Query 016508
Match_columns 388
No_of_seqs 130 out of 1437
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:28:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016508.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016508hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0165 ArgH Argininosuccinate 100.0 1E-102 2E-107 769.7 41.2 381 2-382 78-458 (459)
2 KOG1316 Argininosuccinate lyas 100.0 1.9E-97 4E-102 693.2 31.9 382 1-383 80-461 (464)
3 PLN02646 argininosuccinate lya 100.0 5.1E-96 1E-100 744.6 42.4 382 2-383 91-472 (474)
4 PRK04833 argininosuccinate lya 100.0 1.9E-91 4.1E-96 709.7 41.4 378 2-379 77-454 (455)
5 TIGR00838 argH argininosuccina 100.0 4.8E-91 1E-95 708.6 43.3 380 2-381 74-454 (455)
6 PRK06705 argininosuccinate lya 100.0 7.7E-91 1.7E-95 711.1 41.1 384 2-385 83-475 (502)
7 PRK00855 argininosuccinate lya 100.0 3.2E-90 6.8E-95 702.9 42.4 380 2-381 79-458 (459)
8 cd01359 Argininosuccinate_lyas 100.0 9.2E-88 2E-92 682.1 41.6 379 2-380 55-434 (435)
9 PRK12308 bifunctional arginino 100.0 1E-86 2.2E-91 699.8 42.1 383 2-384 77-459 (614)
10 PRK02186 argininosuccinate lya 100.0 3.8E-82 8.2E-87 690.1 40.1 375 2-385 483-860 (887)
11 PRK06389 argininosuccinate lya 100.0 4.3E-79 9.4E-84 607.8 33.2 312 2-320 74-386 (434)
12 cd01597 pCLME prokaryotic 3-ca 100.0 2.9E-78 6.3E-83 612.7 37.5 357 5-375 69-436 (437)
13 PRK08540 adenylosuccinate lyas 100.0 2.4E-78 5.1E-83 614.7 36.3 363 5-380 73-447 (449)
14 PRK08470 adenylosuccinate lyas 100.0 3.4E-78 7.5E-83 610.7 36.9 357 4-373 65-440 (442)
15 PRK07492 adenylosuccinate lyas 100.0 6E-78 1.3E-82 606.9 36.8 350 10-374 73-432 (435)
16 PRK07380 adenylosuccinate lyas 100.0 4.2E-77 9.2E-82 600.1 37.0 348 11-372 71-428 (431)
17 PRK06390 adenylosuccinate lyas 100.0 1.5E-76 3.2E-81 601.1 36.5 364 6-383 75-448 (451)
18 TIGR00928 purB adenylosuccinat 100.0 3.4E-76 7.3E-81 597.0 34.0 351 7-372 71-434 (435)
19 PRK12273 aspA aspartate ammoni 100.0 1.5E-75 3.4E-80 594.8 36.9 338 6-358 102-464 (472)
20 cd01360 Adenylsuccinate_lyase_ 100.0 3.9E-75 8.4E-80 580.5 31.8 304 6-315 64-374 (387)
21 PRK13353 aspartate ammonia-lya 100.0 2.2E-74 4.7E-79 586.6 37.4 334 9-357 107-461 (473)
22 cd01595 Adenylsuccinate_lyase_ 100.0 7.4E-75 1.6E-79 578.3 28.8 305 4-315 59-375 (381)
23 PRK12425 fumarate hydratase; P 100.0 1.1E-73 2.3E-78 579.2 36.9 339 4-357 95-459 (464)
24 cd01357 Aspartase Aspartase. T 100.0 3E-73 6.6E-78 575.4 36.3 330 7-351 96-450 (450)
25 PRK09053 3-carboxy-cis,cis-muc 100.0 4.7E-73 1E-77 576.0 36.7 351 11-376 81-446 (452)
26 cd03302 Adenylsuccinate_lyase_ 100.0 4.7E-73 1E-77 572.8 34.9 339 11-356 73-434 (436)
27 PRK00485 fumC fumarate hydrata 100.0 5.4E-73 1.2E-77 576.1 35.1 336 5-357 98-461 (464)
28 PLN00134 fumarate hydratase; P 100.0 5.4E-72 1.2E-76 566.5 36.9 338 6-358 95-454 (458)
29 COG0015 PurB Adenylosuccinate 100.0 4.6E-71 1E-75 546.9 35.4 350 11-374 74-436 (438)
30 TIGR00979 fumC_II fumarate hyd 100.0 4.9E-71 1.1E-75 559.5 36.2 334 8-356 102-457 (458)
31 PRK14515 aspartate ammonia-lya 100.0 4.6E-71 1E-75 560.3 34.9 340 2-357 98-467 (479)
32 TIGR00839 aspA aspartate ammon 100.0 7.2E-71 1.6E-75 558.6 35.6 335 7-357 99-459 (468)
33 cd01362 Fumarase_classII Class 100.0 9.2E-71 2E-75 557.5 34.5 335 5-354 94-454 (455)
34 cd01334 Lyase_I Lyase class I 100.0 1.7E-70 3.6E-75 536.7 29.0 276 2-277 47-325 (325)
35 cd01596 Aspartase_like asparta 100.0 7.9E-69 1.7E-73 542.3 36.4 332 5-351 94-450 (450)
36 PRK09285 adenylosuccinate lyas 100.0 3.1E-66 6.7E-71 523.7 30.6 338 6-372 85-454 (456)
37 TIGR02426 protocat_pcaB 3-carb 100.0 2.9E-64 6.4E-69 493.6 26.5 261 5-274 69-338 (338)
38 cd01598 PurB PurB_like adenylo 100.0 4.5E-63 9.7E-68 495.7 28.0 294 11-318 72-388 (425)
39 PRK05975 3-carboxy-cis,cis-muc 100.0 3.6E-62 7.9E-67 480.2 26.2 261 6-276 79-347 (351)
40 PLN02848 adenylosuccinate lyas 100.0 3.4E-60 7.4E-65 479.0 34.8 335 11-371 97-456 (458)
41 PF00206 Lyase_1: Lyase; Inte 100.0 4.2E-60 9E-65 460.8 17.9 225 2-226 72-312 (312)
42 COG1027 AspA Aspartate ammonia 100.0 1.1E-57 2.4E-62 433.8 30.5 335 8-357 107-462 (471)
43 COG0114 FumC Fumarase [Energy 100.0 1.3E-56 2.8E-61 427.8 31.8 335 8-357 104-460 (462)
44 KOG2700 Adenylosuccinate lyase 100.0 3.4E-45 7.3E-50 353.5 27.1 352 11-376 86-460 (481)
45 KOG1317 Fumarase [Energy produ 100.0 1.2E-45 2.6E-50 343.2 19.1 332 8-356 130-484 (487)
46 cd01594 Lyase_I_like Lyase cla 100.0 1.6E-39 3.5E-44 302.8 24.0 208 13-267 16-230 (231)
47 PRK08937 adenylosuccinate lyas 100.0 1.7E-36 3.6E-41 280.4 20.1 188 166-356 22-215 (216)
48 PF14698 ASL_C2: Argininosucci 99.5 2.4E-14 5.2E-19 108.4 6.9 69 289-357 1-69 (70)
49 PF10397 ADSL_C: Adenylosuccin 99.1 3.3E-10 7.2E-15 88.4 7.3 80 288-374 2-81 (81)
50 PF08328 ASL_C: Adenylosuccina 98.2 1.2E-05 2.5E-10 65.7 9.6 76 241-318 2-80 (115)
51 PF10415 FumaraseC_C: Fumarase 97.6 0.00015 3.2E-09 52.1 4.8 53 292-357 2-54 (55)
52 KOG2700 Adenylosuccinate lyase 96.4 0.063 1.4E-06 53.8 13.3 128 68-229 224-357 (481)
53 PF14748 P5CR_dimer: Pyrroline 43.0 81 0.0017 25.5 6.0 29 290-318 22-50 (107)
54 PRK07634 pyrroline-5-carboxyla 37.5 1.3E+02 0.0028 27.7 7.2 46 275-320 161-213 (245)
55 CHL00180 rbcR LysR transcripti 33.5 1.4E+02 0.0031 28.2 7.1 52 69-121 44-95 (305)
56 TIGR00112 proC pyrroline-5-car 30.6 2.7E+02 0.0059 25.9 8.2 47 272-318 136-189 (245)
57 COG0345 ProC Pyrroline-5-carbo 30.3 2.7E+02 0.0058 26.6 8.1 52 267-318 148-206 (266)
58 PF12643 MazG-like: MazG-like 30.2 1.6E+02 0.0035 23.6 5.6 57 259-318 15-71 (98)
59 PRK12682 transcriptional regul 29.2 1.7E+02 0.0036 27.8 6.7 51 69-119 41-91 (309)
60 KOG4797 Transcriptional regula 28.3 2E+02 0.0043 23.6 5.7 38 35-72 54-91 (123)
61 PRK12683 transcriptional regul 27.8 2.3E+02 0.005 27.0 7.5 49 69-117 41-89 (309)
62 COG3937 Uncharacterized conser 27.1 1.4E+02 0.0031 24.4 4.7 34 292-325 26-60 (108)
63 TIGR03544 DivI1A_domain DivIVA 27.0 1.2E+02 0.0026 19.1 3.5 19 362-380 15-33 (34)
64 cd04444 DEP_PLEK2 DEP (Disheve 26.6 1.5E+02 0.0033 24.3 4.9 56 263-318 5-62 (109)
65 PF07328 VirD1: T-DNA border e 25.6 1.5E+02 0.0034 25.1 4.8 69 30-99 47-124 (147)
66 TIGR00637 ModE_repress ModE mo 24.7 2.5E+02 0.0055 22.3 5.9 53 68-120 40-97 (99)
67 PTZ00431 pyrroline carboxylate 23.9 2E+02 0.0043 27.0 6.0 52 267-318 144-202 (260)
68 COG2352 Ppc Phosphoenolpyruvat 23.3 5.9E+02 0.013 28.5 9.9 33 183-220 707-741 (910)
69 PF05924 SAMP: SAMP Motif; In 22.1 27 0.00059 19.6 -0.1 9 202-210 11-19 (20)
70 PF03861 ANTAR: ANTAR domain; 21.9 1.8E+02 0.0039 20.4 4.1 29 300-331 24-52 (56)
71 PRK12491 pyrroline-5-carboxyla 20.5 2.6E+02 0.0056 26.6 6.1 45 274-318 158-209 (272)
No 1
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-102 Score=769.74 Aligned_cols=381 Identities=56% Similarity=0.827 Sum_probs=375.8
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH 81 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh 81 (388)
++|++||||++||++|++++|+.|||+|+||||||+|.|+++||+|+.+..|...+..|+++|+++|++|.+|+||||||
T Consensus 78 ~~~~~EDvH~aiE~~L~~~iG~~ggkLhtgRSRNDQVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTH 157 (459)
T COG0165 78 LDPDDEDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTH 157 (459)
T ss_pred CCCccccHHHHHHHHHHHHHhhhhchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCccc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
+|+|||+|||||+.+|++.|.||++||.+++++++.||||+||++||++|+||+++|++|||+.+..|++|++++||++.
T Consensus 158 lQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~l 237 (459)
T COG0165 158 LQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFIL 237 (459)
T ss_pred ccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHHHHHHHcCCchhhcCchhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 241 (388)
|+++++++++.+|||||+|+++|+|+|||+|++||++++|||||||||||+.+|.+|++++++.|...+++++++++|++
T Consensus 238 e~l~~~s~~~~~LSRlaedlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPla 317 (459)
T COG0165 238 EFLSAAALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLA 317 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV 321 (388)
Q Consensus 242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~ 321 (388)
||||+|+.++++|++++.+..+|..+..++++|+||+++|++.+..++.++|++|++|+++|+|||+||++++++|+.+.
T Consensus 318 YnrDlQedke~lfds~~t~~~~l~~~~~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~kGvPFReAh~ivG~~v~~~~ 397 (459)
T COG0165 318 YNRDLQEDKEPLFDSVDTLEDSLRVLAGMVSGLTVNKERMREAAEAGFSTATDLADYLVRKGVPFREAHEIVGEAVRRAE 397 (459)
T ss_pred ccHHHHhhhHHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHhhcccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhh
Q 016508 322 SKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG 382 (388)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~ 382 (388)
+.|+++.++..++++.+.+..++++.++++|+..|+.|.++||++|++|+++++++++.++
T Consensus 398 ~~~~~l~~l~~~~~~~~~~~~~~dv~~~l~~~~~v~~R~~~Ggtap~~v~~~i~~~~~~l~ 458 (459)
T COG0165 398 ERGKDLADLSLEELQSISPLIDEDVYEVLTPEESVAKRNSEGGTAPEEVREAIARAKARLA 458 (459)
T ss_pred HcCCCHHhccHHHHhhhccccchHHHHHhchHHHHHHhhccCCCCHHHHHHHHHHHHHhhc
Confidence 9999999999999988888899999999999999999999999999999999999998875
No 2
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-97 Score=693.25 Aligned_cols=382 Identities=52% Similarity=0.770 Sum_probs=375.5
Q ss_pred CCCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Q 016508 1 MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYT 80 (388)
Q Consensus 1 ~~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grT 80 (388)
++.|++||||+++|++|.|++|+.++++|+||||||++.|.+|||+|+++..+...+..|+++++++|+.+.+++|||||
T Consensus 80 ~~~p~dEDvHtanErrL~eliG~~agKlHTgRSRNDQV~TDlRLw~r~~i~~~~~~l~~L~~~~v~rAe~~~dvlmpGYT 159 (464)
T KOG1316|consen 80 KLNPNDEDVHTANERRLTELIGEIAGKLHTGRSRNDQVVTDLRLWLRDAIDTILGLLWNLIRVLVDRAEAELDVLMPGYT 159 (464)
T ss_pred EeCCCchhhhhHHHHHHHHHHhhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCeeccChh
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHH
Q 016508 81 HLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFV 160 (388)
Q Consensus 81 h~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~ 160 (388)
|+|.|||+.|.||+.+++..|.||..||.+++.|+|++|||+||++|+++++||+.+++.|||..+..|++++++.||++
T Consensus 160 HLQRAQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR~~la~~LgF~~v~~NSm~AvsDRDFV 239 (464)
T KOG1316|consen 160 HLQRAQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDREFLAEELGFEGVIMNSMDAVSDRDFV 239 (464)
T ss_pred hhhhccCchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccHHHHHHhcCCcccchhhhhccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcc
Q 016508 161 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240 (388)
Q Consensus 161 ~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 240 (388)
+||..|.++++.+|+|+|+||++|++.|||||.+.|++.+|||+||||+||+.+|.+|+++++|+|.+.++++.++++|+
T Consensus 240 vef~fw~sm~m~HlSRlaEdlIiy~t~EF~Fv~lSDaySTGSSlMPQKKNpDslELlRgksgrV~gdl~g~lmt~KG~Ps 319 (464)
T KOG1316|consen 240 VEFLFWASMVMTHLSRLAEDLIIYSTKEFGFVTLSDAYSTGSSLMPQKKNPDSLELLRGKSGRVFGDLTGLLMTLKGLPS 319 (464)
T ss_pred HHHHHHHHHHHHHHHHHhhHhheeeccccCceeeccccccCcccCCCCCCCCHHHHhccccceehhhhHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 016508 241 AYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALC 320 (388)
Q Consensus 241 ~~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a 320 (388)
.|++|+|+.++++++++..+...++..+.++++++||+++|.+.+..... ||++|+||||||+|||++|++++++|..|
T Consensus 320 tYnkDlQeDKep~Fds~~tv~~~l~v~tgv~stltvn~e~m~~aLt~dml-ATdlA~YLVrKGvPFRqtHhisG~~V~~a 398 (464)
T KOG1316|consen 320 TYNKDLQEDKEPLFDSSKTVSDSLQVATGVISTLTVNQENMEKALTPDML-ATDLAYYLVRKGVPFRQTHHISGKAVRMA 398 (464)
T ss_pred ccccchhhhhhHHHhhHHHHHHHHHHHHHHhhheeECHHHHhhccCchhh-HhHHHHHHHHcCCCchhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765 99999999999999999999999999999
Q ss_pred HHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhhc
Q 016508 321 VSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI 383 (388)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~~ 383 (388)
.++|.++.++.+++++.+++++++|+...++.+++|++|.++||++...|.++++.++..+.+
T Consensus 399 e~rg~~l~~LsledlqklsplF~eDv~~v~~ye~sVek~~a~GgTa~s~V~eQl~~~k~al~~ 461 (464)
T KOG1316|consen 399 EERGVTLDKLSLEDLQKLSPLFEEDVFCVFNYENSVEKRCAIGGTAKSCVLEQLRQLKKALLQ 461 (464)
T ss_pred HHcCCCcccCCHHHHhhcCcccccchHHhhchhhhHHHhhccCCchHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999987654
No 3
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=5.1e-96 Score=744.56 Aligned_cols=382 Identities=79% Similarity=1.213 Sum_probs=372.3
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH 81 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh 81 (388)
++++.||+|+++|++|.+++|+.|+|||+|||||||++|+++|++|+.+..+.+.|..|+++|..+|++|++|+||||||
T Consensus 91 ~~~~~ed~h~~iE~~L~e~~G~~g~~lH~grSrND~v~Ta~~L~lr~~l~~l~~~L~~L~~~L~~~A~~~~dtvmpGrTH 170 (474)
T PLN02646 91 WRPDREDVHMNNEARLTELIGEPAKKLHTARSRNDQVATDTRLWCRDAIDVIRKRIKTLQVALVELAEKNVDLVVPGYTH 170 (474)
T ss_pred CCCCCCchHHHHHHHHHHHhchhhCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEecccC
Confidence 57888999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
+||||||||||||++|+++|.||++||.+++++++.+|||||+++||++++||+++|++|||..|..|++||+++||+++
T Consensus 171 lQ~AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr~~~A~~LGf~~~~~n~~da~~~RD~~~ 250 (474)
T PLN02646 171 LQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRFMTAKDLGFTAPMRNSIDAVSDRDFVL 250 (474)
T ss_pred CccceeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCHHHHHHHhCCCCCCCChHHHHhccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 241 (388)
+++++++.++.+|+|||+|+++|+++||||+.+|+++++|||||||||||+.+|.++++|+++.|+..+++.+.+++|++
T Consensus 251 e~~~~la~ia~~LsRia~Dl~l~ss~e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~p~~ 330 (474)
T PLN02646 251 EFLFANSITAIHLSRLGEEWVLWASEEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTVLALCKGLPTA 330 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeeCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhhHHHHHHhcCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV 321 (388)
Q Consensus 242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~ 321 (388)
|+||+|+.|.++++++..+..++..+..++++|+||+++|++++..+++++|+++++|+++|+|||+||++|+++++.|.
T Consensus 331 ~~rD~q~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~At~la~~Lv~~Gi~fr~Ah~iV~~~v~~a~ 410 (474)
T PLN02646 331 YNRDLQEDKEPLFDSVDTVSDMLEVATEFAQNITFNPERIKKSLPAGMLDATTLADYLVRKGVPFRETHHIVGAAVALAE 410 (474)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhhc
Q 016508 322 SKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI 383 (388)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~~ 383 (388)
++|+++.++..+++..+.+.+++++.+++||+++|++|.++|||+|++|.+++.++++.++.
T Consensus 411 ~~g~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~~r~~~Gg~~p~~v~~~~~~~~~~l~~ 472 (474)
T PLN02646 411 SKGCELSDLTLEDLKSINPVFEEDVYEVLGVENSVEKFDSYGSTGSRSVLEQLEKWRTKLEI 472 (474)
T ss_pred HhCCCHHHHHHHHHHHhcccchHHHHHhCCHHHHHHHccCCCCCCHHHHHHHHHHHHHHhhc
Confidence 99999999999888777777889999999999999999999999999999999999988754
No 4
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.9e-91 Score=709.70 Aligned_cols=378 Identities=47% Similarity=0.737 Sum_probs=365.7
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH 81 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh 81 (388)
+++..||+|..||++|.+++|+.|+|||+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++|+||||||
T Consensus 77 ~~~~~edv~~~ie~~L~~~~g~~g~~lH~grSrnD~~~Ta~rl~~r~~l~~l~~~l~~l~~~L~~~A~~~~~tvm~GrTH 156 (455)
T PRK04833 77 LASDAEDIHSWVEGKLIDKVGDLGKKLHTGRSRNDQVATDLKLWCKDQVAELLTALRQLQSALVETAENNQDAVMPGYTH 156 (455)
T ss_pred CCCCCchHHHHHHHHHHHHhccccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEecccc
Confidence 46889999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
+|||||+||||||++|+++|.||.+||.+++++++.|||||||++||++++||+++|++|||..|..|+++++++||+++
T Consensus 157 ~Q~AqP~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr~~~a~~LGf~~~~~n~~~a~~~rd~~~ 236 (455)
T PRK04833 157 LQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVL 236 (455)
T ss_pred CccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCHHHHHHHhCCCCCCCCHHHHHhccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 241 (388)
+++++++.++.+|+|||+|+++|+|+|+|++++++++++||||||||+||+.+|+++++|+++.|...+++.+.+++|++
T Consensus 237 e~~~~l~~~a~~L~ria~Dl~l~ss~e~g~~el~~~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~ 316 (455)
T PRK04833 237 ELLSDASISMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMLMTLKGLPLA 316 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeeCCCCCCCcccCCCCCCChHHHHHHHHHHHHHhhHHHHHHHHhCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV 321 (388)
Q Consensus 242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~ 321 (388)
|+||+++++..+++++..+..+++.+..++++|+||+++|++++..++++++++++.|+++|+|||+||++|+++++.+.
T Consensus 317 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~~a~~L~~~g~~~r~Ah~~v~~~~~~a~ 396 (455)
T PRK04833 317 YNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAI 396 (455)
T ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCeECHHHHHHHHHccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHH
Q 016508 322 SKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVA 379 (388)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~ 379 (388)
++|+++.++..+....+.+..++++.+++||+++|++|.++|||+|++|.++++++++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~v~~r~~~Gg~~~~~v~~~~~~~~~ 454 (455)
T PRK04833 397 RQGKPLEDLPLAELQKFSSVIGDDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAAAKA 454 (455)
T ss_pred HcCCChhhcCHHHHHHhcccchHHHHHhCCHHHHHHhccCCCCCCHHHHHHHHHHHhh
Confidence 9999999998887766666678889999999999999999999999999999988764
No 5
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=4.8e-91 Score=708.65 Aligned_cols=380 Identities=52% Similarity=0.786 Sum_probs=367.0
Q ss_pred CCCCCCchHHHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYT 80 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grT 80 (388)
+++..||+|++||+++.+++| +.|+|||+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++|+|||||
T Consensus 74 ~~~~~~d~~~~ie~~l~e~~g~~~g~~iH~g~SrnD~~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~m~grT 153 (455)
T TIGR00838 74 LDPDDEDIHMAIERELIDRVGEDLGGKLHTGRSRNDQVATDLRLYLRDHVLELAEALLDLQDALIELAEKHVETLMPGYT 153 (455)
T ss_pred CCCCcCcHHHHHHHHHHHHhCCCccCCccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccc
Confidence 578899999999999999999 8899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHH
Q 016508 81 HLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFV 160 (388)
Q Consensus 81 h~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~ 160 (388)
|+||||||||||||++|+++|.|+++||.+++++++.+|||||+++||++++||+++|+.|||..+..|+++|+++||++
T Consensus 154 H~Q~A~P~T~G~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~ 233 (455)
T TIGR00838 154 HLQRAQPITLAHHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDREYLAELLGFDAVTENSLDAVSDRDFI 233 (455)
T ss_pred ccccceeccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCHHHHHHHcCCCCCcCCHHHHHhCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcc
Q 016508 161 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240 (388)
Q Consensus 161 ~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 240 (388)
++++++++.++.+|+|||+|+++|+++|||||.+|+.+++||||||||+||+.+|.++++|.++.|...+++.+.+++|+
T Consensus 234 ~e~~~~l~~~a~~L~ria~Dl~l~ss~e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 313 (455)
T TIGR00838 234 LELLFVAALIMVHLSRFAEDLILWSTGEFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGNLTGMLMTLKALPL 313 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHhhhHHHHHHHHhcCCh
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred ccccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 016508 241 AYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALC 320 (388)
Q Consensus 241 ~~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a 320 (388)
+||||.++.+..+++++..+..+++.+..++++|+||+++|++++..+++++|++++.|+++|+|||+||++|+++++.+
T Consensus 314 ~~~rd~~~~~~~l~~~~~~~~~al~~~~~~i~~l~v~~~rm~~~~~~~~~~at~la~~Lv~~g~~~r~Ah~~v~~~~~~a 393 (455)
T TIGR00838 314 AYNRDLQEDKEPLFDALKTVELSLEMATGMLDTITVNKERMEEAASAGFSNATELADYLVRKGVPFREAHHIVGELVATA 393 (455)
T ss_pred HhhhhhHhhHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred HHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHh
Q 016508 321 VSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL 381 (388)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~ 381 (388)
.++|+++.++..++...+...+++++++++||+.++++|.++|||+|+.|.+++.++++.+
T Consensus 394 ~~~g~~l~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~Gg~~~~~~~~~~~~~~~~~ 454 (455)
T TIGR00838 394 IERGKGLEELTLEELQKFSPEFDEDVYEALDPESSVEKRDAKGGTAPEEVLQAIAEAKARL 454 (455)
T ss_pred HHcCCCHHHHHHHHHhhhcccCHHHHHHHCCHHHHHHhccCCCCCCHHHHHHHHHHHHHhc
Confidence 9999999999988754344566778999999999999999999999999999999988765
No 6
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=7.7e-91 Score=711.11 Aligned_cols=384 Identities=24% Similarity=0.392 Sum_probs=365.6
Q ss_pred CCCCCCchHHHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYT 80 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grT 80 (388)
+++..||+|.+||.++++..| +.|+|+|+|+|||||++|+++|++|+.+..+...|..++++|.++|++|++|+|||||
T Consensus 83 ~~~~~edv~~~ie~~l~~~~G~~~g~~lH~GrSrnD~v~Ta~~L~lr~~l~~l~~~l~~l~~~l~~~A~~~~~t~m~g~T 162 (502)
T PRK06705 83 YTEQHEDLFFLVEHLISQEAKSDFVSNMHIGRSRNDMGVTMYRMSLRRYVLRLMEHHLLLQESILQLAADHKETIMPAYT 162 (502)
T ss_pred cCCCCCchHHHHHHHHHHhcCchhhccccCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEeccc
Confidence 468899999999999999998 7899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHH
Q 016508 81 HLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFV 160 (388)
Q Consensus 81 h~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~ 160 (388)
|+|||||||||||+++|+++|.||++||.+++++++.+|||||+++|+++|+||+++|++|||..+.+|+++++++||++
T Consensus 163 H~Q~AqP~T~G~~l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~~~r~~~a~~LGf~~~~~ns~~a~~~rD~~ 242 (502)
T PRK06705 163 HTQPAQPTTFGHYTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPIKRERVADLLGFTNVIENSYDAVAGADYL 242 (502)
T ss_pred CCccceehHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCchHHHHHHHHHcCCCCCcCCHHHHHhccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcc
Q 016508 161 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240 (388)
Q Consensus 161 ~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 240 (388)
+++++++++++.+|+|||+|+++|+++|||+|++++++++|||||||||||+.+|.+|++++.+.|...+++.++++.|.
T Consensus 243 ~e~~~~la~~~~~L~Ria~Dl~~~ss~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~~~~~~~~ 322 (502)
T PRK06705 243 LEVSSLLMVMMTNTSRWIHDFLLLATKEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNTPF 322 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccc-cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHc-CCChHHHHHHHHHHHH
Q 016508 241 AYNRDLQED-KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK-QVPFRTSHDIVGKAVA 318 (388)
Q Consensus 241 ~~~rd~~~~-~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~-gi~~r~Ah~~v~~~~~ 318 (388)
+|++|++.. ++.+++++..+..+++.+..++++|+||+++|++++..+++++|++++.|+++ |+|||+||++|+++++
T Consensus 323 ~~~~d~q~~~~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~At~la~~Lv~~~Gl~fr~Ah~iV~~~v~ 402 (502)
T PRK06705 323 GDIVDTEDDLQPYLYKGIEKAIRVFCIMNAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAASVIAN 402 (502)
T ss_pred hhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHhcCchHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 999998765 67789999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHcCCChHHhhHHhhhc-----c-CCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhhccc
Q 016508 319 LCVSKECQLQDLSLDEMRS-----L-NPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINR 385 (388)
Q Consensus 319 ~a~~~~~~~~~~~~~~~~~-----~-~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~~~~ 385 (388)
.+.++|+++.++..++... + ..++++++..++||+.++.+|.++|||+|++|++++.++++.++.++
T Consensus 403 ~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~Gg~~p~~v~~~~~~~~~~~~~~~ 475 (502)
T PRK06705 403 MSLEQKKELHELCFKDVNIYLQEKFKIQLLEKEWEEIISPEAFIQKRNVYGGPSKKEMERMINNRKELFRKEE 475 (502)
T ss_pred HHHHhCCCHHHhhHHHHHhhhhhhhhhcCCHHHHHHHCCHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988776531 1 23567889999999999999999999999999999999988887654
No 7
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.2e-90 Score=702.93 Aligned_cols=380 Identities=56% Similarity=0.823 Sum_probs=367.6
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH 81 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh 81 (388)
++|+.||+|++||+++.+++|+.|+|||+|+||||+++|+++|++|+.+..+.++|..|+++|.++|++|++|+||||||
T Consensus 79 ~~~~~~d~~~~ie~~l~~~~g~~g~~iH~g~SrnD~~~Ta~~L~~r~~l~~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH 158 (459)
T PRK00855 79 FSPELEDIHMAIEARLTERIGDVGGKLHTGRSRNDQVATDLRLYLRDEIDEIAELLLELQKALLDLAEEHADTIMPGYTH 158 (459)
T ss_pred cCCCCCcHHHHHHHHHHHHhccccCcccCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCcC
Confidence 57899999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
+|||||+|||||+++|+++|.||++||.+++++++.+||||++++||++++||+++|++|||..+..|+++|+.+||+++
T Consensus 159 ~Q~A~P~T~G~~l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 238 (459)
T PRK00855 159 LQRAQPVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDRERTAELLGFDGVTENSLDAVSDRDFAL 238 (459)
T ss_pred CccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCHHHHHHHcCCCCCCCCHHHHHHccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 241 (388)
+++++++.++.+|+|||+|+++|+++||||+.+|+.+++||||||||+||+.+|+++++|.++.|+..+++.+++++|++
T Consensus 239 e~~~~l~~la~~L~ria~Dl~l~ss~e~gei~~p~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 318 (459)
T PRK00855 239 EFLSAASLLMVHLSRLAEELILWSSQEFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYGNLTGLLTVMKGLPLA 318 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCCCeEeCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCchHH
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999888999999
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV 321 (388)
Q Consensus 242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~ 321 (388)
|+||+++.|..+|+++..+..++..+..++++|+||+++|++++..++++++++++.|+++|+|||+||++|+++++.+.
T Consensus 319 ~~rD~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~~~m~~~l~~~~~~at~la~~Lv~~gi~~r~Ah~~v~~~~~~a~ 398 (459)
T PRK00855 319 YNRDLQEDKEPLFDAVDTLKLSLEAMAGMLETLTVNKERMREAAGKGFSTATDLADYLVRKGVPFREAHEIVGKAVREAE 398 (459)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHh
Q 016508 322 SKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL 381 (388)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~ 381 (388)
++|+++.++..+....+.+..++++.+++||+++|++|.+.|||+|+.+++++++++..+
T Consensus 399 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~~Gg~~~~~~~~~~~~~~~~~ 458 (459)
T PRK00855 399 ERGVDLADLSLEELQAFSPLITEDVYEVLTPEGSVAARNSIGGTAPEQVREQIARAKARL 458 (459)
T ss_pred HhCCCHHHHhHHHHHHhcccchHHHHHHhChHHHHHhcCCCCCCCHHHHHHHHHHHHhhc
Confidence 999999999988766655566788999999999999999999999999999999987764
No 8
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=9.2e-88 Score=682.12 Aligned_cols=379 Identities=54% Similarity=0.821 Sum_probs=363.3
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH 81 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh 81 (388)
++++.+|+|+++|++|++++|+.|+|||+|+||||+++|+++|++|+++..+.+.|..|+++|.++|++|++|+||||||
T Consensus 55 ~~~~~~~~~~~~e~~l~~~~g~~~~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh 134 (435)
T cd01359 55 LDPEDEDIHMAIERRLIERIGDVGGKLHTGRSRNDQVATDLRLYLRDALLELLELLLDLQRALLDRAEEHADTIMPGYTH 134 (435)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHhhhhccCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEecCCCC
Confidence 46788999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
+||||||||||||++|+++|.|+++||.+++++++.+||||++++||++++||+++|++|||..+..|.++++.+||+++
T Consensus 135 ~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaag~gt~~~~~~~~~a~~LG~~~~~~~~~~a~~~rd~~~ 214 (435)
T cd01359 135 LQRAQPITFGHYLLAYAEMLERDLERLADAYKRVNVSPLGAGALAGTTFPIDRERTAELLGFDGPTENSLDAVSDRDFVL 214 (435)
T ss_pred CccceeccHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCHHHHHHHcCCCCCccCHHHHHhcchHHH
Confidence 99999999999999999999999999999999999999999998899999999999999999988888778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 241 (388)
+++++++.++++|+|||+|+++|+++|+|||.+|+++++||||||||+||+.+|+++++++++.|...++..+..+.|++
T Consensus 215 e~~~~l~~~a~~l~ria~Dl~l~~~~e~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 294 (435)
T cd01359 215 EFLSAAALLMVHLSRLAEDLILWSTQEFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLA 294 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCCc
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999888888999
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHH-cCCChHHHHHHHHHHHHHH
Q 016508 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVN-KQVPFRTSHDIVGKAVALC 320 (388)
Q Consensus 242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~-~gi~~r~Ah~~v~~~~~~a 320 (388)
++||++..|..+++++..+..+++.+..++++|+||+++|++++..++++++++++.|++ +|+|||+||++|+++++.+
T Consensus 295 ~~~d~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~~~m~~~l~~~~~~a~~l~~~l~~~~g~~~r~Ah~~v~~~~~~a 374 (435)
T cd01359 295 YNKDLQEDKEPLFDAVDTLIASLRLLTGVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRAVRLA 374 (435)
T ss_pred cchhHHHhhHHHHHHHHHHHHHHHHHHHHHhhCEECHHHHHHHHhcCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred HHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHH
Q 016508 321 VSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAK 380 (388)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~ 380 (388)
.++|+++.++..++......++++++++++||++++.+|.++||++|+++++++.+++..
T Consensus 375 ~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~r~~~Gg~~~~~~~~~~~~~~~~ 434 (435)
T cd01359 375 EEKGKDLSDLTLAELQAISPLFEEDVREALDPENSVERRTSYGGTAPAEVREQIARARAL 434 (435)
T ss_pred HHcCCChhhcCHHHHHhhcccCHHHHHHhCCHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Confidence 999999999988775443456789999999999999999999999999999999988764
No 9
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=1e-86 Score=699.78 Aligned_cols=383 Identities=46% Similarity=0.750 Sum_probs=369.5
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH 81 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh 81 (388)
.++..||+|..+|++|++++|+.++|||+|+||||+++|+++|++|+++..+.+.|..|+++|.++|++|++|+||||||
T Consensus 77 ~~~~~ed~h~~ie~~L~~~~g~~~~~iH~g~S~nD~~~Ta~~L~~r~~~~~l~~~l~~l~~~l~~~a~~~~~t~m~grTH 156 (614)
T PRK12308 77 LLSDAEDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCRQQGQQLLLALDQLQQQMVNVAERHQGTVLPGYTH 156 (614)
T ss_pred CCCccccHHHHHHHHHHHHhcccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCcC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
+|||||+||||||++|+++|.||.+||.+++++++.+|||||+++||++|+||+++|+.|||..|..|++|++++||+++
T Consensus 157 ~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r~~~a~~LG~~~~~~n~~da~~~rd~~~ 236 (614)
T PRK12308 157 LQRAQPVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDREALAHNLGFRRATRNSLDSVSDRDHVM 236 (614)
T ss_pred CcccEEecHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCHHHHHHHhCCCCCcCCHHHHHcCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 241 (388)
+++++++.++.+|+|||+|+++|+|+|+|++++++++++||||||||+||+.+|.++++++++.|...+++.+.+++|++
T Consensus 237 e~~~~l~~~~~~l~ria~Dl~~~ss~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 316 (614)
T PRK12308 237 ELMSVASISMLHLSRLAEDLIFYNSGESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMTVKALPLA 316 (614)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHHHcCCchh
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV 321 (388)
Q Consensus 242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~ 321 (388)
|+||++++|..+++++..+..++..+..++++|+||++||++|+..++++++++++.|+++|+|||+||++|+++++.+.
T Consensus 317 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~la~~L~~~g~~~r~Ah~~v~~~v~~a~ 396 (614)
T PRK12308 317 YNKDMQEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANATELADYLVAKGIPFREAHHIVGVAVVGAI 396 (614)
T ss_pred hccchhhhHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhhcc
Q 016508 322 SKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGIN 384 (388)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~~~ 384 (388)
++|+++.++..++...+.....+++.+++||+.++++|...|||+|+.+++++.++++.++.+
T Consensus 397 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~v~~~~~~~~~~l~~~ 459 (614)
T PRK12308 397 AKGCALEELSLEQLKEFSDVIEDDVYQILTIESCLEKRCALGGVSPEQVAYAVEQADKRLAAR 459 (614)
T ss_pred HcCCChhhCCHHHHHHhhhhhhHHHHHhCCHHHHHHhccCCCCCCHHHHHHHHHHHHHHhcCC
Confidence 999999999988755555666778999999999999999999999999999999999988764
No 10
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.8e-82 Score=690.06 Aligned_cols=375 Identities=31% Similarity=0.397 Sum_probs=351.2
Q ss_pred CCCCCCchHHHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYT 80 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grT 80 (388)
.+++.||+|+++|++|++++| +.|+|+|+|||||||++|+++|++|+.+..+.+.|..|+++|.++|++|++|+|||||
T Consensus 483 ~~~~~~~~~~~~e~~L~~~~g~~~~~~lH~grSrnD~v~T~~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~g~T 562 (887)
T PRK02186 483 ARPAPRGLYMLYEAYLIERLGEDVGGVLQTARSRNDINATTTKLHLREATSRAFDALWRLRRALVFKASANVDCALPIYS 562 (887)
T ss_pred CCCCCcchHHHHHHHHHHHhChhhhcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCc
Confidence 467889999999999999999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHH
Q 016508 81 HLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFV 160 (388)
Q Consensus 81 h~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~ 160 (388)
|+|||||||||||+++|+++|.||++||.+++++++.+|||||+++||++++||+++|++|||..+..|+.+|+++||++
T Consensus 563 H~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~~~~a~~LGf~~~~~n~~da~~~rd~~ 642 (887)
T PRK02186 563 QYQPALPGSLGHYLLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDPEFVARLLGFEQPAPNSLDAVASRDGV 642 (887)
T ss_pred cCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCHHHHHHHcCCCCCccCHHHHHcccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcc
Q 016508 161 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240 (388)
Q Consensus 161 ~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 240 (388)
+++++++++++.+|+|||+|+++|+++||||+.+|+++++|||||||||||+.+|.++++++++.|...++++...+.|+
T Consensus 643 ~e~~~~l~~~~~~l~ria~Dl~~~~~~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~ir~~~~~~~g~~~~~~~~~~~~~~ 722 (887)
T PRK02186 643 LHFLSAMAAISTVLSRLAQDLQLWTTREFALVSLPDALTGGSSMLPQKKNPFLLEFVKGRAGVVAGALASASAALGKTPF 722 (887)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcEECCCccccccCCCCCCCCCcHHHHHHHHHHHHhhHHHHHHHHHccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred cccccc-ccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHc-CCChHHHHHHHHHHHH
Q 016508 241 AYNRDL-QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK-QVPFRTSHDIVGKAVA 318 (388)
Q Consensus 241 ~~~rd~-~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~-gi~~r~Ah~~v~~~~~ 318 (388)
+++.|. |+.|..+++++..+..++..+..++++|+||+++|++++..++.++|+++++|+++ |+|||+||++|+++++
T Consensus 723 ~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~at~la~~L~~~~g~~fr~Ah~~v~~~v~ 802 (887)
T PRK02186 723 SNSFEAGSPMNGPIAQACAAIEDAAAVLVLLIDGLEADQARMRAHLEDGGVSATAVAESLVVRRSISFRSAHTQVGQAIR 802 (887)
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhCEECHHHHHHHHhcCcchHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 877774 77899999999999999999999999999999999999999888899999999995 9999999999999999
Q ss_pred HHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhhccc
Q 016508 319 LCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINR 385 (388)
Q Consensus 319 ~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~~~~ 385 (388)
.+.++|.++.+.+.+... .+.. ..|+..+++|.++|||+|+.|++++.++++.++.+.
T Consensus 803 ~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~r~~~gg~~~~~v~~~~~~~~~~l~~~~ 860 (887)
T PRK02186 803 QSLDQGRSSADALAALDP----QFVS-----RAPLEWARSHRFGGGPGAADLNAGLARACAALRDDE 860 (887)
T ss_pred HHHhcCCcccchHHHhhh----hhcc-----chHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999877766654311 1111 126778889999999999999999999988886643
No 11
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=4.3e-79 Score=607.75 Aligned_cols=312 Identities=24% Similarity=0.304 Sum_probs=296.8
Q ss_pred CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH 81 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh 81 (388)
++|++||+|+++|++|++++|+.||++|+||||||++.|++||++|+.+..+...+..++++|+++ |.+|+||||||
T Consensus 74 ~~~~~EDvh~~iE~~L~~~~G~~gg~lhtgRSRNDqvat~~RL~~r~~~~~~~~~l~~l~~~l~~~---~~dtimpGyTH 150 (434)
T PRK06389 74 IDLDLEDVHTAIENFVIRRCGDMFKNFRLFLSRNEQVHADLNLFIIDKIIEIEKILYEIIKVIPGF---NLKGRLPGYTH 150 (434)
T ss_pred CCCCCCchHHHHHHHHHHHhchhhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCceeccccc
Confidence 689999999999999999999999999999999999999999999999999999999999999965 99999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHH-H
Q 016508 82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDF-V 160 (388)
Q Consensus 82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~-~ 160 (388)
+|||||+|||||+++|+++|.||++||.+++++++.+|||+|+++||++++||+++|++|||..+..|+++++.++|+ +
T Consensus 151 lQ~AqP~TfG~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr~~~A~lLGf~~~~~n~~~a~~~~~~~~ 230 (434)
T PRK06389 151 FRQAMPMTVNTYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKFNQMSELLGMEKNIKNPVYSSSLYIKTI 230 (434)
T ss_pred cCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhHHHHHHHhCCCCCCCCCchhhhccchHH
Confidence 999999999999999999999999999999999999999999988999999999999999999988898877667655 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcc
Q 016508 161 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240 (388)
Q Consensus 161 ~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 240 (388)
++++++++.++.+|+|||+|+++|+|+ |++++|+.+++||||||||+||+.+|.++++|.++.|.+.++.....|.|+
T Consensus 231 ~e~~~~la~la~~LsRiA~Dl~l~ss~--g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~n~~~ 308 (434)
T PRK06389 231 ENISYLISSLAVDLSRICQDIIIYYEN--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKTT 308 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 899999999999999999999999996 888889999999999999999999999999999999999999999999999
Q ss_pred ccccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 016508 241 AYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALC 320 (388)
Q Consensus 241 ~~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a 320 (388)
+|++|+|+.+.++++++..+..+++++..++++++||+++ ++.+..++. +|++|+.++++|+|||+||++|+++|+.+
T Consensus 309 ~y~~D~q~~~~~~~~~~~~~~~~l~l~~~~i~~l~~~~~~-~~a~~~~~~-ATdlA~~lv~~GipFR~AH~~Vg~~V~~~ 386 (434)
T PRK06389 309 GYHRDFQIVKDSTISFINNFERILLGLPDLLYNIKFEITN-EKNIKNSVY-ATYNAWLAFKNGMDWKSAYAYIGNKIREG 386 (434)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeECHHH-HhhccCCCc-HHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 555545554 99999999999999999999999999864
No 12
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=2.9e-78 Score=612.74 Aligned_cols=357 Identities=23% Similarity=0.274 Sum_probs=327.1
Q ss_pred CCCchHHHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccc
Q 016508 5 DREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 83 (388)
Q Consensus 5 ~~ed~~~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q 83 (388)
+.++.+.++|++|++++| +.|+|||+||||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++|+||||||+|
T Consensus 69 ~~~~~v~a~e~~l~e~~g~~~g~~lH~grSrnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q 148 (437)
T cd01597 69 RTGHPAIPLVKQLTAACGDAAGEYVHWGATTQDIIDTALVLQLRDALDLLERDLDALLDALARLAATHRDTPMVGRTHLQ 148 (437)
T ss_pred HhCCCcHHHHHHHHHHcCccccCeeecCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeehhhcCc
Confidence 455667799999999999 6699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCC----HHHHHHHhCCCCCCCCchhhhhchHH
Q 016508 84 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPID----RFMTAEALEFTAPMRNSIDAVSDRDF 159 (388)
Q Consensus 84 ~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~----r~~~a~~LG~~~~~~n~~~a~~~rd~ 159 (388)
|||||||||||++|+++|.||++||.+++++++.+||||++++|++++.+ |+++|+.|||..+. .+|+++||+
T Consensus 149 ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGga~Gtg~~~~~~~~~~~~~~a~~LGf~~~~---~~~~~~rd~ 225 (437)
T cd01597 149 HALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGGAAGTLASLGDQGLAVQEALAAELGLGVPA---IPWHTARDR 225 (437)
T ss_pred cceechHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccCCcHHHHHHHHHHHcCCCCCC---CccccCcHH
Confidence 99999999999999999999999999999999999999988888888874 89999999998764 356899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcC
Q 016508 160 VLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGL 238 (388)
Q Consensus 160 ~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~-~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~ 238 (388)
+++++++++.++.+|+|||+|+++|+++||||+.+|+ ++++||||||||+||+.+|.++++|.++.|...+++. +.
T Consensus 226 ~~e~~~~l~~~a~~l~rla~Dl~l~s~~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~---~~ 302 (437)
T cd01597 226 IAELASFLALLTGTLGKIARDVYLLMQTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALARRVPGLAALLLD---AM 302 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccceeecccCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHH---hc
Confidence 9999999999999999999999999999999999986 6899999999999999999999999999999876654 45
Q ss_pred cccccccc---ccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHH
Q 016508 239 PLAYNRDL---QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIV 313 (388)
Q Consensus 239 ~~~~~rd~---~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v 313 (388)
..+|+||+ +..|..+++++..+..++..+..++++|+||+++|++++.. ++.+++.++..|++ |+|||+||++|
T Consensus 303 ~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~ae~l~~~l~~-~i~~~~Ah~~v 381 (437)
T cd01597 303 VQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVMMALAP-KLGRQEAHDLV 381 (437)
T ss_pred hhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 58999998 66688899999999999999999999999999999999965 46679999999987 69999999999
Q ss_pred HHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHH
Q 016508 314 GKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLH 375 (388)
Q Consensus 314 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~ 375 (388)
+++++.+.++|+++.++..++......++++++++++||++ +.|++|..++++++
T Consensus 382 ~~~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~-------~v~~a~~~~~~~~~ 436 (437)
T cd01597 382 YEACMRAVEEGRPLREVLLEDPEVAAYLSDEELDALLDPAN-------YLGSAPALVDRVLA 436 (437)
T ss_pred HHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHhcCHHH-------HhcchHHHHHHHHh
Confidence 99999999999999999987644222356888999999997 55799999998863
No 13
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=2.4e-78 Score=614.66 Aligned_cols=363 Identities=21% Similarity=0.279 Sum_probs=329.2
Q ss_pred CCCchHHHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccc
Q 016508 5 DREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 83 (388)
Q Consensus 5 ~~ed~~~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q 83 (388)
+.++.+.++|++|++++| +.++|||+|+||||+++|+++|++|+.+..+.+.|..++++|.++|++|++|+||||||+|
T Consensus 73 ~~~~~v~~~e~~L~~~~~~~~~~~vH~g~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q 152 (449)
T PRK08540 73 EIHHDIMAVVKALSEVCEGDAGEYVHFGATSNDIIDTATALQLKDSLEILEEKLKKLRGVLLKKAEEHKNTVCIGRTHGQ 152 (449)
T ss_pred HhCCCcHHHHHHHHHHhhhhhhcceecCccHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhcCCC
Confidence 345556899999999995 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCcc-----ccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchH
Q 016508 84 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGAC-----ALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRD 158 (388)
Q Consensus 84 ~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~-----a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd 158 (388)
|||||||||||++|+++|.||++||.+++++++.+||||+ +++|++++++ +++|+.|||..+..| +++++||
T Consensus 153 ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgavGt~~a~~~~~~~i~-~~~a~~LGl~~~~~~--~~~~~rd 229 (449)
T PRK08540 153 HAVPTTYGMRFAIWASEIQRHLERLEQLKPRVCVGQMTGAVGTQAAFGEKGIEIQ-KRVMEILGLKPVLIS--NQVIQRD 229 (449)
T ss_pred cCeehhHHHHHHHHHHHHHHHHHHHHHHHHhhheccccccccchhhCCCccHHHH-HHHHHHcCCCCCCCc--CCccccH
Confidence 9999999999999999999999999999999999999972 2333445565 589999999977544 3679999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhc
Q 016508 159 FVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKG 237 (388)
Q Consensus 159 ~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~ 237 (388)
++++++++++.++++|+|||+|+++|+++|||||.++ +++++||||||||+||+.+|.++++|..+.|.... .+.+
T Consensus 230 ~~~e~~~~l~~~a~~l~kia~Dl~l~s~~e~gei~e~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~---~~~~ 306 (449)
T PRK08540 230 RHAEFMMFLANIATTLDKIGLEIRNLQRTEIGEVEEEFGKKQVGSSTMPHKRNPITSEQICGLARVVRSNVEP---ALLN 306 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHH---HHhc
Confidence 9999999999999999999999999999999999764 47799999999999999999999999999998864 4568
Q ss_pred Cccccccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcc--cChhHHHHHHHHHHHcCCChHHHHHH
Q 016508 238 LPLAYNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP--AGYLDATTLADYLVNKQVPFRTSHDI 312 (388)
Q Consensus 238 ~~~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~--~~~~~a~~la~~L~~~gi~~r~Ah~~ 312 (388)
+|++|+||++++ |..+++++..+..++..+..++++|+||+++|++++. .+++++|++++.|+++|+|||+||++
T Consensus 307 ~~~~~~rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~glg~~~Ah~~ 386 (449)
T PRK08540 307 NPLWDERDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPENIRRNLELTKGLIMAEAVMIELAKRGMGRQEAHEL 386 (449)
T ss_pred chhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 999999999875 6778999999999999999999999999999999997 46888999999999999999999999
Q ss_pred HHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHH
Q 016508 313 VGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAK 380 (388)
Q Consensus 313 v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~ 380 (388)
|+++++.+.++|+++.++..++......++++++++++||+. ++|++|..|++++.++++.
T Consensus 387 v~~l~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~-------~~g~a~~~v~~~~~~~~~~ 447 (449)
T PRK08540 387 VRQAAMKAHEEGRHLKEVLLEDEEVMKYLTEEELEELLDPET-------YIGTAPEIVENVIEKLKEW 447 (449)
T ss_pred HHHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHHcCHHH-------hcCchHHHHHHHHHHHHHh
Confidence 999999999999999999887632223467889999999996 8899999999999887654
No 14
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=3.4e-78 Score=610.72 Aligned_cols=357 Identities=17% Similarity=0.195 Sum_probs=320.7
Q ss_pred CCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccc
Q 016508 4 TDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 83 (388)
Q Consensus 4 ~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q 83 (388)
+..+|+ .++++.|.+++|+.++|||+|+|||||++|+++|++|+.+..+.+.+..++++|.++|++|++||||||||+|
T Consensus 65 ~~~~dv-~~~v~~L~e~~g~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q 143 (442)
T PRK08470 65 TTKHDL-IAFLTSVSESLGEESRFVHYGMTSSDCIDTAVALQMRDSLKLIIEDVKNLMEAIKKRALEHKDTLMVGRSHGI 143 (442)
T ss_pred ccCCCh-HHHHHHHHHHccccccceecCCChhchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCC
Confidence 567899 5777999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCC-HHHHHHHhCCCCCCCCchhhhhchHHHHH
Q 016508 84 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPID-RFMTAEALEFTAPMRNSIDAVSDRDFVLE 162 (388)
Q Consensus 84 ~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~-r~~~a~~LG~~~~~~n~~~a~~~rd~~~e 162 (388)
||||||||||+++|+++|.||++||.+++++++.+||||+++++++++.+ ++++|+.|||..+.. + .++.+||++++
T Consensus 144 ~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~lgGAvGt~a~~~~~v~~~~a~~LGl~~~~~-~-~~v~~RD~~~e 221 (442)
T PRK08470 144 HGEPITFGLVLAIWYDEIKRHLKALEHTMEVISVGKISGAMGNFAHAPLELEELVCEELGLKPAPV-S-NQVIQRDRYAR 221 (442)
T ss_pred cCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcchhcccccCChHHHHHHHHHcCCCCCCC-C-CCccCcHHHHH
Confidence 99999999999999999999999999999999999998755444445544 789999999985421 1 26799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508 163 FLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241 (388)
Q Consensus 163 ~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~ 241 (388)
++++++.++++|+|||+|+++|+++|++|+..+ .++++|||||||||||+.+|+++++++.+.|... ..++++|++
T Consensus 222 ~~~~La~~a~~L~ria~Di~~l~~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~---~~~~~~~~~ 298 (442)
T PRK08470 222 LASALALLASSCEKIAVAIRHLQRTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGLCRVIRSFAT---PALENVALW 298 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHH---HHHHhchHh
Confidence 999999999999999999999999999999764 3567999999999999999999999999999975 455789999
Q ss_pred cccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHHHHH
Q 016508 242 YNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGKA 316 (388)
Q Consensus 242 ~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v~~~ 316 (388)
|+||++++ |..+|+++..+..+++.+..++++|+||+++|++|++. ++++++++++.|+++|+|||+||++|+++
T Consensus 299 ~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~nl~~~~g~~~ae~l~~~L~~~G~~~~~Ah~~V~~~ 378 (442)
T PRK08470 299 HERDISHSSVERFILPDAFITTDFMLHRLNNVIENLVVYPENMMKNLNLTGGLVFSQRVLLELPKKGVSREDAYKIVQRN 378 (442)
T ss_pred hccCCchhHHHhhhHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999763 66799999999999999999999999999999999975 78889999999999999999999999999
Q ss_pred HHHHHHc---CCC---------hHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHH
Q 016508 317 VALCVSK---ECQ---------LQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQ 373 (388)
Q Consensus 317 ~~~a~~~---~~~---------~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~ 373 (388)
+..+.++ |.+ |.+.+.++......+++++|++++||+. |.|.++..+++.
T Consensus 379 ~~~a~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~dp~~-------~~g~~~~~~~~~ 440 (442)
T PRK08470 379 AMKVWEDLQQGKAAINEKGESLFLQALLNDEDLRKSLSEEEIRACFDYSY-------YTKNVDAIFKRV 440 (442)
T ss_pred HHHHHHHhhcCCCccccccHHHHHHHHhcCHHhHhcCCHHHHHHHhCHHH-------HHhhHHHHHHHH
Confidence 9999999 999 8888876643223467888999999996 788888887765
No 15
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=6e-78 Score=606.88 Aligned_cols=350 Identities=19% Similarity=0.205 Sum_probs=322.8
Q ss_pred HHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccccch
Q 016508 10 HMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVL 89 (388)
Q Consensus 10 ~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~P~T 89 (388)
..++|+.|++++|+.++|||+|+|||||++|+++|++|+++..+.+.|..++++|.++|++|++|+||||||+|||+|||
T Consensus 73 v~a~~~~L~~~~g~~~~~vH~G~Ts~Di~dTa~~L~lr~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T 152 (435)
T PRK07492 73 VIAFLTHLAEFVGPDARFVHQGMTSSDVLDTCLNVQLVRAADLLLADLDRVLAALKKRAFEHKDTPTIGRSHGIHAEPTT 152 (435)
T ss_pred hHHHHHHHHHHhhHhhhhhcCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEeeccCCccceehh
Confidence 35899999999997799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCH---HHHHHHhCCCCCCCCchhh-hhchHHHHHHHH
Q 016508 90 LQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR---FMTAEALEFTAPMRNSIDA-VSDRDFVLEFLS 165 (388)
Q Consensus 90 fG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r---~~~a~~LG~~~~~~n~~~a-~~~rd~~~e~~~ 165 (388)
|||||++|+++|.|+++||.+++++++.+|||| |+ ||++++|+ +++|+.|||..+ +.+| +.+||+++++++
T Consensus 153 fG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgG-Av-GT~~~~~~~~~~~~a~~LGl~~~---~~~~~v~~RD~~~e~~~ 227 (435)
T PRK07492 153 FGLKLARFYAEFARNRERLVAAREEIATCAISG-AV-GTFANIDPRVEEHVAKKLGLKPE---PVSTQVIPRDRHAMFFA 227 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcc-cc-cCCccCChHHHHHHHHHhCCCCC---CccccccccHHHHHHHH
Confidence 999999999999999999999999999999975 55 99999997 789999999864 3454 699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcccccc
Q 016508 166 ANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 244 (388)
Q Consensus 166 ~l~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~r 244 (388)
+++.++++|+|||+|+++|+++|++|+..+ .++++|||+||||+||+.+|+++++++.+.|...+ +++++|++|+|
T Consensus 228 ~la~~~~~L~ria~Di~~l~~~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~~~~~~---~~~~~~~~~eR 304 (435)
T PRK07492 228 TLGVIASSIERLAIEIRHLQRTEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTGLARLVRSYVVP---AMENVALWHER 304 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhccccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH---HHHhcchhhcc
Confidence 999999999999999999999999999764 35679999999999999999999999999999654 55689999999
Q ss_pred ccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 016508 245 DLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGKAVAL 319 (388)
Q Consensus 245 d~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~ 319 (388)
|++.+ |..+|+++..+..++..+..++++|+||+++|++|++. ++++++++++.|+++|+|||+||++|+++++.
T Consensus 305 D~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~i~ae~~~~~L~~~g~~r~~Ah~~V~~~~~~ 384 (435)
T PRK07492 305 DISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNKFGGLVHSQRVLLALTQAGVSREDAYRLVQRNAMK 384 (435)
T ss_pred CChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhcCChhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99743 56789999999999999999999999999999999985 78889999999999999999999999999999
Q ss_pred HHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHH
Q 016508 320 CVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 374 (388)
Q Consensus 320 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~ 374 (388)
+.++|.+|.+++.++......+++++|++++||+. |.|.++..+++.+
T Consensus 385 a~~~~~~l~e~l~~~~~~~~~l~~~el~~~~dp~~-------ylg~~~~~~~~~~ 432 (435)
T PRK07492 385 VWEQGGDFLEELKADPEVRAALSEEEIEELFDLGY-------HTKHVDTIFKRVF 432 (435)
T ss_pred HHHhCCCHHHHHhCCHHhHhcCCHHHHHHHhCHHH-------HhcchHHHHHHHh
Confidence 99999999999987653333467888999999996 8899999988875
No 16
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4.2e-77 Score=600.08 Aligned_cols=348 Identities=16% Similarity=0.189 Sum_probs=319.6
Q ss_pred HHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccccchh
Q 016508 11 MNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLL 90 (388)
Q Consensus 11 ~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~P~Tf 90 (388)
.++.+.+++.+|+.++|||+|+|||||++|+++|++|+.+..+.+.|..++++|.++|++|++||||||||+||||||||
T Consensus 71 ~a~v~~l~~~~g~~~~~vH~G~Ts~Di~dTa~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~Tf 150 (431)
T PRK07380 71 IAFLTNVNEYVGDAGRYIHLGMTSSDVLDTGLALQLVASLDLLLEELEDLIQAIRYQAREHRNTVMIGRSHGIHAEPITF 150 (431)
T ss_pred HHHHHHHHHHHHHhhccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeechhcCccceechH
Confidence 45778899999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHH---HHHHHhCCCCCCCCchhhhhchHHHHHHHHHH
Q 016508 91 QHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF---MTAEALEFTAPMRNSIDAVSDRDFVLEFLSAN 167 (388)
Q Consensus 91 G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~---~~a~~LG~~~~~~n~~~a~~~rd~~~e~~~~l 167 (388)
||||++|+++|.|+++||.+++++++.+||| ||+ ||++++|++ ++++.|||..+.. + +++.+||+++++++++
T Consensus 151 G~~~a~~~~~l~r~~~RL~~~~~~~~~~~l~-GAv-Gt~~~~~~~~~~~~a~~LGl~~~~~-~-~~v~~rd~~~e~~~~l 226 (431)
T PRK07380 151 GFKLAGWLAETLRNRERLVRLREDIAVGQIS-GAV-GTYANTDPRVEAITCQKLGLKPDTA-S-TQVISRDRHAEYVQTL 226 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-hhh-cCcccCChhHHHHHHHHcCCCCCCC-C-CCccCcHHHHHHHHHH
Confidence 9999999999999999999999999999995 677 999999987 8999999987643 2 3679999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcccccccc
Q 016508 168 SIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 246 (388)
Q Consensus 168 ~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~ 246 (388)
+.++++|+|||+|+++|++.+++|+..+ ..+++|||+||||+||+.+|+++++|+.+.|...+ .++++|++||||+
T Consensus 227 a~~a~~L~kia~Di~~l~~~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~g~~~~---~~~~~~~~~eRD~ 303 (431)
T PRK07380 227 ALVGASLERFATEIRNLQRTDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSGLARVLRSYAVA---ALENVALWHERDI 303 (431)
T ss_pred HHHHHHHHHHHHHHHHhcccCceeecccCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHHhchhhhccCc
Confidence 9999999999999999999999998653 24568999999999999999999999999999975 4568999999999
Q ss_pred ccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcc--cChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508 247 QED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP--AGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV 321 (388)
Q Consensus 247 ~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~--~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~ 321 (388)
+++ |..+|+++..+..++..+..++++|+||+++|++|+. .++++++++++.|+++|+|||+||++|+++++.+.
T Consensus 304 ~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~~~ae~~~~~Lv~~gl~r~~Ah~~V~~~~~~a~ 383 (431)
T PRK07380 304 SHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPENMRRNMNIYGGVVFSQRVLLALVEKGMSREEAYRLVQKNAHTAW 383 (431)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 863 6789999999999999999999999999999999997 57888999999999999999999999999999999
Q ss_pred H-cCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHH
Q 016508 322 S-KECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTE 372 (388)
Q Consensus 322 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~ 372 (388)
+ +|.++.|++.++......+++++|++++||+. |.|.++..+++
T Consensus 384 ~~~~~~l~e~l~~~~~~~~~l~~~~l~~~~dp~~-------ylg~~~~~~~~ 428 (431)
T PRK07380 384 NTEGGNFRANLEADPEVTQLLSAAELADCFDPQL-------HLKNLDVIYQR 428 (431)
T ss_pred HHhCCCHHHHHHcChHhhhcCCHHHHHHhhCHHH-------HhcchHHHHHH
Confidence 9 99999999988753333467888999999996 88888877664
No 17
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.5e-76 Score=601.08 Aligned_cols=364 Identities=20% Similarity=0.204 Sum_probs=324.9
Q ss_pred CCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccc
Q 016508 6 REDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 85 (388)
Q Consensus 6 ~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A 85 (388)
.+|+ .++|++|++++|+.++|||+|+||||+++|+++|++|+.+..+.+.|..|+++|..+|++|++|+||||||+|||
T Consensus 75 ~~dv-~~~~~~L~~~~g~~~~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A 153 (451)
T PRK06390 75 KHDV-MALVEALSEQCSAGKNYVHFGVTSNDINDTATALQIHDFVSIIKDDIKNLMETLIKLIDEYKDSPMMGRTHGQHA 153 (451)
T ss_pred CCCc-HHHHHHHHHHhhhhhhheecCccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhCCCcC
Confidence 5699 899999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhhc----cccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 86 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMN----FCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 86 ~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~----~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
|||||||||++|+++|.||++||.+++++++ .+|+|+++.+|++++.+++++|+.|||+.+. ..+++++||+++
T Consensus 154 ~P~T~G~~~~~~~~~l~r~~~RL~~~~~r~~~~~~~gavGt~a~~g~~~~~~~~~~a~~LGl~~~~--~~~~~~~rD~~~ 231 (451)
T PRK06390 154 SPITFGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLGPVGTGAALGKDALDIQNRVMEILGIYSEI--GSTQIVNRDRYI 231 (451)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhcChhhCCCcHHHHHHHHHHHcCCCCCC--CccccccchHHH
Confidence 9999999999999999999999999999999 5555555555666667789999999998753 345789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccc--cCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFIT--PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLP 239 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~--~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~ 239 (388)
+++++++.++++|+|||+|+++|+|+|+||+. +++++++||||||||+||+.+|.+++++..+.+.... ...+++
T Consensus 232 e~~~~l~~la~~l~kia~Di~l~ss~e~g~v~E~~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~~~~l~~~---~~~~~~ 308 (451)
T PRK06390 232 EYLSVINGISVTLEKIATEIRNLQRPEIDEVSEYFDEESQVGSSSMPSKVNPINSENVVSLSRFIRSLIIP---EYEAGV 308 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCCCCCccCCCCCCCcHHHHHHHHHHHHHHHhHHH---HHHhhh
Confidence 99999999999999999999999999999996 3456899999999999999999999999777776652 334567
Q ss_pred cccccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccC-hhHHHHHHHHHHHcCCChHHHHHHHHH
Q 016508 240 LAYNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAG-YLDATTLADYLVNKQVPFRTSHDIVGK 315 (388)
Q Consensus 240 ~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~-~~~a~~la~~L~~~gi~~r~Ah~~v~~ 315 (388)
.+|+||+++. |..+++.+..+..++..+..++++|+||++||++|+..+ +++++++++.|+++|+|||+||++|++
T Consensus 309 ~~~erd~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~se~la~~L~~~G~~~~~Ah~~v~~ 388 (451)
T PRK06390 309 TWHERDLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLESDDSIMSESIVRALTLSGMPRQDAHEFVRR 388 (451)
T ss_pred HhhccCCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHhccchhhHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 7799998764 444678888899999999999999999999999999876 455888999999999999999999999
Q ss_pred HHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhhc
Q 016508 316 AVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI 383 (388)
Q Consensus 316 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~~ 383 (388)
+++.+.++|+++.++..++ .....++++++++++||++ +.|++|..+++++++++..++.
T Consensus 389 ~~~~a~~~g~~l~~~~~~~-~~~~~l~~~~l~~~ldP~~-------~i~~a~~~v~~~~~~~~~~~~~ 448 (451)
T PRK06390 389 ASMEARSNGKSLKSSLIEA-GILKYIDEKTLDRAMDPAN-------FIGQAPSICDNVVNNAERRMKD 448 (451)
T ss_pred HHHHHHHhCCCHHHHHHhC-hhhhcCCHHHHHHhcCHHH-------HhhhhHHHHHHHHHHHHHHhhc
Confidence 9999999999999988776 3233356778999999997 5579999999999998888764
No 18
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=3.4e-76 Score=597.03 Aligned_cols=351 Identities=24% Similarity=0.272 Sum_probs=320.6
Q ss_pred CchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccc
Q 016508 7 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 86 (388)
Q Consensus 7 ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~ 86 (388)
+|+ .++|++|++++|+.++|||+|+||||+++|+++|++|+.+..+.+.+..++++|.++|++|++|+||||||+||||
T Consensus 71 ~~v-~~~e~~l~~~~g~~~~~vh~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~ 149 (435)
T TIGR00928 71 HDV-KAVVYALKEKCGAEGEFIHFGATSNDIVDTALALLLRDALEIILPKLKQLIDRLKDLAVEYKDTVMLGRTHGQHAE 149 (435)
T ss_pred cCh-HHHHHHHHHHhhhhhhheeecccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHhHHhcCCCCc
Confidence 455 8999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCH------HHHHHHhCCCCCCCCchhhhhchHHH
Q 016508 87 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR------FMTAEALEFTAPMRNSIDAVSDRDFV 160 (388)
Q Consensus 87 P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r------~~~a~~LG~~~~~~n~~~a~~~rd~~ 160 (388)
||||||||++|+++|.|+++||.+++++++.+|+|| ++ ||++++++ +++|+.|||+.+. +++ ++.+||++
T Consensus 150 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-a~-Gt~~~~~~~~~~~~~~~a~~LGl~~~~-~~~-~~~~rD~~ 225 (435)
T TIGR00928 150 PTTLGKKFALWADEMKRQLERLLQAKERIKVGGISG-AV-GTHAAAYPLVEEVEERVTEFLGLKPVP-IST-QIEPRDRH 225 (435)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-hh-hhHhhccccHHHHHHHHHHhcCCCCCC-CCc-cccccHHH
Confidence 999999999999999999999999999999999986 54 99999987 8999999999776 334 78999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCc
Q 016508 161 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLP 239 (388)
Q Consensus 161 ~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~-~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~ 239 (388)
++++++++.++.+|+|||+|+++|++++++|+.+|. ++++||||||||+||+.+|+++++|..+.|..+.++ .++|
T Consensus 226 ~e~~~~l~~la~~L~ria~Dl~l~s~~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~---~~~~ 302 (435)
T TIGR00928 226 AELLDALALLATTLEKFAVDIRLLQRTEHFEVEEPFGKGQVGSSAMPHKRNPIDFENVCGLARVIRSVLSPAL---ENVP 302 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccceecccCCCCCCcCCCCcCcCcHHHHHHHHHHHHHHHHHHHHH---HHhh
Confidence 999999999999999999999999999999997653 456999999999999999999999999999997655 3679
Q ss_pred cccccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccC--hhHHHHHHHHHHHcCCChHHHHHHHH
Q 016508 240 LAYNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAG--YLDATTLADYLVNKQVPFRTSHDIVG 314 (388)
Q Consensus 240 ~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~--~~~a~~la~~L~~~gi~~r~Ah~~v~ 314 (388)
++|+||.++. |..+++++..+..++..+..++++|+||+++|++++..+ +++++++++.|+++|+|||+||++|+
T Consensus 303 ~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~a~~la~~L~~~g~g~~~Ah~~v~ 382 (435)
T TIGR00928 303 LWHERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPENILRNLELTLGLIASERVLIALVERGMGREEAYEIVR 382 (435)
T ss_pred HHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHhHHHHHHHHHHhCCChhhHHHHHH
Confidence 9999999764 446999999999999999999999999999999999864 56799999999999999999999999
Q ss_pred HHHHHHHH-cCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHH
Q 016508 315 KAVALCVS-KECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTE 372 (388)
Q Consensus 315 ~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~ 372 (388)
++++.+.+ +|.++.++..++......++++++++++||++ |.|.+++.+++
T Consensus 383 ~~~~~a~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ldp~~-------~~~~a~~~~~~ 434 (435)
T TIGR00928 383 ELAMGAAEVDEPDLLEFLLADERITKYLKEEELAELLDPET-------YIGNAREIVER 434 (435)
T ss_pred HHHHHHHHcccccHHHHHhhCccchhhcCHHHHHHcCCHHH-------HhChHHHHHHh
Confidence 99999999 99999999887642223467889999999997 66778877764
No 19
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=1.5e-75 Score=594.84 Aligned_cols=338 Identities=24% Similarity=0.278 Sum_probs=316.3
Q ss_pred CCchHHHHHHH----HHHHhC-CCCCc--cc------cCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016508 6 REDVHMNIEAA----LTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNE 72 (388)
Q Consensus 6 ~ed~~~~~E~~----l~~~~g-~~~~~--lH------~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~ 72 (388)
.||+|+++|.. +.+++| +.++| +| +|+||||+++|+++|++|+++..+.+.|..|+++|.++|++|+
T Consensus 102 ~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~ 181 (472)
T PRK12273 102 GTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLSLRKLLDALEQLQEAFEAKAKEFA 181 (472)
T ss_pred cchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 78998888877 456888 66777 99 9999999999999999999999999999999999999999999
Q ss_pred CccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHH-------HHHHhCCCC
Q 016508 73 GLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFM-------TAEALEFTA 145 (388)
Q Consensus 73 ~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~-------~a~~LG~~~ 145 (388)
+|+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+ ||++++||++ +|+.|||..
T Consensus 182 dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~plGg~Av-GT~~~i~~~~~~~v~~~~A~~LGf~~ 260 (472)
T PRK12273 182 DILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVNLGATAI-GTGLNAPPGYIELVVEKLAEITGLPL 260 (472)
T ss_pred CCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccce-eCCCCCChhHHHHHHHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999999999999999898 9999999864 699999984
Q ss_pred -CCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccCCCCCCCCCCCCCCCCccHHHHHHHHH
Q 016508 146 -PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKS 221 (388)
Q Consensus 146 -~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e---~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a 221 (388)
+..|+++++++||++++++++++.++++|+|||+|+++|+|+| ||||.+|+ +++|||||||||||+.+|.++++|
T Consensus 261 ~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e~gev~lp~-~~~GSSiMPqKrNP~~~E~ir~~a 339 (472)
T PRK12273 261 VPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPA-VQAGSSIMPGKVNPVIPEVVNQVC 339 (472)
T ss_pred ccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCceEEECCC-CCCcCCCCCcccCcHHHHHHHHHH
Confidence 6679999999999999999999999999999999999999766 99999985 899999999999999999999999
Q ss_pred HHHHhhHHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHHH
Q 016508 222 ARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYLV 300 (388)
Q Consensus 222 ~~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~ 300 (388)
+++.|+..+++.+.+++|++++++.+..+..+++++..+..++..+. .++++|+||+++|++|+..++.+++++++.|
T Consensus 340 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~LA~~L- 418 (472)
T PRK12273 340 FQVIGNDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNACRTLREKCIDGITANEERCREYVENSIGIVTALNPYI- 418 (472)
T ss_pred HHHhhhHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCCchHHHHHHHH-
Confidence 99999999999889999999999988888999999999999999999 5999999999999999999887799999998
Q ss_pred HcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhh
Q 016508 301 NKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRK 358 (388)
Q Consensus 301 ~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~ 358 (388)
+|++++++++.|.++|+++.++..++ ..++++++++++||+.++++
T Consensus 419 --------~~~~a~~lv~~a~~~g~~l~~~~~~~----~~l~~~el~~~ldp~~~v~~ 464 (472)
T PRK12273 419 --------GYENAAEIAKEALETGKSVRELVLER----GLLTEEELDDILSPENMTHP 464 (472)
T ss_pred --------HHHHHHHHHHHHHHhCCCHHHHHhhc----CCCCHHHHHHHcCHHHhCCC
Confidence 68888899999999999999998875 23568889999999998864
No 20
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=3.9e-75 Score=580.51 Aligned_cols=304 Identities=22% Similarity=0.272 Sum_probs=284.1
Q ss_pred CCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccc
Q 016508 6 REDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 85 (388)
Q Consensus 6 ~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A 85 (388)
.+|+ .++|+.|++++|+.++|||+|+|||||++|+++|++|+.+..+.+.|..++++|.++|++|++|+||||||+|||
T Consensus 64 ~~dv-~~~e~~L~~~~g~~~~~lH~G~S~nDi~~ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A 142 (387)
T cd01360 64 KHDV-IAFVTAIAEYCGEAGRYIHFGLTSSDVVDTALALQLREALDIILKDLKELLEVLKKKALEHKDTVMVGRTHGIHA 142 (387)
T ss_pred CCCh-HHHHHHHHHHHHHhhhheeCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeehhhcCCcc
Confidence 3555 799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCC-CCHHHHHHHhCCCCCCCCchhhhhchHHHHHHH
Q 016508 86 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLP-IDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFL 164 (388)
Q Consensus 86 ~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~-~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~~ 164 (388)
||||||||+++|+++|.||.+||.+++++++.+||||++++|++++ .+|+++++.|||..+..| +++++||++++++
T Consensus 143 ~P~TfG~~l~~~~~~L~r~~~rL~~~~~~~~~~~lgga~Gt~~~~~~~~~~~~a~~LG~~~~~~~--~~~~~rD~~~e~~ 220 (387)
T cd01360 143 EPTTFGLKFALWYAEFKRHLERLKEARERILVGKISGAVGTYANLGPEVEERVAEKLGLKPEPIS--TQVIQRDRHAEYL 220 (387)
T ss_pred eeehHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchHhhcCccCCHHHHHHHHHHcCCCCCCCC--CcccCcHHHHHHH
Confidence 9999999999999999999999999999999999998877777787 579999999999876433 4679999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccccc
Q 016508 165 SANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYN 243 (388)
Q Consensus 165 ~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~-~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~ 243 (388)
++++.++.+|+|||+|+++|+++|||||.+|. ++++||||||||+||+.+|+++++++.+.|...+ ..+++|++|+
T Consensus 221 ~~la~~~~~L~ria~Dl~~~s~~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a~~~~g~~~~---~~~~~~~~~~ 297 (387)
T cd01360 221 STLALIASTLEKIATEIRHLQRTEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLARVIRSNVIP---ALENVALWHE 297 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccceecCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HHhhhHHhcC
Confidence 99999999999999999999999999987653 4569999999999999999999999999999864 4568999999
Q ss_pred cccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHHHH
Q 016508 244 RDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGK 315 (388)
Q Consensus 244 rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v~~ 315 (388)
||++++ |..+++++..+..++..+..++++|+||+++|++++.. +++++|++++.|+++|+|||+||++|++
T Consensus 298 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~g~~~r~Ah~~V~~ 374 (387)
T cd01360 298 RDISHSSVERVILPDATILLDYILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVLLALVEKGMSREEAYEIVQR 374 (387)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999874 66899999999999999999999999999999999986 7888999999999999999999999998
No 21
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2.2e-74 Score=586.56 Aligned_cols=334 Identities=24% Similarity=0.281 Sum_probs=312.0
Q ss_pred hHHHHHHHHHHHhC-CCCCc--------cccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Q 016508 9 VHMNIEAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGY 79 (388)
Q Consensus 9 ~~~~~E~~l~~~~g-~~~~~--------lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~gr 79 (388)
+|..|++++.+++| +.|+| ||+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++|+||||
T Consensus 107 ~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~l~~l~~~L~~l~~~L~~~A~~~~~~im~Gr 186 (473)
T PRK13353 107 ANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNLLEGLLAAMGALQDVFEEKAAEFDHVIKMGR 186 (473)
T ss_pred hhHHHHHHHHHHhCccccCCccCCcccCccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc
Confidence 44558999999998 56775 9999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHH-------HHHHhCCC-CCCCCch
Q 016508 80 THLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFM-------TAEALEFT-APMRNSI 151 (388)
Q Consensus 80 Th~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~-------~a~~LG~~-~~~~n~~ 151 (388)
||+||||||||||||++|+++|.||++||.+++++++.+||||||+ ||++++||++ +|++|||. .+..|++
T Consensus 187 TH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~Av-GT~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~ 265 (473)
T PRK13353 187 TQLQDAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAV-GTGLNADPEYIERVVKHLAAITGLPLVGAEDLV 265 (473)
T ss_pred ccCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccc-cCCccCChhHHHHHHHHHHHHhCCCCccccchH
Confidence 9999999999999999999999999999999999999999999888 9999999864 67899998 5678999
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhH
Q 016508 152 DAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDL 228 (388)
Q Consensus 152 ~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~---e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~ 228 (388)
+++++||++++++++++.++.+|+|||+|+++|+|+ |||||.+|+ +++|||||||||||+.+|.++++|+++.|+.
T Consensus 266 ~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e~gev~lp~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~ 344 (473)
T PRK13353 266 DATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINLPA-VQPGSSIMPGKVNPVMPEVVNQIAFQVIGND 344 (473)
T ss_pred hhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCceEEECCC-CCCCCCCCCCCcCChHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999999976 899999987 9999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChH
Q 016508 229 VTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFR 307 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r 307 (388)
.+++.+.+++|++++++.+..+..+++++..+..++..+. .++++|+||+++|++++..++.+++++++.|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~vn~erm~~~l~~~~~l~t~La~~L-------- 416 (473)
T PRK13353 345 VTITLAAEAGQLELNVMEPVIAFNLLESISILTNACRAFTDNCVKGIEANEERCKEYVEKSVGIATALNPHI-------- 416 (473)
T ss_pred HHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcchHHHHHHHH--------
Confidence 9999899999999999877777889999999998888876 8999999999999999999987799999998
Q ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 308 TSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 308 ~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
||++|+++++.|.++|+++.++..++ ..++++++++++||+++++
T Consensus 417 -gh~~v~~~~~~a~~~g~~l~e~~~~~----~~~~~~el~~~ldp~~~v~ 461 (473)
T PRK13353 417 -GYEAAARIAKEAIATGRSVRELALEN----GLLSEEELDLILDPFRMTH 461 (473)
T ss_pred -HHHHHHHHHHHHHHhCCCHHHHHhhc----CCCCHHHHHHHcCHHHhcC
Confidence 69999999999999999999999876 2356888999999999885
No 22
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=7.4e-75 Score=578.28 Aligned_cols=305 Identities=25% Similarity=0.286 Sum_probs=285.8
Q ss_pred CCCCchHHHHHHHHHHHhCC-CCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccc
Q 016508 4 TDREDVHMNIEAALTDIIGE-PAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHL 82 (388)
Q Consensus 4 ~~~ed~~~~~E~~l~~~~g~-~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~ 82 (388)
+..+|+ .++|++|++++|+ .++|+|+|+||||+++|+++|++|+.+..+.+.+..++++|.++|++|++|+||||||+
T Consensus 59 ~~~~~v-~~~e~~L~~~~g~~~~~~vH~g~S~nDi~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~ 137 (381)
T cd01595 59 ETGHDV-IAFVYALAEKCGEDAGEYVHFGATSQDINDTALALQLRDALDIILPDLDALIDALAKLALEHKDTPMLGRTHG 137 (381)
T ss_pred HhCcCc-HHHHHHHHHHhhhHhhhHeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhhcCC
Confidence 346787 9999999999995 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCC----CCCHHHHHHHhCCCCCCCCchhhh-hch
Q 016508 83 QRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL----PIDRFMTAEALEFTAPMRNSIDAV-SDR 157 (388)
Q Consensus 83 Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~----~~~r~~~a~~LG~~~~~~n~~~a~-~~r 157 (388)
|||||||||||+++|+++|.||++||.+++++++.+|+||++++|+++ +.+++++|+.|||.. |.++|+ ++|
T Consensus 138 Q~A~P~T~G~~~~~~~~~L~r~~~rL~~~~~~~~~~~lGga~G~g~~~~~~~~~~~~~~a~~LGl~~---~~~~~~~~~r 214 (381)
T cd01595 138 QHALPTTFGKKFAVWAAELLRHLERLEEARERVLVGGISGAVGTHASLGPKGPEVEERVAEKLGLKV---PPITTQIEPR 214 (381)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhchhhhcccHhhhHhhcCCcHHHHHHHHHHHcCCCC---CCCCCCcccc
Confidence 999999999999999999999999999999999999999977777766 678999999999953 345664 499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHh
Q 016508 158 DFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCK 236 (388)
Q Consensus 158 d~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~-~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~ 236 (388)
|++++++++++.++.+|+|||+|+++|+|+|||||.+|+ ++++||||||||+||+.+|.++++++++.|...+++..+
T Consensus 215 d~~~e~~~~l~~~~~~l~ria~Dl~~~~s~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~- 293 (381)
T cd01595 215 DRIAELLSALALIAGTLEKIATDIRLLQRTEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL- 293 (381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 999999999999999999999999999999999999986 689999999999999999999999999999999887644
Q ss_pred cCccccccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHH
Q 016508 237 GLPLAYNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHD 311 (388)
Q Consensus 237 ~~~~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~ 311 (388)
|++|+||+++. |..+++++..+..++..+..++++|+||+++|++++.. ++++++.+++.|+++|+|||+||+
T Consensus 294 --~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~g~~~ae~~~~~L~~~g~g~~~Ah~ 371 (381)
T cd01595 294 --VQWHERDLSDSSVERNILPDAFLLLDAALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAKKGLGRQEAYE 371 (381)
T ss_pred --hHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccCHHHHHHHHHHHHHhCCCHhHHHH
Confidence 89999999765 58899999999999999999999999999999999988 568899999999999999999999
Q ss_pred HHHH
Q 016508 312 IVGK 315 (388)
Q Consensus 312 ~v~~ 315 (388)
+|++
T Consensus 372 ~v~~ 375 (381)
T cd01595 372 LVKE 375 (381)
T ss_pred HHHH
Confidence 9987
No 23
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=1.1e-73 Score=579.20 Aligned_cols=339 Identities=19% Similarity=0.251 Sum_probs=301.5
Q ss_pred CCCCchHHHH----HHHHHHHhC-CCCCc--------cccCCChHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 016508 4 TDREDVHMNI----EAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAI-DTIVRSIQRLQVALVKLAL 69 (388)
Q Consensus 4 ~~~ed~~~~~----E~~l~~~~g-~~~~~--------lH~g~SsnDi~~ta~~l~lr~~~-~~l~~~l~~l~~~L~~~A~ 69 (388)
+..||+|+++ |+++.+++| +.|++ ||+||||||+++|+++|++|+.+ ..+.+.|..|+++|.++|+
T Consensus 95 g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~l~~~L~~l~~~L~~~A~ 174 (464)
T PRK12425 95 GSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQLLPAIAELSGGLAEQSA 174 (464)
T ss_pred CCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3499999999 677778888 57877 99999999999999999999999 5999999999999999999
Q ss_pred HhcCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCH-------HHHHHHhC
Q 016508 70 KNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR-------FMTAEALE 142 (388)
Q Consensus 70 ~~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r-------~~~a~~LG 142 (388)
+|++|+||||||+||||||||||||++|+++|.||++||.+++++++.+|+||||+ ||++++++ +.+++.||
T Consensus 175 ~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAv-GT~~~~~~~~~~~~~~~La~~LG 253 (464)
T PRK12425 175 RHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAV-GTGLNAPHGFAEAIAAELAALSG 253 (464)
T ss_pred HhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchh-cCcccCCccHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999 99999975 23577789
Q ss_pred CCC-CCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c--ccccccCCCCCCCCCCCCCCCCccHHHHHH
Q 016508 143 FTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE-E--FGFITPSDSVSTGSSIMPQKKNPDPMELVR 218 (388)
Q Consensus 143 ~~~-~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~-e--~gev~~~~~~~~gSS~MP~K~NP~~~E~i~ 218 (388)
|.. +.+|.+|++++||++++++++++.++.+|+|||+|+++|+|+ + |||+.+|+. ++||||||||+||+.+|.++
T Consensus 254 ~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~-~~GSSiMPqK~NP~~~E~i~ 332 (464)
T PRK12425 254 LPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPAN-EPGSSIMPGKVNPTQCEALS 332 (464)
T ss_pred CCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCCC-CCCCCCCCCCcCCHHHHHHH
Confidence 987 478999999999999999999999999999999999999977 4 789999854 99999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHhcCccccccccccccchHHHHHHHHHH-HHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHH
Q 016508 219 GKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVG-MLEVSAEFAQNITFNVERIKKALPAGYLDATTLAD 297 (388)
Q Consensus 219 ~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~-~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~ 297 (388)
++|.++.|+..+++.+..+.++..|+|.......+++++..+.. ++..+..|+++|+||+++|++++..++++++.|++
T Consensus 333 ~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~erm~~~l~~~~~~at~L~~ 412 (464)
T PRK12425 333 MLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAEQMAAHLERGLMLVTALNP 412 (464)
T ss_pred HHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcccHHHHHhhh
Confidence 99999999999999988877766666655445568888888875 45556699999999999999999999876777733
Q ss_pred HHHHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 298 YLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 298 ~L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
++||++|| ++++.|.++|+++.++..+. ..++++++++++||+.++.
T Consensus 413 -----~ig~~~A~----~ia~~a~~~g~~l~e~~~~~----~~l~~~el~~~ldP~~~~~ 459 (464)
T PRK12425 413 -----HIGYDKAA----EIAKKAYAEGTTLREAALAL----GYLTDEQFDAWVRPENMLE 459 (464)
T ss_pred -----ccCHHHHH----HHHHHHHHhCCCHHHHHHhc----CCCCHHHHHHHcCHHHhcC
Confidence 47899999 55577788999999998763 2467889999999999773
No 24
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=3e-73 Score=575.42 Aligned_cols=330 Identities=25% Similarity=0.299 Sum_probs=305.0
Q ss_pred CchHHHHH----HHHHHHhC-CCCCc--------cccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016508 7 EDVHMNIE----AALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEG 73 (388)
Q Consensus 7 ed~~~~~E----~~l~~~~g-~~~~~--------lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~ 73 (388)
||+|+++| ..+++++| +.|+| ||+|+||||+++|+++|++|+.+..+.+.|..++++|.++|++|++
T Consensus 96 ~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~ 175 (450)
T cd01357 96 TSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILLLRKLLDALAALQEAFQAKAREFAD 175 (450)
T ss_pred chhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 58666655 66677789 66887 8999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHH-------HHHHhCCCC-
Q 016508 74 LIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFM-------TAEALEFTA- 145 (388)
Q Consensus 74 ~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~-------~a~~LG~~~- 145 (388)
|+||||||+|||||||||||+++|+++|.|+.+||.+++++++.+||||||+ ||++++++++ +|+.|||..
T Consensus 176 t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~Av-Gt~~~~~~~~~~~v~~~~a~~LGl~~~ 254 (450)
T cd01357 176 VLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAI-GTGINAPPGYIELVVEKLSEITGLPLK 254 (450)
T ss_pred CEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCce-eCCCCCChhHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999999999999999999999999888 9999999876 999999984
Q ss_pred CCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccCCCCCCCCCCCCCCCCccHHHHHHHHHH
Q 016508 146 PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSA 222 (388)
Q Consensus 146 ~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e---~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~ 222 (388)
+..|+++++++||++++++++++.++++|+|||+|+++|+|+| ||||.+| .+++|||||||||||+.+|.++++|+
T Consensus 255 ~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~p-~~~~GSSiMPqKrNP~~~E~ir~~a~ 333 (450)
T cd01357 255 RAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLP-AVQPGSSIMPGKVNPVIPEVVNQVAF 333 (450)
T ss_pred cCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceeEECC-CCCCcCCCCCCCcCcHHHHHHHHHHH
Confidence 5779999999999999999999999999999999999999766 9999998 58999999999999999999999999
Q ss_pred HHHhhHHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHHHH
Q 016508 223 RVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYLVN 301 (388)
Q Consensus 223 ~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~ 301 (388)
++.|...++..+.+++|++++++.+..+..+++++..+..+++.+. .++++|+||+++|++|+..++.+++++++.|
T Consensus 334 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~La~~l-- 411 (450)
T cd01357 334 QVIGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCREYVENSIGIVTALNPYI-- 411 (450)
T ss_pred HHhhHHHHHHHHHhcCcchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcchHHHHHHHH--
Confidence 9999999987778899999999887778889999999999999995 9999999999999999999887789999998
Q ss_pred cCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcC
Q 016508 302 KQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLG 351 (388)
Q Consensus 302 ~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ld 351 (388)
+|+.++++++.+.++|+++.++..++ ..++++++++++|
T Consensus 412 -------g~~~a~~~~~~a~~~g~~l~e~~~~~----~~l~~~el~~~~~ 450 (450)
T cd01357 412 -------GYEAAAEIAKEALETGRSVRELVLEE----GLLTEEELDEILS 450 (450)
T ss_pred -------HHHHHHHHHHHHHHhCCCHHHHHHhc----CCCCHHHHHHHhC
Confidence 58888889999999999999998765 2356778888775
No 25
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=4.7e-73 Score=575.99 Aligned_cols=351 Identities=24% Similarity=0.302 Sum_probs=315.0
Q ss_pred HHHHHHHHHHhC----CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccc
Q 016508 11 MNIEAALTDIIG----EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 86 (388)
Q Consensus 11 ~~~E~~l~~~~g----~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~ 86 (388)
..+.+.+.+.+| +.++|||+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++|+||||||+||||
T Consensus 81 ~~lv~~l~~~~~~~~~~~~~~vH~G~SsnDi~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~~~GrTH~Q~A~ 160 (452)
T PRK09053 81 IPLVKQLTAQVAARDAEAARYVHWGATSQDIIDTGLVLQLRDALDLLEPDLDRLCDALATLAARHRATPMVGRTWLQQAL 160 (452)
T ss_pred HHHHHHHHHHhcccCcchhccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeehhccCCcce
Confidence 345667888885 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCC-----CCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508 87 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG-----LPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL 161 (388)
Q Consensus 87 P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~-----~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~ 161 (388)
||||||||++|+++|.||++||.+++++++.+||||++++++. +++ ++++|+.|||..+. .+|+.+||+++
T Consensus 161 P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGgavGt~~~~~~~~~~v-~~~~a~~LGl~~~~---~~~~~~rD~~~ 236 (452)
T PRK09053 161 PVTLGLKFAGWLDALLRHRQRLAALRPRALVLQFGGAAGTLASLGEQALPV-AQALAAELQLALPA---LPWHTQRDRIA 236 (452)
T ss_pred echHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccchhhcccccccchHHH-HHHHHHHcCCCCCC---CCcccccHHHH
Confidence 9999999999999999999999999999999999986433222 334 57899999998764 34678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcc
Q 016508 162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240 (388)
Q Consensus 162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 240 (388)
+++++++.++++|+|||+|+++|+++|||||.+| +.+++||||||||+||+.+|.++++|+++.|+..+++ .+++.
T Consensus 237 e~~~~la~la~~L~kia~Di~ll~~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~~~~---~~~~~ 313 (452)
T PRK09053 237 EFASALGLLAGTLGKIARDVSLLMQTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLTAATRAPGLVATLF---AAMPQ 313 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhhccccCCCCCcCCCCCCCCchHHHHHHHHHHHHHHHHHHHH---HhChh
Confidence 9999999999999999999999999999999665 4788999999999999999999999999999998764 47899
Q ss_pred cccccc---ccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHHHH
Q 016508 241 AYNRDL---QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGK 315 (388)
Q Consensus 241 ~~~rd~---~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v~~ 315 (388)
+++||. +..|..+++++..+..++..+..++++|+||+++|++|+.. ++++++.++..|+.+ +++++||++|++
T Consensus 314 ~~erd~~~~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~erm~~~l~~s~~~~~ae~~~~~La~~-lgr~~Ah~iV~~ 392 (452)
T PRK09053 314 EHERALGGWHAEWDTLPELACLAAGALAQMAQIVEGLEVDAARMRANLDLTHGLILAEAVMLALADR-IGRLDAHHLVEQ 392 (452)
T ss_pred hhcccCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhcCCHHHHHHHHHHHHhc-cCHHHHHHHHHH
Confidence 999997 44578999999999999999999999999999999999964 578899999999876 999999999999
Q ss_pred HHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHH
Q 016508 316 AVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHS 376 (388)
Q Consensus 316 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~ 376 (388)
+++.+.++|+++.+++.++......++++++++++||+. |.|.++..+++.+.+
T Consensus 393 ~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~l~P~~-------~~g~~~~~~~~~~~~ 446 (452)
T PRK09053 393 ASKRAVAEGRHLRDVLAEDPQVSAHLSPAALDRLLDPAH-------YLGQAHAWVDRVLAE 446 (452)
T ss_pred HHHHHHHHCCCHHHHHHhChhhhccCCHHHHHHHcCHHH-------HhcchHHHHHHHHHH
Confidence 999999999999999987633223467889999999997 778899988888643
No 26
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=4.7e-73 Score=572.82 Aligned_cols=339 Identities=15% Similarity=0.141 Sum_probs=305.0
Q ss_pred HHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccccchh
Q 016508 11 MNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLL 90 (388)
Q Consensus 11 ~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~P~Tf 90 (388)
.++++.|++++|+.++|||+|+||||+++|++.|++|+++..+.+.|..++++|.++|++|++||||||||+|||+||||
T Consensus 73 ~a~~~~l~~~~~~~~~~vH~G~TS~Di~dta~~L~lr~a~~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~Tf 152 (436)
T cd03302 73 MAHVHAFGLLCPAAAGIIHLGATSCFVTDNTDLIQIRDALDLILPKLAAVIDRLAEFALEYKDLPTLGFTHYQPAQLTTV 152 (436)
T ss_pred hHHHHHHHHHhHhccCeeeeCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCccccchH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCCcc----ccCCCCCCCCH-------HHHHHHhCCCCCCCCchhhhhchHH
Q 016508 91 QHLLLAYVEQLERDAGRLQDCRVRMNFCPLGAC----ALAGTGLPIDR-------FMTAEALEFTAPMRNSIDAVSDRDF 159 (388)
Q Consensus 91 G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~----a~~Gt~~~~~r-------~~~a~~LG~~~~~~n~~~a~~~rd~ 159 (388)
||||++|+++|.|+++||.+++++++.+++||+ +..|+.++.|| +++|+.|||..+.++ ..++.+||+
T Consensus 153 G~~~a~~~~~L~r~~~RL~~~~~~~~~~~~~GavGt~a~~~~~~~~dr~~~~~v~~~~a~~LGl~~~~~~-~~~v~~rD~ 231 (436)
T cd03302 153 GKRACLWIQDLLMDLRNLERLRDDLRFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKVYPV-TGQTYSRKV 231 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcChhhhhHHHHhcCCchHHHHHHHHHHHHHHcCCCCCCCc-hhhhhccHH
Confidence 999999999999999999999999988777653 22244566776 689999999876433 347899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcC
Q 016508 160 VLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGL 238 (388)
Q Consensus 160 ~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~-~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~ 238 (388)
+++++++++.++.+|+|||+|+++|+| +||+.+|. .+++||||||||+||+.+|+++++|+.+.|+..+++. .+.
T Consensus 232 ~~e~~~~la~~a~~L~riA~Dl~l~~s--~~el~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~g~~~~~~~--~~~ 307 (436)
T cd03302 232 DIDVLNALSSLGATAHKIATDIRLLAN--LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARHLMNLASNAAQ--TAS 307 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--CceecccccCCCCCcccCCCccCcHHHHHHHHHHHHHHhhHHHHHH--Hhh
Confidence 999999999999999999999999999 99998763 5679999999999999999999999999999988764 345
Q ss_pred ccccccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHH
Q 016508 239 PLAYNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIV 313 (388)
Q Consensus 239 ~~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v 313 (388)
..++|||+..+ |..+++++..+..++..+..++++|+||+++|++|++. ++++++.+++.|+++|+|||+||++|
T Consensus 308 ~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~g~~~se~~~~~L~~~g~~~~~Ah~~v 387 (436)
T cd03302 308 TQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQELPFMATENIIMAAVKAGGDRQDAHERI 387 (436)
T ss_pred ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 67899998543 56689999999999999999999999999999999987 47778999999999999999999999
Q ss_pred HHHHHHHHHc------CCChHHhhHHhhhccCCCCHHHHHhhcCHHHHh
Q 016508 314 GKAVALCVSK------ECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAI 356 (388)
Q Consensus 314 ~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v 356 (388)
++++..+.++ |.+|.|++.++. .+.. ++++|++++||+.++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-~~~~l~~~~dp~~~~ 434 (436)
T cd03302 388 RVLSHQAAAVVKQEGGDNDLIERIKNDA-YFKP-IWDELDALLDPKTFI 434 (436)
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHhcCC-CcCC-CHHHHHHHhCHHhhh
Confidence 9999999999 999999998874 4545 788899999999754
No 27
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=5.4e-73 Score=576.05 Aligned_cols=336 Identities=22% Similarity=0.296 Sum_probs=296.8
Q ss_pred CCCchHHHH----HHHHHHHhC-C--------CCCccccCCChHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 016508 5 DREDVHMNI----EAALTDIIG-E--------PAKKLHTARSRNDQVLTDFRLWCRDAI-DTIVRSIQRLQVALVKLALK 70 (388)
Q Consensus 5 ~~ed~~~~~----E~~l~~~~g-~--------~~~~lH~g~SsnDi~~ta~~l~lr~~~-~~l~~~l~~l~~~L~~~A~~ 70 (388)
..+|+|+++ +.++.+..| + .++|||+|+|||||++|+++|++|+++ ..+.+.|..|+++|.++|++
T Consensus 98 ~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~SrnD~v~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~ 177 (464)
T PRK00485 98 SGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAIVERLLPALEHLRDTLAAKAEE 177 (464)
T ss_pred ccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568887777 665556557 5 677788999999999999999999999 79999999999999999999
Q ss_pred hcCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHH-------HHHHHhCC
Q 016508 71 NEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF-------MTAEALEF 143 (388)
Q Consensus 71 ~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~-------~~a~~LG~ 143 (388)
|++|+||||||+||||||||||||++|+++|.||++||.+++++++.+||||||+ ||++++||+ ++|+.|||
T Consensus 178 ~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~Av-GT~~~~~~~~~~~v~~~~A~~LGl 256 (464)
T PRK00485 178 FADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAV-GTGLNAHPGFAERVAEELAELTGL 256 (464)
T ss_pred cCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc-cCCccCChhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999998886 999999987 49999999
Q ss_pred C-CCCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccccccCCCCCCCCCCCCCCCCccHHHHHHH
Q 016508 144 T-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMPQKKNPDPMELVRG 219 (388)
Q Consensus 144 ~-~~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~---e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~ 219 (388)
. .+..|.+|++++||++++++++++.++.+|+|||+|+++|+|+ |||||.+|+. ++|||||||||||+.+|.+++
T Consensus 257 ~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~lp~~-~~GSSiMPqKrNP~~~E~ir~ 335 (464)
T PRK00485 257 PFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISLPEN-EPGSSIMPGKVNPTQCEALTM 335 (464)
T ss_pred CCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEcCCC-CCCCCCCCCCCCcHHHHHHHH
Confidence 9 7888999999999999999999999999999999999999965 6999999875 699999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHhcCcccccccccc--ccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHH
Q 016508 220 KSARVIGDLVTLLTLCKGLPLAYNRDLQE--DKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLA 296 (388)
Q Consensus 220 ~a~~~~g~~~~~~~~~~~~~~~~~rd~~~--~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la 296 (388)
+|+++.|...+++....+. +++||... ....+++.+..+..++..+. .++++|+||+++|++|+..++.++++++
T Consensus 336 ~a~~v~g~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~v~~erm~~~l~~~~~~~t~La 413 (464)
T PRK00485 336 VCAQVMGNDAAVTFAGSQG--NFELNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRERIKELLERSLMLVTALN 413 (464)
T ss_pred HHHHHhhhHHHHHHHhccC--cccccccChHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCCeeHHHhc
Confidence 9999999999888555444 56676533 22346777777777777766 9999999999999999998876677777
Q ss_pred HHHHHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 297 DYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 297 ~~L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
+ ++||++||+ +++.+.++|.++.++..+. ..++++++++++||++++.
T Consensus 414 ~-----~lg~~~A~~----~~~~a~~~g~~l~~~~~~~----~~l~~~~l~~~ldP~~~~~ 461 (464)
T PRK00485 414 P-----HIGYDKAAK----IAKKAHKEGLTLKEAALEL----GYLTEEEFDRWVDPEKMTG 461 (464)
T ss_pred c-----ccCHHHHHH----HHHHHHHcCCCHHHHHHHc----CCCCHHHHHHHcCHHHhcC
Confidence 6 489999987 7778888999999988762 2467888999999998654
No 28
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=5.4e-72 Score=566.46 Aligned_cols=338 Identities=21% Similarity=0.254 Sum_probs=297.8
Q ss_pred CCchHHHHHHHHHHHhC-CCCCc--cc------cCCChHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCcc
Q 016508 6 REDVHMNIEAALTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWCRDA-IDTIVRSIQRLQVALVKLALKNEGLI 75 (388)
Q Consensus 6 ~ed~~~~~E~~l~~~~g-~~~~~--lH------~g~SsnDi~~ta~~l~lr~~-~~~l~~~l~~l~~~L~~~A~~~~~~~ 75 (388)
.+|||..||+++.+++| +.|+| || +|+||||+++|+++|++|+. +..+.+.|..|+++|.++|++|++|+
T Consensus 95 ~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~~l~~~l~~l~~~L~~~A~~~~~t~ 174 (458)
T PLN00134 95 NMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHSRLIPALKELHESLRAKSFEFKDIV 174 (458)
T ss_pred cCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 78999999999999999 68888 88 99999999999999999955 77999999999999999999999999
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHH-------HHHHhCCCCC-C
Q 016508 76 VPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFM-------TAEALEFTAP-M 147 (388)
Q Consensus 76 ~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~-------~a~~LG~~~~-~ 147 (388)
||||||+||||||||||||++|+++|.||++||.+++++++.+||||+|+ ||++++||++ +|+.|||..+ .
T Consensus 175 m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av-GT~~~~~~~~~~~v~~~la~~LGl~~~~~ 253 (458)
T PLN00134 175 KIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAV-GTGLNTKKGFDEKIAAAVAEETGLPFVTA 253 (458)
T ss_pred cccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee-cCCccCChhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999998888 9999999874 9999999864 6
Q ss_pred CCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Q 016508 148 RNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARV 224 (388)
Q Consensus 148 ~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~---e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~ 224 (388)
.|.++++.+||++++++++++.++++|+|||+|+++|+|+ |||||.+|+ .++||||||||+||+.+|.++++|+++
T Consensus 254 ~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~lp~-~~~GSSiMP~KrNPv~~E~i~~~a~~v 332 (458)
T PLN00134 254 PNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNLPE-NEPGSSIMPGKVNPTQCEALTMVCAQV 332 (458)
T ss_pred ccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEECCC-CCCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999965 899999986 489999999999999999999999999
Q ss_pred HhhHHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHH-HHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcC
Q 016508 225 IGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVS-AEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQ 303 (388)
Q Consensus 225 ~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~g 303 (388)
.|...+++....+.++.+|.+.......+++.+..+..++..+ ..|+++|+||+++|++|+..++.+.+.+++ +
T Consensus 333 ~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~l~vn~erm~~~l~~~~~l~~~La~-----~ 407 (458)
T PLN00134 333 MGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDASASFRKNCVRGIEANRERISKLLHESLMLVTALNP-----K 407 (458)
T ss_pred HhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccchHHHhhh-----c
Confidence 9999998866665555544321000124566666666666666 699999999999999999998766777776 4
Q ss_pred CChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhh
Q 016508 304 VPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRK 358 (388)
Q Consensus 304 i~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~ 358 (388)
+||++||+ +++++.++|+++.++..+. ..++++++++++||+.++..
T Consensus 408 ig~~~A~~----~~~~a~~~g~~l~e~~~~~----~~l~~~el~~~ldP~~~~~~ 454 (458)
T PLN00134 408 IGYDKAAA----VAKKAHKEGTTLKEAALKL----GVLTAEEFDELVVPEKMTGP 454 (458)
T ss_pred cCHHHHHH----HHHHHHHhCCCHHHHHHhc----CCCCHHHHHHHcCHHHhcCC
Confidence 78999987 7778888999999998762 24678899999999987654
No 29
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.6e-71 Score=546.89 Aligned_cols=350 Identities=25% Similarity=0.316 Sum_probs=317.2
Q ss_pred HHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccccch
Q 016508 11 MNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVL 89 (388)
Q Consensus 11 ~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~P~T 89 (388)
.++++.+.+.+| +.++|||+|+|||||+||++.|++|++++.|.+.|..+++.|.++|.+|++|||+||||+|||+|||
T Consensus 74 ~a~v~~l~e~~~~~~~~~VH~GaTS~DI~Dta~~L~lk~a~~ii~~~l~~l~~~L~~~A~~~k~t~m~GRTHgq~A~PtT 153 (438)
T COG0015 74 KALVRALAEKVGEEASEYVHFGATSQDIIDTALALQLKEALDLILPDLKRLIEALAELALEHKDTPMLGRTHGQPAEPTT 153 (438)
T ss_pred HHHHHHHHHhcCcccccceecccchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeecccccCCCCccch
Confidence 578999999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCC------CHHHHHHHhCCCCCCCCchhhhhchHHHHHH
Q 016508 90 LQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI------DRFMTAEALEFTAPMRNSIDAVSDRDFVLEF 163 (388)
Q Consensus 90 fG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~------~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~ 163 (388)
||++++.|+++|.|+++||.++.+++..+.+||+ + ||...+ -++++++.|||..+. ..+|+.+||+++++
T Consensus 154 ~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~Ga-~-Gt~Aa~~~~~~~ve~~v~e~LGL~~~p--~stq~~~RD~~ae~ 229 (438)
T COG0015 154 FGKKFANWLAELLRHLERLEEAEERIIVGKIGGA-V-GTLAALGDLGAEVEERVAEKLGLKPAP--ISTQVSPRDRIAEF 229 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc-h-hhHhhcCchhHHHHHHHHHHcCCCCCC--CCcccccchHHHHH
Confidence 9999999999999999999999999999999864 4 553322 267899999998442 12499999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcccc
Q 016508 164 LSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAY 242 (388)
Q Consensus 164 ~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~ 242 (388)
+++|++++++|.||+.|+++|+++|++||++| .++++|||+||||+||+.+|++.++++.+.++....+ +++++|+
T Consensus 230 ~~~La~i~~sl~k~a~dIr~l~~~e~~Ev~E~f~~gq~GSSaMPHKrNPi~~E~~~glar~~r~~~~~~~---e~~~~wh 306 (438)
T COG0015 230 FSALALLAGSLEKFARDIRLLQRTEVGEVEEPFAKGQVGSSAMPHKRNPIDSENVTGLARVARALVSTLL---ENLVLWH 306 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHHHHHHH---HHhHHHH
Confidence 99999999999999999999999999999875 6889999999999999999999999999999987544 5779999
Q ss_pred ccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 016508 243 NRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGKAV 317 (388)
Q Consensus 243 ~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~ 317 (388)
|||+.++ |..||++|..+..+|..+..++++|+||+++|.+|++. +++.++.++..|+++|+|+++||++|.+.+
T Consensus 307 ERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~~gli~se~v~~~l~~~g~~Re~a~elvr~~a 386 (438)
T COG0015 307 ERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLTLGLIASERVMLALRKKGMGREEAHELVREKA 386 (438)
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhccchhhhHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 9999765 55799999999999999999999999999999999986 578899999999999999999999999999
Q ss_pred HHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHH
Q 016508 318 ALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 374 (388)
Q Consensus 318 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~ 374 (388)
+.+.++++++.++...+......++++++.++|||.. |.|.+.+.+++.+
T Consensus 387 ~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~dp~~-------y~G~a~~i~~r~~ 436 (438)
T COG0015 387 MKAWEQGKEFLELLLADERVTKYLSEEELLELLDPAN-------YLGRADEIVERVV 436 (438)
T ss_pred HHHHHhccchHHHhccchhhhccCcHHHHHHcCCHHH-------HhhHHHHHHHHHh
Confidence 9999999999777776654555678899999999997 7788877666543
No 30
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=4.9e-71 Score=559.49 Aligned_cols=334 Identities=21% Similarity=0.251 Sum_probs=294.7
Q ss_pred chHHHHHHHHHHHhC-CCC--Cccc------cCCChHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccc
Q 016508 8 DVHMNIEAALTDIIG-EPA--KKLH------TARSRNDQVLTDFRLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVP 77 (388)
Q Consensus 8 d~~~~~E~~l~~~~g-~~~--~~lH------~g~SsnDi~~ta~~l~lr~~~-~~l~~~l~~l~~~L~~~A~~~~~~~~~ 77 (388)
|+|..|+.++.+++| +.| +|+| +|+||||+++|+++|++|+.+ ..+.+.|..|+++|.++|++|++|+||
T Consensus 102 ~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~dt~m~ 181 (458)
T TIGR00979 102 NVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQLIPALENLKKTLDAKSKEFAHIVKI 181 (458)
T ss_pred cHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeee
Confidence 567777779999998 664 4599 799999999999999999999 599999999999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHH-------HHHHHhCCCC-CCCC
Q 016508 78 GYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF-------MTAEALEFTA-PMRN 149 (388)
Q Consensus 78 grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~-------~~a~~LG~~~-~~~n 149 (388)
||||+||||||||||||++|+++|.||++||.+++++++.+||||+|+ ||+++++|+ ++++.|||.. +..|
T Consensus 182 GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av-GT~~~~~~~~~~~v~~~~a~~LGl~~~~~~n 260 (458)
T TIGR00979 182 GRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAV-GTGLNTHPGFDEKVAEEIAKETGLPFVTAPN 260 (458)
T ss_pred cccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChh-cCCccCChhHHHHHHHHHHHHhCCCCeecCc
Confidence 999999999999999999999999999999999999999999999888 999999987 5999999986 6788
Q ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh
Q 016508 150 SIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIG 226 (388)
Q Consensus 150 ~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~---e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g 226 (388)
+++++.+||++++++++++.++.+|+|||+|+++|+|+ |||||.+|+ +++||||||||+||+.+|.++++|+++.|
T Consensus 261 ~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~gev~~p~-~~~GSSiMP~K~NP~~~E~i~~~a~~v~g 339 (458)
T TIGR00979 261 KFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFIPE-NEPGSSIMPGKVNPTQCEALTMVCVQVMG 339 (458)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeEECCC-CCCCCCCCCCCcCCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999965 799999987 79999999999999999999999999999
Q ss_pred hHHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCC
Q 016508 227 DLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVP 305 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~ 305 (388)
...+++.+..+.++.++.+.......++..+..+..++..+. .|+++|+||+++|++|+..++.+++.|++ ++|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~erm~~nl~~~~~~~t~La~-----~lg 414 (458)
T TIGR00979 340 NDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAMESFRDHCVVGIEPNKERIQQLLNNSLMLVTALNP-----HIG 414 (458)
T ss_pred hHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCccHHHHhhh-----ccC
Confidence 999999888776665554321111225666666777776765 79999999999999999998766777776 489
Q ss_pred hHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHh
Q 016508 306 FRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAI 356 (388)
Q Consensus 306 ~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v 356 (388)
|++||+ +++++.++|.++.+++.+. ..++++++++++||+.++
T Consensus 415 ~~~A~~----~~~~a~~~~~~~~e~~~~~----~~l~~~el~~~ldp~~~~ 457 (458)
T TIGR00979 415 YDNAAK----IAKKAHKEGITLKEAALEL----GLLSEEEFDEWVVPEQMV 457 (458)
T ss_pred HHHHHH----HHHHHHHhCCCHHHHHHHc----CCCCHHHHHHHcCHHHhc
Confidence 999987 7777888999999998762 245688899999999754
No 31
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=4.6e-71 Score=560.27 Aligned_cols=340 Identities=21% Similarity=0.251 Sum_probs=301.1
Q ss_pred CCCCC--Cc------hHHHHHHHHHHHhC-CCCCc--------cccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016508 2 WRTDR--ED------VHMNIEAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVAL 64 (388)
Q Consensus 2 ~~~~~--ed------~~~~~E~~l~~~~g-~~~~~--------lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L 64 (388)
++|.. +| +|+.||+++.+++| +.|+| ||+||||||+++|+++|++|+.+..+.+.|..|+++|
T Consensus 98 ~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~~l~~l~~~L~~L~~~L 177 (479)
T PRK14515 98 VDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLNALEGLLQTMGYMHDVF 177 (479)
T ss_pred CCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555 66 77889999999999 55884 5599999999999999999999999999999999999
Q ss_pred HHHHHHhcCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHH----
Q 016508 65 VKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEA---- 140 (388)
Q Consensus 65 ~~~A~~~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~---- 140 (388)
.++|++|++|+||||||+|||||+||||||++|+++|.||++||.+++++++.+||||||+ ||++++||++.++.
T Consensus 178 ~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAv-GT~~~~~~~~~~~~l~~l 256 (479)
T PRK14515 178 ELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAV-GTGLNADPEYIEAVVKHL 256 (479)
T ss_pred HHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccc-cCCCCCChhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 99999998765554
Q ss_pred ---hCCC-CCCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc--ccccCCCCCCCCCCCCCCCCccH
Q 016508 141 ---LEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE-FG--FITPSDSVSTGSSIMPQKKNPDP 213 (388)
Q Consensus 141 ---LG~~-~~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e-~g--ev~~~~~~~~gSS~MP~K~NP~~ 213 (388)
+|+. .+..|+++++++||++++++++++.++.+|+|||+|+++|+|+| +| |+.+|+ .++||||||||+||+.
T Consensus 257 a~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~-~~~GSSiMP~KrNP~~ 335 (479)
T PRK14515 257 AAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPA-RQPGSSIMPGKVNPVM 335 (479)
T ss_pred HHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCC-CCCCcCCCCcccCchH
Confidence 5554 23458899999999999999999999999999999999999875 55 566887 6999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCcccccccccc-ccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhH
Q 016508 214 MELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQE-DKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLD 291 (388)
Q Consensus 214 ~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~-~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~ 291 (388)
+|.++++|.++.|+..+++++..+.+++++. ++. ....+++++..+..+++.+. .|+++|+||++||++++..++.+
T Consensus 336 ~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~-~~p~i~~~l~~si~~l~~al~~~~~~~l~gl~vn~erm~~~l~~s~~l 414 (479)
T PRK14515 336 PEVINQIAFQVIGNDHTICLASEAGQLELNV-MEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANEDRLKEYVEKSVGI 414 (479)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhcccHHHHH-hcchhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCccH
Confidence 9999999999999999999888777776654 221 13368889999999997766 59999999999999999998877
Q ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 292 ATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 292 a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
++.|++.+ +|+.+++++++|.++|+++.|+..++ ..++++++++++||++++.
T Consensus 415 ~t~La~~i---------G~~~v~~~a~~A~~~g~~l~e~~~~~----~~l~~~el~~~ldP~~~~~ 467 (479)
T PRK14515 415 ITAVNPHI---------GYEAAARVAKEAIATGQSVRELCVKN----GVLSQEDLELILDPFEMTH 467 (479)
T ss_pred HHHhcchh---------cHHHHHHHHHHHHHhCCCHHHHHHhc----CCCCHHHHHHhCCHHHcCC
Confidence 89998855 38889999999999999999997654 2467889999999999885
No 32
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=7.2e-71 Score=558.56 Aligned_cols=335 Identities=24% Similarity=0.286 Sum_probs=300.5
Q ss_pred CchHHH----HHHHHHHHhC-CCCCcccc--------CCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 016508 7 EDVHMN----IEAALTDIIG-EPAKKLHT--------ARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEG 73 (388)
Q Consensus 7 ed~~~~----~E~~l~~~~g-~~~~~lH~--------g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~ 73 (388)
||+|++ +|..|.+++| +.|+|+|+ |+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|++
T Consensus 99 ~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~ 178 (468)
T TIGR00839 99 TSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQSTNDAYPTGFRIAVYSSLIKLVDAINQLRDGFEQKAKEFAD 178 (468)
T ss_pred cccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 445555 5999999999 78999995 9999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHH-------HHHhCCCCC
Q 016508 74 LIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMT-------AEALEFTAP 146 (388)
Q Consensus 74 ~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~-------a~~LG~~~~ 146 (388)
|+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||+|+ ||++++|+++. |+.|||+.+
T Consensus 179 t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av-GT~~~~~~~~~~~v~~~~a~~LGl~~~ 257 (468)
T TIGR00839 179 ILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAI-GTGLNTPPEYSPLVVKKLAEVTGLPCV 257 (468)
T ss_pred CeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcce-eCCCcCChhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999999999999999999999888 99999997655 999999965
Q ss_pred -CCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccCCCCCCCCCCCCCCCCccHHHHHHHHHH
Q 016508 147 -MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSA 222 (388)
Q Consensus 147 -~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e---~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~ 222 (388)
..|+++++.+||++++++++++.++.+|+|||+|+++|+|+| +|||.+| .+++||||||||+||+.+|.++++|+
T Consensus 258 ~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~~-~~~~gSS~MPqKrNP~~~E~ir~~a~ 336 (468)
T TIGR00839 258 PAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLP-ELQAGSSIMPAKVNPVVPEVVNQVCF 336 (468)
T ss_pred CCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeCC-CCCCCCCCCCCCcCcHHHHHHHHHHH
Confidence 579999999999999999999999999999999999999765 7889998 68999999999999999999999999
Q ss_pred HHHhhHHHHHHHHhcCcccccccccc-ccchHHHHHHHHHHHHHH-HHHhhhcceeCHHHHHHhcccChhHHHHHHHHHH
Q 016508 223 RVIGDLVTLLTLCKGLPLAYNRDLQE-DKEPTFDSVKTIVGMLEV-SAEFAQNITFNVERIKKALPAGYLDATTLADYLV 300 (388)
Q Consensus 223 ~~~g~~~~~~~~~~~~~~~~~rd~~~-~~~~l~~~~~~~~~~l~~-~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~ 300 (388)
++.|...+++.+.++.+++++. .+. ....+++++..+..++.. +..++++|+||+++|++|+..+..+++.++
T Consensus 337 ~~~g~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~vn~erm~~~l~~~~~~~~~La---- 411 (468)
T TIGR00839 337 KVIGNDTTVTLAAEAGQLQLNV-MEPVIGQAMFESIHILTNACYNLTDKCVNGITANKEICEGYVFNSIGIVTYLN---- 411 (468)
T ss_pred HHHhHHHHHHHHHhcCChHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhHHHHHHHh----
Confidence 9999999997777888887554 222 245688888888888875 889999999999999999997665565554
Q ss_pred HcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 301 NKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 301 ~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
|| .||+.++++++.+.++|+++.++..++ ..+++++++.++||+++++
T Consensus 412 ----~~-~g~~~a~~~~~~a~~~g~~l~e~~~~~----~~l~~~~l~~~ldP~~~v~ 459 (468)
T TIGR00839 412 ----PF-IGHHNGDIVGKICAETGKSVREVVLEK----GLLTEEELDDIFSVENLMH 459 (468)
T ss_pred ----hH-hhHHHHHHHHHHHHHhCCCHHHHHHhc----CCCCHHHHHHHcCHHHHcC
Confidence 45 389999999999999999999998765 2467888999999998774
No 33
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=9.2e-71 Score=557.55 Aligned_cols=335 Identities=21% Similarity=0.272 Sum_probs=295.8
Q ss_pred CCCchHHHH----HHHHHHHhC---------CCCCccccCCChHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 016508 5 DREDVHMNI----EAALTDIIG---------EPAKKLHTARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALK 70 (388)
Q Consensus 5 ~~ed~~~~~----E~~l~~~~g---------~~~~~lH~g~SsnDi~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~ 70 (388)
..+|+|+.+ +.++++..| +.++|||+|+||||+++|+++|++|+++. .+.+.+..|+++|..+|++
T Consensus 94 ~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~ 173 (455)
T cd01362 94 SGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLLPALKHLIDALDAKADE 173 (455)
T ss_pred ccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566766664 444447667 34667999999999999999999999996 5999999999999999999
Q ss_pred hcCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHH-------HHHHHhCC
Q 016508 71 NEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF-------MTAEALEF 143 (388)
Q Consensus 71 ~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~-------~~a~~LG~ 143 (388)
|++|+||||||+||||||||||||++|+++|.|+++||.+++++++.+||||||+ ||+++++|+ ++|+.|||
T Consensus 174 ~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~-Gt~~~~~~~~~~~v~~~~a~~LGl 252 (455)
T cd01362 174 FKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAV-GTGLNAHPGFAEKVAAELAELTGL 252 (455)
T ss_pred ccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeec-cCCccCChhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999998787 999999975 78999999
Q ss_pred C-CCCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccccccCCCCCCCCCCCCCCCCccHHHHHHH
Q 016508 144 T-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMPQKKNPDPMELVRG 219 (388)
Q Consensus 144 ~-~~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~---e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~ 219 (388)
. .+..|.+|++.+||++++++++++.++.+|+|||+|+++|+|+ |||||.+|+ .++||||||||+||+.+|++++
T Consensus 253 ~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~~~-~~~GSS~MPqKrNP~~~E~ir~ 331 (455)
T cd01362 253 PFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPE-NEPGSSIMPGKVNPTQCEALTM 331 (455)
T ss_pred CCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCceEECCC-CCCCCCCCCCCCCcHHHHHHHH
Confidence 8 5778899999999999999999999999999999999999965 799999987 7999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHH-HHhhhcceeCHHHHHHhcccChhHHHHHHHH
Q 016508 220 KSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVS-AEFAQNITFNVERIKKALPAGYLDATTLADY 298 (388)
Q Consensus 220 ~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~-~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~ 298 (388)
+++++.|...+++.+..+.++.++.|.+.....++..+..+..++..+ ..++++|+||+++|++|+..++.+++++++
T Consensus 332 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~~rm~~~l~~~~~~~~~La~- 410 (455)
T cd01362 332 VAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAELLERSLMLVTALNP- 410 (455)
T ss_pred HHHHHhhhHHHHHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcchhHHHhcc-
Confidence 999999999999988888888887776555455666666666666665 699999999999999999998766777775
Q ss_pred HHHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHH
Q 016508 299 LVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVEN 354 (388)
Q Consensus 299 L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~ 354 (388)
|+||++||++ ++.+.++|.++.++..++ ..+++++++.++||++
T Consensus 411 ----~ig~~~A~~l----~~~a~~~~~~l~~~~~~~----~~~~~~el~~~~dp~~ 454 (455)
T cd01362 411 ----HIGYDKAAKI----AKKAHKEGLTLKEAALEL----GYLTEEEFDRLVDPEK 454 (455)
T ss_pred ----ccCHHHHHHH----HHHHHHcCCCHHHHHHhc----CCCCHHHHHHhcCccc
Confidence 6999999877 667788999999998765 2456788999999985
No 34
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=1.7e-70 Score=536.73 Aligned_cols=276 Identities=41% Similarity=0.547 Sum_probs=267.9
Q ss_pred CCCCCCchHHHHHHHHHHHhCCC-CCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Q 016508 2 WRTDREDVHMNIEAALTDIIGEP-AKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYT 80 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g~~-~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grT 80 (388)
++++.||.|+++|++|++++|+. ++|+|+|+||||+++|+++|++|+.+..+.+.|.+++++|.++|++|++|+|||||
T Consensus 47 ~~~~~~~~~~~~e~~l~~~~g~~~~~~lH~G~S~nDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grT 126 (325)
T cd01334 47 QEGSGTHDVMAVEEVLAERAGELNGGYVHTGRSSNDIVDTALRLALRDALDILLPALKALIDALAAKAEEHKDTVMPGRT 126 (325)
T ss_pred eCCCCccHHHHHHHHHHHHhccccCCCCccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeeccc
Confidence 46889999999999999999954 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCC--CCCHHHHHHHhCCCCCCCCchhhhhchH
Q 016508 81 HLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL--PIDRFMTAEALEFTAPMRNSIDAVSDRD 158 (388)
Q Consensus 81 h~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~--~~~r~~~a~~LG~~~~~~n~~~a~~~rd 158 (388)
|+|||||||||||+++|+++|.|+++||.+++++++.+|||+||++|+.+ +++|+++|+.|||..+.+|+++++++||
T Consensus 127 H~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lG~gA~g~~~~~~~~~~~~~a~~LG~~~~~~~~~~a~~~rd 206 (325)
T cd01334 127 HLQDAQPTTLGHELAAWAAELERDLERLEEALKRLNVLPLGGGAVGTGANAPPIDRERVAELLGFFGPAPNSTQAVSDRD 206 (325)
T ss_pred ccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcHhHHhCcCCCCcchHHHHHHHhcCcCcCcCHHHHHhCcH
Confidence 99999999999999999999999999999999999999999889878888 9999999999999778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcC
Q 016508 159 FVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGL 238 (388)
Q Consensus 159 ~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~ 238 (388)
++++++++++.++.+|+|||+|+++|+++|+||+.+|+.+++|||||||||||+.+|+++++++++.|...++..+..+.
T Consensus 207 ~~~e~~~~l~~~~~~l~ria~Dl~~~~~~e~gev~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~ 286 (325)
T cd01334 207 FLVELLSALALLAVSLSKIANDLRLLSSGEFGEVELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGG 286 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998779999999999999999999999999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHHHHHHHHHHhhhcceeC
Q 016508 239 PLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFN 277 (388)
Q Consensus 239 ~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn 277 (388)
+.++++|.+..|..+++++..+..+++.+..++++|+||
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~l~v~ 325 (325)
T cd01334 287 PLEDNVDSPVEREALPDSFDLLDAALRLLTGVLEGLEVN 325 (325)
T ss_pred chhhhcccHHHHHHHHHHHHHHHHHHHHHHHHhCcCEeC
Confidence 999999999999999999999999999999999999997
No 35
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=7.9e-69 Score=542.30 Aligned_cols=332 Identities=23% Similarity=0.258 Sum_probs=292.2
Q ss_pred CCCchHHHHHH----HHHHHhC-CCCCc--------cccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016508 5 DREDVHMNIEA----ALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKN 71 (388)
Q Consensus 5 ~~ed~~~~~E~----~l~~~~g-~~~~~--------lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~ 71 (388)
..+|+|+.+|. ++.+++| ..|+| +|+|+||||+++|+++|++|+.+..+.+.|..|+++|.++|++|
T Consensus 94 ~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~h~~~~v~h~g~SrnD~v~t~~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~ 173 (450)
T cd01596 94 SGTSTNMNVNEVIANRALELLGGKKGKYPVHPNDDVNNSQSSNDDFPPAAHIAAALALLERLLPALEQLQDALDAKAEEF 173 (450)
T ss_pred CcccccchHHHHHHHHHHHHhccccCCcccCCCcccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47788887776 5556778 56777 66999999999999999999999999999999999999999999
Q ss_pred cCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHH-------HHHHhCCC
Q 016508 72 EGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFM-------TAEALEFT 144 (388)
Q Consensus 72 ~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~-------~a~~LG~~ 144 (388)
++|+||||||+|+|||||||||+++|+++|.||.+||..++++++.+||||||+ ||++++|+++ +|+.|||.
T Consensus 174 ~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~-Gt~~~~~~~~~~~v~~~~a~~LGl~ 252 (450)
T cd01596 174 ADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAV-GTGLNAPPGYAEKVAAELAELTGLP 252 (450)
T ss_pred cCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcce-eCCCCCChhHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999888 9999999765 79999998
Q ss_pred -CCCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccccccCCCCCCCCCCCCCCCCccHHHHHHHH
Q 016508 145 -APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITPSDSVSTGSSIMPQKKNPDPMELVRGK 220 (388)
Q Consensus 145 -~~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~---e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~ 220 (388)
.+..|.++|+++||++++++++++.++.+|+|||+|+++|+|+ |||||.+|+ +++|||+|||||||+.+|.++++
T Consensus 253 ~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~~-~~~GSS~MPqKrNP~~~E~ir~~ 331 (450)
T cd01596 253 FVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLPA-NQPGSSIMPGKVNPVIPEAVNMV 331 (450)
T ss_pred CccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECCC-CCCCCCCCCCCCCCHHHHHHHHH
Confidence 4778999999999999999999999999999999999999965 699999987 89999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHH
Q 016508 221 SARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYL 299 (388)
Q Consensus 221 a~~~~g~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L 299 (388)
++++.|...+++....+.+++.+.+......++++.+..+..++..+. .++++|+||+++|++|+..++.+++++++.|
T Consensus 332 a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~~l~~~~~~~t~LA~~l 411 (450)
T cd01596 332 AAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEERCKEYVENSLMLVTALNPHI 411 (450)
T ss_pred HHHHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcchHHHHhHHH
Confidence 999999999988666666666543332212346777777777777766 9999999999999999999877789999998
Q ss_pred HHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcC
Q 016508 300 VNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLG 351 (388)
Q Consensus 300 ~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ld 351 (388)
+|+.++++++.+.++|+++.++..++ ..++++++++++|
T Consensus 412 ---------g~~~a~~~v~~a~~~g~~l~~~~~~~----~~~~~~~l~~~~d 450 (450)
T cd01596 412 ---------GYEKAAEIAKEALKEGRTLREAALEL----GLLTEEELDEILD 450 (450)
T ss_pred ---------hHHHHHHHHHHHHHcCCCHHHHHHHh----CCCCHHHHHHHhC
Confidence 56666678888889999999998765 2345677877765
No 36
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=3.1e-66 Score=523.74 Aligned_cols=338 Identities=19% Similarity=0.187 Sum_probs=288.5
Q ss_pred CCch--H--HHHHHHHHHHhC------CCCCccccCCChHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCc
Q 016508 6 REDV--H--MNIEAALTDIIG------EPAKKLHTARSRNDQVLTDFRLWCRDAIDT-IVRSIQRLQVALVKLALKNEGL 74 (388)
Q Consensus 6 ~ed~--~--~~~E~~l~~~~g------~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~-l~~~l~~l~~~L~~~A~~~~~~ 74 (388)
.|+. | .++|+.|.+++| +.++|||+|+|||||++|+++|++|+.+.. +.+.|..++++|.++|++|++|
T Consensus 85 ~e~~~~hdv~a~~~~l~~~~~~~~~~~~~~~~vH~G~Ts~Di~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~~t 164 (456)
T PRK09285 85 IERTTNHDVKAVEYFLKEKLAGLPELEAVSEFIHFACTSEDINNLSHALMLKEAREEVLLPALRELIDALKELAHEYADV 164 (456)
T ss_pred HHHHhCCChHHHHHHHHHHhcccCcchhHHhHccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3455 7 899999999997 468999999999999999999999999998 9999999999999999999999
Q ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCC---C---C------CCHHHHHHHhC
Q 016508 75 IVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG---L---P------IDRFMTAEALE 142 (388)
Q Consensus 75 ~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~---~---~------~~r~~~a~~LG 142 (388)
+||||||+|||+||||||||++|+++|.|+++||.++ ...+++| |++ ||. + + +++ .+++.||
T Consensus 165 ~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~-GAv-Gt~~a~~~~~~~~~~~~v~~-~~~~~LG 238 (456)
T PRK09285 165 PMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKIN-GAV-GNYNAHLAAYPEVDWHAFSR-EFVESLG 238 (456)
T ss_pred eeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhcc-ccc-ccHHHHhhhcCCccHHHHHH-HHHHHhC
Confidence 9999999999999999999999999999999999999 3334454 444 542 1 3 444 4555999
Q ss_pred CCCCCCCchhh-hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc-CCCCCCCCCCCCCCCCccHHHHHHHH
Q 016508 143 FTAPMRNSIDA-VSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITP-SDSVSTGSSIMPQKKNPDPMELVRGK 220 (388)
Q Consensus 143 ~~~~~~n~~~a-~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~-~~~~~~gSS~MP~K~NP~~~E~i~~~ 220 (388)
|.. |+++| +.+||++++++++++.++++|+|||+|+++|++ +||+.+ ++++++|||+|||||||+.+|+++++
T Consensus 239 L~~---~~~~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~ 313 (456)
T PRK09285 239 LTW---NPYTTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQKTKAGEIGSSTMPHKVNPIDFENSEGN 313 (456)
T ss_pred CCC---CCCccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhccCCCCCCCCCCCCCCcCchHHHHHHHH
Confidence 975 35676 699999999999999999999999999999999 777654 46789999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHhcC-ccccccccccc--cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccCh-hHHHHHH
Q 016508 221 SARVIGDLVTLLTLCKGL-PLAYNRDLQED--KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGY-LDATTLA 296 (388)
Q Consensus 221 a~~~~g~~~~~~~~~~~~-~~~~~rd~~~~--~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~-~~a~~la 296 (388)
++.+.+....+. .++ .++|+||++++ ...+++++..+..+++.+..++++|+||+++|++|++.++ ++++.++
T Consensus 314 a~~~~~~~~~~~---~~~~~~~~eRD~~~~~~e~~~~~~~~~~~~~l~~~~~~l~~L~V~~~rm~~nl~~~~~~~sE~~~ 390 (456)
T PRK09285 314 LGLANALLEHLA---AKLPISRWQRDLTDSTVLRNLGVAFGYSLIAYDSLLKGLGKLEVNEARLAEDLDANWEVLAEPIQ 390 (456)
T ss_pred HHHHHHHHHHHH---hhccHHhhCCcCchhhhhcchHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCcchHHHHH
Confidence 999998887554 366 68899999764 2335999999999999999999999999999999998753 4455555
Q ss_pred HHHHHcCCChHHHHHHHHHHHHHHHHcCCChHHh---hHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHH
Q 016508 297 DYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDL---SLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTE 372 (388)
Q Consensus 297 ~~L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~ 372 (388)
..|.+ +++.+||++|+++++.+.++|.++.++ +.++. .+ .++| .++||+. |.|.++..+++
T Consensus 391 ~~l~~--~gr~~A~~~v~~~~~~~~~~~~~~~e~~~~l~~~~-~~----~~~l-~~~~p~~-------ylg~a~~~~~~ 454 (456)
T PRK09285 391 TVMRR--YGIENPYEKLKELTRGKRITAEALREFIDGLDLPE-EA----KARL-KALTPAN-------YIGLAAELADE 454 (456)
T ss_pred HHHHH--hChHhHHHHHHHHHHHHHhccCCHHHHHHHhcCCH-hH----HHHH-HcCCHHH-------HHhhHHHHHHh
Confidence 55554 899999999999999999999999998 54432 11 2678 9999996 88888877764
No 37
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=2.9e-64 Score=493.62 Aligned_cols=261 Identities=26% Similarity=0.316 Sum_probs=241.1
Q ss_pred CCCchHHHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccc
Q 016508 5 DREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 83 (388)
Q Consensus 5 ~~ed~~~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q 83 (388)
...+.+..+|+.+.+++| +.|+|||+|+||||+++|+++|++|+.+..+.+.+..|+++|.++|++|++|+||||||+|
T Consensus 69 ~~~~~~~~~~~~l~~~~g~~~g~~vH~G~S~nD~~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q 148 (338)
T TIGR02426 69 TAGNPVIPLVKALRKAVAGEAARYVHRGATSQDVIDTSLMLQLRDALDLLLADLGRLADALADLAARHRDTPMTGRTLLQ 148 (338)
T ss_pred hcCCcHHHHHHHHHHHhCccccCcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceecccCCC
Confidence 356677899999999998 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCC-----CCCHHHHHHHhCCCCCCCCchhhhhchH
Q 016508 84 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGL-----PIDRFMTAEALEFTAPMRNSIDAVSDRD 158 (388)
Q Consensus 84 ~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~-----~~~r~~~a~~LG~~~~~~n~~~a~~~rd 158 (388)
||||+||||||++|+++|.||++||.+++++++.+|+||++++|+++ ++ ++++|+.|||..+.. +|+++||
T Consensus 149 ~A~P~T~G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lGgavGtg~~~~~~~~~v-~~~~a~~LGl~~~~~---~~~~~rd 224 (338)
T TIGR02426 149 QAVPTTFGLKAAGWLAAVLRARDRLAALRTRALPLQFGGAAGTLAALGTRGGAV-AAALAARLGLPLPAL---PWHTQRD 224 (338)
T ss_pred cCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcchhccCCCccchHHHH-HHHHHHHhCcCCCCC---cchhhhH
Confidence 99999999999999999999999999999999999999876656553 24 789999999987642 4789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcC
Q 016508 159 FVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGL 238 (388)
Q Consensus 159 ~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~ 238 (388)
++++++++++.++.+|+|||+|+++|+++||||+.+ ++++||||||||+||+.+|.++++|+.+.|...+++. ++
T Consensus 225 ~~~e~~~~l~~la~~l~ria~Dl~l~s~~e~gei~~--~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~---~~ 299 (338)
T TIGR02426 225 RIAEFGSALALVAGALGKIAGDIALLSQTEVGEVFE--AGGGGSSAMPHKRNPVGAALLAAAARRVPGLAATLHA---AL 299 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhh--CCCCCcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHH---hc
Confidence 999999999999999999999999999999999976 5689999999999999999999999999999987654 68
Q ss_pred ccccccccc---cccchHHHHHHHHHHHHHHHHHhhhcc
Q 016508 239 PLAYNRDLQ---EDKEPTFDSVKTIVGMLEVSAEFAQNI 274 (388)
Q Consensus 239 ~~~~~rd~~---~~~~~l~~~~~~~~~~l~~~~~~l~~l 274 (388)
+.++|||.. ..|..+++++..+..+++.+..++++|
T Consensus 300 ~~~~Er~~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~l 338 (338)
T TIGR02426 300 PQEHERSLGGWHAEWETLPELVRLTGGALRQAQVLAEGL 338 (338)
T ss_pred hHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999974 357889999999999999999999875
No 38
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=4.5e-63 Score=495.74 Aligned_cols=294 Identities=19% Similarity=0.167 Sum_probs=253.4
Q ss_pred HHHHHHHHHHhC------CCCCccccCCChHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccccc
Q 016508 11 MNIEAALTDIIG------EPAKKLHTARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 83 (388)
Q Consensus 11 ~~~E~~l~~~~g------~~~~~lH~g~SsnDi~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q 83 (388)
.++|++|.+++| +.++|||+|+|||||++|+++|++|+.+. .+.+.|..++++|.++|++|++|+|+||||+|
T Consensus 72 ~al~~~l~~~~g~~~~~~~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q 151 (425)
T cd01598 72 KAVEYFLKEKFETLGLLKKIKEFIHFACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQ 151 (425)
T ss_pred HHHHHHHHHHhcccccchhhhhHhccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCc
Confidence 478999999997 35789999999999999999999999995 67899999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCC-----------CCCCHHHHHHHhCCCCCCCCchh
Q 016508 84 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG-----------LPIDRFMTAEALEFTAPMRNSID 152 (388)
Q Consensus 84 ~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~-----------~~~~r~~~a~~LG~~~~~~n~~~ 152 (388)
||||||||||+++|+++|.|+++||.++. ..+.+|| ++ ||. ++..++.+++.|||..+ +.+
T Consensus 152 ~A~P~TfG~~~a~w~~~L~r~~~RL~~~~---~~g~~gG-av-Gt~~~~~~~~~~~~~~~~~~~~a~~LgL~~~---~~~ 223 (425)
T cd01598 152 PATPTTLGKELAVFVYRLERQYKQLKQIE---ILGKFNG-AV-GNFNAHLVAYPDVDWRKFSEFFVTSLGLTWN---PYT 223 (425)
T ss_pred cCeehhHHHHHHHHHHHHHHHHHHHHHHH---HhheeeC-ch-hhhhhhhhccCcccHHHHHHHHHHHhCcCCC---Ccc
Confidence 99999999999999999999999999983 4445664 44 431 12235679999999754 355
Q ss_pred h-hhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc-cCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHH
Q 016508 153 A-VSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFIT-PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVT 230 (388)
Q Consensus 153 a-~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~-~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~ 230 (388)
| +.+||++++++++++.++++|+|||+|+++|+++ ||+. .++++++|||+||||+||+.+|+++++++.+.+....
T Consensus 224 ~~v~~rD~~~e~~~~La~la~~L~kia~Di~ll~s~--ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~~~ 301 (425)
T cd01598 224 TQIEPHDYIAELFDALARINTILIDLCRDIWGYISL--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALLNH 301 (425)
T ss_pred cchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--cceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHHHH
Confidence 6 7999999999999999999999999999999997 5555 3568899999999999999999999999999888865
Q ss_pred HHHHHhcC-ccccccccccc--cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChH
Q 016508 231 LLTLCKGL-PLAYNRDLQED--KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFR 307 (388)
Q Consensus 231 ~~~~~~~~-~~~~~rd~~~~--~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r 307 (388)
+. .++ +++|+||++++ +..+++++..+..+++.+..++++|+||+++|++|++.++.+.++.++.+++. ++++
T Consensus 302 ~~---~~~~~~~~eRD~~~~~~e~~~~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~~~~i~sE~~~~~l~~-~gr~ 377 (425)
T cd01598 302 LS---AKLPISRLQRDLTDSTVLRNIGVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDANWEVLAEPIQTVMRR-YGIP 377 (425)
T ss_pred HH---hhhhhhhhcccccchhhhccHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCHHHHHHHHHHHh-cChH
Confidence 44 366 78999999764 34459999999999999999999999999999999987643455555555555 8999
Q ss_pred HHHHHHHHHHH
Q 016508 308 TSHDIVGKAVA 318 (388)
Q Consensus 308 ~Ah~~v~~~~~ 318 (388)
+||++|+++++
T Consensus 378 ~Ah~~V~~~~~ 388 (425)
T cd01598 378 NPYEKLKDLTR 388 (425)
T ss_pred hHHHHHHHHhC
Confidence 99999999985
No 39
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=3.6e-62 Score=480.17 Aligned_cols=261 Identities=23% Similarity=0.206 Sum_probs=239.2
Q ss_pred CCchHHHHHHHHHHHhC-CCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccc
Q 016508 6 REDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQR 84 (388)
Q Consensus 6 ~ed~~~~~E~~l~~~~g-~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~ 84 (388)
.++.+..+++.+.+++| +.++|||+|+||||+++|+++|++|+.+..+.+.|..++++|.++|++|++|||+||||+||
T Consensus 79 ~g~~v~~~v~~l~~~~g~~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~ 158 (351)
T PRK05975 79 DGVVVPALVRQLRAAVGEEAAAHVHFGATSQDVIDTSLMLRLKAASEILAARLGALIARLDALEATFGQNALMGHTRMQA 158 (351)
T ss_pred cCCcHHHHHHHHHHHhCchhhCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCCc
Confidence 34566789999999997 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCC----CCCCHHHHHHHhCCCCCCCCchhhhhchHHH
Q 016508 85 AQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG----LPIDRFMTAEALEFTAPMRNSIDAVSDRDFV 160 (388)
Q Consensus 85 A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~----~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~ 160 (388)
||||||||||++|+++|.|+++||.+++++++.+||||+++++.. .+.+++++|+.|||..+ .+|+.+||++
T Consensus 159 A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGGAvGt~~~~~~~~~~~~~~~a~~LGl~~~----~~~~~~rD~~ 234 (351)
T PRK05975 159 AIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGGAAGTLEKLGGKAAAVRARLAKRLGLEDA----PQWHSQRDFI 234 (351)
T ss_pred CeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccHhccCccCCCcHHHHHHHHHHHhCcCCC----cchhhccHHH
Confidence 999999999999999999999999999999999999985543222 34678999999999643 1678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcc
Q 016508 161 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240 (388)
Q Consensus 161 ~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 240 (388)
++++++++.++.+|+|||+|+++|+++| ||+.+|. ++||||||||+||+.+|.++++++.+.+...++. .+++.
T Consensus 235 ~e~~~~la~la~~l~kiA~Di~ll~s~e-gev~~~~--~~GSS~MPhKrNPv~~E~i~~~ar~~~~~~~~~~---~~~~~ 308 (351)
T PRK05975 235 ADFAHLLSLVTGSLGKFGQDIALMAQAG-DEISLSG--GGGSSAMPHKQNPVAAETLVTLARFNATQVSGLH---QALVH 308 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcccCCC--CCccCCCCCCcCcHHHHHHHHHHHHHHHHHHHHH---hcccc
Confidence 9999999999999999999999999999 9999875 6999999999999999999999999999988655 48899
Q ss_pred ccccccc---cccchHHHHHHHHHHHHHHHHHhhhccee
Q 016508 241 AYNRDLQ---EDKEPTFDSVKTIVGMLEVSAEFAQNITF 276 (388)
Q Consensus 241 ~~~rd~~---~~~~~l~~~~~~~~~~l~~~~~~l~~l~v 276 (388)
++|||.. ..|..|++++..+..++..+..++++|++
T Consensus 309 ~~er~~~~~~~e~~~lp~~~~~~~~~l~~~~~ll~~l~~ 347 (351)
T PRK05975 309 EQERSGAAWTLEWMILPQMVAATGAALRLALELAGNIRR 347 (351)
T ss_pred hhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Confidence 9999974 45888999999999999999999999874
No 40
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=3.4e-60 Score=479.01 Aligned_cols=335 Identities=16% Similarity=0.169 Sum_probs=270.4
Q ss_pred HHHHHHHHHHhC---C---CCCccccCCChHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccc
Q 016508 11 MNIEAALTDIIG---E---PAKKLHTARSRNDQVLTDFRLWCRDAIDT-IVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 83 (388)
Q Consensus 11 ~~~E~~l~~~~g---~---~~~~lH~g~SsnDi~~ta~~l~lr~~~~~-l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q 83 (388)
.++|+.+++++| + .++|+|+|+|||||++|+++|++|+++.. +.+.|..++++|.++|++|++|+|+||||+|
T Consensus 97 ~a~~~~l~~~~~~~~~~~~~~~~vH~G~TsqDi~dTa~~L~lr~a~~~~l~~~L~~l~~aL~~lA~~~~dt~m~GRTH~Q 176 (458)
T PLN02848 97 KAVEYFLKQKCKSHPELAKVLEFFHFACTSEDINNLSHALMLKEGVNSVVLPTMDEIIKAISSLAHEFAYVPMLSRTHGQ 176 (458)
T ss_pred HHHHHHHHHHhccccchhhhhCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccCc
Confidence 467999999996 2 56899999999999999999999999999 9999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCC------CCC-CCHHH----HHHHhCCCCCCCCchh
Q 016508 84 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT------GLP-IDRFM----TAEALEFTAPMRNSID 152 (388)
Q Consensus 84 ~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt------~~~-~~r~~----~a~~LG~~~~~~n~~~ 152 (388)
||+||||||||++|+++|.|+++||.++. ..+.+|| ++ || +++ .|+.. +++.|||... +..+
T Consensus 177 ~A~PiTfG~~~a~w~~~L~r~~~rL~~~~---l~g~~~G-Av-Gt~aa~~~~~~~~d~~~v~~~la~~LGL~~~--~~~~ 249 (458)
T PLN02848 177 PASPTTLGKEMANFAYRLSRQRKQLSEVK---IKGKFAG-AV-GNYNAHMSAYPEVDWPAVAEEFVTSLGLTFN--PYVT 249 (458)
T ss_pred cceeehHHHHHHHHHHHHHHHHHHHHHHH---hccEeec-cc-chhhhhhhccCCCCHHHHHHHHHHHhCCCCC--Cchh
Confidence 99999999999999999999999998872 2345543 33 32 234 66544 5557999741 1234
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHH
Q 016508 153 AVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTL 231 (388)
Q Consensus 153 a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~ 231 (388)
++.+||++++++++++.++.+|+|||+|++.|+ |+||+.++ .++++||||||||+||+.+|+++++++.+.|....+
T Consensus 250 ~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~--e~ge~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~~~~~~~~~~ 327 (458)
T PLN02848 250 QIEPHDYMAELFNAVSRFNNILIDFDRDIWSYI--SLGYFKQITKAGEVGSSTMPHKVNPIDFENSEGNLGLANAELSHL 327 (458)
T ss_pred hHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcCCcccccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999988777 68887643 467999999999999999999999999999999876
Q ss_pred HHHHhc-Cccccccccccc--cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccCh-hHHHHHHHHHHHcCCChH
Q 016508 232 LTLCKG-LPLAYNRDLQED--KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGY-LDATTLADYLVNKQVPFR 307 (388)
Q Consensus 232 ~~~~~~-~~~~~~rd~~~~--~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~-~~a~~la~~L~~~gi~~r 307 (388)
+ ++ +.++++||++++ ...+++++..+..+++.+..++++|+||+++|++|++.++ ++++.++..|++ +++.
T Consensus 328 ~---~~~~~~~~eRD~~~s~~e~~~~~~~~~~~~al~~~~~~l~~L~v~~~rm~~nl~~~~~~~sE~~~~~l~~--~G~~ 402 (458)
T PLN02848 328 S---MKLPISRMQRDLTDSTVLRNMGVGLGHSLLAYKSTLRGIGKLQVNEARLAEDLDQTWEVLAEPIQTVMRR--YGVP 402 (458)
T ss_pred H---hcCcchhhccccchhhhhccHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHccchhHHHHHHHHHHH--hChH
Confidence 6 57 666799999764 2335999999999999999999999999999999998864 357777777775 7789
Q ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHH--HHHhhcCHHHHhhhhccCCCccHHHHH
Q 016508 308 TSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDK--DVYEYLGVENAIRKFSSFGSTGSACVT 371 (388)
Q Consensus 308 ~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~ldp~~~v~~~~~~gg~a~~~v~ 371 (388)
+||++|+++++.-.-....+.+.... + .+.++ +--..|.|.. |.|.+++.++
T Consensus 403 ~A~e~v~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~~~~-------y~g~~~~~~~ 456 (458)
T PLN02848 403 EPYEKLKELTRGRAVTKESMREFIEG----L-ELPEEAKDQLLKLTPHT-------YIGAAAALAL 456 (458)
T ss_pred HHHHHHHHHHHHccCCHHHHHHHHHH----c-CCCHHHHHHHHhCCchh-------hhchHHHHHh
Confidence 99999999985421111122222211 1 12222 1223678885 9999988776
No 41
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=4.2e-60 Score=460.76 Aligned_cols=225 Identities=40% Similarity=0.553 Sum_probs=210.9
Q ss_pred CCCCCCchHHHHHHHHHHHhC-------CCCCccccCCChHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC
Q 016508 2 WRTDREDVHMNIEAALTDIIG-------EPAKKLHTARSRNDQVLTDFRLWCRDAI-DTIVRSIQRLQVALVKLALKNEG 73 (388)
Q Consensus 2 ~~~~~ed~~~~~E~~l~~~~g-------~~~~~lH~g~SsnDi~~ta~~l~lr~~~-~~l~~~l~~l~~~L~~~A~~~~~ 73 (388)
+++..+|+|..++..+.+.+| +.++|||+|+||||+++|+++|++|+++ ..+.+.|..++++|.++|++|++
T Consensus 72 ~~~~~~~~~~~~~~~l~~~~~e~~~~~~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~~L~~~a~~~~~ 151 (312)
T PF00206_consen 72 LDEIEEDIGHAVEANLNEVLGELLGEPPEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKALIDALAELAEEHKD 151 (312)
T ss_dssp HCSCSSSHHHHHHHHHHHHHHHHHTHSSGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhhhhccchhHHHHHHHHHhhhhhhccccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 467889999999998888776 7899999999999999999999999999 56999999999999999999999
Q ss_pred ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHH---HHHHHhC-CCC---C
Q 016508 74 LIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF---MTAEALE-FTA---P 146 (388)
Q Consensus 74 ~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~---~~a~~LG-~~~---~ 146 (388)
|+||||||+|||+||||||||++|+++|.|+++||.+++++++.+|||||+.+|++++++++ ++++.|| |.. +
T Consensus 152 t~~~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~~~~~~~~~L~~~~~l~~~ 231 (312)
T PF00206_consen 152 TPMPGRTHGQPAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDREFQERVAEELGEFTGLGVP 231 (312)
T ss_dssp SEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHHHHHHHHHHHHHHHCSTEE
T ss_pred ceeccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcchhhhHHhhhhhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999888999999987 8999999 765 7
Q ss_pred CCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCC-CCCCCCCCCCCCccHHHHHHHHHHHHH
Q 016508 147 MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSV-STGSSIMPQKKNPDPMELVRGKSARVI 225 (388)
Q Consensus 147 ~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~-~~gSS~MP~K~NP~~~E~i~~~a~~~~ 225 (388)
..|..+|+.+||++++++++++.++++|+|||+|+++|+|+|+|++++|.+. ++|||+||||+||+.+|+++++|++++
T Consensus 232 ~~~~~~~~~~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s~e~g~~~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~v~ 311 (312)
T PF00206_consen 232 APNWHDAVSSRDRLAELASALALLAGTLSKIAEDLRLLSSTEIGEVEEPFPEGQVGSSIMPHKRNPVILENIRGLARQVI 311 (312)
T ss_dssp CSSHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGGGSSSCSSSSTTCEETHHHHHHHHHHHHHH
T ss_pred hhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeecccccccCCCccCCCCCCCHHHHHHHHhhhcCc
Confidence 7888899999999999999999999999999999999999999999987544 559999999999999999999999998
Q ss_pred h
Q 016508 226 G 226 (388)
Q Consensus 226 g 226 (388)
|
T Consensus 312 G 312 (312)
T PF00206_consen 312 G 312 (312)
T ss_dssp H
T ss_pred C
Confidence 7
No 42
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-57 Score=433.85 Aligned_cols=335 Identities=22% Similarity=0.265 Sum_probs=303.2
Q ss_pred chHHHHHHHHHHHhC-CCCCc--------cccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Q 016508 8 DVHMNIEAALTDIIG-EPAKK--------LHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPG 78 (388)
Q Consensus 8 d~~~~~E~~l~~~~g-~~~~~--------lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~g 78 (388)
+.+..|-++..|.+| +.|.| +.+++|+||+.+|++++.+...+.++.+.+..|++++..||++|++++++|
T Consensus 107 N~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~l~~L~~al~~L~~af~~Ka~EF~~ilKmG 186 (471)
T COG1027 107 NANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKSLRKLIDALEDLIEAFERKAKEFADILKMG 186 (471)
T ss_pred cHHHHHHHHHHHHhcCCCCceeeeCCccccchhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Confidence 346677888899999 77776 349999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHH-------HHHHHhCCC-CCCCCc
Q 016508 79 YTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF-------MTAEALEFT-APMRNS 150 (388)
Q Consensus 79 rTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~-------~~a~~LG~~-~~~~n~ 150 (388)
|||+|+|.|+|+|+.|.+|+..|.||..||.++.+++....+||+|+ |||.+.+++ .+++..|+. .+.+|.
T Consensus 187 RTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAi-GTGiNa~~~Y~~~vv~~l~evtg~~~~~A~~L 265 (471)
T COG1027 187 RTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAI-GTGINAPKGYIELVVKKLAEVTGLPLVPAENL 265 (471)
T ss_pred hhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceee-ccCcCCChhHHHHHHHHHHHHhCCCCccchhH
Confidence 99999999999999999999999999999999999999999999999 999988764 489999997 788999
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh
Q 016508 151 IDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGD 227 (388)
Q Consensus 151 ~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e---~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~ 227 (388)
++++.+.|.+++++..|..++..|+|||+||||++|+| +||+.+| +.|+||||||.|+||+++|.+.+.|.+|+|+
T Consensus 266 ieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP-~~Q~GSSIMPgKVNPVipEvvnQvcf~ViGn 344 (471)
T COG1027 266 IEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLP-AVQAGSSIMPGKVNPVIPEVVNQVCFKVIGN 344 (471)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccCcccccCC-CCCCCCCCCCCCcCchhHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999 7899996 7899999999999999999999999999999
Q ss_pred HHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCCh
Q 016508 228 LVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPF 306 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~ 306 (388)
..++.++.+..+++.+-=-......+++++..+..++..++ +|+.+|+.|+++|++++..+.-..|.+-+++
T Consensus 345 D~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ekcI~gItaN~e~C~~~v~nSigivTaLnp~i------- 417 (471)
T COG1027 345 DTTITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLREKCIDGITANEERCEEYVENSIGIVTALNPYI------- 417 (471)
T ss_pred hHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCHHHHHHHHHhhhHHHHhhcccc-------
Confidence 99999988887666541000012347899999999999986 6999999999999999999876689998888
Q ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 307 RTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 307 r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
+|+.+..+++.|.++|++..++.++.- .++++++..+|+|+.+..
T Consensus 418 --Gy~~~~~iaK~a~~tgksv~evvLe~g----~Lteeel~~Il~~~~m~~ 462 (471)
T COG1027 418 --GYENAAIIAKEALETGKSVREVVLERG----LLTEEELDDILSPENMTK 462 (471)
T ss_pred --cchHHHHHHHHHHHcCCcHHHHHHHhC----CCCHHHHHHHhChhhcCC
Confidence 699999999999999999999998752 478999999999998654
No 43
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=1.3e-56 Score=427.77 Aligned_cols=335 Identities=23% Similarity=0.254 Sum_probs=296.1
Q ss_pred chHHHHHHHHHHHhC-CCCC--ccc------cCCChHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc
Q 016508 8 DVHMNIEAALTDIIG-EPAK--KLH------TARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVP 77 (388)
Q Consensus 8 d~~~~~E~~l~~~~g-~~~~--~lH------~g~SsnDi~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~~~~~ 77 (388)
+++..|-++..+.+| +.|. .|| +|+||||+++||+++....++. +|++.|..|.++|.++|++|++++++
T Consensus 104 N~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~LiPaL~~L~~~L~~Ka~~~~~iVKi 183 (462)
T COG0114 104 NVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNRLIPALKHLIKTLAAKAEEFADVVKI 183 (462)
T ss_pred cHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 467778888888887 4442 244 9999999999999999999987 69999999999999999999999999
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCH-------HHHHHHhCCC-CCCCC
Q 016508 78 GYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR-------FMTAEALEFT-APMRN 149 (388)
Q Consensus 78 grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r-------~~~a~~LG~~-~~~~n 149 (388)
||||+|+|+|.|||+.|++|+..|.+.++|+....+.+...++||+|+ |||++..+ +++++..|+. .+.+|
T Consensus 184 GRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAV-GTGlNa~p~f~ekva~~i~~~TG~~F~~a~N 262 (462)
T COG0114 184 GRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAV-GTGLNAHPEFGEKVAEELAELTGLPFVTAPN 262 (462)
T ss_pred CcccccccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCccc-ccCcCCCccHHHHHHHHHHHHhCCCcccCCc
Confidence 999999999999999999999999999999999999999999999999 99998764 4588888986 46789
Q ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHh
Q 016508 150 SIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIG 226 (388)
Q Consensus 150 ~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e---~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g 226 (388)
.+.+..+.|.++++...|..++..|.|||+|+|+|.|+| +||+++| +.++||||||.|+||+.+|.+...|.+|+|
T Consensus 263 kF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lP-enePGSSIMPGKVNPtq~EA~tmv~~QV~G 341 (462)
T COG0114 263 KFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELP-ENEPGSSIMPGKVNPTQCEALTMVAAQVIG 341 (462)
T ss_pred HHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccC-CCCCCccCCCCCCCchhHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999 7999997 679999999999999999999999999999
Q ss_pred hHHHHHHHHhcCccccccccccccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCC
Q 016508 227 DLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVP 305 (388)
Q Consensus 227 ~~~~~~~~~~~~~~~~~rd~~~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~ 305 (388)
+..++..+-....++.+-=..-..-.+.+++.++..++..|. .|+.+|++|+++|+++++.+.++.|.+.+.+
T Consensus 342 nd~ai~~ags~GnFELNv~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~~~l~~SlmLVTaLnp~I------ 415 (462)
T COG0114 342 NDAAIAFAGSQGNFELNVFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIKELLERSLMLVTALNPHI------ 415 (462)
T ss_pred chHHHHHhhccCceeeccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHhhCchHHHhccccc------
Confidence 998887654444333321000111236799999999999986 7999999999999999999988899999988
Q ss_pred hHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 306 FRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 306 ~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
+|+...++++.|.++|++++|...+.- .++++++++++||+.++.
T Consensus 416 ---GYdkAa~IAK~A~keg~tlreaa~~~G----~lte~efd~~v~Pe~mv~ 460 (462)
T COG0114 416 ---GYDKAAKIAKKAHKEGTTLREAALELG----LLSEEEFDKLVDPEKMVG 460 (462)
T ss_pred ---chHHHHHHHHHHHHCCCcHHHHHHHcC----CCCHHHHHHhcCHHHhcC
Confidence 699999999999999999999886542 467999999999998764
No 44
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.4e-45 Score=353.51 Aligned_cols=352 Identities=16% Similarity=0.135 Sum_probs=303.9
Q ss_pred HHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccccchh
Q 016508 11 MNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLL 90 (388)
Q Consensus 11 ~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~P~Tf 90 (388)
++..+.+.+.|+-..|++|+|.|+.++.|.+..+.+|++.+.+.+.|...++.+...+.+|+++++.||||+|+|+|+||
T Consensus 86 mahvh~~~~~cp~aagiihlgatsc~vtdnadli~~rd~~k~i~~~l~~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tf 165 (481)
T KOG2700|consen 86 MAHVHSFGELCPIAAGIIHLGATSCFVTDNADLIELRDASKLILPYLAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTF 165 (481)
T ss_pred HHHHHHHHhhcchhcceEEeeeeeeeecCCccceechhHHHHHHHHHHHHHHHHHHHHHHhccceecccccCccchhhHH
Confidence 45667788888766779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCC-------CCCCH------HHHHHHhCCCCCCCCchhhhhch
Q 016508 91 QHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG-------LPIDR------FMTAEALEFTAPMRNSIDAVSDR 157 (388)
Q Consensus 91 G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~-------~~~~r------~~~a~~LG~~~~~~n~~~a~~~r 157 (388)
|++.+-|..+|.+|+++|..+...+....++|+ . ||- .+... +.+++.+||..+.. .+-++.+|
T Consensus 166 gkr~~~~~qel~~~l~~f~~~~~~~~~~~~kga-~-gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~-~TGQt~sr 242 (481)
T KOG2700|consen 166 GKRMCLWIQELLRDLERFHRARTDVRFRGLKGA-T-GTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYI-VTGQTYSR 242 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccccccc-h-hhHHHHHHhhcccHHHHHHHHHHHHHHhCCCcccc-ccCCcCCc
Confidence 999999999999999999999999999999864 3 552 12111 25779999986542 23589999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccC-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHh
Q 016508 158 DFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCK 236 (388)
Q Consensus 158 d~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~-~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~ 236 (388)
+...++.+.|++++++..|+|.|++++++ |+|++.| ++.+.|||.||+||||..+|.+.++++.+..+....+. .
T Consensus 243 ~~~~~~~~~la~lgat~~k~~Tdirll~~--~~ev~epFea~q~gsSaMp~krNpm~~E~itslar~l~~~v~~al~--~ 318 (481)
T KOG2700|consen 243 KTDAEEVAPLASLGATAHKYATDIRLLAK--FAEVEEPFEAHQIGSSAMPYKRNPMRCERITSLARHLRPYVTQALN--T 318 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhccccccccccccCCCCCCCchhHHHhHHHHHHHHHHHHHhh--h
Confidence 99999999999999999999999999999 9999876 68899999999999999999999999999999876543 1
Q ss_pred cCccccccccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHH
Q 016508 237 GLPLAYNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHD 311 (388)
Q Consensus 237 ~~~~~~~rd~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~ 311 (388)
....|++|++.++ +..+|++|..+...|..+..+++++.|.+++|+++... +++..+.+.+.|+++|.+|++||+
T Consensus 319 ~~~qw~Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~i~r~i~~e~~~~~~eni~mAL~~~g~srq~ahe 398 (481)
T KOG2700|consen 319 ASVQWHERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGLVVYPKVIERNIRDELPFMVLENIIMALVKAGLSRQEAHE 398 (481)
T ss_pred HHHHHhhcccccccccceechHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHhhhhHHHHHHHHHHHHHhcccHHHHHH
Confidence 3557899998665 44599999999999999999999999999999999976 578899999999999999999999
Q ss_pred HHHHHHHHH----HHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHH
Q 016508 312 IVGKAVALC----VSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHS 376 (388)
Q Consensus 312 ~v~~~~~~a----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~ 376 (388)
.++.+...+ .++|..+.++.............+++..+|||.+ +-|-++.++.+++..
T Consensus 399 ~I~~L~~~a~~~v~~e~g~~~~ie~~k~~~~~~~v~ee~~~ll~p~~-------f~gra~dQie~~v~~ 460 (481)
T KOG2700|consen 399 GIRKLSHQAAQVVKQEGGDNDLIERAKEDPTFKPVKEELDSLLDPLN-------FTGRAVDQIEKFVPK 460 (481)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHhcccccccchHHHHHhhccchh-------cccccHHHHHHHhhh
Confidence 999999887 7788875544332211122345789999999996 889999999888763
No 45
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=1.2e-45 Score=343.21 Aligned_cols=332 Identities=23% Similarity=0.273 Sum_probs=282.1
Q ss_pred chHHHHHHHHHHHhC-CCCC-ccc------cCCChHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccc
Q 016508 8 DVHMNIEAALTDIIG-EPAK-KLH------TARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVPG 78 (388)
Q Consensus 8 d~~~~~E~~l~~~~g-~~~~-~lH------~g~SsnDi~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~~~~~g 78 (388)
+.+..|-++.+|++| +.|. .+| ..+||||.++|++++..-..+. .+++.|..|.++|..++++|+|++.+|
T Consensus 130 N~NEVIsNrAieilGg~~GsK~VHPNdHvN~SQSSNDTFPtamHIa~~~ei~~~L~P~l~~L~~aL~aKs~EfkdIiKIG 209 (487)
T KOG1317|consen 130 NANEVISNRAIEILGGKLGSKKVHPNDHVNKSQSSNDTFPTAMHIAAATEINSRLIPALTNLRDALEAKSKEFKDIIKIG 209 (487)
T ss_pred cHHHHHHHHHHHHhcccccCcccCCccccccccccCCccchHHHHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHhc
Confidence 456778889999987 6654 355 8999999999999999988886 699999999999999999999999999
Q ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCC-------HHHHHHHhCCC-CCCCCc
Q 016508 79 YTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPID-------RFMTAEALEFT-APMRNS 150 (388)
Q Consensus 79 rTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~-------r~~~a~~LG~~-~~~~n~ 150 (388)
|||.|+|.|.|+|+.|++|.+++..-++|+....+|+.+...||+|+ |||++.- -++++++.|+. ...+|-
T Consensus 210 RTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAV-GTGLNTr~GFaeK~a~~va~ltgLpFvtApNk 288 (487)
T KOG1317|consen 210 RTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQLAQGGTAV-GTGLNTRKGFAEKIAARVAELTGLPFVTAPNK 288 (487)
T ss_pred ccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHHHHHhcCCccc-cccccccccHHHHHHHHHHHHhCCCceecccH
Confidence 99999999999999999999999999999999999999999999998 9988642 24688999987 355788
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhh
Q 016508 151 IDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGD 227 (388)
Q Consensus 151 ~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e---~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~ 227 (388)
+.+.+.+|-++|+...|..++.+|.||++|++++.|+| +||+.+| +..+||||||.|+||..+|.+...|.+++|+
T Consensus 289 FEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPRcGlgEL~LP-ENEPGSSIMPGKVNPTQcEamTmvcaQVMGN 367 (487)
T KOG1317|consen 289 FEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLP-ENEPGSSIMPGKVNPTQCEAMTMVCAQVMGN 367 (487)
T ss_pred HHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCCCCCccccccC-CCCCCcccCCCCCCcHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999 7899886 6689999999999999999999999999998
Q ss_pred HHHHHHHHhcCccccccccc--cccchHHHHHHHHHHHHHHHH-HhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCC
Q 016508 228 LVTLLTLCKGLPLAYNRDLQ--EDKEPTFDSVKTIVGMLEVSA-EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQV 304 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~rd~~--~~~~~l~~~~~~~~~~l~~~~-~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi 304 (388)
...+...-.+..++.+ .- .....+..++.++..+.-.|+ .|+.+|+.|++++.+.++.++++.|.+-+.+
T Consensus 368 ~vAvtvgGsnGhFELN--VFKP~i~~nvL~SirLl~D~~~sF~~nCV~GI~aN~erI~kll~eSLMLVTALNPhI----- 440 (487)
T KOG1317|consen 368 HVAVTVGGSNGHFELN--VFKPLIASNVLHSIRLLADASVSFTKNCVVGIEANKERIAKLLNESLMLVTALNPHI----- 440 (487)
T ss_pred ceEEEecccCceeEEe--cchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCCHHHHHHHHHhhhhhhhccCCcc-----
Confidence 7644322222222211 10 012346677777777766665 7999999999999999999988788888777
Q ss_pred ChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHh
Q 016508 305 PFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAI 356 (388)
Q Consensus 305 ~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v 356 (388)
+|+...++++.|.++|.++.+-..+. -.+++++++++.-|+.++
T Consensus 441 ----GYD~aAkiAKtAhKng~TLk~eal~l----G~lTeeqFdewV~Pe~Ml 484 (487)
T KOG1317|consen 441 ----GYDNAAKIAKTAHKNGTTLKEEALKL----GVLTEEQFDEWVVPEKML 484 (487)
T ss_pred ----CchhHHHHHHHHhhcCCcHHHHHHHh----cCCCHHHHHhhhCHHhcc
Confidence 68889999999999999988766543 237899999999999754
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=1.6e-39 Score=302.82 Aligned_cols=208 Identities=40% Similarity=0.475 Sum_probs=193.7
Q ss_pred HHHHHHHHhC-CCCCcc-----ccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccc
Q 016508 13 IEAALTDIIG-EPAKKL-----HTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 86 (388)
Q Consensus 13 ~E~~l~~~~g-~~~~~l-----H~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~ 86 (388)
+|..|.+.+| +.+++. |+|+||||+.+|+.++++|+++..+.+.+..+..++..+|++|++++||||||+|+|+
T Consensus 16 i~~~L~~~~~~~~~~~~~~~~~h~g~s~~d~~~t~~~~~~~~~l~~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~ 95 (231)
T cd01594 16 VEEVLAGRAGELAGGLHGSALVHKGRSSNDIGTTALRLALRDALDDLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQ 95 (231)
T ss_pred HHHHHHHHHHHHhccccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEeecccccccCc
Confidence 7888888888 556666 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHHHHHHH
Q 016508 87 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 166 (388)
Q Consensus 87 P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~~~~ 166 (388)
|+||||+|.+|.+.|.|+.+||.++ +++++++.
T Consensus 96 p~t~g~~~~~~~~~l~~~~~rL~~~-----------------------------------------------~~~~~~~~ 128 (231)
T cd01594 96 PVTLGYELRAWAQVLGRDLERLEEA-----------------------------------------------AVAEALDA 128 (231)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHH-----------------------------------------------HHHHHHHH
Confidence 9999999999999999999999998 89999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccccccCCC-CCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccccccc
Q 016508 167 NSIIAIHLSRLGEEWVLWASEEFGFITPSDS-VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD 245 (388)
Q Consensus 167 l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~-~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd 245 (388)
++.++.+|+||++|+++|++.|++++.+|+. .++|||+||||+||+.+|.+++++..+.|....+..+..+.+.+++.|
T Consensus 129 l~~~~~~l~r~a~d~~~~~~~~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 208 (231)
T cd01594 129 LALAAAHLSKIAEDLRLLLSGEFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKGGPERDNED 208 (231)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHhccccccccc
Confidence 9999999999999999999999999887654 799999999999999999999999999999999888777777788888
Q ss_pred cccccchHHHHHHHHHHHHHHH
Q 016508 246 LQEDKEPTFDSVKTIVGMLEVS 267 (388)
Q Consensus 246 ~~~~~~~l~~~~~~~~~~l~~~ 267 (388)
.+..+..+++.+..+..+++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~ 230 (231)
T cd01594 209 SPSMREILADSLLLLIDALRLL 230 (231)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh
Confidence 8777888899988888887654
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.7e-36 Score=280.36 Aligned_cols=188 Identities=22% Similarity=0.263 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccccCC-CCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCcccccc
Q 016508 166 ANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 244 (388)
Q Consensus 166 ~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~-~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~r 244 (388)
+++.++.+|+|||+|+++|+++||||+.+|. .+++||||||||+||+.+|.+++++..+.|+..+++... +.+++|
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~---~~~~er 98 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQRSEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV---PLWHER 98 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh---HHHhcc
Confidence 8999999999999999999999999999984 889999999999999999999999999999998877643 899999
Q ss_pred ccccc---cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhccc--ChhHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Q 016508 245 DLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGKAVAL 319 (388)
Q Consensus 245 d~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~--~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~ 319 (388)
|++.. |..+++++..+..++..+..++++++||+++|++++.. ++++++++++.|+++|+|||+||++|+++++.
T Consensus 99 d~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~a~~l~~~L~~~g~~~~~Ah~~v~~~~~~ 178 (216)
T PRK08937 99 DLSHSSAERIALPDAFLALDYILNRFVNILENLVVFPENIERNLDKTLGFIATERVLLELVEKGMGREEAHELIREKAME 178 (216)
T ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 98764 57899999999999999999999999999999999986 68889999999999899999999999999999
Q ss_pred HHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHh
Q 016508 320 CVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAI 356 (388)
Q Consensus 320 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v 356 (388)
+.++|+++.++...+......+.+++++.++||++++
T Consensus 179 ~~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~v 215 (216)
T PRK08937 179 AWKNQKDLRELLEADERFTKQLTKEELDELFDPEAFV 215 (216)
T ss_pred HHHhCCCHHHHHHhChHhHhcCCHHHHHHHhCHHhhc
Confidence 9999999999988764333346788899999999754
No 48
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B ....
Probab=99.52 E-value=2.4e-14 Score=108.37 Aligned_cols=69 Identities=42% Similarity=0.727 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 289 YLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 289 ~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
|+++|++|++||++|+|||+||++|+++|+.|.++|+++.++..+++..+.+.+++++.++|||+++|+
T Consensus 1 f~~ATdlAD~LVr~GipFR~AH~iVg~~V~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~V~ 69 (70)
T PF14698_consen 1 FSTATDLADYLVRKGIPFREAHHIVGRLVRLAEEEGKPLSELTLEELQEISPEFEEDVREALDPEASVE 69 (70)
T ss_dssp TGGHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTTS-GGGS-HHHHHHH-TT--GGGGGGSSHHHHHT
T ss_pred CccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhCCHHHHHHHhHHhHHHHHHHCCHHHHhc
Confidence 467999999999999999999999999999999999999999999988888878899999999999886
No 49
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) []. This entry represents the C-terminal, seven alpha-helical, domain of adenylosuccinate lyase [].; PDB: 1YIS_A 1C3U_B 1C3C_A 3C8T_A 2PFM_B 1RE5_D 1Q5N_A 2VD6_D 2J91_B 2X75_A.
Probab=99.08 E-value=3.3e-10 Score=88.43 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=68.7
Q ss_pred ChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccH
Q 016508 288 GYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGS 367 (388)
Q Consensus 288 ~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~ 367 (388)
|+++|+.++..|+++|+++++||++|.++++.|.++|.+|.+++.++......+++++|+++|||.. |.|.++
T Consensus 2 Gli~SE~v~~~L~~~G~gR~~Ah~lv~~~a~~a~~~~~~l~e~l~~d~~i~~~ls~~el~~l~dp~~-------ylg~~~ 74 (81)
T PF10397_consen 2 GLIFSERVMLALAEKGLGRQEAHELVQEAAMEAWENGRDLREVLLADPEIAAYLSEEELEELFDPES-------YLGNAD 74 (81)
T ss_dssp TGGGHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHTTS-HHHHHCTTHHHHTTSHHHHHHHHT-GGG-------GCTTHH
T ss_pred cchHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHhHCCHHHHHhhcCHHH-------HHhhHH
Confidence 5778999999999999999999999999999999999999999987754444577899999999995 999999
Q ss_pred HHHHHHH
Q 016508 368 ACVTEQL 374 (388)
Q Consensus 368 ~~v~~~~ 374 (388)
..+++.+
T Consensus 75 ~i~~rv~ 81 (81)
T PF10397_consen 75 EIVDRVL 81 (81)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 9998764
No 50
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=98.21 E-value=1.2e-05 Score=65.72 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=64.0
Q ss_pred ccccccccc--cchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccCh-hHHHHHHHHHHHcCCChHHHHHHHHHHH
Q 016508 241 AYNRDLQED--KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGY-LDATTLADYLVNKQVPFRTSHDIVGKAV 317 (388)
Q Consensus 241 ~~~rd~~~~--~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~-~~a~~la~~L~~~gi~~r~Ah~~v~~~~ 317 (388)
.++||++++ .+.+..+|....-++..+.+.++.|+||+++|.+.++.+| ++|+.+...+.+.|++ ++|+.++++.
T Consensus 2 R~QRDLtDSTvlRNiGva~~~sliA~~s~lkGl~Kl~vn~~~l~~dL~~nWeVlaEpIQTvmRr~g~~--~pYE~LK~lT 79 (115)
T PF08328_consen 2 RWQRDLTDSTVLRNIGVAFGHSLIAYKSLLKGLGKLEVNEERLAEDLDENWEVLAEPIQTVMRRYGIP--NPYEKLKELT 79 (115)
T ss_dssp STTB-THHHHHHTTHHHHHHHHHHHHHHHHHHHHTEEE-HHHHHHHHCT-GGGGHHHHHHHHHHTT-S--SHHHHHHHHH
T ss_pred cccccchHHHHHHhhhHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHCHHHHHHHHHHHHHHcCCC--CHHHHHHHHH
Confidence 578999886 4679999999999999999999999999999999999985 6699999988887877 7999999988
Q ss_pred H
Q 016508 318 A 318 (388)
Q Consensus 318 ~ 318 (388)
+
T Consensus 80 R 80 (115)
T PF08328_consen 80 R 80 (115)
T ss_dssp T
T ss_pred c
Confidence 4
No 51
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=97.55 E-value=0.00015 Score=52.10 Aligned_cols=53 Identities=17% Similarity=0.271 Sum_probs=42.9
Q ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhh
Q 016508 292 ATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIR 357 (388)
Q Consensus 292 a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~ 357 (388)
+|.+++++ +|+.+.+++++|.++|+++.|+..+.- .+++++++++|||..+++
T Consensus 2 aTaL~p~i---------GYe~aa~iAk~A~~~g~svre~v~~~g----~lt~ee~d~ll~p~~mt~ 54 (55)
T PF10415_consen 2 ATALNPYI---------GYEKAAEIAKEALAEGRSVREVVLEEG----LLTEEELDELLDPERMTN 54 (55)
T ss_dssp GGGGHHHH---------HHHHHHHHHHHHHHHT--HHHHHHHTT----SS-HHHHHHHTSHHHHTT
T ss_pred eeeccchh---------ccHHHHHHHHHHHHcCCCHHHHHHHcC----CCCHHHHHHHcCHHHcCC
Confidence 56677777 799999999999999999999998652 367999999999998764
No 52
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=96.45 E-value=0.063 Score=53.83 Aligned_cols=128 Identities=14% Similarity=0.011 Sum_probs=71.3
Q ss_pred HHHhcCccccccccccccccchhhHHHHHHHHHH------HHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHh
Q 016508 68 ALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQL------ERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEAL 141 (388)
Q Consensus 68 A~~~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l------~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~L 141 (388)
+++..=+++.-+| ||.+.|.+.|.+++..+.-. .-|+.-|....+. ..||-.+-++.+.+|-.|
T Consensus 224 ~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~~~~ev--~epFea~q~gsSaMp~kr------- 293 (481)
T KOG2700|consen 224 TKELGFVPMYIVT-GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLAKFAEV--EEPFEAHQIGSSAMPYKR------- 293 (481)
T ss_pred HHHhCCCcccccc-CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hccccccccccccCCCCC-------
Confidence 3778889999999 99999999999987766433 3333333332221 124433323112222211
Q ss_pred CCCCCCCCchhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHH
Q 016508 142 EFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKS 221 (388)
Q Consensus 142 G~~~~~~n~~~a~~~rd~~~e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a 221 (388)
|++.. |+ +..++.++.-...+... .+.++- .+...|+|.||+|.||+.+++..+..
T Consensus 294 -------Npm~~--------E~---itslar~l~~~v~~al~-----~~~~qw-~Ertl~dSa~~rivlP~~Fl~ad~~L 349 (481)
T KOG2700|consen 294 -------NPMRC--------ER---ITSLARHLRPYVTQALN-----TASVQW-HERTLDDSANRRIVLPDAFLTADGNL 349 (481)
T ss_pred -------CCchh--------HH---HhHHHHHHHHHHHHHhh-----hHHHHH-hhcccccccccceechHHHHHHHHHH
Confidence 22211 11 12222333333333222 223322 24678999999999999999999887
Q ss_pred HHHHhhHH
Q 016508 222 ARVIGDLV 229 (388)
Q Consensus 222 ~~~~g~~~ 229 (388)
.......-
T Consensus 350 ~~~~ni~~ 357 (481)
T KOG2700|consen 350 GTLLNILE 357 (481)
T ss_pred HHHHHHHh
Confidence 76555443
No 53
>PF14748 P5CR_dimer: Pyrroline-5-carboxylate reductase dimerisation; PDB: 2RCY_D 3TRI_A 2IZZ_B 2GR9_B 2GRA_B 2GER_C 1YQG_A 2AG8_A 3GT0_A 2AMF_E ....
Probab=42.99 E-value=81 Score=25.52 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 016508 290 LDATTLADYLVNKQVPFRTSHDIVGKAVA 318 (388)
Q Consensus 290 ~~a~~la~~L~~~gi~~r~Ah~~v~~~~~ 318 (388)
.+.+.+++..++.|+++.+|.+++.+.+.
T Consensus 22 ~~~eal~~a~v~~Gl~~~~A~~lv~~t~~ 50 (107)
T PF14748_consen 22 LFIEALADAAVAQGLPREEARKLVAQTFI 50 (107)
T ss_dssp HHHHHHHHHHHHTT--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 44778888888899999999999988864
No 54
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=37.52 E-value=1.3e+02 Score=27.65 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=32.1
Q ss_pred eeCHHHHHHhccc---C----hhHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 016508 275 TFNVERIKKALPA---G----YLDATTLADYLVNKQVPFRTSHDIVGKAVALC 320 (388)
Q Consensus 275 ~vn~~~m~~~l~~---~----~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a 320 (388)
.++++.+...... + +.+.+.+.+.+++.|+++++|++.+...+.-+
T Consensus 161 ~~~e~~~~~~~a~~gs~pa~~~~~~~a~~~~~~~~Gl~~~~a~~~~~~~~~g~ 213 (245)
T PRK07634 161 LCTEEEVHQLTAVTGSAPAFLYYFAESLIEATKSYGVDEETAKHLVIQMISGS 213 (245)
T ss_pred EECHHHcchHHhhhcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4666665544321 1 24467788888888999999999999888644
No 55
>CHL00180 rbcR LysR transcriptional regulator; Provisional
Probab=33.52 E-value=1.4e+02 Score=28.23 Aligned_cols=52 Identities=13% Similarity=0.020 Sum_probs=42.8
Q ss_pred HHhcCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 016508 69 LKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 121 (388)
Q Consensus 69 ~~~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG 121 (388)
|+.-++...=|| +..-.||..|..|..++..+.+.++++.+........+-|
T Consensus 44 E~~lg~~Lf~R~-~r~~~lT~~G~~l~~~a~~ll~~~~~~~~~~~~~~~~~~g 95 (305)
T CHL00180 44 EKQLNIPLFDRS-KNKASLTEAGELLLRYGNRILALCEETCRALEDLKNLQRG 95 (305)
T ss_pred HHHhCCEEEEec-CCCceECHhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 445677777787 4569999999999999999999999999888777655544
No 56
>TIGR00112 proC pyrroline-5-carboxylate reductase. This enzyme catalyzes the final step in proline biosynthesis. Among the four paralogs in Bacillus subtilis (proG, proH, proI, and comER), ComER is the most divergent and does not prevent proline auxotrophy from mutation of the other three. It is excluded from the seed and scores between the trusted and noise cutoffs.
Probab=30.62 E-value=2.7e+02 Score=25.86 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=33.5
Q ss_pred hcceeCHHHHHHhcc---cC----hhHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 016508 272 QNITFNVERIKKALP---AG----YLDATTLADYLVNKQVPFRTSHDIVGKAVA 318 (388)
Q Consensus 272 ~~l~vn~~~m~~~l~---~~----~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~ 318 (388)
.-+.++++.+..... .+ +.+.+.++++.++.|+++++|.+++.+.+.
T Consensus 136 ~~~~v~E~~~~~~talsgsgPA~~~~~~~al~~~~v~~Gl~~~~A~~lv~~~~~ 189 (245)
T TIGR00112 136 EVVELPEALMDAVTALSGSGPAYVFLFIEALADAGVKQGLPRELALELAAQTVK 189 (245)
T ss_pred CEEEECHHHcchHHhhccCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 335677666654432 22 345778888888899999999999988864
No 57
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=30.25 E-value=2.7e+02 Score=26.65 Aligned_cols=52 Identities=17% Similarity=0.258 Sum_probs=36.9
Q ss_pred HHHhhhcceeCHHHHHHhcc---cC----hhHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 016508 267 SAEFAQNITFNVERIKKALP---AG----YLDATTLADYLVNKQVPFRTSHDIVGKAVA 318 (388)
Q Consensus 267 ~~~~l~~l~vn~~~m~~~l~---~~----~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~ 318 (388)
|..+=+-.+|.++.|..... ++ +.+.+.+++.-++.|+|+++|++.+.+.+.
T Consensus 148 ~~~~G~v~~v~E~~~da~TaisGSgPAyv~~~iEal~~agv~~Gl~~~~A~~l~~~t~~ 206 (266)
T COG0345 148 LSAVGKVVEVEESLMDAVTALSGSGPAYVFLFIEALADAGVRLGLPREEARELAAQTVA 206 (266)
T ss_pred HHhcCCeEEechHHhhHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 33333446788666665542 22 345888888889999999999999998864
No 58
>PF12643 MazG-like: MazG-like family
Probab=30.17 E-value=1.6e+02 Score=23.63 Aligned_cols=57 Identities=23% Similarity=0.281 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 016508 259 TIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVA 318 (388)
Q Consensus 259 ~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~ 318 (388)
.+...++.|....++-.++.++|.+.+..-.+++--+++.| |++|++--+++.+-.+
T Consensus 15 ll~el~elfq~~~~~~~~~~e~i~deLAdvii~~ylLa~rL---Gid~~~lD~~i~~KL~ 71 (98)
T PF12643_consen 15 LLSELLELFQWLTSGSEVAQEAIKDELADVIIYCYLLADRL---GIDFRELDEIIKEKLK 71 (98)
T ss_pred HHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHH
Confidence 34477777888888888888999988876554444455444 8998766555554443
No 59
>PRK12682 transcriptional regulator CysB-like protein; Reviewed
Probab=29.21 E-value=1.7e+02 Score=27.83 Aligned_cols=51 Identities=10% Similarity=0.024 Sum_probs=41.1
Q ss_pred HHhcCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 016508 69 LKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCP 119 (388)
Q Consensus 69 ~~~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~ 119 (388)
|+.-+++..=|+..+...||..|..|..++..+.++++++.+........+
T Consensus 41 E~~lg~~LF~R~~~~~~~lT~~G~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 91 (309)
T PRK12682 41 EEELGIEIFIRHGKRLKGLTEPGKAVLDVIERILREVGNIKRIGDDFSNQD 91 (309)
T ss_pred HHHhCCeeEEECCCCcCccCHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 445677777788777678999999999999999999999987766555443
No 60
>KOG4797 consensus Transcriptional regulator [Transcription]
Probab=28.26 E-value=2e+02 Score=23.58 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=32.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016508 35 NDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNE 72 (388)
Q Consensus 35 nDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~ 72 (388)
-|.+-|-+...+|+.++.+.+++.+|.+....+-+++.
T Consensus 54 MDLVKtHLmfAVREEVe~Lk~qI~eL~er~~~Le~EN~ 91 (123)
T KOG4797|consen 54 MDLVKTHLMFAVREEVEVLKEQIRELEERNSALERENS 91 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37888888999999999999999999888888777653
No 61
>PRK12683 transcriptional regulator CysB-like protein; Reviewed
Probab=27.76 E-value=2.3e+02 Score=26.96 Aligned_cols=49 Identities=16% Similarity=-0.007 Sum_probs=39.6
Q ss_pred HHhcCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 016508 69 LKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNF 117 (388)
Q Consensus 69 ~~~~~~~~~grTh~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~ 117 (388)
|+.-+++..-||..+--.||..|+.|..++..+....+++.+.......
T Consensus 41 E~~lg~~Lf~R~~r~~~~lT~~G~~l~~~a~~il~~~~~~~~~~~~~~~ 89 (309)
T PRK12683 41 EDELGVEIFIRRGKRLTGLTEPGKELLQIVERMLLDAENLRRLAEQFAD 89 (309)
T ss_pred HHHhCCeeEeeCCCCcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4456777777987665589999999999999999999999877766543
No 62
>COG3937 Uncharacterized conserved protein [Function unknown]
Probab=27.07 E-value=1.4e+02 Score=24.36 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcC-CChHHHHHHHHHHHHHHHHcCC
Q 016508 292 ATTLADYLVNKQ-VPFRTSHDIVGKAVALCVSKEC 325 (388)
Q Consensus 292 a~~la~~L~~~g-i~~r~Ah~~v~~~~~~a~~~~~ 325 (388)
+..+++.||++| ++-++|...|.++.+.+.....
T Consensus 26 ~~klvDelVkkGeln~eEak~~vddl~~q~k~~~~ 60 (108)
T COG3937 26 VQKLVDELVKKGELNAEEAKRFVDDLLRQAKEAQG 60 (108)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 568899999986 9999999999999998865433
No 63
>TIGR03544 DivI1A_domain DivIVA domain. This model describes a domain found in Bacillus subtilis cell division initiation protein DivIVA, and homologs, toward the N-terminus. It is also found as a repeated domain in certain other proteins, including family TIGR03543.
Probab=27.02 E-value=1.2e+02 Score=19.11 Aligned_cols=19 Identities=16% Similarity=0.052 Sum_probs=16.3
Q ss_pred CCCccHHHHHHHHHHHHHH
Q 016508 362 FGSTGSACVTEQLHSWVAK 380 (388)
Q Consensus 362 ~gg~a~~~v~~~~~~~~~~ 380 (388)
..|..+.+|+.+|.+....
T Consensus 15 ~rGY~~~eVD~fLd~v~~~ 33 (34)
T TIGR03544 15 LRGYDAAEVDAFLDRVADD 33 (34)
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 5899999999999987654
No 64
>cd04444 DEP_PLEK2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 2-like proteins. Pleckstrin 2 is found in a wide variety of cell types, which suggest a more general role in signaling than pleckstrin 1. Pleckstrin-like proteins contain a central DEP domain, flanked by 2 PH (pleckstrin homology) domains.
Probab=26.61 E-value=1.5e+02 Score=24.34 Aligned_cols=56 Identities=7% Similarity=0.097 Sum_probs=36.5
Q ss_pred HHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHc--CCChHHHHHHHHHHHH
Q 016508 263 MLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK--QVPFRTSHDIVGKAVA 318 (388)
Q Consensus 263 ~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~--gi~~r~Ah~~v~~~~~ 318 (388)
....|..-..||+.-..+-.-......+++.++.++|+.. -++|++|..+...+..
T Consensus 5 L~~~mq~~~~Gik~~~~r~~~k~y~~CF~Gse~VDWLv~~~~~i~R~EAv~l~q~Lmd 62 (109)
T cd04444 5 IVDKMHDSSTGIRHSPNMEQGSTYKKTFLGSALVDWLISNSFAASRLEAVTLASMLME 62 (109)
T ss_pred HHHHHhCCCcCcchhhhhhccccccccccchHHHHHHHHCCCCCCHHHHHHHHHHHHh
Confidence 3344555566777543333222233444599999999986 4899999988887763
No 65
>PF07328 VirD1: T-DNA border endonuclease VirD1; InterPro: IPR009933 This family consists of several T-DNA border endonuclease VirD1 proteins, which appear to be found exclusively in Agrobacterium species. Agrobacterium, a plant pathogen, is capable to stably transform the plant cell with a segment of its own DNA called T-DNA (transferred DNA). This process depends, among others, on the specialised bacterial virulence proteins VirD1 and VirD2 that excise the T-DNA from its adjacent sequences. VirD1 is thought to interact with VirD2 in this process [].; GO: 0004519 endonuclease activity
Probab=25.61 E-value=1.5e+02 Score=25.09 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=53.2
Q ss_pred cCCChHhHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccccchhhHHHHHHHH
Q 016508 30 TARSRNDQVLTDFR---------LWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVE 99 (388)
Q Consensus 30 ~g~SsnDi~~ta~~---------l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q~A~P~TfG~~l~~~~~ 99 (388)
.|.|+|=..-.+.+ -..|+.+..+..++..+...+..++..+..++.|.+--++ |.-..||+.|+..-.
T Consensus 47 lGl~~n~alRVavrri~GFLEiDa~tr~~l~~il~sIg~la~Nin~i~~Aa~~~~~pd~e~f~-aER~~fGk~fA~ld~ 124 (147)
T PF07328_consen 47 LGLSDNMALRVAVRRIGGFLEIDAETRQKLEDILRSIGGLATNINQILKAANRTPRPDYEAFR-AERKAFGKEFADLDA 124 (147)
T ss_pred hCCchhhHHHHHHHHHcchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH-HHHHHHHHHHHHHHH
Confidence 57777755444432 1346777888899999999999999999999999987665 778899999887543
No 66
>TIGR00637 ModE_repress ModE molybdate transport repressor domain. ModE is a molybdate-activated repressor of the molybdate transport operon in E. coli. It consists of the domain represented by this model and two tandem copies of mop-like domain, where Mop proteins are a family of 68-residue molybdenum-pterin binding proteins of Clostridium pasteurianum. This model also represents the full length of a pair of archaeal proteins that lack Mop-like domains. PSI-BLAST analysis shows similarity to helix-turn-helix regulatory proteins.
Probab=24.68 E-value=2.5e+02 Score=22.30 Aligned_cols=53 Identities=15% Similarity=-0.012 Sum_probs=38.8
Q ss_pred HHHhcCcccccccc----ccccccchhhHHHHHHHHHHHHHHHHHHHHHh-hhccccC
Q 016508 68 ALKNEGLIVPGYTH----LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRV-RMNFCPL 120 (388)
Q Consensus 68 A~~~~~~~~~grTh----~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~-~~~~~~l 120 (388)
-++.-+++..-|+. +....||..|..+...+..+...++++.+... .+...|+
T Consensus 40 LE~~lg~~Lf~R~~~g~~~~g~~lT~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (99)
T TIGR00637 40 MNNLSGEPLVERATGGKGGGGAVLTEYGQRLIQLYDLLERILEKAFSVLEDEVVVKPL 97 (99)
T ss_pred HHHHhCCCeEEecCCCCCCCCeeECHHHHHHHHHHHHHHHHHHHHHHHhhceeeeccC
Confidence 34456677666764 67899999999999999999999888876643 3444343
No 67
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=23.89 E-value=2e+02 Score=27.01 Aligned_cols=52 Identities=15% Similarity=0.123 Sum_probs=35.0
Q ss_pred HHHhhhcceeCHHHHHHhccc---C----hhHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 016508 267 SAEFAQNITFNVERIKKALPA---G----YLDATTLADYLVNKQVPFRTSHDIVGKAVA 318 (388)
Q Consensus 267 ~~~~l~~l~vn~~~m~~~l~~---~----~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~ 318 (388)
+..+=.-..++++.+.....- + +.+.+.+++..++.|+++++|.+++.+...
T Consensus 144 ~~~~G~~~~v~E~~~d~~ta~~gsgPA~~~~~~~al~~~~v~~Gl~~~~a~~l~~~~~~ 202 (260)
T PTZ00431 144 FSACGIIQEIKEKDMDIATAISGCGPAYVFLFIESLIDAGVKNGLNRDVSKNLVLQTIL 202 (260)
T ss_pred HHhCCcEEEEChHHcchhhhhcCCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 333333456777766544321 2 244678888888889999999999988864
No 68
>COG2352 Ppc Phosphoenolpyruvate carboxylase [Energy production and conversion]
Probab=23.32 E-value=5.9e+02 Score=28.50 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=25.4
Q ss_pred HhccccccccccCCCCCCCCCCCCCCCCcc-H-HHHHHHH
Q 016508 183 LWASEEFGFITPSDSVSTGSSIMPQKKNPD-P-MELVRGK 220 (388)
Q Consensus 183 l~~s~e~gev~~~~~~~~gSS~MP~K~NP~-~-~E~i~~~ 220 (388)
+++.+|+-||. .+.-||+ |-||+|. . .|-+|+.
T Consensus 707 F~~~TPi~EIs---~LniGSR--PA~Rk~~~~~ie~LRAI 741 (910)
T COG2352 707 FRQATPIQEIS---KLNIGSR--PASRKPTTGGIESLRAI 741 (910)
T ss_pred HHhcCcHHHHh---cCCCCCC--CcCCCCCCCcccccccc
Confidence 67888888874 4567888 9999996 3 7877774
No 69
>PF05924 SAMP: SAMP Motif; InterPro: IPR009224 This short region is found repeated in the mid region of the adenomatous polyposis proteins (APCs). This motif binds axin [].; GO: 0008013 beta-catenin binding, 0016055 Wnt receptor signaling pathway; PDB: 1EMU_B 2RQU_B.
Probab=22.14 E-value=27 Score=19.59 Aligned_cols=9 Identities=33% Similarity=0.774 Sum_probs=2.9
Q ss_pred CCCCCCCCC
Q 016508 202 SSIMPQKKN 210 (388)
Q Consensus 202 SS~MP~K~N 210 (388)
+|.||.|+-
T Consensus 11 ~sAmPk~~~ 19 (20)
T PF05924_consen 11 GSAMPKRRR 19 (20)
T ss_dssp HCTS-----
T ss_pred HHhcccccC
Confidence 578887753
No 70
>PF03861 ANTAR: ANTAR domain; InterPro: IPR005561 ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins []. This domain has been detected in various response regulators of two-component systems, which are structured around two proteins, a histidine kinase and a response regulator. This domain is also found in one-component sensory regulators from a variety of bacteria. Most response regulators interact with DNA, however ANTAR-containing regulators interact with RNA. The majority of the domain consists of a coiled-coil.; PDB: 4AKK_A 1SD5_A 1S8N_A 1QO0_E.
Probab=21.90 E-value=1.8e+02 Score=20.41 Aligned_cols=29 Identities=7% Similarity=0.135 Sum_probs=19.4
Q ss_pred HHcCCChHHHHHHHHHHHHHHHHcCCChHHhh
Q 016508 300 VNKQVPFRTSHDIVGKAVALCVSKECQLQDLS 331 (388)
Q Consensus 300 ~~~gi~~r~Ah~~v~~~~~~a~~~~~~~~~~~ 331 (388)
.+.|++-.+||+.+.+.++ ..+.++.++.
T Consensus 24 ~~~g~~e~~A~~~Lr~~Am---~~~~~l~~vA 52 (56)
T PF03861_consen 24 ARYGLSEDEAYRLLRRQAM---RRRRSLADVA 52 (56)
T ss_dssp HHHT--HHHHHHHHHHHHH---HCTS-HHHHH
T ss_pred HHhCcCHHHHHHHHHHHHH---HcCCCHHHHH
Confidence 3469999999998876664 5788877765
No 71
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=20.54 E-value=2.6e+02 Score=26.58 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=33.3
Q ss_pred ceeCHHHHHHhccc---C----hhHHHHHHHHHHHcCCChHHHHHHHHHHHH
Q 016508 274 ITFNVERIKKALPA---G----YLDATTLADYLVNKQVPFRTSHDIVGKAVA 318 (388)
Q Consensus 274 l~vn~~~m~~~l~~---~----~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~ 318 (388)
+.++++.+.....- + +.+.+.+++..++.|+++.+|++++.+...
T Consensus 158 ~~~~E~~~d~~talsgsgPAf~~~~~eal~~a~v~~Gl~~~~A~~l~~~t~~ 209 (272)
T PRK12491 158 EVVNEKLMDVVTSISGSSPAYVYMFIEAMADAAVLGGMPRKQAYKFAAQAVL 209 (272)
T ss_pred EEEcHHHhhhHHHhccCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 56777777655432 2 344778888888889999999999988764
Done!