BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016511
(388 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 30/298 (10%)
Query: 35 LPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS 94
L + F+L +L+ A+ F NI+ G VYKG + + +AVKR
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 95 R-QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW-ENQP-MKW 151
QF E + + L+ L G C ERLLV +M N +++ L E+QP + W
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 152 AMRVRVALYLAQAL----DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-----N 202
R R+AL A+ L D+C K ++ D+ IL D++ + FGL K +
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
Query: 203 SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI---------PPSHA 253
+ + PEYL TG+ ++ V+ +G +LL+L++G+
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 254 LDLIRG----KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
LD ++G K L+D L+G++ +++ +L+++A C Q P ERP +V L
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 30/298 (10%)
Query: 35 LPGFREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS 94
L + F+L +L+ A+ F NI+ G VYKG + + +AVKR
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNIL---GRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 95 R-QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW-ENQP-MKW 151
QF E + + L+ L G C ERLLV +M N +++ L E+QP + W
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 152 AMRVRVALYLAQAL----DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-----N 202
R R+AL A+ L D+C K ++ D+ IL D++ + FGL K +
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 203 SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI---------PPSHA 253
+ + PEYL TG+ ++ V+ +G +LL+L++G+
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 254 LDLIRG----KNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
LD ++G K L+D L+G++ +++ +L+++A C Q P ERP +V L
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 40/296 (13%)
Query: 38 FREFNLDQLRAATSGFCADNIV---SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD- 93
F F+ +L+ T+ F I ++ GE VVYKG V+ + +AVK+ +A D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKL--AAMVDI 68
Query: 94 -----SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ- 147
+QF +E + + + E LV L+G +G++ LV +MPN +L L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 148 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
P+ W MR ++A A +++ + ++ D+ + IL D+ ++S FGL + S
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 206 ----GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261
A+ PE LR G + P+S +YSFG +LL++++G +P A+D R
Sbjct: 188 QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQ 241
Query: 262 FLMLMDSC-----------LEGHFSNDDGTE---LVRLASRCLQYEPRERPNAKSL 303
L+ + ++ ++ D T + +AS+CL + +RP+ K +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 40/296 (13%)
Query: 38 FREFNLDQLRAATSGFCADNIV---SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD- 93
F F+ +L+ T+ F I ++ GE VVYKG V+ + +AVK+ +A D
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKL--AAMVDI 68
Query: 94 -----SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ- 147
+QF +E + + + E LV L+G +G++ LV +MPN +L L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 148 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
P+ W MR ++A A +++ + ++ D+ + IL D+ ++S FGL + S
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 206 ----GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261
A+ PE LR G + P+S +YSFG +LL++++G +P A+D R
Sbjct: 188 QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQ 241
Query: 262 FLMLMDSC-----------LEGHFSNDDGTE---LVRLASRCLQYEPRERPNAKSL 303
L+ + ++ ++ D T + +AS+CL + +RP+ K +
Sbjct: 242 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 40/296 (13%)
Query: 38 FREFNLDQLRAATSGFCADNIV---SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD- 93
F F+ +L+ T+ F I ++ GE VVYKG V+ + +AVK+ +A D
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKL--AAMVDI 62
Query: 94 -----SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ- 147
+QF +E + + + E LV L+G +G++ LV +MPN +L L +
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 148 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
P+ W MR ++A A +++ + ++ D+ + IL D+ ++S FGL + S
Sbjct: 123 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 206 ----GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261
A+ PE LR G + P+S +YSFG +LL++++G +P A+D R
Sbjct: 182 QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQ 235
Query: 262 FLMLMDSC-----------LEGHFSNDDGTE---LVRLASRCLQYEPRERPNAKSL 303
L+ + ++ ++ D T + +AS+CL + +RP+ K +
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 43 LDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEAR 102
L L AT+ F ++ G VYKG++ + +A+KR + +F E
Sbjct: 31 LVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 103 AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALY 160
+ R LV+LIG C E E +L+ ++M N L +HL+ + M W R+ + +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRD-GKSY-----STNL 213
A+ L Y + RA+ H D+ + IL D++ P+++ FG+ K + G+++ L
Sbjct: 148 AARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 246
+ PEY GR+ +S VYSFG +L ++L +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 43 LDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEAR 102
L L AT+ F ++ G VYKG++ + +A+KR + +F E
Sbjct: 31 LVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 103 AVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE--NQPMKWAMRVRVALY 160
+ R LV+LIG C E E +L+ ++M N L +HL+ + M W R+ + +
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 161 LAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRD------GKSYSTNL 213
A+ L Y + RA+ H D+ + IL D++ P+++ FG+ K + L
Sbjct: 148 AARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 214 AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 246
+ PEY GR+ +S VYSFG +L ++L +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 40/296 (13%)
Query: 38 FREFNLDQLRAATSGFCADNIV---SEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPD- 93
F F+ +L+ T+ F I ++ GE VVYKG V+ + +AVK+ +A D
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKL--AAMVDI 59
Query: 94 -----SRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQ- 147
+QF +E + + E LV L+G +G++ LV + PN +L L +
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 148 PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
P+ W R ++A A +++ + ++ D+ + IL D+ ++S FGL + S
Sbjct: 120 PLSWHXRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 206 ----GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKN 261
A+ PE LR G + P+S +YSFG +LL++++G +P A+D R
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQ 232
Query: 262 FLMLMDSC-----------LEGHFSNDDGTEL---VRLASRCLQYEPRERPNAKSL 303
L+ + ++ ++ D T + +AS+CL + +RP+ K +
Sbjct: 233 LLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 30/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN--LIGCCC 120
G + VYKG D +AVK N +A P +Q VG+LR R VN L
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
+ +V ++ +L HL H + + +A A+ +DY +K ++ DL
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLK 147
Query: 181 TYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ESV 231
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 232 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT-------ELVR 284
VY+FG +L +L++G+ +P S+ N +++ G S D + R
Sbjct: 208 VYAFGIVLYELMTGQ-LPYSNI------NNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260
Query: 285 LASRCLQYEPRERPNAKSLVASLTPLQKE 313
L + CL+ + ERP+ ++A + L +E
Sbjct: 261 LMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 32/270 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A A+ +DY +K ++ DL
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 146
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT-------ELV 283
VY+FG +L +L++G+ +P S+ N +++ G S D +
Sbjct: 207 DVYAFGIVLYELMTGQ-LPYSNI------NNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQKE 313
RL + CL+ + ERP+ ++A + L +E
Sbjct: 260 RLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 32/270 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 21 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A A+ +DY +K ++ DL
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDL 134
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT-------ELV 283
VY+FG +L +L++G+ +P S+ N +++ G S D +
Sbjct: 195 DVYAFGIVLYELMTGQ-LPYSNI------NNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 247
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQKE 313
RL + CL+ + ERP+ ++A + L +E
Sbjct: 248 RLMAECLKKKRDERPSFPRILAEIEELARE 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN--LIGCCC 120
G + VYKG D +AVK N +A P +Q VG+LR R VN L
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
+ +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLK 131
Query: 181 TYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ESV 231
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 232 VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELVR 284
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D + R
Sbjct: 192 VYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RGYLSPDLSKVRSNCPKAMKR 244
Query: 285 LASRCLQYEPRERPNAKSLVASLTPLQK 312
L + CL+ + ERP ++AS+ L +
Sbjct: 245 LMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 22 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 135
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 196 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMK 248
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 249 RLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 130
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 191 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RGYLSPDLSKVRSNCPKAMK 243
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 244 RLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 130
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 191 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RGYLSPDLSKVRSNCPKAMK 243
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 244 RLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 22 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 135
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 196 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMK 248
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 249 RLMAECLKKKRDERPLFPQILASIELLAR 277
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 19 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 132
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 193 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFMVG--RGYLSPDLSKVRSNCPKAMK 245
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 246 RLMAECLKKKRDERPLFPQILASIELLAR 274
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 37 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 150
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 211 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMK 263
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 264 RLMAECLKKKRDERPLFPQILASIELLAR 292
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 44 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 157
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 218 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMK 270
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 271 RLMAECLKKKRDERPLFPQILASIELLAR 299
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 158
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 219 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMK 271
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 272 RLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 32/269 (11%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCC 119
G + VYKG D +AVK N +A P +Q VG+LR R VN++ G
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 120 CEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDL 179
+ + +V ++ +L HL H + + +A AQ +DY +K ++ DL
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 158
Query: 180 NTYRILFDQDGNPRLSCFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVIP---ES 230
+ I +D ++ FGL S + S ++ + PE +R P +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 231 VVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG-------TELV 283
VY+FG +L +L++G+ +P S+ I ++ ++ M G+ S D +
Sbjct: 219 DVYAFGIVLYELMTGQ-LPYSN----INNRDQIIFM--VGRGYLSPDLSKVRSNCPKAMK 271
Query: 284 RLASRCLQYEPRERPNAKSLVASLTPLQK 312
RL + CL+ + ERP ++AS+ L +
Sbjct: 272 RLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ R G + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 265 ------ELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 70 VYKGLVDEDR-WIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
V+ G + D +AVK + PD + +FL+EAR + +V LIG C + + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V E + L E ++ +++ A ++Y SK ++ DL L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ ++S FG+ + DG ++ + +T PE L GR ES V+SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 242 LLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
S P + + L + C + F RL +C YEP +
Sbjct: 308 TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF---------RLMEQCWAYEPGQ 358
Query: 297 RPNAKSLVASLTPLQK 312
RP+ ++ L ++K
Sbjct: 359 RPSFSTIYQELQSIRK 374
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
+ E+M N L +L ++ + + + + +A++Y SK + L+ DL L +
Sbjct: 97 ITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVN 154
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
G ++S FGL + D + S+ + ++PPE L + +S +++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 243 LSGKHIP 249
S +P
Sbjct: 215 YSLGKMP 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 81
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYL----AQALDYCSSKGRALYHDLNTYR 183
+ E+M N L +L + M+ + + L + +A++Y SK + L+ DL
Sbjct: 82 ITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARN 135
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L + G ++S FGL + D + S+ + ++PPE L + +S +++FG L
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 239 LLDLLSGKHIP 249
+ ++ S +P
Sbjct: 196 MWEIYSLGKMP 206
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 265 ------ELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 70 VYKGLVDEDR-WIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
V+ G + D +AVK + PD + +FL+EAR + +V LIG C + + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V E + L E ++ +++ A ++Y SK ++ DL L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ ++S FG+ + DG ++ + +T PE L GR ES V+SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 242 LLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
S P + + L + C + F RL +C YEP +
Sbjct: 308 TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF---------RLMEQCWAYEPGQ 358
Query: 297 RPNAKSLVASLTPLQK 312
RP+ ++ L ++K
Sbjct: 359 RPSFSTIYQELQSIRK 374
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 143 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 261
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 262 ------ELMRM---CWQYNPKMRPSFLEIISSI 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 257
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 258 ------ELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 264 ------ELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 264 ------ELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 174 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 292
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 293 ------ELMRM---CWQYNPKMRPSFLEIISSI 316
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYL----AQALDYCSSKGRALYHDLNTYR 183
+ E+M N L +L + M+ + + L + +A++Y SK + L+ DL
Sbjct: 97 ITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARN 150
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVIPESVVYSFGT 237
L + G ++S FGL + D + Y++++ ++PPE L + +S +++FG
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGV 209
Query: 238 LLLDLLSGKHIP 249
L+ ++ S +P
Sbjct: 210 LMWEIYSLGKMP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 76
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYL----AQALDYCSSKGRALYHDLNTYR 183
+ E+M N L +L + M+ + + L + +A++Y SK + L+ DL
Sbjct: 77 ITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARN 130
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L + G ++S FGL + D + S+ + ++PPE L + +S +++FG L
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 190
Query: 239 LLDLLSGKHIP 249
+ ++ S +P
Sbjct: 191 MWEIYSLGKMP 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 22 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 80
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYL----AQALDYCSSKGRALYHDLNTYR 183
+ E+M N L +L + M+ + + L + +A++Y SK + L+ DL
Sbjct: 81 ITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARN 134
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L + G ++S FGL + D + S+ + ++PPE L + +S +++FG L
Sbjct: 135 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 194
Query: 239 LLDLLSGKHIP 249
+ ++ S +P
Sbjct: 195 MWEIYSLGKMP 205
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRS 109
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYL 161
+V L+G +G+ L+V E M + L +L EN P + +++A +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAF 215
A + Y ++K + ++ DL + D ++ FG+ ++ R G + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCL 270
PE L+ G S ++SFG +L ++ S P L + +L D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
E T+L+R+ C Q+ P+ RP +V
Sbjct: 259 E------RVTDLMRM---CWQFNPKMRPTFLEIV 283
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 271 ------ELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 29 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 87
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYL----AQALDYCSSKGRALYHDLNTYR 183
+ E+M N L +L + M+ + + L + +A++Y SK + L+ DL
Sbjct: 88 ITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARN 141
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L + G ++S FGL + D + S+ + ++PPE L + +S +++FG L
Sbjct: 142 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 201
Query: 239 LLDLLSGKHIP 249
+ ++ S +P
Sbjct: 202 MWEIYSLGKMP 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +A+K + + +F+EEA+ + L E+LV L G C + +
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 81
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYL----AQALDYCSSKGRALYHDLNTYR 183
+ E+M N L +L + M+ + + L + +A++Y SK + L+ DL
Sbjct: 82 ITEYMANGCLLNYL-----REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARN 135
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L + G ++S FGL + D + S+ + ++PPE L + +S +++FG L
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL 195
Query: 239 LLDLLSGKHIP 249
+ ++ S +P
Sbjct: 196 MWEIYSLGKMP 206
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRS 109
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 17 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 76
Query: 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYL 161
+V L+G +G+ L+V E M + L +L EN P + +++A +
Sbjct: 77 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAF 215
A + Y ++K + ++ DL + D ++ FG+ ++ R G + +
Sbjct: 137 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCL 270
PE L+ G S ++SFG +L ++ S P L + +L D+C
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 255
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
E T+L+R+ C Q+ P+ RP +V
Sbjct: 256 E------RVTDLMRM---CWQFNPKMRPTFLEIV 280
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRS 109
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYL 161
+V L+G +G+ L+V E M + L +L EN P + +++A +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAF 215
A + Y ++K + ++ DL + D ++ FG+ ++ + Y + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCL 270
PE L+ G S ++SFG +L ++ S P L + +L D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
E T+L+R+ C Q+ P+ RP +V
Sbjct: 259 E------RVTDLMRM---CWQFNPKMRPTFLEIV 283
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ R G + + PE
Sbjct: 137 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 250
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
D EL+R+ C QY P+ RP+ +++S+
Sbjct: 251 -PDMLLELMRM---CWQYNPKMRPSFLEIISSI 279
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRS 109
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 19 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 78
Query: 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYL 161
+V L+G +G+ L+V E M + L +L EN P + +++A +
Sbjct: 79 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAF 215
A + Y ++K + ++ DL + D ++ FG+ ++ R G + +
Sbjct: 139 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCL 270
PE L+ G S ++SFG +L ++ S P L + +L D+C
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 257
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
E T+L+R+ C Q+ P+ RP +V
Sbjct: 258 E------RVTDLMRM---CWQFNPKMRPTFLEIV 282
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 36/274 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRS 109
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYL 161
+V L+G +G+ L+V E M + L +L EN P + +++A +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAF 215
A + Y ++K + ++ DL + D ++ FG+ ++ + Y + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCL 270
PE L+ G S ++SFG +L ++ S P L + +L D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
E T+L+R+ C Q+ P+ RP +V
Sbjct: 259 E------RVTDLMRM---CWQFNPKMRPTFLEIV 283
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 36/274 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRS 109
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 110 ERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYL 161
+V L+G +G+ L+V E M + L +L EN P + +++A +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKN------SRDGKSYSTNLAF 215
A + Y ++K + ++ DL + D ++ FG+ ++ R G + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCL 270
PE L+ G S ++SFG +L ++ S P L + +L D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
E T+L+R+ C Q+ P RP +V
Sbjct: 259 E------RVTDLMRM---CWQFNPNMRPTFLEIV 283
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + + +A+K P+S FLEEA+ + L+ ++LV L E E +V
Sbjct: 25 VWMGTWNGNTKVAIKTLKPGTMSPES--FLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIV 81
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M +L L E + +K V +A +A + Y + ++ DL + IL
Sbjct: 82 TEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE-RMNYIHRDLRSANILVGN 140
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+++ FGL + +R G + + +T PE GR +S V+SFG LL +
Sbjct: 141 GLICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 242 LLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERP 298
L++ +P G N +++ G+ D L L C + +P ERP
Sbjct: 199 LVTKGRVP-------YPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERP 251
Query: 299 NAKSLVASL 307
+ L + L
Sbjct: 252 TFEYLQSFL 260
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSK 139
+AVK A ++ FL EA + LR LV L+G E + L +V E+M +L
Sbjct: 219 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 276
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L + ++ +L + +A++Y ++ DL +L +D ++S FGL
Sbjct: 277 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGL 335
Query: 200 MKNSRDGKSYST-NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
K + + + +T PE LR + +S V+SFG LL ++ S +P
Sbjct: 336 TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLFHWE----NQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L N P+ + +++A +A +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 142 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 260
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 261 ------ELMRM---CWQYNPKMRPSFLEIISSI 284
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSK 139
+AVK A ++ FL EA + LR LV L+G E + L +V E+M +L
Sbjct: 47 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 104
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L + ++ +L + +A++Y ++ DL +L +D ++S FGL
Sbjct: 105 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGL 163
Query: 200 MKNSRDGKSYST-NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
K + + + +T PE LR + +S V+SFG LL ++ S +P
Sbjct: 164 TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSK 139
+AVK A ++ FL EA + LR LV L+G E + L +V E+M +L
Sbjct: 32 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 89
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L + ++ +L + +A++Y ++ DL +L +D ++S FGL
Sbjct: 90 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGL 148
Query: 200 MKNSRDGKSYST-NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
K + + + +T PE LR + +S V+SFG LL ++ S +P
Sbjct: 149 TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLFHWE----NQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L N P+ + +++A +A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL + +D ++ FG+ ++ + Y + + PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C + F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
EL+R+ C QY P+ RP+ +++S+
Sbjct: 271 ------ELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 36/273 (13%)
Query: 61 EHGEKAPNVVYKGLV-----DE-DRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLV 113
E G+ + +VY+G+ DE + +A+K N +A R +FL EA + +V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 114 NLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPM----KWAMRVRVALYLAQAL 165
L+G +G+ L++ E M L +L EN P+ + +++A +A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 166 DYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPE 219
Y ++ + ++ DL +D ++ FG+ ++ + Y + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHF 274
L+ G S V+SFG +L ++ + P L + L D+C
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 252
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
D EL+R+ C QY P+ RP+ +++S+
Sbjct: 253 -PDMLLELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 368 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 427 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 484
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 485 CPPECPE---------SLHDLMCQCWRKEPEERPTFEYLQAFL 518
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 285 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 344 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 401
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 402 CPPECPES---------LHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSK 139
+AVK A ++ FL EA + LR LV L+G E + L +V E+M +L
Sbjct: 38 VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD 95
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L + ++ +L + +A++Y ++ DL +L +D ++S FGL
Sbjct: 96 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGL 154
Query: 200 MKNSRDGKSYST-NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
K + + + +T PE LR +S V+SFG LL ++ S +P
Sbjct: 155 TKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 285 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 344 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 401
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 402 CPPECPES---------LHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 285 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 344 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 401
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 402 CPPECPES---------LHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 30/265 (11%)
Query: 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNL 115
+V G V+ G + +AVK + S PD+ FL EA + L+ +RLV L
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRL 73
Query: 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRAL 175
+ E ++ E+M N +L L + + +A +A+ + + + +
Sbjct: 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YI 131
Query: 176 YHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIP 228
+ DL IL + +++ FGL + +R+G + + +T PE + G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP--IKWTAPEAINYGTFTI 189
Query: 229 ESVVYSFGTLLLDLLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTEL 282
+S V+SFG LL ++++ IP P +L RG ++ D+C E EL
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------EL 239
Query: 283 VRLASRCLQYEPRERPNAKSLVASL 307
+L C + P +RP L + L
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 37 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 93
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 94 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 152
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 153 TLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 211 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 260
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 261 DRPTFDYLRSVL 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 38 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 94
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 95 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 153
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 154 TLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 211
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 212 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 261
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 262 DRPTFDYLRSVL 273
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 39 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 95
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 96 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 154
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 155 TLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 213 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 262
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 263 DRPTFDYLRSVL 274
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 24 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 80
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 81 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 139
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 140 TLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 197
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 198 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 247
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 248 DRPTFDYLRSVL 259
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 58 IVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSE 110
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 111 RLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYLA 162
+V L+G +G+ L+V E M + L +L EN P + +++A +A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 163 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFT 216
+ Y ++K + ++ +L + D ++ FG+ ++ + Y + +
Sbjct: 142 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 217 PPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLE 271
PE L+ G S ++SFG +L ++ S P L + +L D+C E
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 260
Query: 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
T+L+R+ C Q+ P RP +V
Sbjct: 261 ------RVTDLMRM---CWQFNPNMRPTFLEIV 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 58 IVSEHGEKAPNVVYKGLV------DEDRWIAVKRFNRSAWPDSR-QFLEEARAVGLLRSE 110
++ E G+ + +VY+G + + +AVK N SA R +FL EA +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 111 RLVNLIGCCCEGEERLLVAEFMPNETLSKHLF----HWENQPMK----WAMRVRVALYLA 162
+V L+G +G+ L+V E M + L +L EN P + +++A +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 163 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFT 216
+ Y ++K + ++ +L + D ++ FG+ ++ + Y + +
Sbjct: 141 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 217 PPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLE 271
PE L+ G S ++SFG +L ++ S P L + +L D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 272 GHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
T+L+R+ C Q+ P RP +V
Sbjct: 260 ------RVTDLMRM---CWQFNPNMRPTFLEIV 283
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 92 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 150
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 151 TLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 258
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 259 DRPTFDYLRSVL 270
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 92 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 150
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 151 TLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 258
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 259 DRPTFDYLRSVL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 30 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 86
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 87 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 145
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 146 TLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 204 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 253
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 254 DRPTFDYLRSVL 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 34 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 90
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 91 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 149
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 150 TLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 208 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 257
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 258 DRPTFDYLRSVL 269
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 144
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 252
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 253 DRPTFDYLRSVL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 31 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 87
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 88 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 146
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 147 TLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 205 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 254
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 255 DRPTFDYLRSVL 266
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 144
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 145 TLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 252
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 253 DRPTFDYLRSVL 264
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 112 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 170
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 171 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 228
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 229 CPPECPES---------LHDLMCQCWRKEPEERPTFEYLQAFL 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ DL IL
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSD 144
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 252
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 253 DRPTFDYLRSVL 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 108
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 109 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF 167
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 168 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 225
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 226 CPPECPES---------LHDLMCQCWRKEPEERPTFEYLQAFL 259
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 32/258 (12%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK ++ + F EA + L+ E +V G C EG+ ++V E+M + L+K
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 141 L--------FHWENQP---MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
L E P + + + +A +A + Y +S+ ++ DL T L ++
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGEN 164
Query: 190 GNPRLSCFGLMKNS------RDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
++ FG+ ++ R G + + PPE + + ES V+S G +L ++
Sbjct: 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
Query: 244 S-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
+ GK + + ++ I L +C + E+ L C Q EP R
Sbjct: 225 TYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQ---------EVYELMLGCWQREPHMRK 275
Query: 299 NAKSLVASLTPLQKEAEV 316
N K + L L K + V
Sbjct: 276 NIKGIHTLLQNLAKASPV 293
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 109/247 (44%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 39 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 156
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP----- 249
+ G +++ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 157 R-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
Query: 250 PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
PS +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 216 PSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 266
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 267 MFQESSI 273
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 34/260 (13%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK ++ + F EA + +L+ + +V G C EG L+V E+M + L++
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 141 L-FHWENQ------------PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
L H + P+ + VA +A + Y + ++ DL T L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVG 192
Query: 188 QDGNPRLSCFGLMKN------SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
Q ++ FG+ ++ R G + + PPE + + ES V+SFG +L +
Sbjct: 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252
Query: 242 LLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
+ + GK + + A+D I L +C E+ + C Q EP++
Sbjct: 253 IFTYGKQPWYQLSNTEAIDCITQGRELERPRAC---------PPEVYAIMRGCWQREPQQ 303
Query: 297 RPNAKSLVASLTPLQKEAEV 316
R + K + A L L + V
Sbjct: 304 RHSIKDVHARLQALAQAPPV 323
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 25/248 (10%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 39 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 97
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 156
Query: 201 K-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP---- 249
+ + G + + +T PE L + +S V++FG LL ++ + P
Sbjct: 157 RLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
Query: 250 -PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308
PS +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 215 DPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFE 265
Query: 309 PLQKEAEV 316
+ +E+ +
Sbjct: 266 TMFQESSI 273
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 107/248 (43%), Gaps = 25/248 (10%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 39 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 97
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 98 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 156
Query: 201 K-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP---- 249
+ + G + + +T PE L + +S V++FG LL ++ + P
Sbjct: 157 RLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
Query: 250 -PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308
PS +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 215 DPSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFE 265
Query: 309 PLQKEAEV 316
+ +E+ +
Sbjct: 266 TMFQESSI 273
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 70 VYKGLVDEDRWIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
V+ G + +AVK + S PD+ FL EA + L+ +RLV L + E ++
Sbjct: 25 VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 81
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQ 188
E+M N +L L + + +A +A+ + + + ++ +L IL
Sbjct: 82 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRNLRAANILVSD 140
Query: 189 DGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
+ +++ FGL + +R+G + + +T PE + G +S V+SFG LL +
Sbjct: 141 TLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 198
Query: 242 LLSGKHIP------PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
+++ IP P +L RG ++ D+C E EL +L C + P
Sbjct: 199 IVTHGRIPYPGMTNPEVIQNLERGYR-MVRPDNCPE---------ELYQLMRLCWKERPE 248
Query: 296 ERPNAKSLVASL 307
+RP L + L
Sbjct: 249 DRPTFDYLRSVL 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
++ +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 116 MSAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 174
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 175 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 232
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 233 CPPECPES---------LHDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
++ +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 116 MSAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF 174
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 175 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 232
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + EP ERP + L A L
Sbjct: 233 CPPECPES---------LHDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 286 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF 344
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 345 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 402
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 403 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 436
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 34/260 (13%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK ++ + F EA + +L+ + +V G C EG L+V E+M + L++
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 141 L-FHWENQ------------PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
L H + P+ + VA +A + Y + ++ DL T L
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVG 163
Query: 188 QDGNPRLSCFGLMKN------SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
Q ++ FG+ ++ R G + + PPE + + ES V+SFG +L +
Sbjct: 164 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 223
Query: 242 LLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
+ + GK + + A+D I L +C E+ + C Q EP++
Sbjct: 224 IFTYGKQPWYQLSNTEAIDCITQGRELERPRAC---------PPEVYAIMRGCWQREPQQ 274
Query: 297 RPNAKSLVASLTPLQKEAEV 316
R + K + A L L + V
Sbjct: 275 RHSIKDVHARLQALAQAPPV 294
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 34/260 (13%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK ++ + F EA + +L+ + +V G C EG L+V E+M + L++
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 141 L-FHWENQ------------PMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
L H + P+ + VA +A + Y + ++ DL T L
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVG 169
Query: 188 QDGNPRLSCFGLMKN------SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLD 241
Q ++ FG+ ++ R G + + PPE + + ES V+SFG +L +
Sbjct: 170 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 229
Query: 242 LLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRE 296
+ + GK + + A+D I L +C E+ + C Q EP++
Sbjct: 230 IFTYGKQPWYQLSNTEAIDCITQGRELERPRAC---------PPEVYAIMRGCWQREPQQ 280
Query: 297 RPNAKSLVASLTPLQKEAEV 316
R + K + A L L + V
Sbjct: 281 RHSIKDVHARLQALAQAPPV 300
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 109
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 110 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 168
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 169 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 226
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 227 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 260
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 34/270 (12%)
Query: 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNL 115
V E G +V+ G +++D+ +A+K A + F+EEA + L +LV L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQL 67
Query: 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA-----LDYCSS 170
G C E LV EFM + LS +L R + L+ A+ LD C
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVCEG 115
Query: 171 -----KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEY 220
+ ++ DL L ++ ++S FG+ + D + S+ + + PE
Sbjct: 116 MAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGT 280
R +S V+SFG L+ ++ S IP + + + + + T
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR----SNSEVVEDISTGFRLYKPRLAST 231
Query: 281 ELVRLASRCLQYEPRERPNAKSLVASLTPL 310
+ ++ + C + P +RP L+ L +
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNL 115
V E G +V+ G +++D+ +A+K A + F+EEA + L +LV L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQL 68
Query: 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA-----LDYCSS 170
G C E LV EFM + LS +L R + L+ A+ LD C
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVCEG 116
Query: 171 KGR-----ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEY 220
++ DL L ++ ++S FG+ + D + S+ + + PE
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
R +S V+SFG L+ ++ S IP
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 15/245 (6%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+ +K +++ S F E A + L + LV G C G+E +LV EF+ +L +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSK----GRALYHDLNTYRILFDQDGNP---R 193
L +N + ++ VA LA A+ + G ++ R + GNP +
Sbjct: 103 LKKNKNC-INILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161
Query: 194 LSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSH 252
LS G+ + + PPE + + + + +SFGT L ++ SG P S
Sbjct: 162 LSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS- 220
Query: 253 ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
ALD R F EL L + C+ YEP RP+ ++++ L L
Sbjct: 221 ALDSQRKLQFYED-----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
Query: 313 EAEVP 317
VP
Sbjct: 276 PDLVP 280
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 107
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 108 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 166
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 167 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 224
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 225 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 258
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 46 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 164 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 223 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 273
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 274 MFQESSI 280
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M +L L + ++ V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 46 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 105 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 164 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 223 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 273
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 274 MFQESSI 280
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + +R E+LV L E E +V E+M +L L + ++ V
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 54 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 112
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 113 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 171
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 172 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 230
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 231 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 281
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 282 MFQESSI 288
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCC-CEGEERL-LVAEFMPNETL 137
+AVK P R + +E + L E ++ GCC +GE+ L LV E++P +L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+L + A + A + + + Y S+ ++ +L +L D D ++ F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ-HYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 198 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKH 247
GL K +G Y + + + PE L+ + S V+SFG L +LL+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 248 IPPSHALDLI---RGKNFLMLMDSCLE--GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ L+LI +G+ ++ + LE D E+ L C + E RP
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 301 KSLVASLTPLQKE 313
++L+ L + ++
Sbjct: 282 ENLIPILKTVHEK 294
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 43 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 160
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 161 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 220 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 270
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 271 MFQESSI 277
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 43 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 160
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 161 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 220 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 270
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 271 MFQESSI 277
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 41 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 159 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 268
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 269 MFQESSI 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 41 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 159 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 268
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 269 MFQESSI 275
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 97
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 98 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 155
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 216 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 271
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 272 MRPSFSELVSRISAI 286
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNL 115
V E G +V+ G +++D+ +A+K A + F+EEA + L +LV L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQL 70
Query: 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA-----LDYCSS 170
G C E LV EFM + LS +L R + L+ A+ LD C
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVCEG 118
Query: 171 KGR-----ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEY 220
++ DL L ++ ++S FG+ + D + S+ + + PE
Sbjct: 119 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178
Query: 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
R +S V+SFG L+ ++ S IP
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 224 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 279
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 280 MRPSFSELVSRISAI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 105 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 162
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 223 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 278
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 279 MRPSFSELVSRISAI 293
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 123
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 124 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 181
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 242 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 297
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 298 MRPSFSELVSRISAI 312
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 15/245 (6%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+ +K +++ S F E A + L + LV G C G+E +LV EF+ +L +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSK----GRALYHDLNTYRILFDQDGNP---R 193
L +N + ++ VA LA A+ + G ++ R + GNP +
Sbjct: 103 LKKNKNC-INILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161
Query: 194 LSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSH 252
LS G+ + + PPE + + + + +SFGT L ++ SG P S
Sbjct: 162 LSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS- 220
Query: 253 ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
ALD R F EL L + C+ YEP RP+ ++++ L L
Sbjct: 221 ALDSQRKLQFYED-----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
Query: 313 EAEVP 317
VP
Sbjct: 276 PDLVP 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 41 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 159 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 268
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 269 MFQESSI 275
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 102
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 103 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 160
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 221 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 276
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 277 MRPSFSELVSRISAI 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 104 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 161
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 222 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 277
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 278 MRPSFSELVSRISAI 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 158
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 219 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 274
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 275 MRPSFSELVSRISAI 289
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNL 115
V E G +V+ G +++D+ +A+K A + F+EEA + L +LV L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQL 65
Query: 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA-----LDYCSS 170
G C E LV EFM + LS +L R + L+ A+ LD C
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVCEG 113
Query: 171 KGR-----ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEY 220
++ DL L ++ ++S FG+ + D + S+ + + PE
Sbjct: 114 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 173
Query: 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
R +S V+SFG L+ ++ S IP
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 41 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 99
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 100 LRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 159 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 268
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 269 MFQESSI 275
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 30/209 (14%)
Query: 57 NIVSEHGEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNL 115
V E G +V+ G +++D+ +A+K A + F+EEA + L +LV L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQL 67
Query: 116 IGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA-----LDYCSS 170
G C E LV EFM + LS +L R + L+ A+ LD C
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVCEG 115
Query: 171 KGR-----ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEY 220
++ DL L ++ ++S FG+ + D + S+ + + PE
Sbjct: 116 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 221 LRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
R +S V+SFG L+ ++ S IP
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 106 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 224 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 279
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 280 MRPSFSELVSRISAI 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 20/255 (7%)
Query: 70 VYKG-LVDEDR---WIAVKRFNR-SAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGE- 123
VY G L+D D AVK NR + + QFL E + +++L+G C E
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 124 ERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYR 183
L+V +M + L + + + P + + L +A+ + Y +SK + ++ DL
Sbjct: 125 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASK-KFVHRDLAARN 182
Query: 184 ILFDQDGNPRLSCFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVIPESVVYSF 235
+ D+ +++ FGL ++ D + YS + + + E L+T + +S V+SF
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 236 GTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
G LL +L++ + PP ++ +L+ L+ + D L + +C +
Sbjct: 243 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 298
Query: 296 ERPNAKSLVASLTPL 310
RP+ LV+ ++ +
Sbjct: 299 MRPSFSELVSRISAI 313
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M L L + ++ V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 45 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 103
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 104 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 162
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 163 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 221
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 222 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 272
Query: 310 LQKEA 314
+ +E+
Sbjct: 273 MFQES 277
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL+EA+ + LR E+LV L E E +V E+M L L + ++ V
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+A +A + Y + ++ DL IL ++ +++ FGL + +R G +
Sbjct: 119 MAAQIASGMAYVE-RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLM 264
+ +T PE GR +S V+SFG LL +L + +P LD + +
Sbjct: 178 P--IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 235
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
C E L L +C + +P ERP + L A L
Sbjct: 236 CPPECPES---------LHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 41 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 159 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 268
Query: 310 LQKEA 314
+ +E+
Sbjct: 269 MFQES 273
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCC-CEGEERL-LVAEFMPNETL 137
+AVK P R + +E + L E ++ GCC +GE+ L LV E++P +L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+L + A + A + + + Y ++ ++ +L +L D D ++ F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 198 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKH 247
GL K +G Y + + + PE L+ + S V+SFG L +LL+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 248 IPPSHALDLI---RGKNFLMLMDSCLE--GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ L+LI +G+ ++ + LE D E+ L C + E RP
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 301 KSLVASLTPLQKE 313
++L+ L + ++
Sbjct: 282 ENLIPILKTVHEK 294
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 46 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 164 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 223 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 273
Query: 310 LQKE 313
+ +E
Sbjct: 274 MFQE 277
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
+V + G V+ G + +AVK + + FLEEA + L+ ++LV L
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
+ E ++ EFM +L L E + + + +A+ + Y K ++
Sbjct: 74 AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IH 132
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPE 229
DL +L + +++ FGL + +R+G + + +T PE + G +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIK 190
Query: 230 SVVYSFGTLLLDLLSGKHIP 249
S V+SFG LL ++++ IP
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 23/264 (8%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+++ N P + E + ++ +VN +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QAL++ S + ++ D+ +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS-NQVIHRDIKS 145
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ ++++ G+ PP + +R +L+ + E +RCL+ + +R
Sbjct: 206 MAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 298 PNAKSLV-----------ASLTPL 310
+AK L+ +SLTPL
Sbjct: 263 GSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 43 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 101
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 102 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 160
Query: 201 KNSRDGKSYST------NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + +T PE L + +S V++FG LL ++ + P
Sbjct: 161 R-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 220 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 270
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 271 MFQESSI 277
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 23/230 (10%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 41 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 99
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 100 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 158
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 159 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
S +L+ + + C E + EL+R C Q+ P +RP+
Sbjct: 218 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPS 258
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 42 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 100
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 159
Query: 201 KNSRDGKSYST------NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + +T PE L + +S V++FG LL ++ + P
Sbjct: 160 R-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 219 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 269
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 270 MFQESSI 276
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 46 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 104
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 164 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 223 LSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFET 273
Query: 310 LQKE 313
+ +E
Sbjct: 274 MFQE 277
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 83/208 (39%), Gaps = 28/208 (13%)
Query: 57 NIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
V E G +V+ G +A+K + + F+EEA + L +LV L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLY 88
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA-----LDYCSSK 171
G C E LV EFM + LS +L R + L+ A+ LD C
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYL------------RTQRGLFAAETLLGMCLDVCEGM 136
Query: 172 GR-----ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYL 221
++ DL L ++ ++S FG+ + D + S+ + + PE
Sbjct: 137 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF 196
Query: 222 RTGRVIPESVVYSFGTLLLDLLSGKHIP 249
R +S V+SFG L+ ++ S IP
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 35/257 (13%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + F EA + L+ E +V G C +G+ ++V E+M + L+K
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 141 L--------FHWENQP------MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
L + QP + + + +A +A + Y +S+ ++ DL T L
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLV 166
Query: 187 DQDGNPRLSCFGLMKNS------RDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLL 240
+ ++ FG+ ++ R G + + PPE + + ES V+SFG +L
Sbjct: 167 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILW 226
Query: 241 DLLS-GK----HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
++ + GK + + ++ I L C + E+ + C Q EP+
Sbjct: 227 EIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDVMLGCWQREPQ 277
Query: 296 ERPNAKSLVASLTPLQK 312
+R N K + L L K
Sbjct: 278 QRLNIKEIYKILHALGK 294
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 248 VAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ +L L ++ +++ FGL
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLS 365
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 366 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 425 LSQVYELLEKDYRMERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFET 475
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 476 MFQESSI 482
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 23/247 (9%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 245 VAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ +L L ++ +++ FGL
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLS 362
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP---- 250
+ G +Y+ + + +T PE L + +S V++FG LL ++ + P
Sbjct: 363 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 421
Query: 251 -SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTP 309
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 422 LSQVYELLEKDYRMERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFET 472
Query: 310 LQKEAEV 316
+ +E+ +
Sbjct: 473 MFQESSI 479
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 29/261 (11%)
Query: 73 GLVDEDRW------IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL 126
G V E W +AVK + +FL+EA + ++ LV L+G C
Sbjct: 273 GEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 331
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
++ EFM L +L Q + + + +A ++ A++Y K ++ +L L
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLV 390
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLL 240
++ +++ FGL + G +Y+ + + +T PE L + +S V++FG LL
Sbjct: 391 GENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 449
Query: 241 DLLSGKHIPP-----SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPR 295
++ + P S +L+ + + C E + EL+R C Q+ P
Sbjct: 450 EIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY------ELMRA---CWQWNPS 500
Query: 296 ERPNAKSLVASLTPLQKEAEV 316
+RP+ + + + +E+ +
Sbjct: 501 DRPSFAEIHQAFETMFQESSI 521
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 23/264 (8%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+++ N P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QAL++ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS-NQVIHRDIKS 144
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ ++++ G+ PP + +R +L+ + E +RCL+ + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 261
Query: 298 PNAKSL-----------VASLTPL 310
+AK L ++SLTPL
Sbjct: 262 GSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 112/264 (42%), Gaps = 23/264 (8%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+++ N P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QAL++ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS-NQVIHRDIKS 144
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ ++++ G+ PP + +R +L+ + E +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 298 PNAKSL-----------VASLTPL 310
+AK L ++SLTPL
Sbjct: 262 GSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 112/264 (42%), Gaps = 23/264 (8%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+++ N P + E + ++ +VN +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QAL++ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS-NQVIHRDIKS 144
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ ++++ G+ PP + +R +L+ + E +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 298 PNAKSL-----------VASLTPL 310
+AK L ++SLTPL
Sbjct: 262 GSAKELLQHQFLKIAKPLSSLTPL 285
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 26/260 (10%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCE-GEERL-LVAEFMPNETL 137
+AVK A P R + +E + L E ++ GCC + G L LV E++P +L
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+L + A + A + + + Y ++ ++ DL +L D D ++ F
Sbjct: 123 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDF 178
Query: 198 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKH 247
GL K +G + + + PE L+ + S V+SFG L +LL+
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238
Query: 248 IPPSHALDLI---RGKNFLMLMDSCLE--GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ L+LI +G+ ++ + LE D E+ L C + E RP
Sbjct: 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTF 298
Query: 301 KSLVASLTPLQK--EAEVPS 318
++L+ L + + + + PS
Sbjct: 299 ENLIPILKTVHEKYQGQAPS 318
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 38 FREFNLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQF 97
FR +L G I H E +V K L+ RF+ R F
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELI---------RFDEET---QRTF 54
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRV 157
L+E + + L ++ IG + + + E++ TL + ++Q W+ RV
Sbjct: 55 LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQRVSF 113
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL----------------MK 201
A +A + Y S ++ DLN++ L ++ N ++ FGL +K
Sbjct: 114 AKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 202 NSRDGKSYST--NLAFTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGKHIPPSHALDLIR 258
K Y+ N + PE + GR E V V+SFG +L +++ + P + L R
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDY---LPR 228
Query: 259 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 311
+F + + L+ + + + RC +P +RP+ L L L+
Sbjct: 229 TMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 113/264 (42%), Gaps = 23/264 (8%)
Query: 63 GEKAPNVVYKGL-VDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCE 121
G+ A VY + V + +A+++ N P + E + ++ +VN +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
G+E +V E++ +L+ + + A R L QAL++ S + ++ ++ +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHS-NQVIHRNIKS 145
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG+ +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRER 297
+ ++++ G+ PP + +R +L+ + E +RCL+ + +R
Sbjct: 206 MAIEMIEGE--PPYLNENPLRAL-YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 298 PNAKSLV-----------ASLTPL 310
+AK L+ +SLTPL
Sbjct: 263 GSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 113/254 (44%), Gaps = 23/254 (9%)
Query: 73 GLVDEDRW-----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL 127
G+V +W +AVK + + +F +EA+ + L +LV G C + +
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYI 80
Query: 128 VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFD 187
V E++ N L +L + ++ + + + + + + + S + ++ DL L D
Sbjct: 81 VTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVD 138
Query: 188 QDGNPRLSCFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+D ++S FG+ + D + S+ + ++ PE + +S V++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDS---CLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
S +P DL ++ + H ++D + ++ C P +RP
Sbjct: 199 FSLGKMP----YDLYTNSEVVLKVSQGHRLYRPHLASDT---IYQIMYSCWHELPEKRPT 251
Query: 300 AKSLVASLTPLQKE 313
+ L++S+ PL+++
Sbjct: 252 FQQLLSSIEPLREK 265
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ EF+P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
++L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 105 EYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 283 RDLALRVDQIR 293
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + + PE L + S V+SFG +L +L +
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 280 RDLALRVDQIR 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 106/248 (42%), Gaps = 25/248 (10%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 42 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDY 100
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 101 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 159
Query: 201 K-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP--- 250
+ + G + + +T PE L + +S V++FG LL ++ + P
Sbjct: 160 RLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
Query: 251 --SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 218 DLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFE 268
Query: 309 PLQKEAEV 316
+ +E+ +
Sbjct: 269 TMFQESSI 276
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 29/255 (11%)
Query: 28 ENGSTDALPGFREFNLDQLRAATSGFCA---------------DNIVSEHGEKAPNVVYK 72
ENG + PG R + R + F A DN + + GE + +V
Sbjct: 111 ENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCI 169
Query: 73 GLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131
V + +AVK+ + E + + E +V + G+E +V EF
Sbjct: 170 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229
Query: 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191
+ L+ + H M V L + QAL ++G ++ D+ + IL DG
Sbjct: 230 LEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGR 285
Query: 192 PRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK- 246
+LS FG L TP PE + PE ++S G ++++++ G+
Sbjct: 286 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 345
Query: 247 ---HIPPSHALDLIR 258
+ PP A+ +IR
Sbjct: 346 PYFNEPPLKAMKMIR 360
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 29/255 (11%)
Query: 28 ENGSTDALPGFREFNLDQLRAATSGFCA---------------DNIVSEHGEKAPNVVYK 72
ENG + PG R + R + F A DN + + GE + +V
Sbjct: 34 ENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI-KIGEGSTGIVCI 92
Query: 73 GLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131
V + +AVK+ + E + + E +V + G+E +V EF
Sbjct: 93 ATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152
Query: 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191
+ L+ + H M V L + QAL ++G ++ D+ + IL DG
Sbjct: 153 LEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGR 208
Query: 192 PRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK- 246
+LS FG L TP PE + PE ++S G ++++++ G+
Sbjct: 209 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
Query: 247 ---HIPPSHALDLIR 258
+ PP A+ +IR
Sbjct: 269 PYFNEPPLKAMKMIR 283
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 31/230 (13%)
Query: 107 LRSERLVNLIGCCCE--GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA 164
L E +V G C E G L+ EF+P+ +L ++L +N+ + +++ A+ + +
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKG 126
Query: 165 LDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-------NLAFTP 217
+DY S+ + ++ DL +L + + ++ FGL K K T + +
Sbjct: 127 MDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSG------------KHIPPSHALDLIRGKNFLML 265
PE L + S V+SFG L +LL+ K I P+H + L
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV-----TRL 240
Query: 266 MDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
+++ EG + E+ +L +C +++P R + ++L+ L K
Sbjct: 241 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 290
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 31/230 (13%)
Query: 107 LRSERLVNLIGCCCE--GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQA 164
L E +V G C E G L+ EF+P+ +L ++L +N+ + +++ A+ + +
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKG 138
Query: 165 LDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-------NLAFTP 217
+DY S+ + ++ DL +L + + ++ FGL K K T + +
Sbjct: 139 MDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSG------------KHIPPSHALDLIRGKNFLML 265
PE L + S V+SFG L +LL+ K I P+H + L
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV-----TRL 252
Query: 266 MDSCLEGH---FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
+++ EG + E+ +L +C +++P R + ++L+ L K
Sbjct: 253 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 25/246 (10%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C ++ EFM L +
Sbjct: 46 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L Q + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 105 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 163
Query: 201 K-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPP--- 250
+ + G + + +T PE L + +S V++FG LL ++ + P
Sbjct: 164 RLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
Query: 251 --SHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLT 308
S +L+ + + C E + EL+R C Q+ P +RP+ + +
Sbjct: 222 DLSQVYELLEKDYRMERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFE 272
Query: 309 PLQKEA 314
+ +E+
Sbjct: 273 TMFQES 278
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL EA + L+ ++LV L + E ++ EFM +L L E +
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+ +A+ + + + ++ DL IL +++ FGL + +R+G +
Sbjct: 289 FSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP------PSHALDLIRGKNFL 263
+ +T PE + G +S V+SFG LL+++++ IP P L RG +
Sbjct: 348 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M 404
Query: 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
++C E EL + RC + P ERP + + + L
Sbjct: 405 PRPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 30/255 (11%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 139 KHLFHWENQPMKWAM-RVRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194
+L Q K + +++ Y +Q ++Y +K R ++ +L T IL + + ++
Sbjct: 103 DYL-----QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKI 156
Query: 195 SCFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--- 244
FGL K K Y + + + PE L + S V+SFG +L +L +
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 216
Query: 245 GKHIPPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRE 296
PP+ + +I K M++ +E G DG E+ + + C +
Sbjct: 217 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 276
Query: 297 RPNAKSLVASLTPLQ 311
RP+ + L + ++
Sbjct: 277 RPSFRDLALRVDQIR 291
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 19/228 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKH 140
+AVK + +FL+EA + ++ LV L+G C +V E+MP L +
Sbjct: 60 VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 141 LFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLM 200
L + + + + +A ++ A++Y K ++ DL L ++ +++ FGL
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHVVKVADFGLS 177
Query: 201 KNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL 254
+ G +Y+ + + +T PE L +S V++FG LL ++ ++ +
Sbjct: 178 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI-------ATYGM 229
Query: 255 DLIRGKNFLMLMDSCLEGH-FSNDDGT--ELVRLASRCLQYEPRERPN 299
G + + D +G+ +G ++ L C ++ P +RP+
Sbjct: 230 SPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPS 277
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL EA + L+ ++LV L + E ++ EFM +L L E +
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-------NSRDGKSY 209
+ +A+ + + + ++ DL IL +++ FGL + +R+G +
Sbjct: 116 FSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 210 STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP------PSHALDLIRGKNFL 263
+ +T PE + G +S V+SFG LL+++++ IP P L RG +
Sbjct: 175 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M 231
Query: 264 MLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
++C E EL + RC + P ERP + + + L
Sbjct: 232 PRPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 11/187 (5%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVA 129
V+ G + +AVK + + FLEEA + L+ ++LV L E ++
Sbjct: 29 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT 87
Query: 130 EFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
E+M +L L E + + + +A+ + Y K ++ DL +L +
Sbjct: 88 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 146
Query: 190 GNPRLSCFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDL 242
+++ FGL + +R+G + + +T PE + G +S V+SFG LL ++
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 243 LSGKHIP 249
++ IP
Sbjct: 205 VTYGKIP 211
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 20/233 (8%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWEN--QPMKWAM 153
+FL E + LR +V +G + +V E++ +L + L H + +
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERR 138
Query: 154 RVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R+ +A +A+ ++Y ++ + H DL + +L D+ ++ FGL + S
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 213 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKH----IPPSHALDLIRGKNFLM 264
A TP PE LR +S VYSFG +L +L + + + P+ + + K
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK---- 254
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317
C + ++ + C EP +RP+ +++ L PL K A P
Sbjct: 255 ----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 97 FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVR 156
FL EA + L+ ++LV L + E ++ EFM +L L E +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 157 VALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFT 216
+ +A+ + + + ++ DL IL +++ FGL +R G + + +T
Sbjct: 283 FSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGL---ARVGAKFP--IKWT 336
Query: 217 PPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP------PSHALDLIRGKNFLMLMDSCL 270
PE + G +S V+SFG LL+++++ IP P L RG + ++C
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-MPRPENCP 395
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
E EL + RC + P ERP + + + L
Sbjct: 396 E---------ELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 30/251 (11%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+AVK + D+++ F+ EA + L +V LIG E E ++ E P L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGH 113
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L +N +K V +L + +A+ Y S ++ D+ IL +L FGL
Sbjct: 114 YLERNKNS-LKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGL 171
Query: 200 MKNSRDGKSYSTNLAFTP-----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL 254
+ D Y ++ P PE + R S V+ F + ++LS P
Sbjct: 172 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----- 226
Query: 255 DLIRGKNFLMLMDSCLEGHFSNDDGTE--------LVRLASRCLQYEPRERPNAKSLVAS 306
F L + + G D L L +RC Y+P +RP LV S
Sbjct: 227 -------FFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 279
Query: 307 LTPL-QKEAEV 316
L+ + Q E ++
Sbjct: 280 LSDVYQMEKDI 290
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 30/251 (11%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+AVK + D+++ F+ EA + L +V LIG E E ++ E P L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGH 101
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L +N +K V +L + +A+ Y S ++ D+ IL +L FGL
Sbjct: 102 YLERNKNS-LKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGL 159
Query: 200 MKNSRDGKSYSTNLAFTP-----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL 254
+ D Y ++ P PE + R S V+ F + ++LS P
Sbjct: 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----- 214
Query: 255 DLIRGKNFLMLMDSCLEGHFSNDDGTE--------LVRLASRCLQYEPRERPNAKSLVAS 306
F L + + G D L L +RC Y+P +RP LV S
Sbjct: 215 -------FFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267
Query: 307 LTPL-QKEAEV 316
L+ + Q E ++
Sbjct: 268 LSDVYQMEKDI 278
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 30/251 (11%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+AVK + D+++ F+ EA + L +V LIG E E ++ E P L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGH 97
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
+L +N +K V +L + +A+ Y S ++ D+ IL +L FGL
Sbjct: 98 YLERNKNS-LKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGL 155
Query: 200 MKNSRDGKSYSTNLAFTP-----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHAL 254
+ D Y ++ P PE + R S V+ F + ++LS P
Sbjct: 156 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP----- 210
Query: 255 DLIRGKNFLMLMDSCLEGHFSNDDGTE--------LVRLASRCLQYEPRERPNAKSLVAS 306
F L + + G D L L +RC Y+P +RP LV S
Sbjct: 211 -------FFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 263
Query: 307 LTPL-QKEAEV 316
L+ + Q E ++
Sbjct: 264 LSDVYQMEKDI 274
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 22/253 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 133 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 190
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
Query: 301 KSLVASLTPLQKE 313
+ L + ++ +
Sbjct: 311 RDLALRVDQIRDQ 323
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 109 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 166
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 226
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 227 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 286
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 287 RDLALRVDQIR 297
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 22/253 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 100 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 157
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 217
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 218 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
Query: 301 KSLVASLTPLQKE 313
+ L + ++ +
Sbjct: 278 RDLALRVDQIRDQ 290
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 30/255 (11%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 139 KHLFHWENQPMKWAM-RVRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194
+L Q K + +++ Y +Q ++Y +K R ++ DL T IL + + ++
Sbjct: 102 DYL-----QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKI 155
Query: 195 SCFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--- 244
FGL K K + + + PE L + S V+SFG +L +L +
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
Query: 245 GKHIPPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRE 296
PP+ + +I K M++ +E G DG E+ + + C +
Sbjct: 216 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 275
Query: 297 RPNAKSLVASLTPLQ 311
RP+ + L + ++
Sbjct: 276 RPSFRDLALRVDQIR 290
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 30/255 (11%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 139 KHLFHWENQPMKWAM-RVRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRL 194
+L Q K + +++ Y +Q ++Y +K R ++ DL T IL + + ++
Sbjct: 105 DYL-----QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKI 158
Query: 195 SCFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS--- 244
FGL K K + + + PE L + S V+SFG +L +L +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
Query: 245 GKHIPPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRE 296
PP+ + +I K M++ +E G DG E+ + + C +
Sbjct: 219 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ 278
Query: 297 RPNAKSLVASLTPLQ 311
RP+ + L + ++
Sbjct: 279 RPSFRDLALRVDQIR 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 107 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 164
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 224
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 225 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 284
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 285 RDLALRVDQIR 295
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 108 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 165
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 225
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 226 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 285
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 286 RDLALRVDQIR 296
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 280 RDLALRVDQIR 290
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 101 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 158
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 218
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 219 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 279 RDLALRVDQIR 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 298 RDLALRVDQIR 308
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 20/233 (8%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWEN--QPMKWAM 153
+FL E + LR +V +G + +V E++ +L + L H + +
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERR 138
Query: 154 RVRVALYLAQALDYCSSKGRALYH-DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R+ +A +A+ ++Y ++ + H +L + +L D+ ++ FGL + S +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 213 LAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLM 264
A TP PE LR +S VYSFG +L +L + + ++ P+ + + K
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK---- 254
Query: 265 LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 317
C + ++ + C EP +RP+ +++ L PL K A P
Sbjct: 255 ----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 298 RDLALRVDQIR 308
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 106 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 163
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 223
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 224 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 283
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 284 RDLALRVDQIR 294
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER--LLVAEFMPNETLS 138
+AVK+ S R F E + L+ + +V G C R L+ E++P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+L + + ++ + + ++Y +K R ++ DL T IL + + ++ FG
Sbjct: 105 DYL-QAHAERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 199 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---GKHI 248
L K K + + + PE L + S V+SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 249 PPSHALDLI-RGKNFLMLMDSCLE-----GHFSNDDG--TELVRLASRCLQYEPRERPNA 300
PP+ + +I K M++ +E G DG E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 301 KSLVASLTPLQ 311
+ L + ++
Sbjct: 283 RDLALRVDQIR 293
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN 114
DN + + GE + +V V + +AVK+ + E + + E +V
Sbjct: 27 DNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 115 LIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA 174
+ G+E +V EF+ L+ + H + A V L + QAL ++G
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-V 141
Query: 175 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPES 230
++ D+ + IL DG +LS FG L TP PE + PE
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 231 VVYSFGTLLLDLLSGK----HIPPSHALDLIR 258
++S G ++++++ G+ + PP A+ +IR
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN 114
DN + + GE + +V V + +AVK+ + E + + E +V
Sbjct: 23 DNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 115 LIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA 174
+ G+E +V EF+ L+ + H + A V L + QAL ++G
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-V 137
Query: 175 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPES 230
++ D+ + IL DG +LS FG L TP PE + PE
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 231 VVYSFGTLLLDLLSGK----HIPPSHALDLIR 258
++S G ++++++ G+ + PP A+ +IR
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 56 DNIVSEHGEKAPNVVYKGLV-DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVN 114
DN + + GE + +V V + +AVK+ + E + + E +V
Sbjct: 34 DNFI-KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 115 LIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA 174
+ G+E +V EF+ L+ + H + A V L + QAL ++G
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-V 148
Query: 175 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPES 230
++ D+ + IL DG +LS FG L TP PE + PE
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 231 VVYSFGTLLLDLLSGK----HIPPSHALDLIR 258
++S G ++++++ G+ + PP A+ +IR
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 240
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 79 RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+ +AVK+ + E + + E +V + G+E +V EF+ L+
Sbjct: 55 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 114
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+ H + A V L + QAL ++G ++ D+ + IL DG +LS FG
Sbjct: 115 DIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFG 170
Query: 199 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPP 250
L TP PE + PE ++S G ++++++ G+ + PP
Sbjct: 171 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 230
Query: 251 SHALDLIR 258
A+ +IR
Sbjct: 231 LKAMKMIR 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 100/252 (39%), Gaps = 44/252 (17%)
Query: 81 IAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL-- 137
+AVK +A P R L E + + ++ L G C + LL+ E+ +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 138 --------------------SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
S L H + + + + A ++Q + Y + + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHR 174
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV 231
DL IL + ++S FGL ++ + SY + + E L +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 232 VYSFGTLLLDL--LSGK---HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
V+SFG LL ++ L G IPP +L++ + + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 287 SRCLQYEPRERP 298
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G A++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN-- 212
+ L +A+ ++Y + + + ++ DL + D+ +++ FGL ++ D + YS
Sbjct: 127 ISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH 185
Query: 213 ------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266
+ +T E L+T R +S V+SFG LL +LL+ + PP +D +FL
Sbjct: 186 RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQG 244
Query: 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
+ + D L ++ +C + +P RP + LV +
Sbjct: 245 RRLPQPEYCPD---SLYQVMQQCWEADPAVRPTFRVLVGEV 282
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS- 210
V YLA+ ALD+ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 211 -TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 245
+ + PE + + +SFG L+ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS- 210
V YLA+ ALD+ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 129 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 211 -TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 245
+ + PE + + +SFG L+ ++L+G
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 44/269 (16%)
Query: 81 IAVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMP----NE 135
+AVK A D + F EA + + +V L+G C G+ L+ E+M NE
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 136 ---TLSKH----LFHWE-----------NQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
++S H L H + P+ A ++ +A +A + Y S + + ++
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHR 198
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV 231
DL T L ++ +++ FGL +N Y + + + PPE + R ES
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 258
Query: 232 VYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
V+++G +L ++ S P + +R N L ++C EL L
Sbjct: 259 VWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC---------PLELYNLM 309
Query: 287 SRCLQYEPRERPNAKSLVASLTPLQKEAE 315
C P +RP+ S+ L + + AE
Sbjct: 310 RLCWSKLPADRPSFCSIHRILQRMCERAE 338
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS- 210
V YLA+ ALD+ S G +Y DL IL D++G+ +L+ FGL K S D K+YS
Sbjct: 128 VKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 211 -TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 245
+ + PE + + +SFG L+ ++L+G
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 25/229 (10%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +V+L G G+ ++V EFM N L L + Q
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQL 147
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS--YSTN 212
V + +A + Y + G ++ DL IL + + ++S FGL + D Y+T
Sbjct: 148 VGMLRGIAAGMRYLADMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT 206
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP--PSHALDLIR----GKN 261
+ +T PE ++ + S V+S+G ++ +++S P D+I+ G
Sbjct: 207 GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYR 266
Query: 262 FLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
MD C G L +L C Q E ERP + +V L +
Sbjct: 267 LPAPMD-CPAG---------LHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + L + +V IG + R ++ E M L L +QP
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 151 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 265
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 266 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 147
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 148 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 262
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 263 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 120
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 121 VGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 235
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + L + +V IG + R ++ E M L L +QP
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 137 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 195
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 251
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 252 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLL-VAEFMPNETLSKHLFHWENQPMKWAMRVR 156
+ E R + L R+ + + CC + +RL V EF+ L +FH + R R
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARAR 127
Query: 157 V-ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK----NSRDGKSYST 211
A + AL + KG +Y DL +L D +G+ +L+ FG+ K N ++
Sbjct: 128 FYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 212 NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP 249
+ PE L+ P ++ G LL ++L G H P
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-HAP 223
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 137
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 138 VGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 252
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 253 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E+M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 139 KHLFHWENQPMKWAMR--------------VRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L E ++++ V A +A+ ++Y +SK + ++ DL +
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 181
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 242 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 293 PSQRPTFKQLVEDL 306
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCC 120
GE VVYK + R +A+KR A + + E + L +V+LI
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALY-LAQALDYCSSKGRALYHDL 179
LV EFM + L K L EN+ ++++ LY L + + +C + R L+ DL
Sbjct: 90 SERCLTLVFEFMEKD-LKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCH-QHRILHRDL 145
Query: 180 NTYRILFDQDGNPRLSCFGLMKN-SRDGKSYS---TNLAFTPPEYLRTGRVIPESV-VYS 234
+L + DG +L+ FGL + +SY+ L + P+ L + SV ++S
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 235 FGTLLLDLLSGKHIPP 250
G + ++++GK + P
Sbjct: 206 IGCIFAEMITGKPLFP 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
+ + LDY S+ R ++ D+ +L + G+ +L+ FG+ D + TP
Sbjct: 125 ILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 218 -PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS--CLEGHF 274
PE ++ ++ ++S G ++L G+ PP+ L +R FL+ +S LEG
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGE--PPNSDLHPMR-VLFLIPKNSPPTLEGQH 240
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLV 304
S CL +PR RP AK L+
Sbjct: 241 SK----PFKEFVEACLNKDPRFRPTAKELL 266
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 63 GEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCC 120
GE VVYK + R +A+KR A + + E + L +V+LI
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 121 EGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALY-LAQALDYCSSKGRALYHDL 179
LV EFM + L K L EN+ ++++ LY L + + +C + R L+ DL
Sbjct: 90 SERCLTLVFEFMEKD-LKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCH-QHRILHRDL 145
Query: 180 NTYRILFDQDGNPRLSCFGLMKN-SRDGKSYS---TNLAFTPPEYLRTGRVIPESV-VYS 234
+L + DG +L+ FGL + +SY+ L + P+ L + SV ++S
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 235 FGTLLLDLLSGKHIPP 250
G + ++++GK + P
Sbjct: 206 IGCIFAEMITGKPLFP 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 181
Query: 185 LFDQDGNPRLSCFGLMKNSR--DGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ D +TN + + PE L +S V+SFG L
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 242 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 293 PSQRPTFKQLVEDL 306
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 21/239 (8%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 150
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 151 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 265
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+ L + S + + R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 266 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 323
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 135
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 136 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 250
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 251 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 100 EARAVGLLRSERLVNLIGCCCEGEERLL-VAEFMPNETLSKHLFHWENQPMKWAMRVRVA 158
E R + L + + C + +E L V E++ L H+ Q R
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRAT 122
Query: 159 LYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
Y A+ L + SKG +Y DL IL D+DG+ +++ FG+ K + G + +
Sbjct: 123 FYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG 181
Query: 216 TP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255
TP PE L + +SFG LL ++L G+ P H D
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 21/239 (8%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 127
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 128 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 186
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 187 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 242
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+ L + S + + R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 243 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 135
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 136 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 194
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 195 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 250
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 251 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 151 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 209
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 210 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 265
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 266 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 28/257 (10%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRS---ERLVNLIGCC-CEGEERL-LVAEFMPNE 135
+AVK P R + R + +LR+ E +V GCC +GE+ + LV E++P
Sbjct: 40 VAVKALKEGCGPQLRSGWQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 97
Query: 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+L +L + A + A + + + Y ++ ++ L +L D D ++
Sbjct: 98 SLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIG 153
Query: 196 CFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---G 245
FGL K +G Y + + + PE L+ + S V+SFG L +LL+
Sbjct: 154 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDS 213
Query: 246 KHIPPSHALDLI---RGKNFLMLMDSCLE--GHFSNDDG--TELVRLASRCLQYEPRERP 298
P + +LI +G+ ++ + LE D E+ L C + E RP
Sbjct: 214 NQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRP 273
Query: 299 NAKSLVASLTPLQKEAE 315
++LV L Q++ +
Sbjct: 274 TFQNLVPILQTAQEKYQ 290
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 28/257 (10%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRS---ERLVNLIGCC-CEGEERL-LVAEFMPNE 135
+AVK P R + R + +LR+ E +V GCC +GE+ + LV E++P
Sbjct: 41 VAVKALKEGCGPQLRSGWQ--REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLG 98
Query: 136 TLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+L +L + A + A + + + Y ++ ++ L +L D D ++
Sbjct: 99 SLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIG 154
Query: 196 CFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS---G 245
FGL K +G Y + + + PE L+ + S V+SFG L +LL+
Sbjct: 155 DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDS 214
Query: 246 KHIPPSHALDLI---RGKNFLMLMDSCLE--GHFSNDDG--TELVRLASRCLQYEPRERP 298
P + +LI +G+ ++ + LE D E+ L C + E RP
Sbjct: 215 NQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRP 274
Query: 299 NAKSLVASLTPLQKEAE 315
++LV L Q++ +
Sbjct: 275 TFQNLVPILQTAQEKYQ 291
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 137 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 195
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 251
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 252 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 173
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 174 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 233
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 234 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 284
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 285 PSQRPTFKQLVEDL 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 222
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 282
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 283 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 333
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 334 PSQRPTFKQLVEDL 347
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 142
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 143 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 201
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 202 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 257
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 258 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 298
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 153
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 154 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 212
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 213 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 268
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 269 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 174
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 175 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 234
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 235 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 285
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 286 PSQRPTFKQLVEDL 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 170
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 171 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 230
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 231 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 281
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 282 PSQRPTFKQLVEDL 295
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 181
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 242 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 293 PSQRPTFKQLVEDL 306
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 181
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 242 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 292
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 293 PSQRPTFKQLVEDL 306
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 100 EARAVGLLRSERLVNLIGCCCEGEERLL-VAEFMPNETLSKHLFHWENQPMKWAMRVRVA 158
E R + L + + C + +E L V E++ L H+ Q R
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-----QSCHKFDLSRAT 121
Query: 159 LYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
Y A+ L + SKG +Y DL IL D+DG+ +++ FG+ K + G + +
Sbjct: 122 FYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG 180
Query: 216 TP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD 255
TP PE L + +SFG LL ++L G+ P H D
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 176
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 177 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 236 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 291
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 292 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 37/254 (14%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLL-RSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK A D + E + ++ + + ++NL+G C + ++ E+ L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 139 KHL--------------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRI 184
++L H + + V A +A+ ++Y +SK + ++ DL +
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNV 166
Query: 185 LFDQDGNPRLSCFGLMKNSRDGKSY--STN----LAFTPPEYLRTGRVIPESVVYSFGTL 238
L +D +++ FGL ++ Y +TN + + PE L +S V+SFG L
Sbjct: 167 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 226
Query: 239 LLDL--LSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYE 293
L ++ L G P +L F +L EGH + EL + C
Sbjct: 227 LWEIFTLGGSPYPGVPVEEL-----FKLLK----EGHRMDKPSNCTNELYMMMRDCWHAV 277
Query: 294 PRERPNAKSLVASL 307
P +RP K LV L
Sbjct: 278 PSQRPTFKQLVEDL 291
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 152
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 153 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 211
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 212 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 267
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 268 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 308
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E M N +L L + Q
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQL 120
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 121 VGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 235
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 13/223 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G + + ++V E M N +L L + Q
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQL 149
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + +A + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 150 VGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD 267
+ +T PE + + S V+S+G +L +++S P + ++ + +D
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE----MSNQDVIKAVD 264
Query: 268 SCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L +L C Q + RP + +V+ L L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 162
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD-- 205
AM + VA +A Y + ++ D+ L G R++ G +RD
Sbjct: 163 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 221
Query: 206 -------GKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 222 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 277
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 278 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 318
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ R++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
+ + LDY S+ + ++ D+ +L + G +L+ FG+ D + TP
Sbjct: 113 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 171
Query: 218 -PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEG 272
PE ++ ++ ++S G ++L G+ + P L LI N LEG
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEG 226
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
++S L CL EP RP AK L+
Sbjct: 227 NYSKP----LKEFVEACLNKEPSFRPTAKELL 254
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 25/276 (9%)
Query: 55 ADNIV---SEHGEKAPNVVYKG-LVDEDRWIAVKRF-------NRSAWPDSRQFLEEARA 103
ADN + + G+ +V+KG LV + +A+K ++F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 104 VGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ 163
+ L +V L G +V EF+P L L + P+KW++++R+ L +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIAL 133
Query: 164 ALDYCSSKGRALYH-DLNTYRILFDQ-DGN----PRLSCFGLMKNSRDGKS-YSTNLAFT 216
++Y ++ + H DL + I D N +++ FGL + S S N +
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWM 193
Query: 217 PPEYL--RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274
PE + ++ YSF +L +L+G+ ++ I+ N M+ + L
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEGLRPTI 251
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L + C +P++RP+ +V L+ L
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
+ + LDY S+ + ++ D+ +L + G +L+ FG+ D + TP
Sbjct: 133 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 191
Query: 218 -PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEG 272
PE ++ ++ ++S G ++L G+ + P L LI N LEG
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEG 246
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
++S L CL EP RP AK L+
Sbjct: 247 NYSK----PLKEFVEACLNKEPSFRPTAKELL 274
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 63 GEKAPNVVYKGL-VDEDRWI----AVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLI 116
G A VYKG+ V E + A+K N + P + +F++EA + + LV L+
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
G C + LV + MP+ L +++ H + + + + +A+ + Y + R ++
Sbjct: 84 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 140
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAFTPPEYL-----RTGRVIPES 230
DL +L + +++ FGL + D K Y+ + P +++ + +S
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 200
Query: 231 VVYSFGTLLLDLLS--GK---HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285
V+S+G + +L++ GK IP DL+ L C ++ +
Sbjct: 201 DVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPIC---------TIDVYMV 251
Query: 286 ASRCLQYEPRERPNAKSLVASLTPLQKEAE 315
+C + RP K L A + + ++ +
Sbjct: 252 MVKCWMIDADSRPKFKELAAEFSRMARDPQ 281
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 63 GEKAPNVVYKGL-VDEDRWI----AVKRFNRSAWPDSR-QFLEEARAVGLLRSERLVNLI 116
G A VYKG+ V E + A+K N + P + +F++EA + + LV L+
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
G C + LV + MP+ L +++ H + + + + +A+ + Y + R ++
Sbjct: 107 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 163
Query: 177 HDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAFTPPEYL-----RTGRVIPES 230
DL +L + +++ FGL + D K Y+ + P +++ + +S
Sbjct: 164 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 223
Query: 231 VVYSFGTLLLDLLS--GK---HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRL 285
V+S+G + +L++ GK IP DL+ L C ++ +
Sbjct: 224 DVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICT---------IDVYMV 274
Query: 286 ASRCLQYEPRERPNAKSLVASLTPLQKEAE 315
+C + RP K L A + + ++ +
Sbjct: 275 MVKCWMIDADSRPKFKELAAEFSRMARDPQ 304
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 78 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 255 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 21/222 (9%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWE---NQPM 149
D FL EA + + +V IG + R ++ E M L L +QP
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 150 KWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSC---FGLMKN-- 202
AM + VA +A Y + ++ D+ L G R++ FG+ ++
Sbjct: 137 SLAMLDLLHVARDIACGCQYLE-ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY 195
Query: 203 ----SRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLI 257
R G + + PPE G ++ +SFG LL ++ S ++P PS +
Sbjct: 196 RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS---- 251
Query: 258 RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPN 299
+ L + S + + R+ ++C Q++P +RPN
Sbjct: 252 -NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
+ + LDY S+ + ++ D+ +L + G +L+ FG+ D + TP
Sbjct: 113 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 171
Query: 218 -PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEG 272
PE ++ ++ ++S G ++L G+ + P L LI N LEG
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEG 226
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
++S L CL EP RP AK L+
Sbjct: 227 NYSKP----LKEFVEACLNKEPSFRPTAKELL 254
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
+ + LDY S+ + ++ D+ +L + G +L+ FG+ D + TP
Sbjct: 128 ILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 186
Query: 218 -PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDSCLEG 272
PE ++ ++ ++S G ++L G+ + P L LI N LEG
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEG 241
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
++S L CL EP RP AK L+
Sbjct: 242 NYSK----PLKEFVEACLNKEPSFRPTAKELL 269
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 41/264 (15%)
Query: 76 DEDRWIAVKRFNRSAWPDSRQF----LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEF 131
D R +A+K+F S D + + E + + LR E LVNL+ C + + LV EF
Sbjct: 48 DTGRIVAIKKFLES--DDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105
Query: 132 MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGN 191
+ + T+ L + N + + + + + + +C S ++ D+ IL Q G
Sbjct: 106 V-DHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGV 162
Query: 192 PRLSCFGLMKN-SRDGKSYSTNLA---FTPPEYLRTGRVIPESV-VYSFGTLLLDLLSGK 246
+L FG + + G+ Y +A + PE L ++V V++ G L+ ++ G+
Sbjct: 163 VKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 247 HIPPSHALDLIRGKNFLMLMDSCLEGH---FSND---DGTEL------------------ 282
+ P + D+ + + +M + + + H F+ + G L
Sbjct: 223 PLFPGDS-DIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSE 281
Query: 283 --VRLASRCLQYEPRERPNAKSLV 304
+ LA +CL +P +RP L+
Sbjct: 282 VVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 99/252 (39%), Gaps = 44/252 (17%)
Query: 81 IAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL-- 137
+AVK +A P R L E + + ++ L G C + LL+ E+ +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 138 --------------------SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
S L H + + + + A ++Q + Y + + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHR 174
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV 231
DL IL + ++S FGL ++ + S + + E L +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 232 VYSFGTLLLDL--LSGK---HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
V+SFG LL ++ L G IPP +L++ + + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 287 SRCLQYEPRERP 298
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 80 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 257 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 83 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 260 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL-----------FHWEN 146
+E + +G + + ++NL+G C + ++ E+ L ++L +
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 147 QP---MKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
P M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 91 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
L F +L EGH + EL + C P +RP K LV L
Sbjct: 268 L-----FKLLK----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G G ++V E+M N +L L + Q
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQL 153
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYSTN 212
V + + + Y S G ++ DL +L D + ++S FGL + D +Y+T
Sbjct: 154 VGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ +T PE + S V+SFG ++ ++L+
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHL---------FHWE--- 145
+E + +G + + ++NL+G C + ++ E+ L ++L + ++
Sbjct: 137 MEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 146 --NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-- 201
+ M + V LA+ ++Y +S+ + ++ DL +L ++ +++ FGL +
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 202 NSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLLDL--LSGKHIPPSHALD 255
N+ D +TN + + PE L +S V+SFG L+ ++ L G P
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP------ 307
Query: 256 LIRGKNFLMLMDSCLEGHFSNDDG---TELVRLASRCLQYEPRERPNAKSLVASL 307
G L EGH + EL + C P +RP K LV L
Sbjct: 308 ---GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 38/264 (14%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLE----EARAVGLLRSERLVNLIGCCCEGEER 125
VY+ D +AVK D Q +E EA+ +L+ ++ L G C +
Sbjct: 23 VYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81
Query: 126 LLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRA--LYHDLNTYR 183
LV EF L++ L P + V A+ +A+ ++Y + ++ DL +
Sbjct: 82 CLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 184 ILFDQ---DGNP-----RLSCFGLMKN-SRDGK-SYSTNLAFTPPEYLRTGRVIPESVVY 233
IL Q +G+ +++ FGL + R K S + A+ PE +R S V+
Sbjct: 139 ILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVW 198
Query: 234 SFGTLLLDLLSGKHIPPSHALD-------LIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
S+G LL +LL+G+ P +D + K L + +C E +L
Sbjct: 199 SYGVLLWELLTGE--VPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAKLM 247
Query: 287 SRCLQYEPRERPNAKSLVASLTPL 310
C +P RP+ +++ LT +
Sbjct: 248 EDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLI 114
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L P ++ + + +++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 229
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+ L L ++C Y+P RP L A L+ + +E ++
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 44/252 (17%)
Query: 81 IAVKRFNRSAWPDS-RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL-- 137
+AVK +A P R L E + + ++ L G C + LL+ E+ +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 138 --------------------SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYH 177
S L H + + + + A ++Q + Y + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS-LVHR 174
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV 231
DL IL + ++S FGL ++ + S + + E L +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 232 VYSFGTLLLDL--LSGK---HIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLA 286
V+SFG LL ++ L G IPP +L++ + + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 287 SRCLQYEPRERP 298
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +++L G + +++ EFM N +L L + Q
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 137
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS---YST 211
V + +A + Y + ++ DL IL + + ++S FGL + D S Y++
Sbjct: 138 VGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 196
Query: 212 NLA------FTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
L +T PE ++ + S V+S+G ++ +++S
Sbjct: 197 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 62 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLI 119
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 120 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L H + K F + ++ +
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGV-----KPFQGVKNNDV 226
Query: 271 EGHFSNDDGT--------ELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
G N + L L ++C Y+P RP L A L+ + +E
Sbjct: 227 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 12/223 (5%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLI 142
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 143 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L P ++ + + +++
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 257
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ L L ++C Y+P RP L A L+ + +E
Sbjct: 258 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 300
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLI 114
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L P ++ + + +++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 229
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+ L L ++C Y+P RP L A L+ + +E ++
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +++L G + + ++V E+M N +L L + Q
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQL 126
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + ++ + Y S G ++ DL IL + + ++S FGL + D +Y+T
Sbjct: 127 VGMLRGISAGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ +T PE + + S V+S+G ++ +++S
Sbjct: 186 GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 12/223 (5%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 60 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLI 117
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 118 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L P ++ + + +++
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 232
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ L L ++C Y+P RP L A L+ + +E
Sbjct: 233 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 275
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 12/223 (5%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 59 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLI 116
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 117 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L P ++ + + +++
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 231
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ L L ++C Y+P RP L A L+ + +E
Sbjct: 232 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 274
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 31/253 (12%)
Query: 79 RWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+ +AVK+ + E + + +V++ G+E +V EF+ L+
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 139 KHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG 198
+ H + A V L + +AL Y ++G ++ D+ + IL DG +LS FG
Sbjct: 131 DIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFG 186
Query: 199 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPP 250
L TP PE + E ++S G ++++++ G+ + PP
Sbjct: 187 FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 246
Query: 251 SHALDLIRGK-----NFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVA 305
A+ IR L + S L G LVR EP +R A+ L+
Sbjct: 247 LQAMRRIRDSLPPRVKDLHKVSSVLRGFLD----LMLVR--------EPSQRATAQELLG 294
Query: 306 SLTPLQKEAEVPS 318
P K A PS
Sbjct: 295 H--PFLKLAGPPS 305
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 12/223 (5%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 54 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKYSLDLASLI 111
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 112 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L P ++ + + +++
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 226
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ L L ++C Y+P RP L A L+ + +E
Sbjct: 227 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEG 272
PE L GR + + G ++ +++ G+ P + D K F L+LM+ E
Sbjct: 317 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EI 366
Query: 273 HFSNDDGTELVRLASRCLQYEPRER 297
F G E L S L+ +P++R
Sbjct: 367 RFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEG 272
PE L GR + + G ++ +++ G+ P + D K F L+LM+ E
Sbjct: 320 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EI 369
Query: 273 HFSNDDGTELVRLASRCLQYEPRER 297
F G E L S L+ +P++R
Sbjct: 370 RFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G ++ L G G ++V E+M N +L L + Q
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQL 153
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL---MKNSRDGKSYST 211
V + + + Y S G ++ DL +L D + ++S FGL +++ D +T
Sbjct: 154 VGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
Query: 212 N----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ +T PE + S V+SFG ++ ++L+
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 25/276 (9%)
Query: 55 ADNIV---SEHGEKAPNVVYKG-LVDEDRWIAVKRF-------NRSAWPDSRQFLEEARA 103
ADN + + G+ +V+KG LV + +A+K ++F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 104 VGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ 163
+ L +V L G +V EF+P L L + P+KW++++R+ L +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIAL 133
Query: 164 ALDYCSSKGRALYH-DLNTYRILFDQ-DGN----PRLSCFGLMKNSRDGKS-YSTNLAFT 216
++Y ++ + H DL + I D N +++ FG + S S N +
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWM 193
Query: 217 PPEYL--RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274
PE + ++ YSF +L +L+G+ ++ I+ N M+ + L
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEGLRPTI 251
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L + C +P++RP+ +V L+ L
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 81 IAVKRFNRSAW-PDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSK 139
+A+K +++ D + E A+ LR + + L + +V E+ P L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
++ +++ + RV V + A+ Y S+G A + DL +LFD+ +L FGL
Sbjct: 98 YIIS-QDRLSEEETRV-VFRQIVSAVAYVHSQGYA-HRDLKPENLLFDEYHKLKLIDFGL 154
Query: 200 MKNSRDGKSYST-----NLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHA 253
+ K Y +LA+ PE ++ + E+ V+S G LL L+ G +P
Sbjct: 155 CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG-FLP---- 209
Query: 254 LDLIRGKNFLMLMDSCLEGHFSNDD--GTELVRLASRCLQYEPRERPNAKSLV 304
N + L + G + + L + LQ +P++R + K+L+
Sbjct: 210 ---FDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 25/276 (9%)
Query: 55 ADNIV---SEHGEKAPNVVYKG-LVDEDRWIAVKRF-------NRSAWPDSRQFLEEARA 103
ADN + + G+ +V+KG LV + +A+K ++F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 104 VGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQ 163
+ L +V L G +V EF+P L L + P+KW++++R+ L +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIAL 133
Query: 164 ALDYCSSKGRALYH-DLNTYRILFDQ-DGN----PRLSCFGLMKNSRDGKS-YSTNLAFT 216
++Y ++ + H DL + I D N +++ F L + S S N +
Sbjct: 134 GIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWM 193
Query: 217 PPEYL--RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHF 274
PE + ++ YSF +L +L+G+ ++ I+ N M+ + L
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN--MIREEGLRPTI 251
Query: 275 SNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
D L + C +P++RP+ +V L+ L
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 15/173 (8%)
Query: 83 VKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSKHL 141
+ +F DS F EE + S +V L C + ++ L +V E+MP L +
Sbjct: 108 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLM 166
Query: 142 FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-M 200
+++ P KWA + LA LD S G ++ D+ +L D+ G+ +L+ FG M
Sbjct: 167 SNYD-VPEKWAKFYTAEVVLA--LDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCM 222
Query: 201 KNSRDGKSYSTNLAFTP----PEYLRT----GRVIPESVVYSFGTLLLDLLSG 245
K G + TP PE L++ G E +S G L ++L G
Sbjct: 223 KMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 90/234 (38%), Gaps = 28/234 (11%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKFSLDLASLI 494
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
A L+ AL Y SK R ++ D+ +L + +L FGL + D Y +
Sbjct: 495 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 216 TP-----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
P PE + R S V+ FG + ++L H + K F + ++ +
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGV-----KPFQGVKNNDV 601
Query: 271 EGHFSNDDGT--------ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
G N + L L ++C Y+P RP L A L+ + +E ++
Sbjct: 602 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD--GKSYS- 210
V YLA+ LD+ S G +Y DL IL D++G+ +L+ FGL K + D K+YS
Sbjct: 132 VKFYLAELALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 211 -TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG 245
+ + PE + + +S+G L+ ++L+G
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 10/148 (6%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP--- 217
+ + LDY S+ + ++ D+ +L + G+ +L+ FG+ D + TP
Sbjct: 129 ILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 218 -PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN 276
PE ++ ++ ++S G ++L G+ PP+ + +R L L+
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGE--PPNSDMHPMR---VLFLIPKNNPPTLVG 242
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSLV 304
D CL +P RP AK L+
Sbjct: 243 DFTKSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 70 VYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEARA--VGLLRSERLVNLI----GCCCEGE 123
VYKG +DE R +AVK F ++ + + F+ E V L+ + + I +G
Sbjct: 29 VYKGSLDE-RPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84
Query: 124 -ERLLVAEFMPNETLSKHL-FHWENQPMKWAMRVRVALYLAQALDYCSS--------KGR 173
E LLV E+ PN +L K+L H + W R+A + + L Y + K
Sbjct: 85 MEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLHTELPRGDHYKPA 140
Query: 174 ALYHDLNTYRILFDQDGNPRLSCFGL 199
+ DLN+ +L DG +S FGL
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 83 VKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF 142
+ +F DS F EE + S +V L + +V E+MP L +
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 166
Query: 143 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-MK 201
+++ P KWA + LA LD S G ++ D+ +L D+ G+ +L+ FG MK
Sbjct: 167 NYD-VPEKWARFYTAEVVLA--LDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 202 NSRDGKSYSTNLAFTP----PEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253
+++G TP PE L++ G E +S G L ++L G P +A
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD--TPFYA 280
Query: 254 LDLI 257
L+
Sbjct: 281 DSLV 284
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 12/226 (5%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKFSLDLASLI 114
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN--- 212
A L+ AL Y SK R ++ D+ +L +L FGL + D Y +
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 213 --LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
+ + PE + R S V+ FG + ++L P ++ + + +++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 229
Query: 271 EGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
+ L L ++C Y+P RP L A L+ + +E ++
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 83 VKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF 142
+ +F DS F EE + S +V L + +V E+MP L +
Sbjct: 102 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 161
Query: 143 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-MK 201
+++ P KWA + LA LD S G ++ D+ +L D+ G+ +L+ FG MK
Sbjct: 162 NYD-VPEKWARFYTAEVVLA--LDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMK 217
Query: 202 NSRDGKSYSTNLAFTP----PEYLRT----GRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253
+++G TP PE L++ G E +S G L ++L G P +A
Sbjct: 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD--TPFYA 275
Query: 254 LDLI 257
L+
Sbjct: 276 DSLV 279
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG K + +
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 177
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEG 272
PE L GR + + G ++ +++ G+ P + D K F L+LM+ E
Sbjct: 178 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EI 227
Query: 273 HFSNDDGTELVRLASRCLQYEPRER 297
F G E L S L+ +P++R
Sbjct: 228 RFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 83 VKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLF 142
+ +F DS F EE + S +V L + +V E+MP L +
Sbjct: 107 LSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS 166
Query: 143 HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-MK 201
+++ P KWA + LA LD S G ++ D+ +L D+ G+ +L+ FG MK
Sbjct: 167 NYD-VPEKWARFYTAEVVLA--LDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 202 NSRDGKSYSTNLAFTP----PEYLRT----GRVIPESVVYSFGTLLLDLLSG 245
+++G TP PE L++ G E +S G L ++L G
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG K + +
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 176
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEG 272
PE L GR + + G ++ +++ G+ P + D K F L+LM+ E
Sbjct: 177 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EI 226
Query: 273 HFSNDDGTELVRLASRCLQYEPRERPNAKS 302
F G E L S L+ +P++R S
Sbjct: 227 RFPRTLGPEAKSLLSGLLKKDPKQRLGGGS 256
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ ALDY S+ +Y DL ++ D+DG+ +++ FGL K +DG K + +
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYL 178
Query: 217 PPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNF-LMLMDSCLEGHFS 275
PE L + G ++ +++ G+ P + D K F L+LM+ E F
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQD--HEKLFELILME---EIRFP 231
Query: 276 NDDGTELVRLASRCLQYEPRER 297
G E L S L+ +P++R
Sbjct: 232 RTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 108/261 (41%), Gaps = 26/261 (9%)
Query: 73 GLVDEDRW--IAVKRFNRSAWPDSRQ-FLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128
GL ED +AVK +A D ++ + E + + L + E +VNL+G C G L++
Sbjct: 61 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 120
Query: 129 AEF--------MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
E+ L + +P++ + + +AQ + + +SK ++ D+
Sbjct: 121 TEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVA 179
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYS 234
+L ++ FGL ++ + +Y + + PE + +S V+S
Sbjct: 180 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 239
Query: 235 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD--SCLEGHFSNDDGTELVRLASRCLQY 292
+G LL ++ S P + L+ K + ++ D + F+ + + + C
Sbjct: 240 YGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN---IYSIMQACWAL 294
Query: 293 EPRERPNAKSLVASLTPLQKE 313
EP RP + + + L +E
Sbjct: 295 EPTHRPTFQQICSFLQEQAQE 315
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERL-LVAEFMPNETLS 138
+AVK+ S R F E + + L S+ +V G G + L LV E++P+ L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 139 KHLFHWENQPMKWAMRV---RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNP 192
L + R+ R+ LY +Q ++Y S+ R ++ DL IL + + +
Sbjct: 102 DFL-------QRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHV 153
Query: 193 RLSCFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+++ FGL K K Y + + + PE L +S V+SFG +L +L +
Sbjct: 154 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERL-LVAEFMPNETLS 138
+AVK+ S R F E + + L S+ +V G G + L LV E++P+ L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 139 KHLFHWENQPMKWAMRV---RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNP 192
L + R+ R+ LY +Q ++Y S+ R ++ DL IL + + +
Sbjct: 103 DFL-------QRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHV 154
Query: 193 RLSCFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+++ FGL K K Y + + + PE L +S V+SFG +L +L +
Sbjct: 155 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 163 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL---------MKNSRDGKSYSTNL 213
+ L+Y G+ ++ D+ IL +DG+ +++ FG+ + ++ K++
Sbjct: 127 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 214 AFTPPEYLRTGRVIP-ESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDS 268
+ PE + R ++ ++SFG ++L +G PP L L + L
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 245
Query: 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
+ G ++ S CLQ +P +RP A L+
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 28/234 (11%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKFSLDLASLI 494
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
A L+ AL Y SK R ++ D+ +L +L FGL + D Y +
Sbjct: 495 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 216 TP-----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
P PE + R S V+ FG + ++L H + K F + ++ +
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGV-----KPFQGVKNNDV 601
Query: 271 EGHFSNDDGT--------ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
G N + L L ++C Y+P RP L A L+ + +E ++
Sbjct: 602 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 655
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 163 QALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL---------MKNSRDGKSYSTNL 213
+ L+Y G+ ++ D+ IL +DG+ +++ FG+ + ++ K++
Sbjct: 132 EGLEYLHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 214 AFTPPEYLRTGRVIP-ESVVYSFGTLLLDLLSGK----HIPPSHALDLIRGKNFLMLMDS 268
+ PE + R ++ ++SFG ++L +G PP L L + L
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250
Query: 269 CLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
+ G ++ S CLQ +P +RP A L+
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 79 RWIAVKRFNRSAW-PDSRQFL-EEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136
R +A+K +++ P S Q L E R + +L +V L + L+ E+
Sbjct: 38 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 97
Query: 137 LSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+ +L H + + + R + A+ YC K R ++ DL +L D D N +++
Sbjct: 98 VFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIA 153
Query: 196 CFGLMKNSRDGKSYSTNLAFTP---PEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPS 251
FG G T P PE + + PE V+S G +L L+SG S
Sbjct: 154 DFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 208
Query: 252 HALDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 209 LPFD---GQNLKELRERVLRGKY 228
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERL-LVAEFMPNETLS 138
+AVK+ S R F E + + L S+ +V G G + L LV E++P+ L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 139 KHLFHWENQPMKWAMRV---RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNP 192
L + R+ R+ LY +Q ++Y S+ R ++ DL IL + + +
Sbjct: 115 DFL-------QRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHV 166
Query: 193 RLSCFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+++ FGL K K Y + + + PE L +S V+SFG +L +L +
Sbjct: 167 KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 81 IAVKRFNRS---AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+AVK NR + + E + + L R ++ L + +V E++ L
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 138 SKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSC 196
++ H + M+ R+ + A+DYC + ++ DL +L D N +++
Sbjct: 99 FDYICKHGRVEEMEAR---RLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIAD 154
Query: 197 FGLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLLSG------ 245
FGL DG+ T+ + PE + +GR+ PE ++S G +L LL G
Sbjct: 155 FGLSNMMSDGEFLRTSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Query: 246 KHIPPSHALDLIRGKNFLM 264
+H+P IRG F +
Sbjct: 214 EHVPT--LFKKIRGGVFYI 230
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 108/261 (41%), Gaps = 26/261 (9%)
Query: 73 GLVDEDRW--IAVKRFNRSAWPDSRQ-FLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128
GL ED +AVK +A D ++ + E + + L + E +VNL+G C G L++
Sbjct: 69 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 128
Query: 129 AEF--------MPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLN 180
E+ L + +P++ + + +AQ + + +SK ++ D+
Sbjct: 129 TEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVA 187
Query: 181 TYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYS 234
+L ++ FGL ++ + +Y + + PE + +S V+S
Sbjct: 188 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 247
Query: 235 FGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD--SCLEGHFSNDDGTELVRLASRCLQY 292
+G LL ++ S P + L+ K + ++ D + F+ + + + C
Sbjct: 248 YGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN---IYSIMQACWAL 302
Query: 293 EPRERPNAKSLVASLTPLQKE 313
EP RP + + + L +E
Sbjct: 303 EPTHRPTFQQICSFLQEQAQE 323
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 111/278 (39%), Gaps = 56/278 (20%)
Query: 73 GLVDEDRW--IAVKRFNRSAWPDSRQ-FLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128
GL ED +AVK +A D ++ + E + + L + E +VNL+G C G L++
Sbjct: 69 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 128
Query: 129 AEF------------------------MPNETLS-KHLFHWENQPMKWAMRVRVALYLAQ 163
E+ + N TLS + L H+ +Q +AQ
Sbjct: 129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ-------------VAQ 175
Query: 164 ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTP 217
+ + +SK ++ D+ +L ++ FGL ++ + +Y + +
Sbjct: 176 GMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 234
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD--SCLEGHFS 275
PE + +S V+S+G LL ++ S P + L+ K + ++ D + F+
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFA 292
Query: 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ + + C EP RP + + + L +E
Sbjct: 293 PKN---IYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 81 IAVKRFNRS--AWPDSRQFLE-EARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+A+K N+ A D + +E E + LLR ++ L +E ++V E+ NE
Sbjct: 42 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 101
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+ + M R + A++YC + + ++ DL +L D+ N +++ F
Sbjct: 102 D---YIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADF 157
Query: 198 GLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLL 243
GL DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 158 GLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +++L G + +++ EFM N +L L + Q
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 111
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKS---YST 211
V + +A + Y + ++ L IL + + ++S FGL + D S Y++
Sbjct: 112 VGMLRGIAAGMKYLADMNY-VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
Query: 212 NLA------FTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
L +T PE ++ + S V+S+G ++ +++S
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 81 IAVKRFNRSAWPDSR---QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+A+K N+ S + E + LLR ++ L +E ++V E+ NE
Sbjct: 32 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 91
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+ + M R + A++YC + + ++ DL +L D+ N +++ F
Sbjct: 92 D---YIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADF 147
Query: 198 GLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLL 243
GL DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 148 GLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 197
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 81 IAVKRFNRS--AWPDSRQFLE-EARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+A+K N+ A D + +E E + LLR ++ L +E ++V E+ NE
Sbjct: 41 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 100
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+ + M R + A++YC + + ++ DL +L D+ N +++ F
Sbjct: 101 D---YIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADF 156
Query: 198 GLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLL 243
GL DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 157 GLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 81 IAVKRFNRSAWPDSR---QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+A+K N+ S + E + LLR ++ L +E ++V E+ NE
Sbjct: 36 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 95
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+ + M R + A++YC + + ++ DL +L D+ N +++ F
Sbjct: 96 D---YIVQRDKMSEQEARRFFQQIISAVEYCH-RHKIVHRDLKPENLLLDEHLNVKIADF 151
Query: 198 GLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLL 243
GL DG T+ + PE + +G++ PE V+S G +L +L
Sbjct: 152 GLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 201
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 28/234 (11%)
Query: 96 QFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRV 155
+FL+EA + +V LIG E +++ E S + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRS--FLQVRKFSLDLASLI 114
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL---MKNSRDGKSYSTN 212
A L+ AL Y SK R ++ D+ +L + +L FGL M++S K+
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 213 L--AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 270
L + PE + R S V+ FG + ++L H + K F + ++ +
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGV-----KPFQGVKNNDV 221
Query: 271 EGHFSNDDGT--------ELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEV 316
G N + L L ++C Y+P RP L A L+ + +E ++
Sbjct: 222 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKL 275
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +++L G + + +++ E+M N +L L + +
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 133
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + + + Y S A++ DL IL + + ++S FG+ + D +Y+T
Sbjct: 134 VGMLRGIGSGMKYLSDMS-AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ +T PE + + S V+S+G ++ +++S
Sbjct: 193 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 19/203 (9%)
Query: 79 RWIAVKRFNRSAW-PDSRQFL-EEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136
R +A+K +++ P S Q L E R + +L +V L + L+ E+
Sbjct: 41 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100
Query: 137 LSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+ +L H + + + R + A+ YC K R ++ DL +L D D N +++
Sbjct: 101 VFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIA 156
Query: 196 CFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPS 251
FG G ++ + PE + + PE V+S G +L L+SG S
Sbjct: 157 DFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 211
Query: 252 HALDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 212 LPFD---GQNLKELRERVLRGKY 231
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Query: 73 GLVDEDRW----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
G+V + +W +A+K+ + + + F+ E R + + +V L G C LV
Sbjct: 23 GVVCKAKWRAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLV 78
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMR-VRVALYLAQALDYCSS-KGRALYH-DLNTYRIL 185
E+ +L L E P A + L +Q + Y S + +AL H DL +L
Sbjct: 79 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 138
Query: 186 FDQDGNPRLSC-FGLMKNSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLL 240
G C FG + D +++ TN A+ PE + V+S+G +L
Sbjct: 139 LVAGGTVLKICDFG---TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 195
Query: 241 DLLSGKHIPPSHALDLIRGKNFLML--MDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
++++ + D I G F ++ + + + + L +RC +P +RP
Sbjct: 196 EVITRRK-----PFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRP 250
Query: 299 NAKSLVASLTPLQK 312
+ + +V +T L +
Sbjct: 251 SMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 26/254 (10%)
Query: 73 GLVDEDRW----IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLV 128
G+V + +W +A+K+ + + + F+ E R + + +V L G C LV
Sbjct: 22 GVVCKAKWRAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLV 77
Query: 129 AEFMPNETLSKHLFHWENQPMKWAMR-VRVALYLAQALDYCSS-KGRALYH-DLNTYRIL 185
E+ +L L E P A + L +Q + Y S + +AL H DL +L
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 186 FDQDGNPRLSC-FGLMKNSRDGKSYSTN----LAFTPPEYLRTGRVIPESVVYSFGTLLL 240
G C FG + D +++ TN A+ PE + V+S+G +L
Sbjct: 138 LVAGGTVLKICDFG---TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 241 DLLSGKHIPPSHALDLIRGKNFLML--MDSCLEGHFSNDDGTELVRLASRCLQYEPRERP 298
++++ + D I G F ++ + + + + L +RC +P +RP
Sbjct: 195 EVITRRK-----PFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRP 249
Query: 299 NAKSLVASLTPLQK 312
+ + +V +T L +
Sbjct: 250 SMEEIVKIMTHLMR 263
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 35/269 (13%)
Query: 81 IAVKRFNRSAWPDSRQ-FLEEARAVGLLRS-ERLVNLIGCCCEGEERLLVAEF------- 131
+AVK A R+ + E + + L S E +VNL+G C L+ E+
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 132 ----MPNETLSKHLFHWENQP----------MKWAMRVRVALYLAQALDYCSSKGRALYH 177
E S+ +ENQ + + + A +A+ +++ K ++
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHR 196
Query: 178 DLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESV 231
DL +L ++ FGL ++ +Y + + PE L G +S
Sbjct: 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD 256
Query: 232 VYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCL 290
V+S+G LL ++ S G + P +D NF L+ + + E+ + C
Sbjct: 257 VWSYGILLWEIFSLGVNPYPGIPVD----ANFYKLIQNGFKMDQPFYATEEIYIIMQSCW 312
Query: 291 QYEPRERPNAKSLVASLTPLQKEAEVPSY 319
++ R+RP+ +L + L +AE Y
Sbjct: 313 AFDSRKRPSFPNLTSFLGCQLADAEEAMY 341
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 28 ENGSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEK----APNVVYKGLVDEDR---W 80
E+G + G ++F+L LR G A ++ + A VV K LV++D W
Sbjct: 41 ESGKASSSLGLQDFDL--LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDW 98
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL-VAEFMPNETLSK 139
+ ++ E+A L + C + E RL V E++ L
Sbjct: 99 VQTEK----------HVFEQASNHPFLVG------LHSCFQTESRLFFVIEYVNGGDLMF 142
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
H+ P + A + LA L+Y +G +Y DL +L D +G+ +L+ +G+
Sbjct: 143 HMQRQRKLPEEHARFYSAEISLA--LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGM 199
Query: 200 MKNS-RDGKSYSTNLA---FTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK 246
K R G + ST + PE LR ++ G L+ ++++G+
Sbjct: 200 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 110/280 (39%), Gaps = 58/280 (20%)
Query: 73 GLVDEDRW--IAVKRFNRSAWPDSRQ-FLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128
GL ED +AVK +A D ++ + E + + L + E +VNL+G C G L++
Sbjct: 69 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 128
Query: 129 AEFM--------------------------PNETL-SKHLFHWENQPMKWAMRVRVALYL 161
E+ P E L S+ L H+ +Q +
Sbjct: 129 TEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQ-------------V 175
Query: 162 AQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAF 215
AQ + + +SK ++ D+ +L ++ FGL ++ + +Y + +
Sbjct: 176 AQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 234
Query: 216 TPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD--SCLEGH 273
PE + +S V+S+G LL ++ S P + L+ K + ++ D +
Sbjct: 235 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPA 292
Query: 274 FSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
F+ + + + C EP RP + + + L +E
Sbjct: 293 FAPKN---IYSIMQACWALEPTHRPTFQQICSFLQEQAQE 329
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 100 EARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVA 158
E R + L + + C + +RL V E++ L H+ + K V A
Sbjct: 391 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYA 448
Query: 159 LYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAFTP 217
+A L + SKG +Y DL ++ D +G+ +++ FG+ K N DG +T
Sbjct: 449 AEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGT 505
Query: 218 PEYLRTGRVIPESVVY----------SFGTLLLDLLSGK 246
P+Y + PE + Y +FG LL ++L+G+
Sbjct: 506 PDY-----IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 100 EARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHWENQPMKWAMRVRVA 158
E R + L + + C + +RL V E++ L H+ + K V A
Sbjct: 70 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYA 127
Query: 159 LYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNLAFTP 217
+A L + SKG +Y DL ++ D +G+ +++ FG+ K N DG +T
Sbjct: 128 AEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGT 184
Query: 218 PEYLRTGRVIPESVVY----------SFGTLLLDLLSGK 246
P+Y + PE + Y +FG LL ++L+G+
Sbjct: 185 PDY-----IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
LV M L H++H A V A + L+ + R +Y DL IL
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILL 319
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYS---TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
D G+ R+S GL + +G++ + + PE ++ R ++ G LL +++
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
Query: 244 SGK 246
+G+
Sbjct: 380 AGQ 382
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 110/278 (39%), Gaps = 56/278 (20%)
Query: 73 GLVDEDRW--IAVKRFNRSAWPDSRQ-FLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128
GL ED +AVK +A D ++ + E + + L + E +VNL+G C G L++
Sbjct: 69 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 128
Query: 129 AEF------------------------MPNETLS-KHLFHWENQPMKWAMRVRVALYLAQ 163
E+ + N T S + L H+ +Q +AQ
Sbjct: 129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ-------------VAQ 175
Query: 164 ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTP 217
+ + +SK ++ D+ +L ++ FGL ++ + +Y + +
Sbjct: 176 GMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 234
Query: 218 PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMD--SCLEGHFS 275
PE + +S V+S+G LL ++ S P + L+ K + ++ D + F+
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFA 292
Query: 276 NDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ + + C EP RP + + + L +E
Sbjct: 293 PKN---IYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
LV M L H++H A V A + L+ + R +Y DL IL
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILL 319
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYS---TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLL 243
D G+ R+S GL + +G++ + + PE ++ R ++ G LL +++
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
Query: 244 SGK 246
+G+
Sbjct: 380 AGQ 382
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Query: 81 IAVKRFNRS---AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+AVK NR + + E + + L R ++ L + +V E++ L
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 138 SKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSC 196
++ H + M+ R+ + A+DYC + ++ DL +L D N +++
Sbjct: 99 FDYICKHGRVEEMEAR---RLFQQILSAVDYCH-RHMVVHRDLKPENVLLDAHMNAKIAD 154
Query: 197 FGLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLLSG------ 245
FGL DG+ + + PE + +GR+ PE ++S G +L LL G
Sbjct: 155 FGLSNMMSDGEFLRDSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213
Query: 246 KHIPPSHALDLIRGKNFLM 264
+H+P IRG F +
Sbjct: 214 EHVPT--LFKKIRGGVFYI 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 146 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRD 205
+P+ + + +A+ +++ SS+ + ++ DL IL ++ ++ FGL ++
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 206 GKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-PSHALDLIR 258
Y L + PE + +S V+S+G LL ++ S P P +D
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD--- 308
Query: 259 GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPL 310
++F + + E+ ++ C +P+ERP LV L L
Sbjct: 309 -EDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 33/231 (14%)
Query: 28 ENGSTDALPGFREFNLDQLRAATSGFCADNIVSEHGEK----APNVVYKGLVDEDR---W 80
E+G + G ++F+L LR G A ++ + A VV K LV++D W
Sbjct: 9 ESGKASSSLGLQDFDL--LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDW 66
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLL-VAEFMPNETLSK 139
+ ++ E+A L + C + E RL V E++ L
Sbjct: 67 VQTEK----------HVFEQASNHPFLVG------LHSCFQTESRLFFVIEYVNGGDLMF 110
Query: 140 HLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL 199
H+ P + A + LA L+Y +G +Y DL +L D +G+ +L+ +G+
Sbjct: 111 HMQRQRKLPEEHARFYSAEISLA--LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGM 167
Query: 200 MKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGK 246
K ++ TP PE LR ++ G L+ ++++G+
Sbjct: 168 CKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R LEE ++ +V+LI G + L+ E++ L L E + + M
Sbjct: 72 RNILEE------VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGI--FME 120
Query: 155 VRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---K 207
YLA+ AL + KG +Y DL I+ + G+ +L+ FGL K S DG
Sbjct: 121 DTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 208 SYSTNLAFTPPEYL-RTG--RVIPESVVYSFGTLLLDLLSGKHIPP 250
++ + + PE L R+G R + +S G L+ D+L+G PP
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVD---WWSLGALMYDMLTGA--PP 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V E++ TL + + H E PM + V QAL++ G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVIPESVVYSFGTLL 239
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 240 LDLLSGKHIPP 250
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V E++ TL + + H E PM + V QAL++ G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVIPESVVYSFGTLL 239
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 240 LDLLSGKHIPP 250
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 114/295 (38%), Gaps = 42/295 (14%)
Query: 45 QLRAATSGFCADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRF-NRSAWPDSRQF 97
Q + A + E GE VYKG + ++ + +A+K +++ P +F
Sbjct: 17 QAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 98 LEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----------ENQ 147
EA L+ +V L+G + + ++ + + L + L +++
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 148 PMKWAMR----VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS 203
+K A+ V + +A ++Y SS ++ DL T +L N ++S GL +
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 204 RDGKSYST------NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSH 252
Y + + PE + G+ +S ++S+G +L ++ S P
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 255
Query: 253 ALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
+++IR + L D C ++ L C P RP K + + L
Sbjct: 256 VVEMIRNRQVLPCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 301
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V E++ TL + + H E PM + V QAL++ G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVIPESVVYSFGTLL 239
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 240 LDLLSGKHIPP 250
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V E++ TL + + H E PM + V QAL++ G ++ D+ I+
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 149
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVIPESVVYSFGTLL 239
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 240 LDLLSGKHIPP 250
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V E++ TL + + H E PM + V QAL++ G ++ D+ I+
Sbjct: 110 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMI 166
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVIPESVVYSFGTLL 239
++ FG+ + D + T A + PE R V S VYS G +L
Sbjct: 167 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 240 LDLLSGKHIPP 250
++L+G+ PP
Sbjct: 227 YEVLTGE--PP 235
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R+FL EA +G ++ L G +++ EFM N L L + Q
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQL 118
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK----NSRDGKSYS 210
V + +A + Y + ++ DL IL + + ++S FGL + NS D +Y+
Sbjct: 119 VGMLRGIASGMRYLAEMS-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYT 176
Query: 211 TNLA------FTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
++L +T PE + + S +S+G ++ +++S
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 19/203 (9%)
Query: 79 RWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136
+ +AVK +++ S ++ E R + +L +V L + LV E+
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 137 LSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+ +L H + + + R + A+ YC K ++ DL +L D D N +++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIA 155
Query: 196 CFGLMKNSRDGKSYSTNLAFTP---PEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPS 251
FG G T P PE + + PE V+S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 252 HALDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 115 LIG--CCCEGEERLL-VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK 171
L+G C + E RL V E++ L H+ P + A + LA L+Y +
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHER 125
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVI 227
G +Y DL +L D +G+ +L+ +G+ K ++ TP PE LR
Sbjct: 126 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 184
Query: 228 PESVVYSFGTLLLDLLSGK 246
++ G L+ ++++G+
Sbjct: 185 FSVDWWALGVLMFEMMAGR 203
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 112/285 (39%), Gaps = 42/285 (14%)
Query: 55 ADNIVSEHGEKAPNVVYKGLV------DEDRWIAVKRF-NRSAWPDSRQFLEEARAVGLL 107
A + E GE VYKG + ++ + +A+K +++ P +F EA L
Sbjct: 10 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL 69
Query: 108 RSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----------ENQPMKWAMR--- 154
+ +V L+G + + ++ + + L + L +++ +K A+
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 155 -VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST-- 211
V + +A ++Y SS ++ DL T +L N ++S GL + Y
Sbjct: 130 FVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 212 ----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIP-----PSHALDLIRGKNF 262
+ + PE + G+ +S ++S+G +L ++ S P +++IR +
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248
Query: 263 LMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASL 307
L D C ++ L C P RP K + + L
Sbjct: 249 LPCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 19/203 (9%)
Query: 79 RWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136
+ +AVK +++ S ++ E R + +L +V L + LV E+
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 137 LSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+ +L H + + + R + A+ YC K ++ DL +L D D N +++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIA 155
Query: 196 CFGLMKNSRDGKSYSTNLAFTP---PEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPS 251
FG G T P PE + + PE V+S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 252 HALDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 113/274 (41%), Gaps = 39/274 (14%)
Query: 73 GLVDEDRW--IAVKRFNRSAWPDSRQ-FLEEARAVGLL-RSERLVNLIGCCCEGEERLLV 128
GL ED +AVK +A D ++ + E + + L + E +VNL+G C G L++
Sbjct: 54 GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 113
Query: 129 AEF----------------MPNETLS-----KHLFHWENQPMKWAMRVRVALYLAQALDY 167
E+ M +L+ + L + +P++ + + +AQ + +
Sbjct: 114 TEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAF 173
Query: 168 CSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYL 221
+SK ++ D+ +L ++ FGL ++ + +Y + + PE +
Sbjct: 174 LASK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI 232
Query: 222 RTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDS--CLEGHFSNDDG 279
+S V+S+G LL ++ S P + L+ K + ++ D + F+ +
Sbjct: 233 FDCVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN- 289
Query: 280 TELVRLASRCLQYEPRERPNAKSLVASLTPLQKE 313
+ + C EP RP + + + L +E
Sbjct: 290 --IYSIMQACWALEPTHRPTFQQICSFLQEQAQE 321
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 115 LIG--CCCEGEERLL-VAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK 171
L+G C + E RL V E++ L H+ P + A + LA L+Y +
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLHER 129
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVI 227
G +Y DL +L D +G+ +L+ +G+ K ++ TP PE LR
Sbjct: 130 G-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYG 188
Query: 228 PESVVYSFGTLLLDLLSGK 246
++ G L+ ++++G+
Sbjct: 189 FSVDWWALGVLMFEMMAGR 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 81 IAVKRFNRS---AWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+AVK NR + + E + + L R ++ L + +V E++ L
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
++ +N + R+ + +DYC + ++ DL +L D N +++ F
Sbjct: 104 FDYI--CKNGRLDEKESRRLFQQILSGVDYCH-RHMVVHRDLKPENVLLDAHMNAKIADF 160
Query: 198 GLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLLSG 245
GL DG+ + + PE + +GR+ PE ++S G +L LL G
Sbjct: 161 GLSNMMSDGEFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 127 LVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
+V E++ TL + + H E PM + V QAL++ G ++ D+ IL
Sbjct: 93 IVMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANILI 149
Query: 187 DQDGNPRLSCFGLMKNSRD-GKSYSTNLA------FTPPEYLRTGRVIPESVVYSFGTLL 239
++ FG+ + D G S A + PE R V S VYS G +L
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 240 LDLLSGKHIPP 250
++L+G+ PP
Sbjct: 210 YEVLTGE--PP 218
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +++L G + + +++ E+M N +L L + +
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 112
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + + + Y S ++ DL IL + + ++S FG+ + D +Y+T
Sbjct: 113 VGMLRGIGSGMKYLSDMS-YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ +T PE + + S V+S+G ++ +++S
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVG---LLRSERLVNLIGCCCEGEERLLVAEFMPNETL 137
+A+K +R S + R + LLR ++ L + ++V E+ E
Sbjct: 37 VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELF 96
Query: 138 SKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+ E + M R + A++YC + + ++ DL +L D + N +++ F
Sbjct: 97 D---YIVEKKRMTEDEGRRFFQQIICAIEYCH-RHKIVHRDLKPENLLLDDNLNVKIADF 152
Query: 198 GLMKNSRDGKSYSTNLA---FTPPEYLRTGRVI--PESVVYSFGTLLLDLLSGK 246
GL DG T+ + PE + G++ PE V+S G +L +L G+
Sbjct: 153 GLSNIMTDGNFLKTSCGSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R LEE ++ +V+LI G + L+ E++ L L E + + M
Sbjct: 72 RNILEE------VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGI--FME 120
Query: 155 VRVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---K 207
YLA+ AL + KG +Y DL I+ + G+ +L+ FGL K S DG
Sbjct: 121 DTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH 179
Query: 208 SYSTNLAFTPPEYL-RTG--RVIPESVVYSFGTLLLDLLSGKHIPP 250
+ + + PE L R+G R + +S G L+ D+L+G PP
Sbjct: 180 XFCGTIEYMAPEILMRSGHNRAVD---WWSLGALMYDMLTGA--PP 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R FL EA +G +++L G + + +++ E+M N +L L + +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 118
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG--KSYSTN 212
V + + + Y S ++ DL IL + + ++S FG+ + D +Y+T
Sbjct: 119 VGMLRGIGSGMKYLSDMS-YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
Query: 213 -----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ +T PE + + S V+S+G ++ +++S
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 100 EARAVGLLRSERLVNLIGCCCEGEERL-LVAEFMPNETLSKHLFHW----ENQPMKWAMR 154
E R + LL + + C + +RL V E++ L H+ E Q + +A
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 128
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-NSRDGKSYSTNL 213
+ + L+ K +Y DL ++ D +G+ +++ FG+ K + DG +T
Sbjct: 129 ISIGLFFLH-------KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTRE 179
Query: 214 AFTPPEYLRTGRVIPESVVY----------SFGTLLLDLLSGKHIPPSHALD 255
P+Y + PE + Y ++G LL ++L+G+ PP D
Sbjct: 180 FCGTPDY-----IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ--PPFDGED 224
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFG--LMKNSRDGKSYSTNLAFTP 217
+ A+ +C S+G ++ D+ IL D + G +L FG + + + ++P
Sbjct: 148 VVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSP 206
Query: 218 PEYLRTGR--VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS 275
PE++ + +P + V+S G LL D++ G IP +++ E HF
Sbjct: 207 PEWISRHQYHALP-ATVWSLGILLYDMVCGD-IPFERDQEILEA-----------ELHFP 253
Query: 276 NDDGTELVRLASRCLQYEPRERPNAKSLV 304
+ L RCL +P RP+ + ++
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 34/260 (13%)
Query: 73 GLVDED--RWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSE-RLVNLIGCCCEGEERLLV 128
GL+ D +AVK SA R+ + E + + L + +VNL+G C G L++
Sbjct: 46 GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 105
Query: 129 AE-----------------FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK 171
E F+ ++T S + + + + + +A+ + + +SK
Sbjct: 106 TEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 164
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGR 225
++ DL IL ++ FGL ++ ++ +Y + + PE +
Sbjct: 165 -NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 223
Query: 226 VIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284
ES V+S+G L +L S G P +D F ++ E+
Sbjct: 224 YTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFYKMIKEGFRMLSPEHAPAEMYD 279
Query: 285 LASRCLQYEPRERPNAKSLV 304
+ C +P +RP K +V
Sbjct: 280 IMKTCWDADPLKRPTFKQIV 299
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 34/260 (13%)
Query: 73 GLVDED--RWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSE-RLVNLIGCCCEGEERLLV 128
GL+ D +AVK SA R+ + E + + L + +VNL+G C G L++
Sbjct: 69 GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 128
Query: 129 AE-----------------FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK 171
E F+ ++T S + + + + + +A+ + + +SK
Sbjct: 129 TEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 187
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGR 225
++ DL IL ++ FGL ++ ++ +Y + + PE +
Sbjct: 188 -NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 226 VIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284
ES V+S+G L +L S G P +D F ++ E+
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFYKMIKEGFRMLSPEHAPAEMYD 302
Query: 285 LASRCLQYEPRERPNAKSLV 304
+ C +P +RP K +V
Sbjct: 303 IMKTCWDADPLKRPTFKQIV 322
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 101/246 (41%), Gaps = 34/246 (13%)
Query: 76 DEDRWIAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER---LLVAEFM 132
++ R +K N S S++ E R V +L + + N++ EE +V ++
Sbjct: 47 EDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105
Query: 133 PNETLSKHL------FHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILF 186
L K + E+Q + W V++ L L D + L+ D+ + I
Sbjct: 106 EGGDLFKRINAQKGVLFQEDQILDWF--VQICLALKHVHDR-----KILHRDIKSQNIFL 158
Query: 187 DQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDL 242
+DG +L FG+ + + TP PE +S +++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 243 LSGKHIPPSHALDLIRGKNFLMLMDSC----LEGHFSNDDGTELVRLASRCLQYEPRERP 298
+ K HA + KN ++ + S + H+S D L L S+ + PR+RP
Sbjct: 219 CTLK-----HAFEAGSMKNLVLKIISGSFPPVSLHYSYD----LRSLVSQLFKRNPRDRP 269
Query: 299 NAKSLV 304
+ S++
Sbjct: 270 SVNSIL 275
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 19/203 (9%)
Query: 79 RWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136
+ +AVK +++ S ++ E R +L +V L + LV E+
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 137 LSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+ +L H + + + R + A+ YC K ++ DL +L D D N +++
Sbjct: 100 VFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADXNIKIA 155
Query: 196 CFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPS 251
FG G ++ + PE + + PE V+S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 252 HALDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 34/260 (13%)
Query: 73 GLVDED--RWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSE-RLVNLIGCCCEGEERLLV 128
GL+ D +AVK SA R+ + E + + L + +VNL+G C G L++
Sbjct: 62 GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 121
Query: 129 AE-----------------FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK 171
E F+ ++T S + + + + + +A+ + + +SK
Sbjct: 122 TEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 180
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGR 225
++ DL IL ++ FGL ++ ++ +Y + + PE +
Sbjct: 181 N-CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 239
Query: 226 VIPESVVYSFGTLLLDLLSGKHIP-PSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284
ES V+S+G L +L S P P +D F ++ E+
Sbjct: 240 YTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFYKMIKEGFRMLSPEHAPAEMYD 295
Query: 285 LASRCLQYEPRERPNAKSLV 304
+ C +P +RP K +V
Sbjct: 296 IMKTCWDADPLKRPTFKQIV 315
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 34/260 (13%)
Query: 73 GLVDED--RWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSE-RLVNLIGCCCEGEERLLV 128
GL+ D +AVK SA R+ + E + + L + +VNL+G C G L++
Sbjct: 64 GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 123
Query: 129 AE-----------------FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK 171
E F+ ++T S + + + + + +A+ + + +SK
Sbjct: 124 TEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 182
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGR 225
++ DL IL ++ FGL ++ ++ +Y + + PE +
Sbjct: 183 N-CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV 241
Query: 226 VIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284
ES V+S+G L +L S G P +D F ++ E+
Sbjct: 242 YTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFYKMIKEGFRMLSPEHAPAEMYD 297
Query: 285 LASRCLQYEPRERPNAKSLV 304
+ C +P +RP K +V
Sbjct: 298 IMKTCWDADPLKRPTFKQIV 317
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
R+FL EA +G ++ L G +++ EFM N L L + Q
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQL 120
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK----NSRDGKSYS 210
V + +A + Y + ++ DL IL + + ++S FGL + NS D S
Sbjct: 121 VGMLRGIASGMRYLAEMS-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 211 T-----NLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+ + +T PE + + S +S+G ++ +++S
Sbjct: 180 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 101/260 (38%), Gaps = 34/260 (13%)
Query: 73 GLVDED--RWIAVKRFNRSAWPDSRQ-FLEEARAVGLLRSE-RLVNLIGCCCEGEERLLV 128
GL+ D +AVK SA R+ + E + + L + +VNL+G C G L++
Sbjct: 69 GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 128
Query: 129 AE-----------------FMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSK 171
E F+ ++T S + + + + + +A+ + + +SK
Sbjct: 129 TEYCCYGDLLNFLRRKRDSFICSKT-SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 187
Query: 172 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGR 225
++ DL IL ++ FGL ++ ++ +Y + + PE +
Sbjct: 188 N-CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV 246
Query: 226 VIPESVVYSFGTLLLDLLS-GKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR 284
ES V+S+G L +L S G P +D F ++ E+
Sbjct: 247 YTFESDVWSYGIFLWELFSLGSSPYPGMPVD----SKFYKMIKEGFRMLSPEHAPAEMYD 302
Query: 285 LASRCLQYEPRERPNAKSLV 304
+ C +P +RP K +V
Sbjct: 303 IMKTCWDADPLKRPTFKQIV 322
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 81 IAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AV+ +++ S ++ E R + +L +V L + LV E+ +
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 139 KHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+L H + + + R + A+ YC K ++ DL +L D D N +++ F
Sbjct: 102 DYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADF 157
Query: 198 GLMKNSRDGKSYSTNLAFTP---PEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHA 253
G G T P PE + + PE V+S G +L L+SG S
Sbjct: 158 GFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 212
Query: 254 LDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 213 FD---GQNLKELRERVLRGKY 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 13/188 (6%)
Query: 122 GEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNT 181
GEE ++ EF+ L+ + + A L QAL Y ++G ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQG-VIHRDIKS 169
Query: 182 YRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGT 237
IL DG +LS FG L TP PE + E ++S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 238 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR-LASRCLQYEPRE 296
++++++ G+ PP + ++ L DS ++ + ++R R L +P+E
Sbjct: 230 MVIEMVDGE--PPYFSDSPVQAMK--RLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285
Query: 297 RPNAKSLV 304
R A+ L+
Sbjct: 286 RATAQELL 293
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 10/161 (6%)
Query: 95 RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMR 154
++F E L + +V++I E + LV E++ TLS+++ + P+
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTA 113
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214
+ + + + R ++ D+ IL D + ++ FG+ K + TN
Sbjct: 114 INFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172
Query: 215 FTPPEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPP 250
+Y + E+ +YS G +L ++L G+ PP
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 23/179 (12%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCC-CEGEERL-LVAEFMPNETLS 138
+AVK+ S R F E + + L S+ +V G G L LV E++P+ L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 139 KHLFHWENQPMKWAMRV---RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNP 192
L + R+ R+ LY +Q ++Y S+ R ++ DL IL + + +
Sbjct: 99 DFL-------QRHRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHV 150
Query: 193 RLSCFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLS 244
+++ FGL K K + + + PE L +S V+SFG +L +L +
Sbjct: 151 KIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 81 IAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLS 138
+AVK +++ S ++ E R + +L +V L + LV E+ +
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 94
Query: 139 KHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCF 197
+L H + + + R + A+ YC K ++ DL +L D D N +++ F
Sbjct: 95 DYLVAHGWMKEKEARAKFR---QIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIADF 150
Query: 198 GLMKNSRDGKSYSTNLAFTP---PEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPSHA 253
G G T P PE + + PE V+S G +L L+SG S
Sbjct: 151 GFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 205
Query: 254 LDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 206 FD---GQNLKELRERVLRGKY 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 79 RWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136
+ +AVK +++ S ++ E R + +L +V L + LV E+
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 137 LSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+ +L H + + + R + A+ YC K ++ DL +L D D N +++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIA 155
Query: 196 CFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPS 251
FG G ++ + PE + + PE V+S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 252 HALDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 164 ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PE 219
AL+Y SK +Y DL IL D++G+ +++ FG K D + L TP PE
Sbjct: 118 ALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPE 173
Query: 220 YLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDG 279
+ T +SFG L+ ++L+G P + + ++ ++ + F+ D
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTMKTYEKILNAELRFPPFFNEDVK 231
Query: 280 TELVRLASRCL 290
L RL +R L
Sbjct: 232 DLLSRLITRDL 242
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 25/165 (15%)
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
++ L +AL++ + ++ D+ IL D+ GN +L FG+ D + + +
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 216 TPPEYLRTGRVIP---------ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266
P Y+ R+ P S V+S G L +L +G+ P + + +
Sbjct: 189 RP--YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP-------KWNSVFDQL 239
Query: 267 DSCLEG---HFSNDDGTE----LVRLASRCLQYEPRERPNAKSLV 304
++G SN + E + + CL + +RP K L+
Sbjct: 240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R Y AQ L++ + +Y DL +L D DGN R+S GL + G++ +
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 213 LAFTP----PEYLRTGRVIPESVVY-SFGTLLLDLLSGK 246
A TP PE L G SV Y + G L ++++ +
Sbjct: 349 YAGTPGFMAPELL-LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R Y AQ L++ + +Y DL +L D DGN R+S GL + G++ +
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 213 LAFTP----PEYLRTGRVIPESVVY-SFGTLLLDLLSGK 246
A TP PE L G SV Y + G L ++++ +
Sbjct: 349 YAGTPGFMAPELL-LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 79 RWIAVKRFNRSAWPDS--RQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNET 136
+ +AV+ +++ S ++ E R + +L +V L + LV E+
Sbjct: 40 KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 137 LSKHLF-HWENQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
+ +L H + + + R + A+ YC K ++ DL +L D D N +++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF-IVHRDLKAENLLLDADMNIKIA 155
Query: 196 CFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRVI-PESVVYSFGTLLLDLLSGKHIPPS 251
FG G + + + PE + + PE V+S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 252 HALDLIRGKNFLMLMDSCLEGHF 274
D G+N L + L G +
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 156 RVALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 212
R Y AQ L++ + +Y DL +L D DGN R+S GL + G++ +
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 213 LAFTP----PEYLRTGRVIPESVVY-SFGTLLLDLLSGK 246
A TP PE L G SV Y + G L ++++ +
Sbjct: 349 YAGTPGFMAPELL-LGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 175 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVIPES 230
+Y DL +L D DGN R+S GL + G K Y+ F PE L G S
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL-LGEEYDFS 369
Query: 231 VVY-SFGTLLLDLLSGK 246
V Y + G L ++++ +
Sbjct: 370 VDYFALGVTLYEMIAAR 386
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 28/250 (11%)
Query: 81 IAVK--RFNRSAWPDSRQFLEEARAVGLLRSERLVNLIGCCCEGEER-----LLVAEFMP 133
+AVK + + S+ + +FL EA + ++ L+G C E + +++ FM
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 134 NETLSKHLFH--WENQPMKWAMR--VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQD 189
L +L + E P ++ ++ + +A ++Y S++ L+ DL + D
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDD 183
Query: 190 GNPRLSCFGLMKNSRDGKSYSTN-LAFTPPEYLR----TGRV-IPESVVYSFGTLLLDLL 243
++ FGL K G Y +A P +++ RV +S V++FG + ++
Sbjct: 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243
Query: 244 SGKHIPPSHALDLIRGKNFLMLMDSCLEGHF---SNDDGTELVRLASRCLQYEPRERPNA 300
+ P G + D L GH D EL + C + +P +RP
Sbjct: 244 TRGMTP-------YPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF 296
Query: 301 KSLVASLTPL 310
L L L
Sbjct: 297 SVLRLQLEKL 306
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC SKG ++ D+ + ++ D Q RL +GL + + Y+
Sbjct: 134 IRFYMYELLKALDYCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR 192
Query: 213 LA---FTPPEYLRTGRVIPESV-VYSFGTLLLDLL 243
+A F PE L ++ S+ ++S G +L ++
Sbjct: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 227
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFD-QDGNPRLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC SKG ++ D+ + ++ D Q RL +GL + + Y+
Sbjct: 139 IRFYMYELLKALDYCHSKG-IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR 197
Query: 213 LA---FTPPEYLRTGRVIPESV-VYSFGTLLLDLL 243
+A F PE L ++ S+ ++S G +L ++
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 232
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 98 LEEARAVGLLRSERLVNLIGCC---------CEGEERLLVAEFMPNET---LSKHLFHWE 145
L E + + LL+ E +VNLI C C+G LV +F ++ LS L +
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 146 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG------L 199
+K RV L L Y + + L+ D+ +L +DG +L+ FG L
Sbjct: 124 LSEIK-----RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 200 MKNSRDGKSYS--TNLAFTPPEYL 221
KNS+ + + L + PPE L
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 98 LEEARAVGLLRSERLVNLIGCC---------CEGEERLLVAEFMPNET---LSKHLFHWE 145
L E + + LL+ E +VNLI C C+G LV +F ++ LS L +
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFT 122
Query: 146 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG------L 199
+K RV L L Y + + L+ D+ +L +DG +L+ FG L
Sbjct: 123 LSEIK-----RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 176
Query: 200 MKNSRDGKSYS--TNLAFTPPEYL 221
KNS+ + + L + PPE L
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELL 200
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 98 LEEARAVGLLRSERLVNLIGCC---------CEGEERLLVAEFMPNET---LSKHLFHWE 145
L E + + LL+ E +VNLI C C+G LV +F ++ LS L +
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 146 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG------L 199
+K RV L L Y + + L+ D+ +L +DG +L+ FG L
Sbjct: 124 LSEIK-----RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 200 MKNSRDGKSYS--TNLAFTPPEYL 221
KNS+ + + L + PPE L
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 157 VALYLAQ---ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK-----NSRDGKS 208
V +Y+ + AL++ G +Y D+ IL D +G+ L+ FGL K +
Sbjct: 161 VQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 209 YSTNLAFTPPEYLRTGRVIPESVV--YSFGTLLLDLLSG 245
+ + + P+ +R G + V +S G L+ +LL+G
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV 231
+Y DL IL D+ G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 232 V-YSFGTLLLDLLSGKHIP-------PSHALDLIRGKNFLMLMD-------SCLEGHFSN 276
+S G +L LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
D L L R Q E +E P +SL + LQK
Sbjct: 432 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 465
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV 231
+Y DL IL D+ G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 232 V-YSFGTLLLDLLSGKHIP-------PSHALDLIRGKNFLMLMD-------SCLEGHFSN 276
+S G +L LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
D L L R Q E +E P +SL + LQK
Sbjct: 432 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 465
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV 231
+Y DL IL D+ G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 232 V-YSFGTLLLDLLSGKHIP-------PSHALDLIRGKNFLMLMD-------SCLEGHFSN 276
+S G +L LL G H P H +D + + L D S LEG
Sbjct: 373 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
D L L R Q E +E P +SL + LQK
Sbjct: 432 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 465
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 174 ALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVIPESV 231
+Y DL IL D+ G+ R+S GL + K +++ + PE L+ G S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 232 V-YSFGTLLLDLLSGKHIP-------PSHALDLIRGKNFLMLMD-------SCLEGHFSN 276
+S G +L LL G H P H +D + + L D S LEG
Sbjct: 372 DWFSLGCMLFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 430
Query: 277 DDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQK 312
D L L R Q E +E P +SL + LQK
Sbjct: 431 DVNRRLGCLG-RGAQ-EVKESPFFRSLDWQMVFLQK 464
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E+MP + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E+MP + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 164 ALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGL-MKNSRDGKSYSTNLAFTP----P 218
AL+Y + ++ DL ILF DG+ +L+ FG+ KN+R + TP P
Sbjct: 120 ALNYLHD-NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 219 EYL--RTGRVIP---ESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258
E + T + P ++ V+S G L+++ + PP H L+ +R
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 221
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 148 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 206
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 207 VASRYFKGPELL 218
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 128 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 187 VASRYFKGPELL 198
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 128 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 187 VASRYFKGPELL 198
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 127 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 186 VASRYFKGPELL 197
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 155 VRVALY-LAQALDYCSSKGRALYHDLNTYRILFDQDGNP-RLSCFGLMKNSRDGKSYSTN 212
+R +Y L +ALDYC S+G ++ D+ + ++ D + RL +GL + GK Y+
Sbjct: 129 IRYYIYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 187
Query: 213 LA---FTPPEYL 221
+A F PE L
Sbjct: 188 VASRYFKGPELL 199
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 14/211 (6%)
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAV-KRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
I+ E G+ A VYK E +A K + + + ++ E + +V L+
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
++ EF + + E +P+ + V AL+Y + ++
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD-NKIIH 158
Query: 177 HDLNTYRILFDQDGNPRLSCFGL-MKNSRDGK---SYSTNLAFTPPEYL--RTGRVIP-- 228
DL ILF DG+ +L+ FG+ KN+R + S+ + PE + T + P
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 229 -ESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258
++ V+S G L+++ + PP H L+ +R
Sbjct: 219 YKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 14/211 (6%)
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAV-KRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
I+ E G+ A VYK E +A K + + + ++ E + +V L+
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
++ EF + + E +P+ + V AL+Y + ++
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD-NKIIH 158
Query: 177 HDLNTYRILFDQDGNPRLSCFGL-MKNSRDGK---SYSTNLAFTPPEYL--RTGRVIP-- 228
DL ILF DG+ +L+ FG+ KN+R + S+ + PE + T + P
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 229 -ESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258
++ V+S G L+++ + PP H L+ +R
Sbjct: 219 YKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214
+ + L +A+A+++ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 215 FTPPEYLRTGRV------IPESV----------VYSFGTLLLDLL 243
P TG+V PE + ++S G +L +LL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ LA T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LAGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 78
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 138
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G++++ L T
Sbjct: 139 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT--LCGT- 187
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 245
Query: 273 HFSND 277
HFS+D
Sbjct: 246 HFSSD 250
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 101/245 (41%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G++++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 98 LEEARAVGLLRSERLVNLIGCC---------CEGEERLLVAEFMPNET---LSKHLFHWE 145
L E + + LL+ E +VNLI C C+ LV +F ++ LS L +
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKAS-IYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 146 NQPMKWAMRVRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFG------L 199
+K RV L L Y + + L+ D+ +L +DG +L+ FG L
Sbjct: 124 LSEIK-----RVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 200 MKNSRDGKSYS--TNLAFTPPEYL 221
KNS+ + + L + PPE L
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 14/211 (6%)
Query: 58 IVSEHGEKAPNVVYKGLVDEDRWIAV-KRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI 116
I+ E G+ A VYK E +A K + + + ++ E + +V L+
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 117 GCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWAMRVRVALYLAQALDYCSSKGRALY 176
++ EF + + E +P+ + V AL+Y + ++
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHD-NKIIH 158
Query: 177 HDLNTYRILFDQDGNPRLSCFGL-MKNSRDGKSYSTNLA---FTPPEYL--RTGRVIP-- 228
DL ILF DG+ +L+ FG+ KN+R + + + PE + T + P
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 229 -ESVVYSFGTLLLDLLSGKHIPPSHALDLIR 258
++ V+S G L+++ + PP H L+ +R
Sbjct: 219 YKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 113
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 174 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 222
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 273 HFSND 277
HFS+D
Sbjct: 281 HFSSD 285
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDGKSYSTNLAFTPPE 219
+ AL+Y S+ +Y D+ ++ D+DG+ +++ FGL K DG + T PE
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--TPE 170
Query: 220 YL 221
YL
Sbjct: 171 YL 172
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 14/158 (8%)
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
++A+ + +AL++ SK ++ D+ +L + G ++ FG+ D + + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 216 TPPEYLRTGRVIPE---------SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266
P Y+ R+ PE S ++S G +++L + S + K +
Sbjct: 217 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 274
Query: 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
L ++ E V S+CL+ +ERP L+
Sbjct: 275 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 85
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 146 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 194
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 252
Query: 273 HFSND 277
HFS+D
Sbjct: 253 HFSSD 257
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDGKSYSTNLAFTPPE 219
+ AL+Y S+ +Y D+ ++ D+DG+ +++ FGL K DG + T PE
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--TPE 170
Query: 220 YL 221
YL
Sbjct: 171 YL 172
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDGKSYSTNLAFTPPE 219
+ AL+Y S+ +Y D+ ++ D+DG+ +++ FGL K DG + T PE
Sbjct: 117 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG--TPE 173
Query: 220 YL 221
YL
Sbjct: 174 YL 175
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 85
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 146 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 194
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 252
Query: 273 HFSND 277
HFS+D
Sbjct: 253 HFSSD 257
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
A +A AL Y S +Y DL IL D G+ L+ FGL K + + S ++ TP
Sbjct: 145 AAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP 203
Query: 218 ----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHA 253
PE L + G +L ++L G +PP ++
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYS 241
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 97/245 (39%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWXLX---GT 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
+++R +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + LV L + +V E+ P + HL E +A ++ +
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 155 VRVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA 214
+ + + +A+A+++ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 215 FTPPEYLRTGRV------IPESV----------VYSFGTLLLDLL 243
P G+V PE + ++S G +L +LL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL +I + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKEIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E+ P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FGL K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A + I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADEPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 81 IAVKRFNRSAWPDSRQFLEEARAVGLLRSERLVNLI---GCCCEGEERLLVAEFMPNETL 137
+A+K+ D++ + + + LL+ N+I E E +V E L
Sbjct: 60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 138 SKHLFHWENQPMKWAMRV--RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLS 195
S+ + H++ Q R + + L AL++ S+ R ++ D+ + G +L
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLG 178
Query: 196 CFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPS 251
GL + + + +L TP PE + +S ++S G LL ++ + + P
Sbjct: 179 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS--PF 236
Query: 252 HALDLIRGKNFLMLMDSCLEGHFSNDDGTELVR-LASRCLQYEPRERPNA 300
+ D + + ++ C +D +E +R L + C+ +P +RP+
Sbjct: 237 YG-DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDV 285
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ AL+Y S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGK 246
PE L GR + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ AL+Y S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 119 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGK 246
PE L GR + + G ++ +++ G+
Sbjct: 178 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 156 RVALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
++A+ + +AL++ SK ++ D+ +L + G ++ FG+ D + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 216 TPPEYLRTGRVIPE---------SVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLM 266
P Y+ R+ PE S ++S G +++L + S + K +
Sbjct: 173 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP 230
Query: 267 DSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLV 304
L ++ E V S+CL+ +ERP L+
Sbjct: 231 SPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELM 265
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E+ P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 113
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 173
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 174 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 222
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 273 HFSND 277
HFS+D
Sbjct: 281 HFSSD 285
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ AL+Y S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGK 246
PE L GR + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKEIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E+ P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FGL K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 161 LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNS-RDG---KSYSTNLAFT 216
+ AL+Y S+ +Y D+ ++ D+DG+ +++ FGL K DG K + +
Sbjct: 114 IVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 217 PPEYLRT---GRVIPESVVYSFGTLLLDLLSGK 246
PE L GR + + G ++ +++ G+
Sbjct: 173 APEVLEDNDYGRAVD---WWGLGVVMYEMMCGR 202
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 87
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 88 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 147
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 148 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 196
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 254
Query: 273 HFSND 277
HFS+D
Sbjct: 255 HFSSD 259
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + LV L + +V E+ P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 113
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + +T
Sbjct: 174 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTLCGT 222
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 273 HFSND 277
HFS+D
Sbjct: 281 HFSSD 285
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E+ P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 97/244 (39%), Gaps = 29/244 (11%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L TP
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTP 202
Query: 218 ----PEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGH 273
PE + + ++ G L+ ++ +G PP A I+ ++ H
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPSH 260
Query: 274 FSND 277
FS+D
Sbjct: 261 FSSD 264
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ + +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 92
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E+ P + HL E +A ++ +
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 153 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-GRTWX--LCGT- 201
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 273 HFSND 277
HFS+D
Sbjct: 260 HFSSD 264
>pdb|3JU2|A Chain A, Crystal Structure Of Protein Smc04130 From Sinorhizobium
Meliloti 1021
Length = 284
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 93 DSRQFLEEARAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHWENQPMKWA 152
D+R+ ++EA +G ++ LV + G G + + A M E ++ L H + A
Sbjct: 85 DNRRAVDEAAELG---ADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLA 141
Query: 153 MRVRVALY---------LAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMK 201
+ +Y L QALD C + G + ++ Y + +D D +++ G MK
Sbjct: 142 IEPLHPMYAADRACVNTLGQALDICETLGPGVGVAIDVYHVWWDPDLANQIARAGKMK 199
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
D+++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 79
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + LV L + +V E++ + HL E +A ++ +
Sbjct: 80 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 139
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL +L D+ G +++ FG K + G+++ L T
Sbjct: 140 TFEYLHSLD-------LIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-GRTWX--LCGT- 188
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 246
Query: 273 HFSND 277
HFS+D
Sbjct: 247 HFSSD 251
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 98/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + L L + +V E+ P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 98/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFH----WENQPMKWAMRVRV 157
R + + L L + +V E+ P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 98/245 (40%), Gaps = 31/245 (12%)
Query: 42 NLDQLRAATSGFCADNIVSEHGEKAPNVVYKGLVDEDRWIAVKRFNRSAWPDSRQFLEEA 101
++++ +G ++ +H E + K ++D+ + + +K+ + L E
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEK 93
Query: 102 RAVGLLRSERLVNLIGCCCEGEERLLVAEFMPNETLSKHLFHW----ENQPMKWAMRVRV 157
R + + L L + +V E+ P + HL E +A ++ +
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 ALYLAQALDYCSSKGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP 217
+LD +Y DL ++ DQ G +++ FG K + G+++ L T
Sbjct: 154 TFEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGT- 202
Query: 218 PEYLRTGRVIPESV-----VYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEG 272
PEYL ++ + ++ G L+ ++ +G PP A I+ ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 273 HFSND 277
HFS+D
Sbjct: 261 HFSSD 265
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 175 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTP----PEYLR--TGRVIP 228
++ DL IL D + RLS FG + G+ L TP PE L+ P
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-ELCGTPGYLAPEILKCSMDETHP 280
Query: 229 ----ESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFS------NDD 278
E +++ G +L LL+G PP + ++++ +EG + +D
Sbjct: 281 GYGKEVDLWACGVILFTLLAGS--PP------FWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 279 GTELVRLASRCLQYEPRERPNAKS 302
+ + L SR LQ +P R A+
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQ 356
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 23/150 (15%)
Query: 171 KGRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR-- 225
K ++ DL IL D D N +L+ FG G +S ++ PE +
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 226 ----VIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSN----- 276
E ++S G ++ LL+G PP K LML + G++
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGS--PP-----FWHRKQMLMLR-MIMSGNYQFGSPEW 253
Query: 277 DDGTELVR-LASRCLQYEPRERPNAKSLVA 305
DD ++ V+ L SR L +P++R A+ +A
Sbjct: 254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,914,910
Number of Sequences: 62578
Number of extensions: 494820
Number of successful extensions: 1633
Number of sequences better than 100.0: 449
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 362
Number of HSP's that attempted gapping in prelim test: 1315
Number of HSP's gapped (non-prelim): 453
length of query: 388
length of database: 14,973,337
effective HSP length: 101
effective length of query: 287
effective length of database: 8,652,959
effective search space: 2483399233
effective search space used: 2483399233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)