999987 9999999988878899 899999887654332 2233211 2 23332 1233333332221
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 391
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.42 E-value=0.4 Score=44.15 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=67.8
Q ss_pred ccccchhhhhHHHHHHhcCC-CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCC
Q 016507 180 CLLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257 (388)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~-~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 257 (388)
..+||+...... +++..++ -.|.+|.|+|. +.+|.-.+.++...|+ .|++..+...
T Consensus 137 ~~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------- 194 (301)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC--------------------
Confidence 356766555555 4454454 46999999997 6999999999999999 8888754321
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 258 ~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
+..+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 --DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred --CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 2222222 6799999999987565544 8887 888899864
No 392
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.41 E-value=0.26 Score=44.82 Aligned_cols=78 Identities=17% Similarity=0.255 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch----HHHHHHHcCC--cEEEcCCCCCCccH---HHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE----KFEIGKRFGV--TEFVNSKNCGDKSV---SQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~lga--~~v~~~~~~~~~~~---~~~i~~~~~ 270 (388)
.|+.|||+|+ +++|.+.++=.-.+|+ +++..|.+++ ..+.+++.|- ..+.|-.+ .++. ++++++..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~- 112 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV- 112 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc-
Confidence 6899999987 8999886666666687 8888877664 3344444452 22334333 1333 33333322
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
|.+|++++..|.
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 379999998874
No 393
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.37 E-value=0.27 Score=43.28 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=55.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc--hHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS--EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
.+.+|||+|+|.+|.-=+..+...|+ +|.++...- +-.+++ +.|--..+ .++ +.+.- + .++++||-
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~-~~~~i~~~-~r~-----~~~~d--l--~g~~LVia 91 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLK-KYGNLKLI-KGN-----YDKEF--I--KDKHLIVI 91 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHH-hCCCEEEE-eCC-----CChHH--h--CCCcEEEE
Confidence 46799999999999887888878898 788875432 222222 22221222 222 11111 1 27899999
Q ss_pred ccCCHHHHHHHHHHh-hcCCceEEEEcc
Q 016507 279 CVGLASLVQEAYACC-RKGWGKTIVLGV 305 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 305 (388)
|++.+. ++..+... ... +.++....
T Consensus 92 ATdD~~-vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 92 ATDDEK-LNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCCCHH-HHHHHHHHHHHc-CCeEEEcC
Confidence 999887 55444444 443 66666654
No 394
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.34 E-value=0.25 Score=44.44 Aligned_cols=79 Identities=22% Similarity=0.164 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCC-chHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhc--CCCccE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADY 275 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~~dv 275 (388)
.+.++||+|+ |.+|...++.+...|+ +|+++.+. ++..+.++..++.. ..|-.+ .+.+.+.+.+.. .++.|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4678999987 9999999998888899 77776543 33344444334322 223333 123333333322 137999
Q ss_pred EEEccCC
Q 016507 276 CFECVGL 282 (388)
Q Consensus 276 vid~~g~ 282 (388)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 395
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.34 E-value=0.24 Score=49.26 Aligned_cols=70 Identities=27% Similarity=0.304 Sum_probs=49.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch-----HHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-----~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dv 275 (388)
.+.+|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|+....+... . . ..++|+
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~-----~----~~~~D~ 81 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T-----L----PEDTDL 81 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c-----c----cCCCCE
Confidence 46789999999999999999999999 8999886542 234466678765543322 1 0 116888
Q ss_pred EEEccCCH
Q 016507 276 CFECVGLA 283 (388)
Q Consensus 276 vid~~g~~ 283 (388)
|+-+.|.+
T Consensus 82 Vv~s~Gi~ 89 (480)
T PRK01438 82 VVTSPGWR 89 (480)
T ss_pred EEECCCcC
Confidence 88887754
No 396
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.33 E-value=0.33 Score=44.35 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=58.1
Q ss_pred CCCEEEEEcc-chhHHH-HHHHHHHcCCcEEEEEcCCchHHHHHH-----HcCC---cEEEcCCCCCCccHHHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLA-VAEGARLCGATRIIGVDVISEKFEIGK-----RFGV---TEFVNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~-ai~la~~~g~~~Vi~~~~~~~~~~~~~-----~lga---~~v~~~~~~~~~~~~~~i~~~~~ 270 (388)
-|+|.+|+|+ .++|.+ |-++|+ .|. +|+.+.|+++|++.++ +.++ .+++|..+.+ . ..+.+++.+.
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~-~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGD-E-VYEKLLEKLA 123 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCc-h-hHHHHHHHhc
Confidence 4789999998 899976 666777 899 8999999999987654 3453 2367776621 2 4566666666
Q ss_pred C-CccEEEEccCCH
Q 016507 271 G-GADYCFECVGLA 283 (388)
Q Consensus 271 g-~~dvvid~~g~~ 283 (388)
+ .+-+.++++|..
T Consensus 124 ~~~VgILVNNvG~~ 137 (312)
T KOG1014|consen 124 GLDVGILVNNVGMS 137 (312)
T ss_pred CCceEEEEeccccc
Confidence 6 888999998853
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.32 E-value=0.3 Score=43.29 Aligned_cols=70 Identities=13% Similarity=0.202 Sum_probs=49.3
Q ss_pred EEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch--HHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 016507 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 205 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
|+|+|+ |.+|...++.+...+. +|.++.++.. ..+.++..|+..+ .-+- +-.+.+.+... ++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999988888 8999888764 3455677888644 2222 11233333332 8999999888
No 398
>PRK06484 short chain dehydrogenase; Validated
Probab=94.32 E-value=0.19 Score=50.46 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHcCCcE---EEcCCCCCCccHHHHHHhhcC--CCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
.+.++||+|+ +.+|.+.++.+...|+ +|+.++++.++.+.+ ++++... ..|-.+ .+.+.+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5678999987 9999999999988999 899998888776543 4455432 234333 1333333333221 379
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998874
No 399
>PLN03075 nicotianamine synthase; Provisional
Probab=94.31 E-value=0.34 Score=44.52 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=63.4
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHHcC-----CcEEEcCCCCCCccHHHHHHhhcCCCc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
.+.++|+-+|.|+.++.++.+++... -.+++.++.+++..+.++++- ...-+.... .+..+... ..++|
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~--~l~~F 196 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTE--SLKEY 196 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhccc--ccCCc
Confidence 37799999999999998888886543 238999999999888887642 111111111 12221110 12389
Q ss_pred cEEEEcc------CC-HHHHHHHHHHhhcCCceEEEE
Q 016507 274 DYCFECV------GL-ASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 274 dvvid~~------g~-~~~~~~~~~~l~~~~G~~v~~ 303 (388)
|+||-.+ .. ...+....+.|++| |.++.=
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 9998764 11 24468888999996 776644
No 400
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.31 E-value=0.2 Score=45.80 Aligned_cols=75 Identities=20% Similarity=0.183 Sum_probs=44.1
Q ss_pred EEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-c----C---CcEE--EcCCCCCCccHHHHHHhhcCC-C
Q 016507 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----G---VTEF--VNSKNCGDKSVSQIIIDMTDG-G 272 (388)
Q Consensus 205 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----g---a~~v--~~~~~~~~~~~~~~i~~~~~g-~ 272 (388)
|||+|+ |++|...++-+...+..+++.+++++.++..++. + . .... ..-.+ -.-.+.+...... +
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigD---vrd~~~l~~~~~~~~ 77 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGD---VRDKERLNRIFEEYK 77 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTS---CCHHHHHHHHTT--T
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeec---ccCHHHHHHHHhhcC
Confidence 799987 9999998888888887799999999987755443 3 1 1111 00111 1223445555545 9
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+||++..-
T Consensus 78 pdiVfHaAA~ 87 (293)
T PF02719_consen 78 PDIVFHAAAL 87 (293)
T ss_dssp -SEEEE----
T ss_pred CCEEEEChhc
Confidence 9999998764
No 401
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.30 E-value=0.19 Score=47.62 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=48.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHH-HHHcC----CcEE-EcCCCCCCccHHHHHHhhcCC-C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFG----VTEF-VNSKNCGDKSVSQIIIDMTDG-G 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lg----a~~v-~~~~~~~~~~~~~~i~~~~~g-~ 272 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+++++++..... ...++ ...+ .|-.+ .+.+.++..+ +
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~------~~~~~~~~~~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD------AAKLRKAIAEFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC------HHHHHHHHhhcC
Confidence 4678999987 9999999999988898 89998876654321 12222 1111 12222 2233333333 7
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|+||++.+.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 8999999873
No 402
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.30 E-value=0.24 Score=47.83 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=61.6
Q ss_pred CCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHH-------HHHHc-CCcEE-EcCCCCCCccHHHHHHh
Q 016507 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSVSQIIID 267 (388)
Q Consensus 198 ~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-------~~~~l-ga~~v-~~~~~~~~~~~~~~i~~ 267 (388)
+-..+.+|||+|+ |.+|..+++.+...|+ +|++++++..+.+ ..... ++..+ .|..+ ...+.+.+..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~ 132 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFS 132 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHH
Confidence 3456779999987 9999999998888899 8999988765421 11111 33322 23333 1223333322
Q ss_pred hcCCCccEEEEccCCH------------HHHHHHHHHhhcC-CceEEEEccC
Q 016507 268 MTDGGADYCFECVGLA------------SLVQEAYACCRKG-WGKTIVLGVD 306 (388)
Q Consensus 268 ~~~g~~dvvid~~g~~------------~~~~~~~~~l~~~-~G~~v~~g~~ 306 (388)
. ++++|+||+|.+.. .....+++.+... -++++.++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 2 11699999988642 1122344444432 1468877653
No 403
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.28 E-value=0.86 Score=40.63 Aligned_cols=103 Identities=22% Similarity=0.201 Sum_probs=59.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCC-chHH-H---HHHHcCCc-EE--EcCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKF-E---IGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~-~---~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.+|||+|+ |.+|...++.+...|+ +|+.+.++ .+.. + .++..+.. .. .|..+ ...+...+.+...
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDR 81 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHH
Confidence 3578999987 9999998888888899 67665433 2222 2 22233332 12 23332 1222222222211
Q ss_pred -CCccEEEEccCC----------H---------------HHHHHHHHHhhcCCceEEEEccCC
Q 016507 271 -GGADYCFECVGL----------A---------------SLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 271 -g~~dvvid~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
+++|++|.+.|. . ...+.+++.+... |+++.++...
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 378999999973 0 0123445555675 8999888643
No 404
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.27 E-value=0.37 Score=44.00 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=66.3
Q ss_pred cccchhhhhHHHHHHhcCCC-CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCC
Q 016507 181 LLSCGVSTGVGAAWRTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (388)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~~-~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 258 (388)
.+||+....+. +.+..++. .|.+|+|+|. ..+|.-.+.++...|+ .|+...+. .
T Consensus 137 ~~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t--- 192 (285)
T PRK14189 137 FRPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T--- 192 (285)
T ss_pred CcCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C---
Confidence 45665555444 34444543 6899999997 5559999999999999 88875321 1
Q ss_pred ccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 259 ~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.++.+.++ ..|+|+-++|.+..+.. +.++++ ..++.+|..
T Consensus 193 ~~l~~~~~-----~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin 232 (285)
T PRK14189 193 RDLAAHTR-----QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMN 232 (285)
T ss_pred CCHHHHhh-----hCCEEEEcCCCcCccCH--HHcCCC-CEEEEcccc
Confidence 33433332 68999999998874443 788997 889999864
No 405
>PLN02928 oxidoreductase family protein
Probab=94.27 E-value=0.32 Score=46.16 Aligned_cols=96 Identities=23% Similarity=0.354 Sum_probs=59.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcC-----CcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~i~~~~~g~~dv 275 (388)
.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++..+... ..++ ...+.+... ...++.+.+. ..|+
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~-----~aDi 229 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHh-----hCCE
Confidence 57899999999999999999999999 99999876432111 1110 000111000 0123333332 5788
Q ss_pred EEEccCCHHH-----HHHHHHHhhcCCceEEEEcc
Q 016507 276 CFECVGLASL-----VQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 276 vid~~g~~~~-----~~~~~~~l~~~~G~~v~~g~ 305 (388)
|+-+.+.... -...+..|+++ ..+|.+|.
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 8887764321 14667778886 77777763
No 406
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=94.26 E-value=1.3 Score=41.59 Aligned_cols=130 Identities=22% Similarity=0.227 Sum_probs=80.0
Q ss_pred EEEEEccchhH-HHHHHHHHHcC--CcEEEEEcCCchHHH-HHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 204 TVVIFGLGSIG-LAVAEGARLCG--ATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 204 ~VlI~Gag~vG-~~ai~la~~~g--~~~Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
+|.|+|.|.++ ...+..++..+ +.-+.+.++++++.+ .++++|..+++ .++.+.+.. ..+|+|+-+
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll~~---~~iD~V~Ia 74 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY-------TDLEELLAD---PDIDAVYIA 74 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc-------CCHHHHhcC---CCCCEEEEc
Confidence 68899987554 44555555544 434555577887754 56668876333 234333322 269999999
Q ss_pred cCCHHHHHHHHHHhhcCCceEEEEccCCCCCccccCHHHH------Hh-cCcEEEEeeecCCCccCcHHHHHHHHhCCCC
Q 016507 280 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV------LH-SGKILMGSLFGGLKAKSDIPILLKRYMDKEL 352 (388)
Q Consensus 280 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~------~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 352 (388)
+......+.+.+.|.. |+=|++- +++..++... -. +++.+.-... +.....++.+-+++.+|.+
T Consensus 75 tp~~~H~e~~~~AL~a--GkhVl~E-----KPla~t~~ea~~l~~~a~~~~~~l~v~~~--~Rf~p~~~~~k~li~~g~l 145 (342)
T COG0673 75 TPNALHAELALAALEA--GKHVLCE-----KPLALTLEEAEELVELARKAGVKLMVGFN--RRFDPAVQALKELIDSGAL 145 (342)
T ss_pred CCChhhHHHHHHHHhc--CCEEEEc-----CCCCCCHHHHHHHHHHHHHcCCceeeehh--hhcCHHHHHHHHHHhcCCc
Confidence 9998889999999987 5655553 5555555432 12 2333332221 2223567888888888844
No 407
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.25 E-value=0.2 Score=45.78 Aligned_cols=71 Identities=20% Similarity=0.064 Sum_probs=50.8
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 016507 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 197 ~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~~dv 275 (388)
.+...+.+++|+|+|+.+.+++..+...|+.+|+++.|+.++.+.+.+ ++.. +.+.+. ...+|+
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~~---~~~~dl 181 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDLG---GIEADI 181 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhcc---cccCCE
Confidence 344556799999999999999999999999789999999887765543 3311 101111 126899
Q ss_pred EEEccCC
Q 016507 276 CFECVGL 282 (388)
Q Consensus 276 vid~~g~ 282 (388)
||+|++.
T Consensus 182 vINaTp~ 188 (272)
T PRK12550 182 LVNVTPI 188 (272)
T ss_pred EEECCcc
Confidence 9999864
No 408
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.25 E-value=0.34 Score=44.54 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=29.8
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 200 ~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
..+.++||+|+ +++|.+.++.+...|+ +|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 45789999987 9999999988888899 788876653
No 409
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.25 E-value=0.25 Score=45.00 Aligned_cols=36 Identities=39% Similarity=0.426 Sum_probs=30.5
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 237 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 237 (388)
.+.++||+|+ |.+|..+++.+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999987 9999999998888899 8998887653
No 410
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.25 E-value=0.46 Score=43.91 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=49.0
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCCH
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 283 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~~ 283 (388)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+... .+..+.+ ...|+||.|+...
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~-----~~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVA-----EQCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHH-----hcCCEEEEeCCCH
Confidence 68999999999987777777888 89999999888877776665311 1122222 1568888887765
Q ss_pred HHHH
Q 016507 284 SLVQ 287 (388)
Q Consensus 284 ~~~~ 287 (388)
..+.
T Consensus 70 ~~~~ 73 (296)
T PRK11559 70 PHVK 73 (296)
T ss_pred HHHH
Confidence 4343
No 411
>PRK04457 spermidine synthase; Provisional
Probab=94.24 E-value=0.53 Score=42.76 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=63.9
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-CC----c--EEEcCCCCCCccHHHHHHhhcCCC
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSVSQIIIDMTDGG 272 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga----~--~v~~~~~~~~~~~~~~i~~~~~g~ 272 (388)
.++.+||++|.|. |.++..+++.....+|++++.+++-.+.+++. +. + .++. .+..+.+.+. .+.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4567899999865 77777887776434999999999988888763 32 1 1222 2333444332 347
Q ss_pred ccEEE-EccCC---------HHHHHHHHHHhhcCCceEEEE
Q 016507 273 ADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 273 ~dvvi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 303 (388)
||+|+ |+... ...++.+.+.|+++ |.++.-
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 99996 43221 35578899999997 998763
No 412
>PRK12743 oxidoreductase; Provisional
Probab=94.24 E-value=0.29 Score=44.00 Aligned_cols=78 Identities=18% Similarity=0.081 Sum_probs=46.8
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcC-CchHHHH----HHHcCCc-EE--EcCCCCCCccHHHHHHhhcC--
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI----GKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~----~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-- 270 (388)
+.+|||+|+ |.+|..+++.+...|+ +|+.+.+ +.++.+. ++..+.. +. .|-.+ .+.+...+.+...
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999987 9999999999888999 7877644 4433322 2234432 22 23332 1222222222211
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 413
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.28 Score=44.78 Aligned_cols=77 Identities=25% Similarity=0.345 Sum_probs=48.0
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HH---cCCcE-E--EcCCCCCCccHHHHHHhhc-CCCc
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FGVTE-F--VNSKNCGDKSVSQIIIDMT-DGGA 273 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~---lga~~-v--~~~~~~~~~~~~~~i~~~~-~g~~ 273 (388)
+.++||+|+|.+|..++..+. .|+ +|+.+++++++.+.+ +. .+... . .|-.+ .+.+.+.+.+.. .+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 357888899999999888874 788 899998887655432 22 23221 2 23333 123333333321 1479
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|++.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999999884
No 414
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.19 E-value=0.31 Score=44.11 Aligned_cols=79 Identities=23% Similarity=0.389 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE---EEcCCCCCCccHHHHHHhhcC--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE---FVNSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~---v~~~~~~~~~~~~~~i~~~~~-- 270 (388)
.+.++||+|+ +.+|...+..+...|+ +|+.+++++++.+.+. +.+... ..|-.+ .....+.+.+...
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 5678999987 9999998888888899 8888888876654322 234322 123332 1222222222211
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 368999999874
No 415
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.16 E-value=0.36 Score=49.03 Aligned_cols=76 Identities=11% Similarity=0.181 Sum_probs=57.9
Q ss_pred CEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 016507 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (388)
Q Consensus 203 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~ 282 (388)
+.|+|.|.|.+|...++.++..|. ++++++.++++.+.+++.|...+.-... -.+.+++..-..+|.++-+++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~-----~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA-----NEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC-----CHHHHHhcCccccCEEEEEcCC
Confidence 689999999999999999999998 8999999999999999888765553222 1333433322278988878776
Q ss_pred HH
Q 016507 283 AS 284 (388)
Q Consensus 283 ~~ 284 (388)
+.
T Consensus 492 ~~ 493 (558)
T PRK10669 492 GY 493 (558)
T ss_pred hH
Confidence 54
No 416
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.15 E-value=0.49 Score=42.18 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=64.5
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHH----cCCcEEEcCCCCCCccHHHHHHh
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 267 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~ 267 (388)
+....+..+..+||-+|.| +|..++.+++.++ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.+
T Consensus 60 L~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~ 135 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQ 135 (234)
T ss_pred HHHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHH
Confidence 3345567778899999863 2555556666543 3499999999988777654 45432222112 233444444
Q ss_pred hc----CCCccEEEEccC---CHHHHHHHHHHhhcCCceEEE
Q 016507 268 MT----DGGADYCFECVG---LASLVQEAYACCRKGWGKTIV 302 (388)
Q Consensus 268 ~~----~g~~dvvid~~g---~~~~~~~~~~~l~~~~G~~v~ 302 (388)
+. .+.||+||--.. -...+..+++.+++| |.++.
T Consensus 136 l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~ 176 (234)
T PLN02781 136 LLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAF 176 (234)
T ss_pred HHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEE
Confidence 32 237999975432 123377889999997 87664
No 417
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=94.14 E-value=0.28 Score=43.31 Aligned_cols=72 Identities=15% Similarity=0.222 Sum_probs=48.1
Q ss_pred EEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcE-EEcCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 016507 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 205 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
|||+|+ |.+|..++..+...|. .|+++.+++........ ..... ..|..+ .+.+.+.+... .+|+||++.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~--~~~~~~~~~~~---~~d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLTD--KEQLEKLLEKA---NIDVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETTS--HHHHHHHHHHH---TESEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeeccc--ccccccccccc---CceEEEEeec
Confidence 799997 9999999999999999 78888777766554433 23322 223332 12233333322 7899999988
Q ss_pred C
Q 016507 282 L 282 (388)
Q Consensus 282 ~ 282 (388)
.
T Consensus 75 ~ 75 (236)
T PF01370_consen 75 F 75 (236)
T ss_dssp S
T ss_pred c
Confidence 6
No 418
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.12 E-value=0.4 Score=42.70 Aligned_cols=76 Identities=20% Similarity=0.196 Sum_probs=47.5
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH-HHc----CCc-EEE--cCCCCCCccHHHHHHhhcCCCc
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVT-EFV--NSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l----ga~-~v~--~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ +.+ +.. +++ |-.+ ..++.+.+.+. ...+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~-~~~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSL-PALP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHH-hhcC
Confidence 47899987 9999999998888899 899999888765432 221 111 122 2222 12233333322 2257
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|+++.+.|.
T Consensus 78 d~vv~~ag~ 86 (243)
T PRK07102 78 DIVLIAVGT 86 (243)
T ss_pred CEEEECCcC
Confidence 999987764
No 419
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.11 E-value=0.66 Score=41.87 Aligned_cols=99 Identities=20% Similarity=0.201 Sum_probs=65.2
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc-EEEcCCCCCCccHHHHHHhhcC-
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~- 270 (388)
+.....+.++++||=+|.|. |..+..+++.....+|++++.++...+.+++.-.. .++.. +.. ++..
T Consensus 23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~ 91 (258)
T PRK01683 23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPP 91 (258)
T ss_pred HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCC
Confidence 34555677889999998754 66677777766434999999999888877664221 12221 111 1112
Q ss_pred CCccEEEEccCC------HHHHHHHHHHhhcCCceEEEE
Q 016507 271 GGADYCFECVGL------ASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 271 g~~dvvid~~g~------~~~~~~~~~~l~~~~G~~v~~ 303 (388)
..||+|+....- ...+..+.+.|+++ |.++..
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 279999764432 24478899999997 998775
No 420
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.09 E-value=0.29 Score=45.50 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
.+.++||+|+ +++|.++++.+...|+ +|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4789999987 8999999998888999 89888876
No 421
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.08 E-value=0.47 Score=43.36 Aligned_cols=95 Identities=21% Similarity=0.286 Sum_probs=66.5
Q ss_pred ccccchhhhhHHHHHHhcCCC-CCCEEEEEccc-hhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCC
Q 016507 180 CLLSCGVSTGVGAAWRTANVE-VGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257 (388)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~~-~~~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 257 (388)
..+||+....+. +.+..++. .|.+|+|+|.| .+|.-++.++...|+ .|.+..+. +
T Consensus 135 ~~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~-------------------t-- 191 (285)
T PRK14191 135 GFVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL-------------------T-- 191 (285)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC-------------------c--
Confidence 346766665555 44555554 69999999975 999999999999999 78776321 1
Q ss_pred CccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 258 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 258 ~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.++.+.++ ..|+|+-++|.+..+. -+.++++ ..++.+|..
T Consensus 192 -~~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 192 -KDLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred -HHHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 22333332 6899999999887333 3467887 888999864
No 422
>PLN00016 RNA-binding protein; Provisional
Probab=94.08 E-value=0.51 Score=45.36 Aligned_cols=95 Identities=16% Similarity=0.126 Sum_probs=59.5
Q ss_pred CCEEEEE----cc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHH-----------HHHcCCcEEEcCCCCCCccHHHHH
Q 016507 202 GSTVVIF----GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-----------GKRFGVTEFVNSKNCGDKSVSQII 265 (388)
Q Consensus 202 ~~~VlI~----Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~-----------~~~lga~~v~~~~~~~~~~~~~~i 265 (388)
..+|||+ |+ |.+|..++..+...|+ +|++++++++.... +...++..+. .++.+ +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-~ 122 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-V 122 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-H
Confidence 3689999 98 9999999998888898 99999887654221 1223444332 12222 2
Q ss_pred HhhcCC-CccEEEEccCCHH-HHHHHHHHhhcC-CceEEEEcc
Q 016507 266 IDMTDG-GADYCFECVGLAS-LVQEAYACCRKG-WGKTIVLGV 305 (388)
Q Consensus 266 ~~~~~g-~~dvvid~~g~~~-~~~~~~~~l~~~-~G~~v~~g~ 305 (388)
.+.... ++|+|+++.+... ....+++.+... -.+++.++.
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 222223 8999999977432 244556666543 136776664
No 423
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.08 E-value=0.41 Score=44.48 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=46.9
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc-hHH-HH---HHHcCCcEEEcCCCCCCccHHHHHHhhc--CCC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKF-EI---GKRFGVTEFVNSKNCGDKSVSQIIIDMT--DGG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~-~~---~~~lga~~v~~~~~~~~~~~~~~i~~~~--~g~ 272 (388)
.+.++||+|+ |.+|...++.+...|+ +|++.++.. ++. +. ++..|....+..-+..+.+-.+.+.+.. .|+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4678999987 9999998888888899 888887643 222 22 2233432222211111122222222111 248
Q ss_pred ccEEEEccCC
Q 016507 273 ADYCFECVGL 282 (388)
Q Consensus 273 ~dvvid~~g~ 282 (388)
+|++|++.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 424
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.07 E-value=0.32 Score=42.82 Aligned_cols=88 Identities=19% Similarity=0.147 Sum_probs=53.7
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc----------hHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS----------EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~----------~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~ 269 (388)
..|.+|+|.|.|.+|..+++++...|++.|.+++.+. +..+..+..+....+...+ .--.+.+..
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~---~~~~~~l~~-- 95 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQD---YFPGEAILG-- 95 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCccc---ccCccccee--
Confidence 3678999999999999999999999985666677666 5666555543221111100 000011211
Q ss_pred CCCccEEEEccCCHHHHHHHHHHh
Q 016507 270 DGGADYCFECVGLASLVQEAYACC 293 (388)
Q Consensus 270 ~g~~dvvid~~g~~~~~~~~~~~l 293 (388)
-++|+++.|......-......+
T Consensus 96 -~~~DVlipaA~~~~i~~~~a~~l 118 (217)
T cd05211 96 -LDVDIFAPCALGNVIDLENAKKL 118 (217)
T ss_pred -ccccEEeeccccCccChhhHhhc
Confidence 17899999887664333333333
No 425
>PRK01581 speE spermidine synthase; Validated
Probab=94.06 E-value=1 Score=42.61 Aligned_cols=104 Identities=13% Similarity=0.062 Sum_probs=64.6
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcC-Cc----EEEcCCCC--CCccHHHHHHhhcCC
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VT----EFVNSKNC--GDKSVSQIIIDMTDG 271 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a~----~v~~~~~~--~~~~~~~~i~~~~~g 271 (388)
.....+|||+|+| .|.++..+++..+..+|++++.+++-.+.++++. .. ..++.... ...+..+.+.+ ..+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~ 225 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS 225 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence 3445699999865 4667778888776669999999999899888631 00 00000000 00223334433 334
Q ss_pred CccEEEEccCC-----------HHHHHHHHHHhhcCCceEEEEcc
Q 016507 272 GADYCFECVGL-----------ASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 272 ~~dvvid~~g~-----------~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
.||+||--... ...+..+.+.|+++ |.++....
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 89999654322 12367888999997 99887654
No 426
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.02 E-value=0.45 Score=43.44 Aligned_cols=94 Identities=17% Similarity=0.282 Sum_probs=67.2
Q ss_pred cccchhhhhHHHHHHhcCCC-CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCC
Q 016507 181 LLSCGVSTGVGAAWRTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (388)
Q Consensus 181 ~~~~~~~ta~~~l~~~~~~~-~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 258 (388)
.+||+....+. +++..++. .|.+|+|+|- ..+|.-++.++...|+ .|++..+. .
T Consensus 138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~-------------------T--- 193 (285)
T PRK10792 138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRF-------------------T--- 193 (285)
T ss_pred CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECC-------------------C---
Confidence 45766665555 44555543 6999999997 5599999999999999 88887542 1
Q ss_pred ccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 259 KSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 259 ~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.++.+.++ .+|+++.++|.+..+.. +.++++ ..++.+|..
T Consensus 194 ~~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 194 KNLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CCHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 23333332 68999999998874433 778887 888899864
No 427
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.29 Score=44.43 Aligned_cols=76 Identities=22% Similarity=0.232 Sum_probs=47.7
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-EE--cCCCCCCccHHHHHHhhc--CCCc
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--DGGA 273 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~--~g~~ 273 (388)
+|||+|+ |.+|...++.+...|+ +|+.++++.++.+.+ +..+.+. ++ |-.+ ...+.+.+.+.. .+++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899987 9999999888888899 899998887665432 2223222 12 2222 122233222221 1379
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|.+.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999999874
No 428
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.99 E-value=0.56 Score=45.89 Aligned_cols=105 Identities=12% Similarity=0.178 Sum_probs=64.4
Q ss_pred HHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCc-EE--EcCCCCCCccHHHHHH
Q 016507 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIII 266 (388)
Q Consensus 194 ~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~ 266 (388)
.....+.+|++||=+|+|+ |..++.+++.++-.+|++++.++++.+.++ ++|.+ .+ .+.+. ..... .
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~~~-~- 304 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGPSQ-W- 304 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccccc-c-
Confidence 3456788999999988754 444445555554238999999999877654 35654 22 22111 11100 0
Q ss_pred hhcCCCccEEEE---ccCC-------------------------HHHHHHHHHHhhcCCceEEEEccC
Q 016507 267 DMTDGGADYCFE---CVGL-------------------------ASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 267 ~~~~g~~dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
...+.||.||- |+|. ...+..+++.++++ |+++....+
T Consensus 305 -~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs 370 (426)
T TIGR00563 305 -AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS 370 (426)
T ss_pred -ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 01127999964 5542 13467888999997 999876543
No 429
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=93.98 E-value=0.34 Score=41.87 Aligned_cols=100 Identities=12% Similarity=0.161 Sum_probs=59.0
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc----CCcEEEcCCCCCCccHHHHHHhh
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~ 268 (388)
+.+.....++.+||-+|.|. |..++.+++ .|. +|++++.++.-.+.+++. +....+.. .+... . .+
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~-----~d~~~-~-~~ 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDA-----YDINA-A-AL 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe-----ccchh-c-cc
Confidence 33444555667899988744 666666666 477 999999998777665432 33211110 11110 0 11
Q ss_pred cCCCccEEEEccC-----C---HHHHHHHHHHhhcCCceEEEEc
Q 016507 269 TDGGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 269 ~~g~~dvvid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 304 (388)
.+.||+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 237999976432 1 23467888889997 9865543
No 430
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=93.97 E-value=0.29 Score=44.04 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=60.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc--CCcEE-EcCCCCCCccHHHHHHhhcCCCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l--ga~~v-~~~~~~~~~~~~~~i~~~~~g~~dvv 276 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++....... ++..+ .|..+ . .+.+.+....++|+|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCEE
Confidence 4578999997 9999999988877898 898888877664432211 23222 23322 1 122323221279999
Q ss_pred EEccCCHH-------------HHHHHHHHhhcC-CceEEEEccC
Q 016507 277 FECVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD 306 (388)
Q Consensus 277 id~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 306 (388)
|.+.|... ....+++.+... .++++.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 98876421 134445555442 2578877653
No 431
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=93.96 E-value=0.27 Score=44.75 Aligned_cols=132 Identities=18% Similarity=0.175 Sum_probs=86.3
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCC--------CCccHHHHHHhh
Q 016507 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC--------GDKSVSQIIIDM 268 (388)
Q Consensus 197 ~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~--------~~~~~~~~i~~~ 268 (388)
+...++.++++.|+|.+|+.++-.++..|+ -|...+....+.+-.+++|+..+-..++. .++++.+.-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 345567889999999999999999999999 88888888888888888887543211111 122233332232
Q ss_pred cCC---CccEEEEccCCH------HHHHHHHHHhhcCCceEEEEccCCCCCc-cccCHHHHHhcCcEEEEee
Q 016507 269 TDG---GADYCFECVGLA------SLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVLHSGKILMGSL 330 (388)
Q Consensus 269 ~~g---~~dvvid~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~i~g~~ 330 (388)
... ++|+||-+.-.+ .........+++| ..++.+....++.. .+-+-.....++.+|.|..
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 222 899999876432 2256888999997 99998876443322 2222222234577787764
No 432
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.25 Score=43.30 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=46.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEE--cCCCCCCccHHHHHHhhcCC--CccEE
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV--NSKNCGDKSVSQIIIDMTDG--GADYC 276 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~--~~~~~~~~~~~~~i~~~~~g--~~dvv 276 (388)
.++||+|+ |.+|...+..+... + +|++++++.++.+.+.+ +..-+++ |-.+ .+.+.+...+ +.|++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~------~~~~~~~~~~~~~id~v 75 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD------PEAIAAAVEQLGRLDVL 75 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC------HHHHHHHHHhcCCCCEE
Confidence 57999987 99999888866655 6 89999988776554442 2111222 2222 2233333332 69999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
|.+.|.
T Consensus 76 i~~ag~ 81 (227)
T PRK08219 76 VHNAGV 81 (227)
T ss_pred EECCCc
Confidence 999874
No 433
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=93.90 E-value=0.28 Score=44.74 Aligned_cols=82 Identities=18% Similarity=0.213 Sum_probs=52.2
Q ss_pred CCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCc------EEEcCCCC-CCccHHHHHHh
Q 016507 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNC-GDKSVSQIIID 267 (388)
Q Consensus 200 ~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~------~v~~~~~~-~~~~~~~~i~~ 267 (388)
-.|..+||+|+ .++|.+++..+-..|+ +|+.+++++++.+...+ .+.. .+.|..+. ....+.+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35678899987 9999999999999999 99999999887654432 2221 23333320 01112222222
Q ss_pred hcCCCccEEEEccCC
Q 016507 268 MTDGGADYCFECVGL 282 (388)
Q Consensus 268 ~~~g~~dvvid~~g~ 282 (388)
...|+.|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334579999997764
No 434
>PLN02476 O-methyltransferase
Probab=93.89 E-value=0.73 Score=42.04 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=65.6
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHH----cCCcEEEcCCCCCCccHHHHHHh
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 267 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~ 267 (388)
+....+..+..+||-+|. .+|..++.+|+.++ -.+|+.++.+++..+.+++ .|..+-+.-.. .+..+.+.+
T Consensus 110 L~~L~~~~~ak~VLEIGT-~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~ 185 (278)
T PLN02476 110 LAMLVQILGAERCIEVGV-YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKS 185 (278)
T ss_pred HHHHHHhcCCCeEEEecC-CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHH
Confidence 334556677889999986 33666667777653 2279999999988777754 46543222222 334444444
Q ss_pred hc----CCCccEEEEccCCH---HHHHHHHHHhhcCCceEEE
Q 016507 268 MT----DGGADYCFECVGLA---SLVQEAYACCRKGWGKTIV 302 (388)
Q Consensus 268 ~~----~g~~dvvid~~g~~---~~~~~~~~~l~~~~G~~v~ 302 (388)
+. .+.||.||--.... ..++.+++.++++ |.++.
T Consensus 186 l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~ 226 (278)
T PLN02476 186 MIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVM 226 (278)
T ss_pred HHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEE
Confidence 32 23799995433322 3377889999996 77664
No 435
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.88 E-value=0.51 Score=39.15 Aligned_cols=85 Identities=14% Similarity=0.041 Sum_probs=55.6
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC------cEEEcCCCCCCccHHHHHHhhcCCCccEEE
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV------TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 277 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga------~~v~~~~~~~~~~~~~~i~~~~~g~~dvvi 277 (388)
+|.|+|+|..|.+++..+...|. +|....++++..+.+++.+. ...+...-.-..++.+.+. +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 58899999999999999999997 99999999887776665321 0101000000123444442 789999
Q ss_pred EccCCHHHHHHHHHHhhc
Q 016507 278 ECVGLASLVQEAYACCRK 295 (388)
Q Consensus 278 d~~g~~~~~~~~~~~l~~ 295 (388)
-++.+.. .+..++.+.+
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 9999876 6666666666
No 436
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.86 E-value=0.43 Score=49.02 Aligned_cols=78 Identities=17% Similarity=0.268 Sum_probs=59.6
Q ss_pred CCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 016507 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
.++|+|.|.|.+|...++.++..|. ++++++.++++.+.+++.|...++-.. .-.+.+++..-..+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDa-----t~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDA-----TRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeC-----CCHHHHHhcCCCcCCEEEEEeC
Confidence 3689999999999999999999999 899999999999999998876443221 1223343332228999999998
Q ss_pred CHHH
Q 016507 282 LASL 285 (388)
Q Consensus 282 ~~~~ 285 (388)
.+..
T Consensus 474 d~~~ 477 (621)
T PRK03562 474 DPQT 477 (621)
T ss_pred CHHH
Confidence 8753
No 437
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.85 E-value=1.1 Score=38.20 Aligned_cols=99 Identities=17% Similarity=0.269 Sum_probs=62.6
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH----cCCcE--EEcCCCCCCccHHHHHH
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 266 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~ 266 (388)
+.....+.++++||=+|.|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. + ....
T Consensus 23 ~~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-d-----~~~~-- 93 (187)
T PRK08287 23 ALSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-E-----APIE-- 93 (187)
T ss_pred HHHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-C-----chhh--
Confidence 34556778899999888755 6666666765432399999999987766653 33322 2221 1 1111
Q ss_pred hhcCCCccEEEEccC---CHHHHHHHHHHhhcCCceEEEE
Q 016507 267 DMTDGGADYCFECVG---LASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 267 ~~~~g~~dvvid~~g---~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
..+.||+|+.... ....+..+.+.|+++ |.++..
T Consensus 94 --~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 94 --LPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred --cCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 1237999986432 123467888999997 988764
No 438
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=93.85 E-value=0.86 Score=41.71 Aligned_cols=100 Identities=13% Similarity=0.141 Sum_probs=65.1
Q ss_pred CEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-CCcE--EEcCCCC-CCccHHHHHHhhcCCCccEEE-
Q 016507 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTE--FVNSKNC-GDKSVSQIIIDMTDGGADYCF- 277 (388)
Q Consensus 203 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~~--v~~~~~~-~~~~~~~~i~~~~~g~~dvvi- 277 (388)
.+|||+|+|. |-.+-.++++....++++++.+++-.++++++ +... ..|.+-. -..+-.+.+++... +||+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999997655 66677888888888999999999999988873 2211 0011110 01223344444332 799995
Q ss_pred EccCC---------HHHHHHHHHHhhcCCceEEEEcc
Q 016507 278 ECVGL---------ASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 278 d~~g~---------~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
|+... ..-.+.+-++|+++ |.++.-+.
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~~ 191 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQAG 191 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEecC
Confidence 44433 34468899999997 99987743
No 439
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=93.84 E-value=0.64 Score=42.50 Aligned_cols=73 Identities=21% Similarity=0.216 Sum_probs=53.7
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchH-HHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~ 282 (388)
+|.++|-|.+|.-.++=+...|+ .|.+.++++++ .++++..|+...- ...+.+. ..|+||-|++.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~-----~aDvVitmv~~ 67 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA-----EADVVITMLPD 67 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH-----hCCEEEEecCC
Confidence 57888999999999988888999 99999999999 8888888875431 1122221 56777777776
Q ss_pred HHHHHHHH
Q 016507 283 ASLVQEAY 290 (388)
Q Consensus 283 ~~~~~~~~ 290 (388)
+..+...+
T Consensus 68 ~~~V~~V~ 75 (286)
T COG2084 68 DAAVRAVL 75 (286)
T ss_pred HHHHHHHH
Confidence 65554443
No 440
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.39 Score=43.77 Aligned_cols=79 Identities=18% Similarity=0.099 Sum_probs=48.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-E--EcCCCCCCccHHHHHHhhc--C
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMT--D 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~ 270 (388)
...++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+ +..+... . .|-.+ .+.+.+.+.+.. .
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhc
Confidence 3468999987 9999999998888899 888888766554322 2223322 1 23222 122333333221 1
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
++.|++|.+.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (274)
T PRK07775 86 GEIEVLVSGAGD 97 (274)
T ss_pred CCCCEEEECCCc
Confidence 378999998874
No 441
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.26 Score=44.34 Aligned_cols=75 Identities=19% Similarity=0.205 Sum_probs=46.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhc--CCCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMT--DGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~~dvv 276 (388)
++.+|||+|+ |.+|...++.+...|+ +|++++++++... .-.+.. ..|-.+ .+...+.+.+.. .+++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999987 9999999998888899 8999988754321 111111 123322 122222222221 1379999
Q ss_pred EEccC
Q 016507 277 FECVG 281 (388)
Q Consensus 277 id~~g 281 (388)
|++.|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99887
No 442
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.78 E-value=0.47 Score=42.87 Aligned_cols=94 Identities=22% Similarity=0.257 Sum_probs=60.8
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc----CCc---EEEcCCCCCCccHHHHHHhhcCCC
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSVSQIIIDMTDGG 272 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~~~~g~ 272 (388)
.++.+||-+|.|. |..+..+++. |. +|++++.+++..+.+++. |.. .++.. +.. .+.....+.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~-~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQ-DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHH-HHhhhcCCC
Confidence 4567888888755 6777777775 77 999999999888777653 321 12221 121 122222348
Q ss_pred ccEEEEccC-----C-HHHHHHHHHHhhcCCceEEEEc
Q 016507 273 ADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 273 ~dvvid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 304 (388)
||+|+.... . ...+..+.+.|+++ |.++.+-
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 999985422 2 23478899999997 9987653
No 443
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.75 E-value=0.74 Score=43.81 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=32.0
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
.+.+|||+|+|++|..+++.+...|..++..+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 347899999999999999999999999999998765
No 444
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=93.74 E-value=0.43 Score=44.26 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHH---HHHHHcC-Cc---EEEcCCCCCCccHHHHHHhhcCCC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF---EIGKRFG-VT---EFVNSKNCGDKSVSQIIIDMTDGG 272 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~---~~~~~lg-a~---~v~~~~~~~~~~~~~~i~~~~~g~ 272 (388)
.+.+|+|+|| |-||...+..+-..|+ +|.++.|+++.. +.++++. +. .++..+=.+...|.+.+. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----C
Confidence 5679999998 9999999999999999 999999988763 3466664 22 233222111233444432 7
Q ss_pred ccEEEEccC
Q 016507 273 ADYCFECVG 281 (388)
Q Consensus 273 ~dvvid~~g 281 (388)
.|.||.+..
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 899998765
No 445
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.73 E-value=0.24 Score=39.46 Aligned_cols=78 Identities=21% Similarity=0.282 Sum_probs=49.2
Q ss_pred CEEEEEccchhHHHHHHHHHHcCCcEEEEEc-CCchHHHHHHH-cCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 203 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
-+|-|+|+|.+|......++..|+ .|..+. ++.++.+.+.. ++...+.+..+ .. ...|++|-++
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~iav 76 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIAV 76 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-S
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEEe
Confidence 479999999999999999999998 777764 45555555554 34433332211 11 2789999999
Q ss_pred CCHHHHHHHHHHhhc
Q 016507 281 GLASLVQEAYACCRK 295 (388)
Q Consensus 281 g~~~~~~~~~~~l~~ 295 (388)
..+. +....+.|..
T Consensus 77 pDda-I~~va~~La~ 90 (127)
T PF10727_consen 77 PDDA-IAEVAEQLAQ 90 (127)
T ss_dssp -CCH-HHHHHHHHHC
T ss_pred chHH-HHHHHHHHHH
Confidence 9886 7777777765
No 446
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.72 E-value=0.41 Score=44.15 Aligned_cols=82 Identities=20% Similarity=0.111 Sum_probs=48.8
Q ss_pred CCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchH-HH----HHHHcCCcE-E--EcCCCCCCccHHHHHHhh
Q 016507 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE----IGKRFGVTE-F--VNSKNCGDKSVSQIIIDM 268 (388)
Q Consensus 198 ~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~lga~~-v--~~~~~~~~~~~~~~i~~~ 268 (388)
...++.++||+|+ |.+|...+..+...|+ +|+.+.++++. .+ .++..+... + .|-.+ ...+.+.+.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~i 118 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD--EAFCKDAVEET 118 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHH
Confidence 3445788999997 9999998888887899 88888776432 21 222223322 2 23222 12222222222
Q ss_pred c--CCCccEEEEccCC
Q 016507 269 T--DGGADYCFECVGL 282 (388)
Q Consensus 269 ~--~g~~dvvid~~g~ 282 (388)
. .+++|++|.+.|.
T Consensus 119 ~~~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 119 VRELGRLDILVNNAAF 134 (290)
T ss_pred HHHcCCCCEEEECCcc
Confidence 1 1378999998774
No 447
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.71 E-value=0.45 Score=44.54 Aligned_cols=89 Identities=22% Similarity=0.237 Sum_probs=60.5
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
..|.++.|+|.|.||.+.++.++..|+ +|+..++++. .+..+..++.++ . +.+.+. ..|++.-.
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~-l~ell~-----~sDii~l~ 207 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------D-LDELLA-----ESDIISLH 207 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------c-HHHHHH-----hCCEEEEe
Confidence 358999999999999999999999999 9999988775 344344444432 1 333332 56777554
Q ss_pred cC-CHHH----HHHHHHHhhcCCceEEEEcc
Q 016507 280 VG-LASL----VQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 280 ~g-~~~~----~~~~~~~l~~~~G~~v~~g~ 305 (388)
.+ ++.+ -...++.|+++ +.+|.++.
T Consensus 208 ~Plt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 208 CPLTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CCCChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 44 3321 14667788886 77777764
No 448
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.70 E-value=0.38 Score=47.41 Aligned_cols=71 Identities=25% Similarity=0.342 Sum_probs=48.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch-HH----HHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KF----EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~----~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dv 275 (388)
.+.+|+|+|+|.+|+.++..+...|+ +|++++..+. .. +.+.++|...... +. .+ .. .+++|+
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~-~~---~~---~~----~~~~d~ 71 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVLG-EY---PE---EF----LEGVDL 71 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEeC-Cc---ch---hH----hhcCCE
Confidence 46889999998899999999999999 8999988642 11 3344556653322 21 11 11 137999
Q ss_pred EEEccCCH
Q 016507 276 CFECVGLA 283 (388)
Q Consensus 276 vid~~g~~ 283 (388)
|+.+.|..
T Consensus 72 vv~~~g~~ 79 (450)
T PRK14106 72 VVVSPGVP 79 (450)
T ss_pred EEECCCCC
Confidence 99988854
No 449
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.68 E-value=0.75 Score=42.37 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=67.0
Q ss_pred ccccchhhhhHHHHHHhcCC-CCCCEEEEEc-cchhHHHHHHHHHHcCCcEEEEEc-CCchHHHHHHHcCCcEEEcCCCC
Q 016507 180 CLLSCGVSTGVGAAWRTANV-EVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNC 256 (388)
Q Consensus 180 a~~~~~~~ta~~~l~~~~~~-~~~~~VlI~G-ag~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~lga~~v~~~~~~ 256 (388)
..+||+....+. +.+..++ -.|.+|+|+| .+.+|.-++.++...|+ .|++.. ++.
T Consensus 136 ~~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~-------------------- 193 (296)
T PRK14188 136 ALVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR-------------------- 193 (296)
T ss_pred CCcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC--------------------
Confidence 356666555555 3444444 4799999999 59999999999988899 888874 221
Q ss_pred CCccHHHHHHhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccCC
Q 016507 257 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 257 ~~~~~~~~i~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
++.+.++ ..|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 194 ---~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 ---DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred ---CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1222221 6799999999988565554 8887 8888998643
No 450
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=93.66 E-value=1.1 Score=39.22 Aligned_cols=104 Identities=20% Similarity=0.236 Sum_probs=62.1
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcCCcEEE------cC-CCCCCccHHHHHHhhc-
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV------NS-KNCGDKSVSQIIIDMT- 269 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~------~~-~~~~~~~~~~~i~~~~- 269 (388)
..++.+||+.|.|. |.-++-+|. .|+ .|++++.++.-.+.+. +.+..... .. ......-....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999998765 777777775 699 9999999998777642 23321100 00 0000000000011111
Q ss_pred --CCCccEEEEccCC--------HHHHHHHHHHhhcCCceEEEEccC
Q 016507 270 --DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 270 --~g~~dvvid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.+.||.|+|+..- ...+..+.++|+++ |+++.++..
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1369999997541 22377899999998 987776653
No 451
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.66 E-value=0.37 Score=43.64 Aligned_cols=79 Identities=20% Similarity=0.364 Sum_probs=47.2
Q ss_pred CCCEEEEEcc---chhHHHHHHHHHHcCCcEEEEEcCC---chHHHH-HHHcCCcEE--EcCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI---SEKFEI-GKRFGVTEF--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~-~~~lga~~v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.++||+|+ +++|.+.++.+...|+ +|+.+.+. +++.+. .++++.... .|-.+ .++..+.+.+...
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence 4688999984 5899998888888899 88877543 233322 233443222 23332 2333333333322
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
|++|+++++.|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 479999998763
No 452
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=93.65 E-value=0.52 Score=44.90 Aligned_cols=100 Identities=22% Similarity=0.249 Sum_probs=62.9
Q ss_pred CEEEEEcc-chhHHHHHHHHHHc--CCcEEEEEc--CCchHH-HHHHHcCCcEEEcCCCCCCccHH--------------
Q 016507 203 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVD--VISEKF-EIGKRFGVTEFVNSKNCGDKSVS-------------- 262 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~--~~~~~~-~~~~~lga~~v~~~~~~~~~~~~-------------- 262 (388)
.+|.|+|+ |++|..++.+.+.. .+ +|+++. ++.+++ +.+++++...+.-.++.....+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 47899997 99999999988754 45 777774 333333 34556777765543320001111
Q ss_pred HHHHhhcCC-CccEEEEccCCHHHHHHHHHHhhcCCceEEEEcc
Q 016507 263 QIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 263 ~~i~~~~~g-~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
+.+.++... .+|+|+.++++..++...+..++. |+-+.+++
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~a--GK~VaLAN 122 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRA--GKRIALAN 122 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHC--CCcEEEeC
Confidence 112222222 689999999988778888888887 55565644
No 453
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=93.65 E-value=2.8 Score=37.63 Aligned_cols=98 Identities=13% Similarity=0.215 Sum_probs=62.4
Q ss_pred HhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCC-cEEEcCCCCCCccHHHHHHhhcCCCc
Q 016507 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
+.....++.+||-+|.|. |..+..+++ .|. +|++++.+++..+.+++... ..++..+- ..+ .+..+.|
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~~f 104 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATATF 104 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCCcE
Confidence 334444678899998765 666655654 466 99999999998888876532 12221111 111 1122379
Q ss_pred cEEEEccCC------HHHHHHHHHHhhcCCceEEEEc
Q 016507 274 DYCFECVGL------ASLVQEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 274 dvvid~~g~------~~~~~~~~~~l~~~~G~~v~~g 304 (388)
|+|+....- ...+.++.+.++++ |.++...
T Consensus 105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~ 140 (251)
T PRK10258 105 DLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTT 140 (251)
T ss_pred EEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence 999865431 23478889999997 9888664
No 454
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=93.63 E-value=0.68 Score=43.37 Aligned_cols=99 Identities=19% Similarity=0.268 Sum_probs=59.7
Q ss_pred EEEEEccchhHHHHHHHHHHcC----CcEEEEEcC--CchHHHHHHHcCCc--------------EEEcCCCCCCccH-H
Q 016507 204 TVVIFGLGSIGLAVAEGARLCG----ATRIIGVDV--ISEKFEIGKRFGVT--------------EFVNSKNCGDKSV-S 262 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g----~~~Vi~~~~--~~~~~~~~~~lga~--------------~v~~~~~~~~~~~-~ 262 (388)
+|.|+|+|.+|..+++.+...+ . +|+++.. +.+...++.++.-. .+++-+. ..-+ .
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~--i~v~~~ 77 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDC--IRVLHS 77 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeE--EEEEEc
Confidence 4789999999999999877543 5 6666633 22333444333210 0111100 0000 0
Q ss_pred HHHHhhcC--CCccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 263 QIIIDMTD--GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 263 ~~i~~~~~--g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
....++.. .++|+||+|+|.....+.+...+..| +..+.++..
T Consensus 78 ~~p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP 122 (325)
T TIGR01532 78 PTPEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP 122 (325)
T ss_pred CChhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence 01111222 28999999999988788888999987 888888764
No 455
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=93.63 E-value=0.67 Score=42.81 Aligned_cols=57 Identities=21% Similarity=0.183 Sum_probs=46.8
Q ss_pred HHhcCCCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCC---chHHHHHHHcCCcEEE
Q 016507 194 WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI---SEKFEIGKRFGVTEFV 251 (388)
Q Consensus 194 ~~~~~~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~~~~lga~~v~ 251 (388)
.....+.||.++||-.. |.+|...+.++...|+ +++++... .+|...++.+|+..+.
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 45567899999999985 9999999999999999 88887553 3778888889987554
No 456
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.58 E-value=0.27 Score=45.51 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=57.5
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCC-CccHHHHHHhhcCCCccEEEEccCC
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG-DKSVSQIIIDMTDGGADYCFECVGL 282 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~-~~~~~~~i~~~~~g~~dvvid~~g~ 282 (388)
+|+|+|+|.+|.+.+..+...|. +|..+++++++.+.+++.|... +..+.. .........+. +.+|+||-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999988888777787 8999998777777776656421 100000 00000001111 379999999886
Q ss_pred HHHHHHHHHHhhc---CCceEEEEc
Q 016507 283 ASLVQEAYACCRK---GWGKTIVLG 304 (388)
Q Consensus 283 ~~~~~~~~~~l~~---~~G~~v~~g 304 (388)
.. +..+++.+.+ ....++.+.
T Consensus 77 ~~-~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred cc-HHHHHHHHhhhcCCCCEEEEec
Confidence 65 4555554443 114555544
No 457
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.56 E-value=1 Score=42.28 Aligned_cols=94 Identities=19% Similarity=0.136 Sum_probs=62.0
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HcCCcEEEEEcCCchHHHHH-HHc----CCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRF----GVTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~-~~l----ga~~v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
+...+++|+|+|..|.+.+..+. ..+.++|.+..++.++.+.+ +.+ |.. +... .+..+.+. +.
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av~-----~a 195 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAMS-----GA 195 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHhc-----cC
Confidence 34568999999999988777665 57877999999998876543 333 432 2211 22333332 78
Q ss_pred cEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 274 dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
|+|+.|+++...+ -..+.++++ -++..+|..
T Consensus 196 DiVvtaT~s~~p~-i~~~~l~~g-~~i~~vg~~ 226 (326)
T TIGR02992 196 DIIVTTTPSETPI-LHAEWLEPG-QHVTAMGSD 226 (326)
T ss_pred CEEEEecCCCCcE-ecHHHcCCC-cEEEeeCCC
Confidence 9999999875421 123457776 777778753
No 458
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.55 E-value=0.43 Score=42.36 Aligned_cols=78 Identities=23% Similarity=0.347 Sum_probs=47.4
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHcCCcEEEEE-cCCchHHHHHHH----cCCcE-EE--cCCCCCCccHHHHHHhhcC--
Q 016507 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGKR----FGVTE-FV--NSKNCGDKSVSQIIIDMTD-- 270 (388)
Q Consensus 202 ~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~~----lga~~-v~--~~~~~~~~~~~~~i~~~~~-- 270 (388)
+.++||+|+ |.+|...+..+...|+ +|+++ ++++++.+.+.. .+... ++ |-.+ ...+.+.+.+...
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVEKF 81 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence 468999987 9999998888777899 78887 877665433222 22211 22 3222 1222222222211
Q ss_pred CCccEEEEccCC
Q 016507 271 GGADYCFECVGL 282 (388)
Q Consensus 271 g~~dvvid~~g~ 282 (388)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (247)
T PRK05565 82 GKIDILVNNAGI 93 (247)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 459
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.54 E-value=0.48 Score=42.00 Aligned_cols=79 Identities=25% Similarity=0.321 Sum_probs=47.0
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch-HHH-H---HHHcCCcE-EE--cCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE-I---GKRFGVTE-FV--NSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~-~---~~~lga~~-v~--~~~~~~~~~~~~~i~~~~~- 270 (388)
.+.++||+|+ |.+|...+..+...|+ +|+++.++.. +.+ . ++..+... .+ |-.+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3568999987 9999999999888899 7766655443 222 1 22223222 22 3333 1223333333222
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
+++|+++.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 278999998874
No 460
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.54 E-value=1.4 Score=43.10 Aligned_cols=103 Identities=18% Similarity=0.263 Sum_probs=64.8
Q ss_pred HhcCCCCCCEEEEEccchhHHHHHHHHHHcC-CcEEEEEcCCchHHHHHHH----cCCcE--EEcCCCCCCccHHHHHHh
Q 016507 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIIID 267 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~ 267 (388)
...++++|++||=.|+|+ |..++.++..++ -.+|++++.++++++.+++ +|.+. ++..+. ..+ ..
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~ 302 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TE 302 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hh
Confidence 346788999988888755 444555566552 2389999999999877754 56643 222211 112 11
Q ss_pred hcCCCccEEEE---ccCCH-------------------------HHHHHHHHHhhcCCceEEEEccC
Q 016507 268 MTDGGADYCFE---CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 268 ~~~g~~dvvid---~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
...+.||.|+- |+|.. ..+..+++.++++ |.++....+
T Consensus 303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 22347999974 54431 1256788999997 987766543
No 461
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=93.53 E-value=0.63 Score=43.75 Aligned_cols=95 Identities=14% Similarity=0.076 Sum_probs=62.2
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HcCCcEEEEEcCCchHHHHH-H---HcCCcEEEcCCCCCCccHHHHHHhhcCCCcc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-K---RFGVTEFVNSKNCGDKSVSQIIIDMTDGGAD 274 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~-~---~lga~~v~~~~~~~~~~~~~~i~~~~~g~~d 274 (388)
+...++.|+|+|..|.+.++.+. ....++|.+.++++++.+.+ . ++|..... . .+..+.+ .+.|
T Consensus 126 ~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~-~-----~~~~eav-----~~aD 194 (325)
T TIGR02371 126 KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRA-A-----TDPREAV-----EGCD 194 (325)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEE-e-----CCHHHHh-----ccCC
Confidence 44578999999999988665544 45667999999998886543 2 33432111 1 1233333 2789
Q ss_pred EEEEccCCHHHHHHHHHHhhcCCceEEEEccCC
Q 016507 275 YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 275 vvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
+|+-|+++...+ -..+.++++ -+++.+|...
T Consensus 195 iVitaT~s~~P~-~~~~~l~~g-~~v~~vGs~~ 225 (325)
T TIGR02371 195 ILVTTTPSRKPV-VKADWVSEG-THINAIGADA 225 (325)
T ss_pred EEEEecCCCCcE-ecHHHcCCC-CEEEecCCCC
Confidence 999988765412 234567887 8888998753
No 462
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.52 E-value=0.44 Score=42.55 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=47.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEE-EcCCchHHHH----HHHcCCcE-E--EcCCCCCCccHHHHHHhhcC-
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEI----GKRFGVTE-F--VNSKNCGDKSVSQIIIDMTD- 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~-~~~~~~~~~~----~~~lga~~-v--~~~~~~~~~~~~~~i~~~~~- 270 (388)
++.++||+|+ |.+|...+..+...|+ +|++ ..+++++.+. ++..+... . .|-.+ .+++...+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4678999987 9999999998888899 6665 4555554332 22234322 2 23222 1233333333221
Q ss_pred -CCccEEEEccCC
Q 016507 271 -GGADYCFECVGL 282 (388)
Q Consensus 271 -g~~dvvid~~g~ 282 (388)
+++|++|++.|.
T Consensus 80 ~~~id~vi~~ag~ 92 (250)
T PRK08063 80 FGRLDVFVNNAAS 92 (250)
T ss_pred cCCCCEEEECCCC
Confidence 378999998873
No 463
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.50 E-value=0.44 Score=46.11 Aligned_cols=74 Identities=19% Similarity=0.288 Sum_probs=47.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH-HcC--CcE-EEcCCCCCCccHHHHHHhhcCCCccE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--VTE-FVNSKNCGDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lg--a~~-v~~~~~~~~~~~~~~i~~~~~g~~dv 275 (388)
.+.+|+|+|+ |.+|.+.++.+...|+ +|+++++++++.+... ..+ ... ..|-.+ . +.+.+.. +++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~---~~v~~~l-~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---E---AALAELL-EKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---H---HHHHHHh-CCCCE
Confidence 4679999987 9999999998888899 8999888766543221 111 111 123332 1 2233322 37999
Q ss_pred EEEccCC
Q 016507 276 CFECVGL 282 (388)
Q Consensus 276 vid~~g~ 282 (388)
+|.+.|.
T Consensus 249 LInnAGi 255 (406)
T PRK07424 249 LIINHGI 255 (406)
T ss_pred EEECCCc
Confidence 9988763
No 464
>PRK04266 fibrillarin; Provisional
Probab=93.47 E-value=1.7 Score=38.52 Aligned_cols=101 Identities=13% Similarity=0.188 Sum_probs=61.1
Q ss_pred HhcCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-----CCcEEEcCCCCCCccHHHHHHhhc
Q 016507 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-----GVTEFVNSKNCGDKSVSQIIIDMT 269 (388)
Q Consensus 195 ~~~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-----ga~~v~~~~~~~~~~~~~~i~~~~ 269 (388)
+...+++|++||=+|+|+ |..+..+++..+-.+|++++.+++.++.+.+. .+. .+..+. ... .....+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~-~i~~D~---~~~-~~~~~l- 138 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNII-PILADA---RKP-ERYAHV- 138 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcE-EEECCC---CCc-chhhhc-
Confidence 457889999999988754 44556667665433899999999766644322 122 221111 110 000011
Q ss_pred CCCccEEEEccCCHH----HHHHHHHHhhcCCceEEEE
Q 016507 270 DGGADYCFECVGLAS----LVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 270 ~g~~dvvid~~g~~~----~~~~~~~~l~~~~G~~v~~ 303 (388)
.+.+|+|+.-...+. .+..+.+.|+++ |+++..
T Consensus 139 ~~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 139 VEKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 126999996544331 257888899998 998874
No 465
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.47 E-value=0.54 Score=48.14 Aligned_cols=95 Identities=9% Similarity=0.081 Sum_probs=67.1
Q ss_pred CEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEccCC
Q 016507 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 282 (388)
Q Consensus 203 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~g~ 282 (388)
+.|+|.|.|.+|...++.++..|. ++++++.++++.+.+++.|...++-. ..-.+.+++..-..+|.++-+++.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GD-----at~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGD-----ATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEee-----CCCHHHHHhcCCccCCEEEEEeCC
Confidence 579999999999999999999999 89999999999999999887654421 112333444322289999999998
Q ss_pred HHHHHHH---HHHhhcCCceEEEEc
Q 016507 283 ASLVQEA---YACCRKGWGKTIVLG 304 (388)
Q Consensus 283 ~~~~~~~---~~~l~~~~G~~v~~g 304 (388)
+..-... .+...+. .+++.-.
T Consensus 475 ~~~n~~i~~~~r~~~p~-~~IiaRa 498 (601)
T PRK03659 475 PEDTMKIVELCQQHFPH-LHILARA 498 (601)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEEEe
Confidence 7633333 3334443 5555443
No 466
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.43 E-value=0.54 Score=43.95 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=31.4
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHH
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF 239 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 239 (388)
.|.+|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4679999987 9999999998888899 888877766543
No 467
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=93.42 E-value=0.3 Score=46.19 Aligned_cols=34 Identities=26% Similarity=0.196 Sum_probs=29.5
Q ss_pred CEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCch
Q 016507 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 237 (388)
Q Consensus 203 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 237 (388)
.+|||+|+ |.+|..+++.+...|+ +|+++++..+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCc
Confidence 37999987 9999999999988999 8999987653
No 468
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.41 E-value=0.3 Score=45.45 Aligned_cols=94 Identities=18% Similarity=0.101 Sum_probs=55.7
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHH-cCCcEEEcCCCCCCccHHHHHHhhc---CCCccEEEEc
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMT---DGGADYCFEC 279 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~---~g~~dvvid~ 279 (388)
+|+|+|+|++|....-.+...|. .|..+++.+++.+.+++ -|.. +.+... .... .+...+ .+.+|+||-|
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~---~~~~-~~~~~~~~~~~~~D~viv~ 77 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ---ASLY-AIPAETADAAEPIHRLLLA 77 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc---ceee-ccCCCCcccccccCEEEEE
Confidence 69999999999877776667788 89999998777776654 3432 222111 0000 000001 1278999988
Q ss_pred cCCHHHHHHHH----HHhhcCCceEEEEcc
Q 016507 280 VGLASLVQEAY----ACCRKGWGKTIVLGV 305 (388)
Q Consensus 280 ~g~~~~~~~~~----~~l~~~~G~~v~~g~ 305 (388)
+=+.. ...++ ..+.++ ..++.+.+
T Consensus 78 vK~~~-~~~al~~l~~~l~~~-t~vv~lQN 105 (305)
T PRK05708 78 CKAYD-AEPAVASLAHRLAPG-AELLLLQN 105 (305)
T ss_pred CCHHh-HHHHHHHHHhhCCCC-CEEEEEeC
Confidence 75543 33444 344554 66665543
No 469
>PRK13984 putative oxidoreductase; Provisional
Probab=93.40 E-value=0.37 Score=49.45 Aligned_cols=78 Identities=21% Similarity=0.253 Sum_probs=53.6
Q ss_pred CCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch---------------------HHHHHHHcCCcEEEcCCCCC
Q 016507 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCG 257 (388)
Q Consensus 199 ~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~ 257 (388)
.+.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. ..+.++++|++..++..-..
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4568899999999999999999999999 8888865431 23556677877655533100
Q ss_pred CccHHHHHHhhcCCCccEEEEccCC
Q 016507 258 DKSVSQIIIDMTDGGADYCFECVGL 282 (388)
Q Consensus 258 ~~~~~~~i~~~~~g~~dvvid~~g~ 282 (388)
+..+ +.++ .+||.||-++|.
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 0112 2221 279999999985
No 470
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.36 E-value=0.28 Score=44.41 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=48.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcE-EEcCCCCCCccHHHHHHhhcC--CCccEE
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~--g~~dvv 276 (388)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+. ..+.. ..|-.+ .+.+.+.+.+... +++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 9999999999888999 89888877654321 11111 223333 1233333333221 378999
Q ss_pred EEccCC
Q 016507 277 FECVGL 282 (388)
Q Consensus 277 id~~g~ 282 (388)
+++.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 998873
No 471
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.35 E-value=0.28 Score=43.68 Aligned_cols=79 Identities=15% Similarity=0.142 Sum_probs=46.8
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEc-CCch-HHHHHH---HcCCcEE---EcCCCCCCccHHHHHHhhc--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISE-KFEIGK---RFGVTEF---VNSKNCGDKSVSQIIIDMT-- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~-~~~~~~---~lga~~v---~~~~~~~~~~~~~~i~~~~-- 269 (388)
++.++||+|+ |.+|...++.+...|+ +|++.. +++. ..+.+. ..+.... .|-.+ .+++.+.+.+..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAE 78 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3578899987 9999999999988899 676643 3332 222232 3344332 23332 122333232221
Q ss_pred CCCccEEEEccCC
Q 016507 270 DGGADYCFECVGL 282 (388)
Q Consensus 270 ~g~~dvvid~~g~ 282 (388)
.++.|+++++.|.
T Consensus 79 ~~~id~li~~ag~ 91 (246)
T PRK12938 79 VGEIDVLVNNAGI 91 (246)
T ss_pred hCCCCEEEECCCC
Confidence 1379999999975
No 472
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.35 E-value=0.72 Score=45.23 Aligned_cols=43 Identities=28% Similarity=0.327 Sum_probs=35.3
Q ss_pred EEEEEc-cchhHHHHHHHHHHcCCcEEEEEcCCchHH-HHHHHcCC
Q 016507 204 TVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKF-EIGKRFGV 247 (388)
Q Consensus 204 ~VlI~G-ag~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~lga 247 (388)
+|+|+| .|.+|.+.+..++..|. +|+++++++++. +.+.++|+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCC
Confidence 688998 59999999999999998 899999887764 55666665
No 473
>PRK09135 pteridine reductase; Provisional
Probab=93.33 E-value=0.51 Score=41.94 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=29.6
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
.+.+|||+|+ |.+|..+++.+...|+ +|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4578999997 9999999888888899 899888753
No 474
>PLN02735 carbamoyl-phosphate synthase
Probab=93.31 E-value=1.2 Score=48.82 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=57.3
Q ss_pred hhhhHHHHHHhcCCCCCCEEEEEccchh-----------HHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE-cC
Q 016507 186 VSTGVGAAWRTANVEVGSTVVIFGLGSI-----------GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NS 253 (388)
Q Consensus 186 ~~ta~~~l~~~~~~~~~~~VlI~Gag~v-----------G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~ 253 (388)
...||.+.....+-..-.+|||+|+|++ |..++..++..|+ +|+.+++++........+ +|+++ .+
T Consensus 7 ~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi~p 84 (1102)
T PLN02735 7 VTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYIAP 84 (1102)
T ss_pred ceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEeCC
Confidence 3445654432222222369999998874 5568888899999 999999877532211112 44433 22
Q ss_pred CCCCCccHHHHHHhhcCC-CccEEEEccCCHHHHHHHH
Q 016507 254 KNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 290 (388)
Q Consensus 254 ~~~~~~~~~~~i~~~~~g-~~dvvid~~g~~~~~~~~~ 290 (388)
.+ .+ .+.++... ++|.|+-+.|+...+..+.
T Consensus 85 ~~---~e---~v~~ii~~e~~D~Iip~~gg~~gl~la~ 116 (1102)
T PLN02735 85 MT---PE---LVEQVIAKERPDALLPTMGGQTALNLAV 116 (1102)
T ss_pred CC---HH---HHHHHHHHhCCCEEEECCCchhhHHHHH
Confidence 22 22 23332223 8999999998876554443
No 475
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.31 E-value=0.67 Score=44.34 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=31.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
.+.+|+|+|+|++|..+++.+...|..+++.+|.+.
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ 75 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDT 75 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence 456899999999999999999999998999998763
No 476
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.31 E-value=0.28 Score=44.24 Aligned_cols=73 Identities=15% Similarity=0.084 Sum_probs=50.6
Q ss_pred EEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC-CccEEEEccCC
Q 016507 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL 282 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-~~dvvid~~g~ 282 (388)
+|||.|+.+-|..++..+...|. +|+++..++.+.+.+...|...+.--.- +..+ +.++... ++|+|+|++-.
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l-~~~~----l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGAL-DPQE----LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCC-CHHH----HHHHHHhcCCCEEEEcCCH
Confidence 68999884459888877777898 8999999888877777776555542211 1122 3333333 89999998763
No 477
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.28 E-value=0.57 Score=42.25 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=47.3
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcC-CchHHHH-HHH----cCCc-EE--EcCCCCCCccHHHHHHhhcC
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI-GKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD 270 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~-~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~ 270 (388)
++.++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+. ++. .+.. .. .|-.+ .+.+.+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE--PETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 5789999987 9999999998888999 7877754 4444332 222 2322 12 23332 1233333333221
Q ss_pred --CCccEEEEccC
Q 016507 271 --GGADYCFECVG 281 (388)
Q Consensus 271 --g~~dvvid~~g 281 (388)
+++|+++++.|
T Consensus 84 ~~g~id~lv~nAg 96 (260)
T PRK08416 84 DFDRVDFFISNAI 96 (260)
T ss_pred hcCCccEEEECcc
Confidence 37999999875
No 478
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.28 E-value=1.1 Score=41.66 Aligned_cols=88 Identities=25% Similarity=0.279 Sum_probs=59.9
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 279 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~ 279 (388)
-.+.+|.|+|-|.+|.+.++.++..|+ +|++..+.....+.+...|+. +. ++.+.+. ..|+|+-+
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaak-----~ADVV~ll 78 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAVR-----TAQVVQML 78 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHHh-----cCCEEEEe
Confidence 367899999999999999999999999 888876655555556666663 21 2333332 67999988
Q ss_pred cCCHHH---H-HHHHHHhhcCCceEEEEc
Q 016507 280 VGLASL---V-QEAYACCRKGWGKTIVLG 304 (388)
Q Consensus 280 ~g~~~~---~-~~~~~~l~~~~G~~v~~g 304 (388)
.+.+.. + ...+..+++ |.++.++
T Consensus 79 LPd~~t~~V~~~eil~~MK~--GaiL~f~ 105 (335)
T PRK13403 79 LPDEQQAHVYKAEVEENLRE--GQMLLFS 105 (335)
T ss_pred CCChHHHHHHHHHHHhcCCC--CCEEEEC
Confidence 876432 1 235556666 4555554
No 479
>PLN02823 spermine synthase
Probab=93.25 E-value=0.79 Score=43.16 Aligned_cols=101 Identities=18% Similarity=0.130 Sum_probs=60.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc-CCc-EEEcCCCC--CCccHHHHHHhhcCCCccEE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EFVNSKNC--GDKSVSQIIIDMTDGGADYC 276 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~-~v~~~~~~--~~~~~~~~i~~~~~g~~dvv 276 (388)
...+|||+|+|. |..+..+++..+..+|++++.+++-.++++++ +.. ..++.... ...+-.+.+. ...+.||+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCccEE
Confidence 457899998764 55666777877766999999999998888874 211 01110000 0022233343 233489999
Q ss_pred E-EccC----C-------HHHHH-HHHHHhhcCCceEEEEc
Q 016507 277 F-ECVG----L-------ASLVQ-EAYACCRKGWGKTIVLG 304 (388)
Q Consensus 277 i-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~g 304 (388)
| |+.. + ..-++ .+.+.|+++ |.++.-.
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 5 4221 1 12244 678899997 9887654
No 480
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=93.24 E-value=0.26 Score=46.53 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=30.2
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
++.+|||+|+ |.+|...++.+...|+ +|+++++.+
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~ 40 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRS 40 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEeccc
Confidence 4678999987 9999999999998999 899887654
No 481
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=93.24 E-value=0.47 Score=40.48 Aligned_cols=92 Identities=16% Similarity=0.177 Sum_probs=55.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHH----HcCCcE--EEcCCCCCCccHHHHHHhhcCCCcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIIDMTDGGAD 274 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~~~~g~~d 274 (388)
++++||=+|.|. |..++.+++.....+|++++.+++..+.++ +++.+. ++. .+..+ + ...+.||
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~------~d~~~-~--~~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVN------GRAED-F--QHEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEe------cchhh-c--cccCCcc
Confidence 378899888644 455555555543338999999987666554 345432 222 12221 1 1123899
Q ss_pred EEEEccC--CHHHHHHHHHHhhcCCceEEEE
Q 016507 275 YCFECVG--LASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 275 vvid~~g--~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
+|+-..- -...++.+.+.|+++ |.++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 9976431 123356778889997 998866
No 482
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=93.23 E-value=0.56 Score=40.95 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=60.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc-hHHH-HHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEE
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 278 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid 278 (388)
.|.+|||+|+|.+|.-=+.++-..|+ +|+++.... .... +....+... +. +. +.... + .++++||-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~-~~-~~-----~~~~~--~--~~~~lvia 78 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKW-IE-RE-----FDAED--L--DDAFLVIA 78 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcch-hh-cc-----cChhh--h--cCceEEEE
Confidence 57799999999999999999999999 888875544 2222 222222211 11 11 11110 1 15899999
Q ss_pred ccCCHHHHHHHHHHhhcCCceEEEEccCC
Q 016507 279 CVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 279 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
+++....-+...+..... +.++.....+
T Consensus 79 At~d~~ln~~i~~~a~~~-~i~vNv~D~p 106 (210)
T COG1648 79 ATDDEELNERIAKAARER-RILVNVVDDP 106 (210)
T ss_pred eCCCHHHHHHHHHHHHHh-CCceeccCCc
Confidence 999988455666666664 8888877643
No 483
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.21 E-value=0.87 Score=42.88 Aligned_cols=86 Identities=28% Similarity=0.183 Sum_probs=57.3
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.|.+|.|+|.|.+|...++.++..|. +|++.+++++..... .. .. .++.+.+. ..|+|+-+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~----~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YK----DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----cc----CCHHHHHh-----cCCEEEEeC
Confidence 56789999999999999999999999 999998876542210 00 00 12332221 678888887
Q ss_pred CCHHH-----HHHHHHHhhcCCceEEEEcc
Q 016507 281 GLASL-----VQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 281 g~~~~-----~~~~~~~l~~~~G~~v~~g~ 305 (388)
+.... ....+..++++ ..+|.++.
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 75431 23556677775 66776653
No 484
>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=93.20 E-value=0.46 Score=43.31 Aligned_cols=40 Identities=30% Similarity=0.265 Sum_probs=33.6
Q ss_pred cCCCCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 197 ~~~~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
..--.++-|+|+|+|++|..++.++...|++++-.++-+.
T Consensus 69 m~kl~~syVVVVG~GgVGSwv~nmL~RSG~qKi~iVDfdq 108 (430)
T KOG2018|consen 69 MEKLTNSYVVVVGAGGVGSWVANMLLRSGVQKIRIVDFDQ 108 (430)
T ss_pred HHHhcCcEEEEEecCchhHHHHHHHHHhcCceEEEechhh
Confidence 3344678899999999999999999999999888887554
No 485
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=93.18 E-value=0.95 Score=40.63 Aligned_cols=102 Identities=16% Similarity=0.237 Sum_probs=64.4
Q ss_pred HHhcCCCCCCEEEEEccchhHHHHHHHHHHc--CCcEEEEEcCCchHHHHHHH----cCCcEEEcCCCCCCccHHHHHHh
Q 016507 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 267 (388)
Q Consensus 194 ~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~ 267 (388)
....+.....+||-+|. .+|..++.+|+.+ +. +|+.++.++++.+.+++ .|...-++... .+..+.+.+
T Consensus 72 ~~l~~~~~ak~iLEiGT-~~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~ 146 (247)
T PLN02589 72 NMLLKLINAKNTMEIGV-YTGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQ 146 (247)
T ss_pred HHHHHHhCCCEEEEEeC-hhhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHH
Confidence 33445566778999986 4577777788765 34 89999999988777654 45433223222 334455555
Q ss_pred hc-----CCCccEEE-EccCCH--HHHHHHHHHhhcCCceEE
Q 016507 268 MT-----DGGADYCF-ECVGLA--SLVQEAYACCRKGWGKTI 301 (388)
Q Consensus 268 ~~-----~g~~dvvi-d~~g~~--~~~~~~~~~l~~~~G~~v 301 (388)
+. .+.||.|| |+--.. ..++.+++++++| |.++
T Consensus 147 l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv 187 (247)
T PLN02589 147 MIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIG 187 (247)
T ss_pred HHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEE
Confidence 43 24899995 443222 3367888999986 6654
No 486
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.16 E-value=0.59 Score=42.13 Aligned_cols=79 Identities=22% Similarity=0.140 Sum_probs=47.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCc-hHHH----HHHHcCCcE---EEcCCCCCCccHHHHHHhhc--
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE----IGKRFGVTE---FVNSKNCGDKSVSQIIIDMT-- 269 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~lga~~---v~~~~~~~~~~~~~~i~~~~-- 269 (388)
++.++||+|+ |.+|...++.+...|+ +|+.+.++. +..+ .++..+... ..|-.+ .....+.+.+..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV--ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 5789999987 9999999999989999 777766643 2222 222233321 223333 122222222221
Q ss_pred CCCccEEEEccCC
Q 016507 270 DGGADYCFECVGL 282 (388)
Q Consensus 270 ~g~~dvvid~~g~ 282 (388)
.+++|+++++.|.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 1379999998874
No 487
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.16 E-value=0.55 Score=42.00 Aligned_cols=76 Identities=20% Similarity=0.232 Sum_probs=47.6
Q ss_pred EEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHH----HHcCCcE-E--EcCCCCCCccHHHHHHhhcC--CCc
Q 016507 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--GGA 273 (388)
Q Consensus 204 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~--g~~ 273 (388)
++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ...+... . .|-.+ .+.+.+.+.+... ++.
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence 6899987 9999999998888899 899888876554322 2223221 2 23222 1223333333221 368
Q ss_pred cEEEEccCC
Q 016507 274 DYCFECVGL 282 (388)
Q Consensus 274 dvvid~~g~ 282 (388)
|++|++.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 488
>PLN02244 tocopherol O-methyltransferase
Probab=93.15 E-value=0.34 Score=45.82 Aligned_cols=95 Identities=21% Similarity=0.275 Sum_probs=61.9
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHc----CCc-E--EEcCCCCCCccHHHHHHhhcCCC
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-E--FVNSKNCGDKSVSQIIIDMTDGG 272 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~-~--v~~~~~~~~~~~~~~i~~~~~g~ 272 (388)
+++++||=+|.|. |..+..+++..|+ +|++++.++...+.+++. +.. . ++..+- .++ .+..+.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence 6788999988754 6677778887788 999999999877766542 321 1 111111 110 112237
Q ss_pred ccEEEEccCC------HHHHHHHHHHhhcCCceEEEEcc
Q 016507 273 ADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 273 ~dvvid~~g~------~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
||+|+..-.. ...+.++.+.|+++ |+++....
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9999864332 23477899999998 99987653
No 489
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=93.05 E-value=1.8 Score=35.60 Aligned_cols=99 Identities=22% Similarity=0.276 Sum_probs=54.9
Q ss_pred EEEEEccchhHHHHHHHHHH-cCCcEEEEEcC--CchHHHHHHH----cCC---cE-------EEcCCCCCCccH-HHHH
Q 016507 204 TVVIFGLGSIGLAVAEGARL-CGATRIIGVDV--ISEKFEIGKR----FGV---TE-------FVNSKNCGDKSV-SQII 265 (388)
Q Consensus 204 ~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~--~~~~~~~~~~----lga---~~-------v~~~~~~~~~~~-~~~i 265 (388)
+|.|+|.|.+|...++.+.. .+. +++++.. +.+...++.+ +|. +. +++-+. ..-+ ....
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~-~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~--i~~~~~~~p 78 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDI-EVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKK--IKVLAERDP 78 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC-EEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEE--EEEEecCCh
Confidence 58899999999988887764 456 5555432 3344444432 221 10 111000 0000 0011
Q ss_pred HhhcCC--CccEEEEccCCHHHHHHHHHHhhcCCceEEEEccC
Q 016507 266 IDMTDG--GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 306 (388)
Q Consensus 266 ~~~~~g--~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 306 (388)
.++..+ ++|+|+||+|.-...+.+...+..+ .+-|.++..
T Consensus 79 ~~~~w~~~gvDiVie~tG~f~~~~~~~~hl~~G-akkViisap 120 (149)
T smart00846 79 ANLPWKELGVDIVVECTGKFTTREKASAHLKAG-AKKVIISAP 120 (149)
T ss_pred HHCcccccCCeEEEeccccccchHHHHHHHHcC-CCEEEeCCC
Confidence 111112 8999999988755456666788776 777777664
No 490
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=93.04 E-value=1.2 Score=40.07 Aligned_cols=98 Identities=21% Similarity=0.112 Sum_probs=66.9
Q ss_pred HHHhcCCCCCCEEEEEccchhHHHHHHHHHHc-CCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCC
Q 016507 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 271 (388)
Q Consensus 193 l~~~~~~~~~~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g 271 (388)
+.......++++||=+|.|. |..+..+++.. +. +|++++.++.-.+.+++.+++.+. .+.. .+. ..+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~-~~~--~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR-DWK--PKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh-hCC--CCC
Confidence 44556677889999998765 66777777764 56 899999999888888776654332 1221 111 123
Q ss_pred CccEEEEccC-----C-HHHHHHHHHHhhcCCceEEEE
Q 016507 272 GADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 272 ~~dvvid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 303 (388)
.||+|+.... . ...+..+.+.|+++ |.++..
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 8999987443 2 23467888999998 998764
No 491
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.02 E-value=0.71 Score=43.79 Aligned_cols=41 Identities=17% Similarity=0.005 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHH
Q 016507 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (388)
Q Consensus 199 ~~~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 240 (388)
-+.+.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~ 48 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSL 48 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHH
Confidence 456779999987 9999999998888899 8998877765544
No 492
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=93.00 E-value=0.94 Score=41.32 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=60.3
Q ss_pred CCCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcC-C-cEEEcCCCC--CCccHHHHHHhhcCCCccE
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V-TEFVNSKNC--GDKSVSQIIIDMTDGGADY 275 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a-~~v~~~~~~--~~~~~~~~i~~~~~g~~dv 275 (388)
+..++||++|+|. |..+..+++.....++.+++.+++-.+.++++- . ...++.... ...+..+.+.+ ..+.||+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence 3456999998765 445566667665568999999888777766531 0 000110000 00122333333 2348999
Q ss_pred EEEccC----------CHHHHHHHHHHhhcCCceEEEEcc
Q 016507 276 CFECVG----------LASLVQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 276 vid~~g----------~~~~~~~~~~~l~~~~G~~v~~g~ 305 (388)
|+--.. ....++.+.+.|+++ |.++....
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~~ 187 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQSE 187 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcCC
Confidence 965322 123356888999997 99987643
No 493
>PRK06046 alanine dehydrogenase; Validated
Probab=92.99 E-value=1.2 Score=41.96 Aligned_cols=94 Identities=15% Similarity=0.110 Sum_probs=61.6
Q ss_pred CCCCEEEEEccchhHHHHHHHHH-HcCCcEEEEEcCCchHHHHHH-Hc----CCcEEEcCCCCCCccHHHHHHhhcCCCc
Q 016507 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGK-RF----GVTEFVNSKNCGDKSVSQIIIDMTDGGA 273 (388)
Q Consensus 200 ~~~~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~l----ga~~v~~~~~~~~~~~~~~i~~~~~g~~ 273 (388)
+...+|.|+|+|..|...+..+. ..+.++|.+.++++++.+.+. .+ +..... . .++.+.+ ..
T Consensus 127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~-----~~~~~~l------~a 194 (326)
T PRK06046 127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-A-----EDIEEAC------DC 194 (326)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-e-----CCHHHHh------hC
Confidence 34568999999999988777655 567878888999887766433 33 322111 1 2233322 27
Q ss_pred cEEEEccCCHHHHHHHHHHhhcCCceEEEEccCC
Q 016507 274 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 307 (388)
Q Consensus 274 dvvid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 307 (388)
|+|+.|+++...+ -..+.++++ -++..+|...
T Consensus 195 DiVv~aTps~~P~-~~~~~l~~g-~hV~~iGs~~ 226 (326)
T PRK06046 195 DILVTTTPSRKPV-VKAEWIKEG-THINAIGADA 226 (326)
T ss_pred CEEEEecCCCCcE-ecHHHcCCC-CEEEecCCCC
Confidence 9999999865422 234567886 8888898754
No 494
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=92.98 E-value=0.48 Score=42.34 Aligned_cols=74 Identities=26% Similarity=0.320 Sum_probs=46.7
Q ss_pred CCCEEEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCc-EE--EcCCCCCCccHHHHHHhhcC--CCcc
Q 016507 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGAD 274 (388)
Q Consensus 201 ~~~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~--g~~d 274 (388)
++.++||+|+ |.+|...++.+...|+ +|++++++. +...+.. .. .|-.+ .+.+.+.+.+... +++|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4678999987 9999999998888899 899998765 1122211 11 23222 1223333332221 3689
Q ss_pred EEEEccCC
Q 016507 275 YCFECVGL 282 (388)
Q Consensus 275 vvid~~g~ 282 (388)
++|.+.|.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99999875
No 495
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=92.95 E-value=0.77 Score=46.21 Aligned_cols=34 Identities=35% Similarity=0.595 Sum_probs=31.2
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCC
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 235 (388)
.|.+|.|+|.|.+|...++.++.+|+ +|++.++.
T Consensus 137 ~gktvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~ 170 (525)
T TIGR01327 137 YGKTLGVIGLGRIGSIVAKRAKAFGM-KVLAYDPY 170 (525)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCC
Confidence 56899999999999999999999999 99999874
No 496
>PRK06932 glycerate dehydrogenase; Provisional
Probab=92.91 E-value=0.52 Score=44.06 Aligned_cols=84 Identities=20% Similarity=0.212 Sum_probs=53.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEEcCCCCCCccHHHHHHhhcCCCccEEEEcc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 280 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~~dvvid~~ 280 (388)
.|.+|.|+|-|.+|...+++++.+|+ +|++.++..... ... .. .++.+.+. ..|+|+-+.
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~~~~~-----~~~------~~---~~l~ell~-----~sDiv~l~~ 205 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHKGASV-----CRE------GY---TPFEEVLK-----QADIVTLHC 205 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCcccc-----ccc------cc---CCHHHHHH-----hCCEEEEcC
Confidence 47899999999999999999999999 899987543210 000 00 12333332 467776666
Q ss_pred CCHHH-----HHHHHHHhhcCCceEEEEcc
Q 016507 281 GLASL-----VQEAYACCRKGWGKTIVLGV 305 (388)
Q Consensus 281 g~~~~-----~~~~~~~l~~~~G~~v~~g~ 305 (388)
+.... -...+..|+++ ..+|.++.
T Consensus 206 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 234 (314)
T PRK06932 206 PLTETTQNLINAETLALMKPT-AFLINTGR 234 (314)
T ss_pred CCChHHhcccCHHHHHhCCCC-eEEEECCC
Confidence 53321 14667777776 77776653
No 497
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=92.90 E-value=1.3 Score=47.92 Aligned_cols=94 Identities=12% Similarity=0.126 Sum_probs=62.8
Q ss_pred CCEEEEEccchhHHHHHHHHHH-cCCc------------EEEEEcCCchHHHHHHH-c-CCcE-EEcCCCCCCccHHHHH
Q 016507 202 GSTVVIFGLGSIGLAVAEGARL-CGAT------------RIIGVDVISEKFEIGKR-F-GVTE-FVNSKNCGDKSVSQII 265 (388)
Q Consensus 202 ~~~VlI~Gag~vG~~ai~la~~-~g~~------------~Vi~~~~~~~~~~~~~~-l-ga~~-v~~~~~~~~~~~~~~i 265 (388)
..+|+|+|+|.+|..++..+.. .++. .|++.+.+.++.+.+.+ + +++. .+|..+ . +.+
T Consensus 569 ~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D-----~-e~L 642 (1042)
T PLN02819 569 SQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSD-----S-ESL 642 (1042)
T ss_pred CCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCC-----H-HHH
Confidence 5699999999999998887754 3442 37777777766655433 4 4322 344443 2 334
Q ss_pred HhhcCCCccEEEEccCCHHHHHHHHHHhhcCCceEEEE
Q 016507 266 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 303 (388)
Q Consensus 266 ~~~~~g~~dvvid~~g~~~~~~~~~~~l~~~~G~~v~~ 303 (388)
.++.. +.|+|+.|++.......+..++..+ -+++..
T Consensus 643 ~~~v~-~~DaVIsalP~~~H~~VAkaAieaG-kHvv~e 678 (1042)
T PLN02819 643 LKYVS-QVDVVISLLPASCHAVVAKACIELK-KHLVTA 678 (1042)
T ss_pred HHhhc-CCCEEEECCCchhhHHHHHHHHHcC-CCEEEC
Confidence 33322 5999999999987788888888885 555544
No 498
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=92.90 E-value=0.51 Score=48.91 Aligned_cols=77 Identities=21% Similarity=0.174 Sum_probs=51.8
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCch---------------------HHHHHHHcCCcEEEcCCCCCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 259 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 259 (388)
.+.+|+|+|+|+.|+.++..+...|+ +|++++..+. ..+.++++|++..++..-..+-
T Consensus 192 ~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~dv 270 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRDI 270 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCcc
Confidence 56899999999999999999999999 8988876542 1344566787655554210001
Q ss_pred cHHHHHHhhcCCCccEEEEccCCH
Q 016507 260 SVSQIIIDMTDGGADYCFECVGLA 283 (388)
Q Consensus 260 ~~~~~i~~~~~g~~dvvid~~g~~ 283 (388)
.+ +.+. ..||.||-++|..
T Consensus 271 ~~-~~~~----~~~DaVilAtGa~ 289 (652)
T PRK12814 271 TL-EELQ----KEFDAVLLAVGAQ 289 (652)
T ss_pred CH-HHHH----hhcCEEEEEcCCC
Confidence 11 1221 1589998888864
No 499
>PRK06436 glycerate dehydrogenase; Provisional
Probab=92.90 E-value=0.56 Score=43.54 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=31.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHcCCcEEEEEcCCc
Q 016507 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (388)
Q Consensus 201 ~~~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 236 (388)
.|.+|.|+|-|.+|...+++++.+|+ +|++.+++.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~ 155 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY 155 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 58999999999999999999999999 999998753
No 500
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=92.90 E-value=0.33 Score=45.03 Aligned_cols=73 Identities=15% Similarity=0.130 Sum_probs=43.8
Q ss_pred EEEEcc-chhHHHHHHHHHHcCCcEEEEEcCCchHHHHHHHcCCcEEE-cCCCCCCccHHHHHHhhcCCCccEEEEccC
Q 016507 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG 281 (388)
Q Consensus 205 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~~dvvid~~g 281 (388)
|||+|+ |.+|..+++.+...|...|+++++...... +..++...+. +.++ .++.+.+.+..-.++|+|+++.+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDK---EDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcc---hhHHHHHHhhccCCCCEEEECcc
Confidence 689987 999999999999889756888765443222 2222222122 1222 33333333311138999999986
Done!