Query 016513
Match_columns 388
No_of_seqs 194 out of 1429
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:49:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016513.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016513hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 6E-108 2E-112 844.7 37.8 371 2-388 176-550 (550)
2 4drs_A Pyruvate kinase; glycol 100.0 2E-107 7E-112 839.6 40.7 366 2-388 149-526 (526)
3 3khd_A Pyruvate kinase; malari 100.0 1E-107 4E-112 837.4 38.6 366 2-388 150-520 (520)
4 3gg8_A Pyruvate kinase; malari 100.0 9E-107 3E-111 830.6 39.5 366 2-388 141-511 (511)
5 3hqn_D Pyruvate kinase, PK; TI 100.0 6E-107 2E-111 830.8 35.8 371 2-388 125-499 (499)
6 3t05_A Pyruvate kinase, PK; te 100.0 4E-105 1E-109 833.9 36.7 365 2-388 125-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 1E-104 3E-109 811.9 34.3 360 2-387 106-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 2E-102 8E-107 815.2 39.1 364 2-387 105-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 4E-102 2E-106 786.5 31.9 344 1-385 114-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 2E-100 6E-105 786.7 35.6 372 1-387 125-500 (500)
11 1izc_A Macrophomate synthase i 99.8 1.2E-20 3.9E-25 186.5 6.8 155 63-236 100-301 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.8 2.5E-20 8.7E-25 178.5 -1.4 129 70-213 77-240 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.8 5.2E-19 1.8E-23 171.1 7.1 129 70-213 98-261 (287)
14 1dxe_A 2-dehydro-3-deoxy-galac 99.7 4.7E-18 1.6E-22 161.7 9.9 129 70-213 78-240 (256)
15 3qz6_A HPCH/HPAI aldolase; str 99.7 4.7E-18 1.6E-22 162.3 8.7 134 63-213 71-239 (261)
16 1sgj_A Citrate lyase, beta sub 99.7 2E-16 6.9E-21 152.5 10.7 140 62-209 72-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.5 4.4E-14 1.5E-18 138.7 8.8 133 68-212 120-279 (324)
18 3qll_A Citrate lyase; beta bar 99.4 3.9E-13 1.3E-17 131.5 10.5 138 61-209 104-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.3 1.8E-12 6.1E-17 124.3 9.3 132 62-209 62-208 (273)
20 2ols_A Phosphoenolpyruvate syn 99.3 3.3E-12 1.1E-16 138.8 8.6 135 68-213 622-780 (794)
21 3qqw_A Putative citrate lyase; 99.3 7.3E-12 2.5E-16 123.3 8.6 140 62-209 86-254 (332)
22 2hwg_A Phosphoenolpyruvate-pro 99.2 1.3E-11 4.5E-16 129.3 10.1 129 72-212 373-528 (575)
23 2wqd_A Phosphoenolpyruvate-pro 99.2 1.8E-11 6.3E-16 128.1 9.2 126 74-211 377-529 (572)
24 3r4i_A Citrate lyase; TIM beta 99.2 4.7E-11 1.6E-15 117.8 9.4 136 63-209 86-253 (339)
25 3oyz_A Malate synthase; TIM ba 99.0 2.4E-10 8.2E-15 115.0 6.9 130 72-209 98-258 (433)
26 1vbg_A Pyruvate,orthophosphate 98.6 4E-08 1.4E-12 107.4 6.9 136 66-213 680-863 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.5 1.2E-07 4.3E-12 103.5 7.0 118 84-212 695-856 (873)
28 3cuz_A MSA, malate synthase A; 98.2 1.1E-05 3.6E-10 83.6 12.6 119 85-210 207-366 (532)
29 3cux_A Malate synthase; TIM ba 98.1 8.9E-06 3E-10 84.1 9.4 121 82-210 202-364 (528)
30 1p7t_A MSG, malate synthase G; 98.0 1.1E-05 3.7E-10 85.1 8.0 135 73-222 372-541 (731)
31 1h6z_A Pyruvate phosphate diki 97.7 8.8E-05 3E-09 81.2 10.1 138 64-213 698-883 (913)
32 2x0s_A Pyruvate phosphate diki 97.1 0.0022 7.6E-08 70.6 11.2 115 87-212 727-882 (913)
33 4af0_A Inosine-5'-monophosphat 96.0 0.048 1.6E-06 56.4 12.0 125 69-210 279-413 (556)
34 1vp8_A Hypothetical protein AF 95.6 0.28 9.5E-06 44.1 14.0 117 257-376 28-167 (201)
35 1t57_A Conserved protein MTH16 95.6 0.25 8.4E-06 44.6 13.6 110 257-376 36-174 (206)
36 3odm_A Pepcase, PEPC, phosphoe 95.4 0.024 8.3E-07 58.4 7.1 92 83-174 138-259 (560)
37 3f4w_A Putative hexulose 6 pho 95.3 0.028 9.7E-07 50.3 6.6 134 76-231 70-208 (211)
38 1jqo_A Phosphoenolpyruvate car 95.1 0.043 1.5E-06 60.4 8.5 92 84-175 528-638 (970)
39 4fo4_A Inosine 5'-monophosphat 94.6 0.3 1E-05 48.2 12.2 124 70-210 107-240 (366)
40 4fxs_A Inosine-5'-monophosphat 94.5 0.22 7.6E-06 51.0 11.4 125 70-210 230-363 (496)
41 3usb_A Inosine-5'-monophosphat 94.3 0.23 7.7E-06 51.2 11.1 125 71-211 256-389 (511)
42 3ffs_A Inosine-5-monophosphate 94.3 0.17 5.8E-06 50.6 9.8 119 73-210 146-275 (400)
43 3khj_A Inosine-5-monophosphate 94.1 0.31 1.1E-05 47.9 11.2 119 73-210 107-236 (361)
44 4avf_A Inosine-5'-monophosphat 94.0 0.22 7.7E-06 50.9 10.3 123 70-210 228-361 (490)
45 1jqn_A Pepcase, PEPC, phosphoe 94.0 0.098 3.4E-06 57.2 7.9 93 82-174 466-577 (883)
46 3inp_A D-ribulose-phosphate 3- 93.9 0.095 3.3E-06 49.0 6.7 139 75-231 101-244 (246)
47 1ydn_A Hydroxymethylglutaryl-C 93.7 0.81 2.8E-05 43.3 13.0 154 68-232 23-196 (295)
48 3cu2_A Ribulose-5-phosphate 3- 93.3 0.3 1E-05 45.3 8.9 134 78-229 86-235 (237)
49 2z6i_A Trans-2-enoyl-ACP reduc 93.2 0.4 1.4E-05 46.2 10.1 107 78-210 82-191 (332)
50 3ovp_A Ribulose-phosphate 3-ep 93.2 0.15 5.3E-06 46.8 6.7 137 75-233 79-220 (228)
51 3ble_A Citramalate synthase fr 93.0 1.2 4E-05 43.2 13.1 158 68-233 38-211 (337)
52 3ctl_A D-allulose-6-phosphate 92.7 0.48 1.6E-05 43.6 9.3 137 78-231 74-218 (231)
53 1jcn_A Inosine monophosphate d 92.4 1 3.6E-05 46.0 12.3 120 72-211 256-388 (514)
54 1h1y_A D-ribulose-5-phosphate 92.1 0.43 1.5E-05 43.4 8.2 137 75-231 79-222 (228)
55 3r2g_A Inosine 5'-monophosphat 91.9 0.54 1.8E-05 46.3 9.0 116 70-210 99-228 (361)
56 1tqj_A Ribulose-phosphate 3-ep 91.8 0.33 1.1E-05 44.5 6.9 135 78-229 79-220 (230)
57 2ftp_A Hydroxymethylglutaryl-C 91.6 2.6 9.1E-05 39.9 13.4 195 68-283 27-238 (302)
58 3bo9_A Putative nitroalkan dio 91.5 0.89 3E-05 43.8 10.0 111 74-210 93-205 (326)
59 1p1x_A Deoxyribose-phosphate a 91.4 2.6 8.9E-05 39.5 12.8 150 66-232 23-192 (260)
60 1w8s_A FBP aldolase, fructose- 91.4 1.6 5.5E-05 40.8 11.4 120 69-210 39-179 (263)
61 1ydo_A HMG-COA lyase; TIM-barr 91.2 5.4 0.00018 38.0 15.2 191 68-282 25-235 (307)
62 3igs_A N-acetylmannosamine-6-p 90.8 1.2 4.1E-05 40.9 9.8 135 72-232 90-229 (232)
63 1y0e_A Putative N-acetylmannos 90.8 0.98 3.4E-05 40.4 9.0 136 72-227 77-218 (223)
64 4g9p_A 4-hydroxy-3-methylbut-2 90.6 0.97 3.3E-05 44.9 9.3 148 78-232 45-221 (406)
65 2cw6_A Hydroxymethylglutaryl-C 89.9 2.1 7.2E-05 40.5 11.0 194 68-283 24-235 (298)
66 3bw2_A 2-nitropropane dioxygen 89.8 3.1 0.00011 40.5 12.3 111 74-210 113-237 (369)
67 1gte_A Dihydropyrimidine dehyd 89.7 1 3.5E-05 50.1 9.7 127 70-211 647-817 (1025)
68 3ajx_A 3-hexulose-6-phosphate 89.7 1 3.4E-05 39.9 8.0 131 78-228 71-204 (207)
69 2fli_A Ribulose-phosphate 3-ep 89.6 1.6 5.6E-05 38.8 9.4 137 75-229 76-217 (220)
70 2c6q_A GMP reductase 2; TIM ba 89.4 1.2 4.1E-05 43.5 9.0 124 71-211 118-253 (351)
71 1vhc_A Putative KHG/KDPG aldol 89.3 1.9 6.6E-05 39.3 9.7 109 69-209 27-136 (224)
72 3qja_A IGPS, indole-3-glycerol 89.1 3.7 0.00013 38.5 11.9 134 72-227 124-259 (272)
73 4e38_A Keto-hydroxyglutarate-a 89.0 2.6 8.9E-05 38.8 10.4 104 88-209 37-153 (232)
74 1mxs_A KDPG aldolase; 2-keto-3 88.6 5.1 0.00018 36.5 12.1 109 69-209 36-145 (225)
75 1vcv_A Probable deoxyribose-ph 88.6 1.6 5.4E-05 40.1 8.6 151 66-234 12-182 (226)
76 1rpx_A Protein (ribulose-phosp 88.6 2.5 8.6E-05 38.0 10.0 137 74-228 82-225 (230)
77 2yw3_A 4-hydroxy-2-oxoglutarat 88.5 3.4 0.00012 37.0 10.8 107 69-209 23-130 (207)
78 1wbh_A KHG/KDPG aldolase; lyas 88.5 3.6 0.00012 37.1 10.9 109 69-209 26-135 (214)
79 3eeg_A 2-isopropylmalate synth 88.0 6.6 0.00023 37.7 13.1 158 68-233 25-193 (325)
80 1eep_A Inosine 5'-monophosphat 87.7 2 6.9E-05 42.4 9.5 120 72-210 154-285 (404)
81 1yad_A Regulatory protein TENI 87.7 4.5 0.00015 36.0 11.1 132 78-231 82-213 (221)
82 2gjl_A Hypothetical protein PA 87.3 2.1 7E-05 41.0 9.0 110 74-210 87-201 (328)
83 1geq_A Tryptophan synthase alp 87.1 3.5 0.00012 37.4 10.1 118 74-210 99-220 (248)
84 1ub3_A Aldolase protein; schif 87.0 2.6 8.7E-05 38.5 8.9 146 66-230 14-173 (220)
85 3jr2_A Hexulose-6-phosphate sy 86.9 1.1 3.7E-05 40.4 6.4 132 78-231 77-214 (218)
86 1n7k_A Deoxyribose-phosphate a 86.8 3.1 0.00011 38.4 9.5 142 66-231 31-192 (234)
87 3rmj_A 2-isopropylmalate synth 86.6 16 0.00054 35.8 15.1 159 67-233 30-199 (370)
88 1f76_A Dihydroorotate dehydrog 86.0 4 0.00014 39.0 10.3 116 83-211 164-319 (336)
89 3tsm_A IGPS, indole-3-glycerol 85.8 6.7 0.00023 36.9 11.5 129 73-227 132-266 (272)
90 1ypf_A GMP reductase; GUAC, pu 85.8 2.1 7.3E-05 41.3 8.2 120 69-212 104-241 (336)
91 1vzw_A Phosphoribosyl isomeras 85.4 1 3.5E-05 40.9 5.5 128 72-217 33-173 (244)
92 3q58_A N-acetylmannosamine-6-p 85.4 1.8 6E-05 39.7 7.1 130 72-227 90-224 (229)
93 3ewb_X 2-isopropylmalate synth 85.1 26 0.00088 33.0 15.8 205 52-283 13-232 (293)
94 1vrd_A Inosine-5'-monophosphat 85.0 5.8 0.0002 40.1 11.4 117 73-210 239-369 (494)
95 3vnd_A TSA, tryptophan synthas 84.8 2.5 8.5E-05 39.7 7.9 115 78-210 117-235 (267)
96 1h1y_A D-ribulose-5-phosphate 84.7 5.6 0.00019 35.8 10.1 130 74-230 23-168 (228)
97 3oa3_A Aldolase; structural ge 84.3 5.2 0.00018 38.1 9.9 149 66-231 69-229 (288)
98 3nav_A Tryptophan synthase alp 84.3 2.9 9.8E-05 39.4 8.1 114 78-210 119-237 (271)
99 2qjg_A Putative aldolase MJ040 84.0 13 0.00045 34.0 12.6 134 73-232 102-259 (273)
100 3tha_A Tryptophan synthase alp 83.9 8.2 0.00028 35.9 10.9 114 77-210 109-227 (252)
101 1jub_A Dihydroorotate dehydrog 83.8 5.5 0.00019 37.5 10.1 129 69-211 104-272 (311)
102 1thf_D HISF protein; thermophI 83.8 3.4 0.00012 37.5 8.3 132 72-225 85-240 (253)
103 1me8_A Inosine-5'-monophosphat 83.8 5.5 0.00019 40.5 10.6 119 73-211 244-382 (503)
104 2qr6_A IMP dehydrogenase/GMP r 83.8 7.3 0.00025 38.2 11.2 114 78-212 172-308 (393)
105 1ka9_F Imidazole glycerol phos 83.1 4.6 0.00016 36.6 8.8 132 73-225 87-241 (252)
106 3r12_A Deoxyribose-phosphate a 83.0 7.7 0.00026 36.3 10.4 148 66-230 54-213 (260)
107 1xi3_A Thiamine phosphate pyro 82.3 11 0.00039 32.8 11.0 126 78-231 80-211 (215)
108 1mzh_A Deoxyribose-phosphate a 81.8 10 0.00036 34.2 10.7 143 66-227 15-169 (225)
109 1tqx_A D-ribulose-5-phosphate 81.7 3 0.0001 38.2 6.9 134 78-231 81-222 (227)
110 3ngj_A Deoxyribose-phosphate a 81.5 9.7 0.00033 35.2 10.3 150 66-230 38-197 (239)
111 3nvt_A 3-deoxy-D-arabino-heptu 81.2 9.5 0.00033 37.7 10.8 109 78-210 163-283 (385)
112 3s5o_A 4-hydroxy-2-oxoglutarat 80.1 10 0.00035 36.0 10.4 95 78-175 42-148 (307)
113 1yxy_A Putative N-acetylmannos 80.0 8.9 0.0003 34.3 9.5 133 72-229 90-231 (234)
114 3lab_A Putative KDPG (2-keto-3 79.9 16 0.00053 33.3 11.0 104 87-210 15-139 (217)
115 3kws_A Putative sugar isomeras 79.5 33 0.0011 31.0 13.5 105 70-174 37-164 (287)
116 1rpx_A Protein (ribulose-phosp 79.0 6.4 0.00022 35.2 8.2 112 73-210 26-147 (230)
117 2ekc_A AQ_1548, tryptophan syn 78.9 6 0.00021 36.7 8.1 117 74-210 113-234 (262)
118 3qja_A IGPS, indole-3-glycerol 78.4 5.8 0.0002 37.2 7.9 109 72-211 73-190 (272)
119 1nvm_A HOA, 4-hydroxy-2-oxoval 78.3 26 0.00089 33.6 12.8 150 68-233 27-191 (345)
120 1zfj_A Inosine monophosphate d 78.2 16 0.00055 36.6 11.8 120 72-211 234-366 (491)
121 2cu0_A Inosine-5'-monophosphat 78.1 16 0.00056 36.8 11.8 120 73-212 230-359 (486)
122 3m47_A Orotidine 5'-phosphate 77.8 3.8 0.00013 37.3 6.3 128 78-231 85-223 (228)
123 3fkr_A L-2-keto-3-deoxyarabona 77.6 7.7 0.00026 36.9 8.7 96 77-175 35-143 (309)
124 3daq_A DHDPS, dihydrodipicolin 77.6 12 0.00041 35.2 9.9 95 77-175 29-134 (292)
125 3g8r_A Probable spore coat pol 76.8 8.4 0.00029 37.6 8.7 96 96-219 77-174 (350)
126 3cqj_A L-ribulose-5-phosphate 76.8 15 0.0005 33.6 10.2 43 72-114 31-83 (295)
127 1wa3_A 2-keto-3-deoxy-6-phosph 76.6 12 0.0004 32.7 9.1 108 69-210 20-131 (205)
128 3ndo_A Deoxyribose-phosphate a 76.4 15 0.00053 33.6 10.0 154 66-231 24-188 (231)
129 3ivs_A Homocitrate synthase, m 76.2 65 0.0022 32.0 15.8 155 67-232 57-221 (423)
130 3b4u_A Dihydrodipicolinate syn 75.9 18 0.00063 33.9 10.7 99 77-175 30-139 (294)
131 1o4u_A Type II quinolic acid p 75.8 1.5 5.2E-05 41.7 3.1 72 72-149 202-283 (285)
132 2tps_A Protein (thiamin phosph 75.4 32 0.0011 30.2 11.8 125 78-231 88-221 (227)
133 2nv1_A Pyridoxal biosynthesis 74.8 13 0.00044 35.0 9.4 124 78-232 35-173 (305)
134 2y88_A Phosphoribosyl isomeras 74.7 6.4 0.00022 35.4 6.9 117 72-211 85-226 (244)
135 1ep3_A Dihydroorotate dehydrog 74.1 13 0.00043 34.7 9.1 127 70-212 110-272 (311)
136 1qop_A Tryptophan synthase alp 74.1 9.1 0.00031 35.4 8.0 118 74-210 113-234 (268)
137 1ujp_A Tryptophan synthase alp 74.1 6.6 0.00022 36.8 7.0 113 78-210 113-229 (271)
138 3qze_A DHDPS, dihydrodipicolin 73.9 11 0.00037 36.0 8.6 94 78-175 51-155 (314)
139 1zco_A 2-dehydro-3-deoxyphosph 73.9 28 0.00094 32.3 11.2 121 78-222 44-178 (262)
140 1qpo_A Quinolinate acid phosph 73.7 4.3 0.00015 38.5 5.6 64 73-142 204-270 (284)
141 1vzw_A Phosphoribosyl isomeras 73.6 8.7 0.0003 34.6 7.6 123 72-217 86-229 (244)
142 1h5y_A HISF; histidine biosynt 73.3 8.7 0.0003 34.2 7.4 119 72-212 88-229 (253)
143 2h6r_A Triosephosphate isomera 73.2 5.6 0.00019 35.9 6.1 129 78-226 76-215 (219)
144 1xky_A Dihydrodipicolinate syn 73.1 18 0.00063 34.1 10.0 95 77-175 39-144 (301)
145 3m5v_A DHDPS, dihydrodipicolin 73.0 13 0.00045 35.1 8.9 94 78-175 35-140 (301)
146 3q58_A N-acetylmannosamine-6-p 72.9 21 0.00072 32.3 10.0 111 69-209 34-155 (229)
147 1q6o_A Humps, 3-keto-L-gulonat 72.5 9.6 0.00033 33.9 7.5 132 78-231 74-212 (216)
148 2v82_A 2-dehydro-3-deoxy-6-pho 72.4 34 0.0012 29.8 11.1 129 72-233 69-203 (212)
149 3igs_A N-acetylmannosamine-6-p 71.9 28 0.00097 31.5 10.6 112 69-209 34-155 (232)
150 3l21_A DHDPS, dihydrodipicolin 71.2 11 0.00038 35.7 8.0 95 77-175 42-147 (304)
151 3ovp_A Ribulose-phosphate 3-ep 71.1 15 0.00051 33.3 8.5 118 74-217 21-149 (228)
152 3vnd_A TSA, tryptophan synthas 70.9 21 0.00071 33.3 9.6 90 74-174 36-153 (267)
153 2y88_A Phosphoribosyl isomeras 70.5 2.6 8.9E-05 38.1 3.2 66 72-145 32-107 (244)
154 1f6k_A N-acetylneuraminate lya 70.4 31 0.0011 32.3 10.9 95 77-175 30-136 (293)
155 3si9_A DHDPS, dihydrodipicolin 70.0 14 0.00047 35.3 8.3 95 77-175 49-154 (315)
156 1x1o_A Nicotinate-nucleotide p 69.6 5 0.00017 38.1 5.0 72 71-149 204-283 (286)
157 2wkj_A N-acetylneuraminate lya 69.6 24 0.00083 33.2 10.0 96 77-175 38-144 (303)
158 2a4a_A Deoxyribose-phosphate a 69.2 19 0.00067 33.9 9.0 153 66-233 43-215 (281)
159 3o63_A Probable thiamine-phosp 68.8 23 0.0008 32.4 9.4 123 79-232 107-241 (243)
160 2yxg_A DHDPS, dihydrodipicolin 68.8 23 0.00077 33.2 9.5 95 77-175 27-132 (289)
161 3e96_A Dihydrodipicolinate syn 68.8 20 0.00069 34.0 9.2 95 77-175 39-143 (316)
162 3ngf_A AP endonuclease, family 68.4 66 0.0023 28.7 13.2 104 69-174 21-149 (269)
163 2qjg_A Putative aldolase MJ040 68.3 23 0.00077 32.4 9.2 130 69-210 43-186 (273)
164 2ehh_A DHDPS, dihydrodipicolin 68.2 25 0.00085 33.0 9.7 95 77-175 27-132 (294)
165 3glc_A Aldolase LSRF; TIM barr 68.0 38 0.0013 32.0 10.9 129 78-232 132-279 (295)
166 2czd_A Orotidine 5'-phosphate 67.8 14 0.00048 32.6 7.4 127 74-230 69-205 (208)
167 2ztj_A Homocitrate synthase; ( 67.7 93 0.0032 30.2 16.1 154 68-232 22-185 (382)
168 2v9d_A YAGE; dihydrodipicolini 67.0 15 0.00052 35.4 8.0 95 77-175 58-163 (343)
169 3exr_A RMPD (hexulose-6-phosph 66.9 27 0.00093 31.3 9.3 135 78-231 76-217 (221)
170 2rfg_A Dihydrodipicolinate syn 66.7 23 0.00077 33.4 9.0 95 77-175 27-132 (297)
171 3flu_A DHDPS, dihydrodipicolin 66.3 24 0.00083 33.1 9.2 94 78-175 35-139 (297)
172 3tak_A DHDPS, dihydrodipicolin 66.0 29 0.00098 32.5 9.6 94 78-175 29-133 (291)
173 1wv2_A Thiazole moeity, thiazo 65.9 80 0.0027 29.5 12.3 79 136-230 158-236 (265)
174 1vs1_A 3-deoxy-7-phosphoheptul 65.8 68 0.0023 30.0 12.0 123 78-224 59-195 (276)
175 1y0e_A Putative N-acetylmannos 65.8 68 0.0023 28.0 12.9 112 71-210 23-146 (223)
176 1rd5_A Tryptophan synthase alp 65.7 61 0.0021 29.4 11.6 90 73-174 35-148 (262)
177 2v82_A 2-dehydro-3-deoxy-6-pho 65.4 23 0.00077 31.1 8.3 72 71-146 109-181 (212)
178 3cpr_A Dihydrodipicolinate syn 65.4 31 0.0011 32.5 9.8 95 77-175 43-148 (304)
179 2vc6_A MOSA, dihydrodipicolina 65.1 26 0.00088 32.8 9.1 94 77-174 27-131 (292)
180 3inp_A D-ribulose-phosphate 3- 65.1 19 0.00066 33.2 8.0 129 74-230 44-189 (246)
181 1yad_A Regulatory protein TENI 65.0 42 0.0014 29.5 10.1 105 72-211 31-138 (221)
182 2r8w_A AGR_C_1641P; APC7498, d 64.3 26 0.00088 33.6 9.1 95 77-175 61-166 (332)
183 3qfe_A Putative dihydrodipicol 63.8 31 0.0011 32.8 9.5 95 78-175 39-145 (318)
184 3dz1_A Dihydrodipicolinate syn 63.7 41 0.0014 31.8 10.3 93 77-175 35-140 (313)
185 3hgj_A Chromate reductase; TIM 63.6 29 0.00098 33.4 9.3 130 67-210 141-318 (349)
186 3dx5_A Uncharacterized protein 63.4 67 0.0023 28.8 11.4 103 72-174 16-141 (286)
187 3na8_A Putative dihydrodipicol 63.2 23 0.00078 33.7 8.4 94 78-175 52-156 (315)
188 2e6f_A Dihydroorotate dehydrog 63.0 10 0.00035 35.6 5.9 130 69-212 104-275 (314)
189 1w8s_A FBP aldolase, fructose- 62.9 9.4 0.00032 35.4 5.5 71 78-150 166-240 (263)
190 1kbi_A Cytochrome B2, L-LCR; f 62.7 26 0.0009 35.7 9.2 96 95-211 331-433 (511)
191 1xm3_A Thiazole biosynthesis p 62.5 44 0.0015 30.8 10.0 93 126-234 138-231 (264)
192 2w6r_A Imidazole glycerol phos 62.3 21 0.00071 32.4 7.7 130 72-219 85-238 (266)
193 1oy0_A Ketopantoate hydroxymet 61.8 1.1E+02 0.0036 28.8 14.3 32 269-301 189-220 (281)
194 2b7n_A Probable nicotinate-nuc 61.8 7.5 0.00026 36.4 4.6 64 73-142 192-258 (273)
195 3i65_A Dihydroorotate dehydrog 61.7 13 0.00046 37.0 6.6 103 61-171 274-402 (415)
196 1vc4_A Indole-3-glycerol phosp 61.6 20 0.00068 33.0 7.4 131 72-226 117-252 (254)
197 2nuw_A 2-keto-3-deoxygluconate 61.4 61 0.0021 30.1 10.9 94 77-175 26-129 (288)
198 3zwt_A Dihydroorotate dehydrog 61.4 35 0.0012 33.2 9.5 118 83-212 175-329 (367)
199 1tv5_A Dhodehase, dihydroorota 61.3 18 0.0006 36.4 7.4 107 56-170 295-429 (443)
200 3hgm_A Universal stress protei 60.9 13 0.00045 29.7 5.5 41 260-301 98-147 (147)
201 1rd5_A Tryptophan synthase alp 60.5 24 0.00084 32.1 7.8 115 78-210 112-230 (262)
202 1o5k_A DHDPS, dihydrodipicolin 60.4 27 0.00092 33.0 8.3 95 77-175 39-144 (306)
203 3d0c_A Dihydrodipicolinate syn 60.2 29 0.00098 33.0 8.5 95 77-175 39-143 (314)
204 2z08_A Universal stress protei 60.1 21 0.00071 28.4 6.5 41 260-301 87-136 (137)
205 4ef8_A Dihydroorotate dehydrog 60.0 15 0.00051 35.8 6.5 129 69-211 137-307 (354)
206 3i65_A Dihydroorotate dehydrog 60.0 45 0.0015 33.2 10.0 116 84-211 211-375 (415)
207 3pc3_A CG1753, isoform A; CBS, 59.8 30 0.001 35.1 9.0 122 160-301 127-254 (527)
208 3vav_A 3-methyl-2-oxobutanoate 59.5 1.1E+02 0.0039 28.5 12.2 94 68-174 34-147 (275)
209 1ypf_A GMP reductase; GUAC, pu 59.4 12 0.00041 35.9 5.6 73 72-149 159-247 (336)
210 2xio_A Putative deoxyribonucle 59.3 24 0.00083 32.8 7.7 104 71-176 27-147 (301)
211 1z41_A YQJM, probable NADH-dep 59.1 1.2E+02 0.0042 28.6 13.0 32 167-210 275-307 (338)
212 3gr4_A Pyruvate kinase isozyme 59.1 72 0.0025 32.9 11.6 77 21-106 207-303 (550)
213 3l6b_A Serine racemase; pyrido 59.0 1E+02 0.0035 29.2 12.3 113 160-301 90-209 (346)
214 3tva_A Xylose isomerase domain 58.9 67 0.0023 28.9 10.6 39 78-116 28-70 (290)
215 1ko7_A HPR kinase/phosphatase; 58.2 11 0.00037 36.2 5.1 85 112-217 49-157 (314)
216 2hmc_A AGR_L_411P, dihydrodipi 58.1 43 0.0015 32.2 9.4 95 77-175 53-157 (344)
217 2r91_A 2-keto-3-deoxy-(6-phosp 57.6 64 0.0022 29.9 10.3 94 77-175 25-128 (286)
218 2gjl_A Hypothetical protein PA 57.6 94 0.0032 29.2 11.7 128 55-212 13-147 (328)
219 3tsm_A IGPS, indole-3-glycerol 57.6 55 0.0019 30.5 9.8 108 72-210 80-196 (272)
220 3dwg_A Cysteine synthase B; su 57.4 46 0.0016 31.4 9.4 117 159-301 86-210 (325)
221 3t05_A Pyruvate kinase, PK; te 57.3 1.9E+02 0.0064 30.2 15.1 77 22-106 159-254 (606)
222 2wqp_A Polysialic acid capsule 57.3 1.1E+02 0.0039 29.5 12.2 98 95-220 89-188 (349)
223 3oix_A Putative dihydroorotate 57.2 39 0.0013 32.6 8.9 149 69-235 139-324 (345)
224 1vyr_A Pentaerythritol tetrani 57.2 1.2E+02 0.0041 29.2 12.5 122 67-211 150-324 (364)
225 4djd_D C/Fe-SP, corrinoid/iron 57.1 62 0.0021 31.0 10.2 149 70-232 141-316 (323)
226 2y1h_A Putative deoxyribonucle 56.5 35 0.0012 30.8 8.1 105 71-176 20-146 (272)
227 2zbt_A Pyridoxal biosynthesis 56.4 12 0.0004 35.0 4.9 38 194-231 222-259 (297)
228 1w3i_A EDA, 2-keto-3-deoxy glu 56.1 70 0.0024 29.8 10.3 94 77-175 26-129 (293)
229 3rcm_A TATD family hydrolase; 55.9 43 0.0015 31.3 8.8 103 71-176 17-134 (287)
230 2ojp_A DHDPS, dihydrodipicolin 55.8 22 0.00075 33.3 6.7 94 77-174 28-132 (292)
231 1mjh_A Protein (ATP-binding do 55.7 26 0.00089 28.6 6.6 41 260-301 108-157 (162)
232 3h5d_A DHDPS, dihydrodipicolin 55.4 31 0.0011 32.7 7.8 94 78-175 35-140 (311)
233 1ve1_A O-acetylserine sulfhydr 55.3 83 0.0028 29.1 10.8 115 160-301 76-199 (304)
234 3tnj_A Universal stress protei 53.9 21 0.00073 28.6 5.7 41 260-301 97-145 (150)
235 3m5v_A DHDPS, dihydrodipicolin 53.8 65 0.0022 30.2 9.7 92 135-235 42-135 (301)
236 1o66_A 3-methyl-2-oxobutanoate 53.8 1.3E+02 0.0043 28.2 11.5 130 68-210 22-181 (275)
237 3eb2_A Putative dihydrodipicol 53.7 23 0.00079 33.4 6.5 95 77-175 31-136 (300)
238 3b0p_A TRNA-dihydrouridine syn 53.6 23 0.0008 34.1 6.7 125 71-210 70-225 (350)
239 1yxy_A Putative N-acetylmannos 53.0 64 0.0022 28.5 9.2 111 68-207 31-157 (234)
240 3tbh_A O-acetyl serine sulfhyd 52.9 48 0.0016 31.5 8.7 117 159-301 85-210 (334)
241 3l5l_A Xenobiotic reductase A; 52.8 42 0.0014 32.4 8.4 128 67-210 147-325 (363)
242 1p5j_A L-serine dehydratase; l 52.5 1.1E+02 0.0036 29.5 11.3 113 161-301 108-229 (372)
243 4fo4_A Inosine 5'-monophosphat 52.3 1.7E+02 0.0059 28.3 12.8 133 50-210 39-177 (366)
244 3bo9_A Putative nitroalkan dio 52.1 1.6E+02 0.0053 27.8 14.2 127 54-211 23-152 (326)
245 3khd_A Pyruvate kinase; malari 52.0 90 0.0031 31.9 10.9 77 21-106 181-278 (520)
246 3noy_A 4-hydroxy-3-methylbut-2 52.0 1.8E+02 0.0061 28.4 13.3 136 78-232 53-202 (366)
247 3ctl_A D-allulose-6-phosphate 51.8 76 0.0026 28.6 9.5 124 78-228 20-156 (231)
248 2gn0_A Threonine dehydratase c 51.6 1.5E+02 0.005 28.0 12.0 113 160-301 102-221 (342)
249 2e28_A Pyruvate kinase, PK; al 51.4 1.9E+02 0.0064 30.0 13.4 77 22-106 139-235 (587)
250 3tqv_A Nicotinate-nucleotide p 51.0 10 0.00036 35.9 3.6 69 72-149 207-285 (287)
251 2z6i_A Trans-2-enoyl-ACP reduc 50.6 95 0.0032 29.3 10.4 124 56-211 11-138 (332)
252 1tdj_A Biosynthetic threonine 50.4 1.6E+02 0.0055 29.9 12.6 112 161-301 94-212 (514)
253 1vli_A Spore coat polysacchari 50.3 58 0.002 32.1 8.9 98 95-220 99-199 (385)
254 3s3t_A Nucleotide-binding prot 50.2 31 0.0011 27.4 6.0 42 259-301 94-145 (146)
255 3ks6_A Glycerophosphoryl diest 50.2 38 0.0013 30.7 7.2 52 158-229 193-244 (250)
256 3gg8_A Pyruvate kinase; malari 50.1 1.2E+02 0.004 31.0 11.4 77 21-106 172-269 (511)
257 2nli_A Lactate oxidase; flavoe 50.1 40 0.0014 32.8 7.7 96 94-211 216-314 (368)
258 1j0a_A 1-aminocyclopropane-1-c 50.0 36 0.0012 32.0 7.3 121 160-301 86-214 (325)
259 3hqn_D Pyruvate kinase, PK; TI 49.9 1.4E+02 0.0048 30.3 11.9 78 21-106 156-253 (499)
260 3fdx_A Putative filament prote 49.8 34 0.0012 27.0 6.2 42 259-301 93-142 (143)
261 3qc0_A Sugar isomerase; TIM ba 49.8 30 0.001 30.8 6.5 103 72-174 19-141 (275)
262 3l0g_A Nicotinate-nucleotide p 49.6 10 0.00035 36.2 3.3 69 72-149 216-294 (300)
263 4dbe_A Orotidine 5'-phosphate 49.6 31 0.0011 31.1 6.4 84 75-164 126-210 (222)
264 2zbt_A Pyridoxal biosynthesis 49.5 72 0.0025 29.5 9.2 124 74-231 32-172 (297)
265 2dum_A Hypothetical protein PH 49.4 37 0.0013 27.9 6.6 41 260-301 105-154 (170)
266 1jbq_A B, cystathionine beta-s 49.3 46 0.0016 33.1 8.2 122 160-301 175-302 (435)
267 1p0k_A Isopentenyl-diphosphate 49.3 50 0.0017 31.4 8.3 31 169-211 251-281 (349)
268 4aec_A Cysteine synthase, mito 49.1 57 0.002 32.5 8.8 119 160-301 189-313 (430)
269 3a5f_A Dihydrodipicolinate syn 49.0 25 0.00086 32.9 5.9 94 77-174 28-132 (291)
270 1z7w_A Cysteine synthase; tran 48.9 79 0.0027 29.6 9.5 118 161-301 82-205 (322)
271 2egu_A Cysteine synthase; O-ac 48.9 71 0.0024 29.6 9.2 118 160-301 79-202 (308)
272 1tq8_A Hypothetical protein RV 48.6 33 0.0011 28.5 6.1 41 260-301 107-156 (163)
273 2nx9_A Oxaloacetate decarboxyl 48.2 2.1E+02 0.007 28.7 12.9 186 67-282 26-235 (464)
274 3ipw_A Hydrolase TATD family p 48.0 30 0.001 33.1 6.4 106 70-176 51-175 (325)
275 4h27_A L-serine dehydratase/L- 47.9 89 0.003 30.0 9.9 114 160-301 107-229 (364)
276 2nzl_A Hydroxyacid oxidase 1; 47.8 28 0.00094 34.3 6.2 95 96-211 241-337 (392)
277 4adt_A Pyridoxine biosynthetic 47.7 80 0.0027 29.8 9.2 171 72-278 30-237 (297)
278 2uva_G Fatty acid synthase bet 47.6 61 0.0021 38.8 10.0 119 74-210 657-795 (2060)
279 3bdk_A D-mannonate dehydratase 47.6 26 0.00088 34.5 5.9 87 69-175 29-123 (386)
280 3sr7_A Isopentenyl-diphosphate 47.4 38 0.0013 33.0 7.1 31 169-211 278-308 (365)
281 2gou_A Oxidoreductase, FMN-bin 47.3 1.4E+02 0.0047 28.8 11.1 119 68-211 151-323 (365)
282 2qr6_A IMP dehydrogenase/GMP r 47.2 32 0.0011 33.5 6.6 72 73-149 222-314 (393)
283 2htm_A Thiazole biosynthesis p 46.9 89 0.003 29.2 9.1 81 135-230 146-227 (268)
284 3gg7_A Uncharacterized metallo 46.7 60 0.002 29.8 8.0 96 72-176 15-125 (254)
285 3lmz_A Putative sugar isomeras 46.6 92 0.0031 27.5 9.2 91 72-174 31-131 (257)
286 4eiv_A Deoxyribose-phosphate a 46.6 1.6E+02 0.0056 27.8 11.0 154 66-232 37-208 (297)
287 2p10_A MLL9387 protein; putati 46.6 1.3E+02 0.0045 28.3 10.4 72 129-210 177-259 (286)
288 3khj_A Inosine-5-monophosphate 46.5 2.1E+02 0.0071 27.5 12.9 136 49-211 37-174 (361)
289 3sgz_A Hydroxyacid oxidase 2; 46.4 54 0.0019 31.8 8.0 96 94-211 204-302 (352)
290 2pqm_A Cysteine synthase; OASS 46.4 44 0.0015 31.8 7.4 116 160-301 92-216 (343)
291 2wkj_A N-acetylneuraminate lya 46.4 1.8E+02 0.006 27.2 11.5 96 129-234 39-137 (303)
292 3f4w_A Putative hexulose 6 pho 46.2 76 0.0026 27.4 8.4 106 82-210 23-134 (211)
293 1f76_A Dihydroorotate dehydrog 46.2 25 0.00086 33.3 5.5 74 67-145 221-322 (336)
294 1xi3_A Thiamine phosphate pyro 45.9 60 0.002 28.0 7.7 101 74-211 30-136 (215)
295 1xwy_A DNAse TATD, deoxyribonu 45.9 1E+02 0.0035 27.3 9.5 101 72-176 20-132 (264)
296 4h3d_A 3-dehydroquinate dehydr 45.8 1.6E+02 0.0056 26.8 10.9 145 46-209 11-175 (258)
297 1to3_A Putative aldolase YIHT; 45.3 1.3E+02 0.0045 28.2 10.4 56 168-233 220-289 (304)
298 3zwt_A Dihydroorotate dehydrog 45.3 43 0.0015 32.6 7.1 98 66-170 229-354 (367)
299 1geq_A Tryptophan synthase alp 45.3 1.6E+02 0.0055 26.0 11.3 53 112-174 80-138 (248)
300 1zzm_A Putative deoxyribonucle 44.9 1.1E+02 0.0037 27.1 9.4 103 72-176 20-134 (259)
301 3tfx_A Orotidine 5'-phosphate 44.8 48 0.0017 30.7 7.1 46 187-232 187-238 (259)
302 2aam_A Hypothetical protein TM 44.8 62 0.0021 30.8 8.0 92 78-174 129-245 (309)
303 3fg9_A Protein of universal st 44.7 31 0.0011 28.0 5.2 42 259-301 105-155 (156)
304 2o55_A Putative glycerophospho 44.3 21 0.0007 32.5 4.4 118 98-231 127-258 (258)
305 2jbm_A Nicotinate-nucleotide p 44.3 22 0.00075 33.7 4.7 64 73-142 207-273 (299)
306 1o66_A 3-methyl-2-oxobutanoate 44.3 52 0.0018 30.9 7.2 34 267-301 169-202 (275)
307 3ldv_A Orotidine 5'-phosphate 44.3 23 0.00079 32.8 4.7 76 78-161 169-254 (255)
308 3gr7_A NADPH dehydrogenase; fl 44.1 94 0.0032 29.6 9.3 129 67-210 133-307 (340)
309 2ehh_A DHDPS, dihydrodipicolin 43.7 1.5E+02 0.0052 27.4 10.5 96 129-234 28-126 (294)
310 2rkb_A Serine dehydratase-like 43.5 2E+02 0.0069 26.6 11.8 112 161-301 69-189 (318)
311 1o94_A Tmadh, trimethylamine d 43.4 58 0.002 34.4 8.3 32 168-211 290-322 (729)
312 1j6o_A TATD-related deoxyribon 43.1 1.1E+02 0.0039 27.4 9.4 102 71-176 27-140 (268)
313 1q77_A Hypothetical protein AQ 43.1 22 0.00074 28.2 3.9 41 260-301 97-137 (138)
314 3paj_A Nicotinate-nucleotide p 43.1 14 0.00049 35.5 3.2 61 73-142 241-304 (320)
315 1tv5_A Dhodehase, dihydroorota 43.0 64 0.0022 32.3 8.1 89 112-212 296-404 (443)
316 1h5y_A HISF; histidine biosynt 42.8 42 0.0014 29.6 6.2 80 78-172 161-251 (253)
317 1jmv_A USPA, universal stress 42.4 47 0.0016 26.2 5.9 41 260-301 90-136 (141)
318 2gm3_A Unknown protein; AT3G01 42.4 39 0.0013 28.0 5.6 41 260-301 112-161 (175)
319 1y7l_A O-acetylserine sulfhydr 41.9 1.1E+02 0.0039 28.3 9.4 117 160-301 76-202 (316)
320 3dlo_A Universal stress protei 41.7 58 0.002 26.6 6.5 42 259-301 104-154 (155)
321 1qo2_A Molecule: N-((5-phospho 41.6 40 0.0014 30.1 5.9 43 167-221 186-234 (241)
322 3kru_A NADH:flavin oxidoreduct 41.6 1.4E+02 0.0048 28.5 10.1 129 67-210 132-307 (343)
323 1ve5_A Threonine deaminase; ri 41.6 1.5E+02 0.0051 27.4 10.1 113 160-301 79-202 (311)
324 3nav_A Tryptophan synthase alp 41.3 1.1E+02 0.0038 28.3 9.1 111 78-209 41-179 (271)
325 2v9d_A YAGE; dihydrodipicolini 41.2 1.7E+02 0.0056 28.0 10.5 96 129-234 59-157 (343)
326 1rqb_A Transcarboxylase 5S sub 41.2 3E+02 0.01 28.1 13.0 186 67-282 43-254 (539)
327 2r8w_A AGR_C_1641P; APC7498, d 41.2 1.7E+02 0.0057 27.8 10.5 96 129-234 62-160 (332)
328 1qap_A Quinolinic acid phospho 41.1 38 0.0013 32.1 5.8 61 73-142 218-281 (296)
329 3qze_A DHDPS, dihydrodipicolin 41.1 1.4E+02 0.0049 28.0 10.0 91 135-235 58-150 (314)
330 2nv1_A Pyridoxal biosynthesis 41.0 43 0.0015 31.3 6.2 37 195-231 223-259 (305)
331 3flu_A DHDPS, dihydrodipicolin 40.8 1.6E+02 0.0054 27.4 10.1 91 135-235 42-134 (297)
332 1m3u_A 3-methyl-2-oxobutanoate 40.7 2E+02 0.0069 26.6 10.6 128 69-210 23-181 (264)
333 3ve9_A Orotidine-5'-phosphate 40.6 25 0.00087 31.6 4.3 82 73-161 117-200 (215)
334 1v71_A Serine racemase, hypoth 40.2 1.6E+02 0.0055 27.4 10.2 113 160-301 88-207 (323)
335 1vrd_A Inosine-5'-monophosphat 40.1 39 0.0013 33.9 6.1 69 73-146 289-374 (494)
336 2r14_A Morphinone reductase; H 40.0 1.6E+02 0.0053 28.6 10.2 122 67-210 155-328 (377)
337 1jub_A Dihydroorotate dehydrog 40.0 93 0.0032 28.8 8.4 98 68-170 169-298 (311)
338 4dpp_A DHDPS 2, dihydrodipicol 39.8 65 0.0022 31.3 7.4 93 77-175 86-189 (360)
339 2c6q_A GMP reductase 2; TIM ba 39.8 53 0.0018 31.6 6.8 71 72-147 171-258 (351)
340 1jw9_B Molybdopterin biosynthe 39.7 55 0.0019 29.7 6.5 67 98-175 86-152 (249)
341 2yxg_A DHDPS, dihydrodipicolin 39.7 2E+02 0.0067 26.6 10.6 96 129-234 28-126 (289)
342 2q3b_A Cysteine synthase A; py 39.5 1.9E+02 0.0066 26.6 10.6 115 161-301 82-205 (313)
343 1vc4_A Indole-3-glycerol phosp 39.5 1.6E+02 0.0054 26.8 9.7 107 72-210 66-181 (254)
344 1i60_A IOLI protein; beta barr 39.0 2E+02 0.0068 25.2 10.8 42 72-113 15-62 (278)
345 2v03_A Cysteine synthase B; py 39.0 1.3E+02 0.0043 27.9 9.1 115 160-301 75-198 (303)
346 3w01_A Heptaprenylglyceryl pho 38.9 1.8E+02 0.006 26.5 9.8 84 73-170 26-111 (235)
347 2vc6_A MOSA, dihydrodipicolina 38.9 1.7E+02 0.006 27.0 10.1 96 129-234 28-126 (292)
348 2rfg_A Dihydrodipicolinate syn 38.9 1.8E+02 0.0063 27.0 10.3 96 129-234 28-126 (297)
349 3loq_A Universal stress protei 38.8 96 0.0033 27.9 8.1 34 267-301 118-160 (294)
350 3o63_A Probable thiamine-phosp 38.7 57 0.0019 29.8 6.5 75 69-148 141-226 (243)
351 3ngj_A Deoxyribose-phosphate a 38.6 2.3E+02 0.0079 25.8 10.7 105 185-301 90-206 (239)
352 1tqj_A Ribulose-phosphate 3-ep 38.4 69 0.0023 28.7 6.9 131 78-233 24-167 (230)
353 3nbm_A PTS system, lactose-spe 38.4 12 0.00039 30.2 1.5 62 98-174 22-83 (108)
354 2yr1_A 3-dehydroquinate dehydr 38.3 1.2E+02 0.004 27.9 8.6 118 78-210 39-176 (257)
355 3tfx_A Orotidine 5'-phosphate 38.0 34 0.0012 31.8 4.8 74 78-159 151-234 (259)
356 1aj0_A DHPS, dihydropteroate s 38.0 1.7E+02 0.0057 27.3 9.7 92 194-301 42-139 (282)
357 3dzv_A 4-methyl-5-(beta-hydrox 38.0 40 0.0014 31.4 5.4 82 79-174 12-93 (273)
358 2yzr_A Pyridoxal biosynthesis 37.9 2.3E+02 0.0078 27.2 10.7 38 194-231 255-292 (330)
359 1y8q_A Ubiquitin-like 1 activa 37.8 75 0.0026 30.4 7.5 66 98-175 91-156 (346)
360 3l12_A Putative glycerophospho 37.5 93 0.0032 29.0 8.0 49 159-227 258-306 (313)
361 3h8v_A Ubiquitin-like modifier 37.4 66 0.0023 30.2 6.8 67 98-174 90-167 (292)
362 3p6l_A Sugar phosphate isomera 37.3 1.7E+02 0.0058 25.7 9.5 45 72-116 23-82 (262)
363 1f6k_A N-acetylneuraminate lya 37.3 1.9E+02 0.0066 26.7 10.1 98 128-235 30-131 (293)
364 1vhy_A Hypothetical protein HI 37.3 1E+02 0.0035 28.3 8.0 72 13-89 36-110 (257)
365 2g0w_A LMO2234 protein; putati 37.2 1.6E+02 0.0055 26.6 9.5 132 71-234 36-175 (296)
366 2ojp_A DHDPS, dihydrodipicolin 37.2 1.5E+02 0.005 27.5 9.2 96 129-234 29-127 (292)
367 2y5s_A DHPS, dihydropteroate s 37.0 1.9E+02 0.0063 27.2 9.9 91 194-301 50-146 (294)
368 1gox_A (S)-2-hydroxy-acid oxid 36.9 96 0.0033 29.9 8.1 59 157-215 89-161 (370)
369 2bdq_A Copper homeostasis prot 36.8 1.7E+02 0.0058 26.5 9.2 115 165-301 50-184 (224)
370 3f2b_A DNA-directed DNA polyme 36.8 4.8E+02 0.016 29.0 17.1 127 72-203 133-350 (1041)
371 1xg4_A Probable methylisocitra 36.6 41 0.0014 31.8 5.3 61 78-143 174-237 (295)
372 1o5k_A DHDPS, dihydrodipicolin 36.6 1.8E+02 0.006 27.2 9.8 96 129-234 40-138 (306)
373 1eep_A Inosine 5'-monophosphat 36.5 58 0.002 31.7 6.6 71 72-147 204-291 (404)
374 3daq_A DHDPS, dihydrodipicolin 36.3 2.6E+02 0.0089 25.8 10.9 97 129-235 30-129 (292)
375 2d73_A Alpha-glucosidase SUSB; 36.3 1.4E+02 0.0048 31.9 9.7 103 69-175 370-507 (738)
376 3cwc_A Putative glycerate kina 36.3 44 0.0015 32.9 5.5 58 114-174 267-324 (383)
377 3ble_A Citramalate synthase fr 36.2 2.5E+02 0.0087 26.5 11.0 134 75-227 101-265 (337)
378 3dwg_A Cysteine synthase B; su 36.2 1.7E+02 0.0057 27.4 9.6 10 367-376 178-187 (325)
379 1v8a_A Hydroxyethylthiazole ki 36.1 40 0.0014 31.0 5.0 45 125-174 47-91 (265)
380 1zud_1 Adenylyltransferase THI 35.9 73 0.0025 28.9 6.8 67 98-175 83-149 (251)
381 3vzx_A Heptaprenylglyceryl pho 35.8 2.1E+02 0.0073 25.8 9.8 121 75-211 23-161 (228)
382 1vr6_A Phospho-2-dehydro-3-deo 35.8 1.8E+02 0.0062 28.0 9.8 108 78-209 127-246 (350)
383 3idf_A USP-like protein; unive 35.5 33 0.0011 27.0 3.9 39 260-301 91-137 (138)
384 1i4n_A Indole-3-glycerol phosp 35.5 1.2E+02 0.0042 27.8 8.2 145 54-226 98-246 (251)
385 3gnn_A Nicotinate-nucleotide p 35.5 28 0.00094 33.2 3.8 61 73-142 219-282 (298)
386 1gox_A (S)-2-hydroxy-acid oxid 35.1 52 0.0018 31.8 5.9 18 74-92 237-254 (370)
387 1xky_A Dihydrodipicolinate syn 35.0 1.9E+02 0.0066 26.9 9.7 96 129-234 40-138 (301)
388 4e8b_A Ribosomal RNA small sub 34.9 83 0.0028 28.8 7.0 71 13-89 34-108 (251)
389 1p4c_A L(+)-mandelate dehydrog 34.6 1.3E+02 0.0043 29.2 8.6 92 95-212 213-309 (380)
390 3cpr_A Dihydrodipicolinate syn 34.5 2.3E+02 0.0079 26.4 10.2 96 129-234 44-142 (304)
391 1thf_D HISF protein; thermophI 34.4 32 0.0011 30.8 4.0 70 72-146 31-108 (253)
392 1qop_A Tryptophan synthase alp 34.3 2.6E+02 0.0091 25.3 11.4 53 112-174 94-152 (268)
393 1ivn_A Thioesterase I; hydrola 34.2 62 0.0021 26.9 5.6 54 123-176 49-106 (190)
394 3eod_A Protein HNR; response r 34.1 96 0.0033 23.5 6.4 63 263-337 42-109 (130)
395 1ofd_A Ferredoxin-dependent gl 34.1 1.5E+02 0.0051 34.4 10.0 117 79-210 992-1128(1520)
396 3guw_A Uncharacterized protein 33.9 56 0.0019 30.0 5.6 39 138-176 92-130 (261)
397 3u0h_A Xylose isomerase domain 33.9 72 0.0024 28.3 6.3 42 71-112 16-62 (281)
398 3l49_A ABC sugar (ribose) tran 33.9 2.3E+02 0.0079 24.8 9.8 80 87-176 9-93 (291)
399 3dz1_A Dihydrodipicolinate syn 33.7 2.1E+02 0.0071 26.8 9.8 88 135-234 43-132 (313)
400 1vcf_A Isopentenyl-diphosphate 33.2 1.2E+02 0.0041 28.6 8.0 32 169-212 256-287 (332)
401 1tx2_A DHPS, dihydropteroate s 33.2 3.1E+02 0.011 25.7 11.6 91 195-301 68-165 (297)
402 3ijd_A Uncharacterized protein 33.2 86 0.0029 29.9 6.9 102 71-175 166-280 (315)
403 1wa3_A 2-keto-3-deoxy-6-phosph 32.9 2.3E+02 0.0078 24.1 12.4 125 72-231 72-201 (205)
404 2z0t_A Putative uncharacterize 32.7 41 0.0014 27.1 3.9 29 4-33 26-54 (109)
405 3hpd_A Hydroxyethylthiazole ki 32.7 47 0.0016 30.9 4.9 46 124-174 46-91 (265)
406 3si9_A DHDPS, dihydrodipicolin 32.5 2.9E+02 0.0099 25.9 10.6 146 135-301 57-208 (315)
407 2v5j_A 2,4-dihydroxyhept-2-ENE 32.5 95 0.0032 29.0 7.0 89 102-211 30-119 (287)
408 2q02_A Putative cytoplasmic pr 32.4 2.5E+02 0.0086 24.4 12.6 42 72-113 20-67 (272)
409 1o58_A O-acetylserine sulfhydr 32.2 1.7E+02 0.006 26.9 8.9 115 160-301 79-203 (303)
410 1oy0_A Ketopantoate hydroxymet 32.2 3.2E+02 0.011 25.5 10.7 130 68-210 39-199 (281)
411 1vhk_A Hypothetical protein YQ 32.1 1E+02 0.0036 28.4 7.2 71 13-89 37-111 (268)
412 3fij_A LIN1909 protein; 11172J 32.1 95 0.0032 28.0 6.9 45 128-172 55-111 (254)
413 1ub3_A Aldolase protein; schif 32.0 1.3E+02 0.0044 27.0 7.6 103 187-301 68-182 (220)
414 3hgj_A Chromate reductase; TIM 32.0 65 0.0022 30.8 5.9 72 69-146 237-323 (349)
415 1f2d_A 1-aminocyclopropane-1-c 31.8 2.1E+02 0.007 26.8 9.5 126 160-301 83-225 (341)
416 3glc_A Aldolase LSRF; TIM barr 31.7 58 0.002 30.7 5.4 64 78-148 196-264 (295)
417 3l21_A DHDPS, dihydrodipicolin 31.7 3.2E+02 0.011 25.4 10.7 90 135-234 50-141 (304)
418 1z85_A Hypothetical protein TM 31.5 1E+02 0.0035 28.0 6.9 74 13-93 41-118 (234)
419 1tt5_A APPBP1, amyloid protein 31.3 53 0.0018 33.6 5.4 68 98-175 87-155 (531)
420 4fxs_A Inosine-5'-monophosphat 31.2 75 0.0026 32.1 6.5 72 72-148 282-370 (496)
421 2ftp_A Hydroxymethylglutaryl-C 31.2 2.4E+02 0.0083 26.1 9.7 100 193-297 86-202 (302)
422 1ep3_A Dihydroorotate dehydrog 31.1 1.2E+02 0.0042 27.7 7.6 91 72-170 177-296 (311)
423 1at0_A 17-hedgehog; developmen 31.1 65 0.0022 26.8 5.1 42 9-50 88-134 (145)
424 3nl6_A Thiamine biosynthetic b 31.0 2.1E+02 0.0072 29.2 9.9 137 75-231 77-230 (540)
425 1zcc_A Glycerophosphodiester p 31.0 1E+02 0.0036 27.6 6.9 57 154-230 178-236 (248)
426 1to3_A Putative aldolase YIHT; 30.9 52 0.0018 31.0 5.0 70 78-147 184-260 (304)
427 1e0t_A Pyruvate kinase, PK; ph 30.8 2.2E+02 0.0075 28.7 9.7 78 21-106 137-234 (470)
428 3no3_A Glycerophosphodiester p 30.7 2.6E+02 0.009 24.7 9.6 110 98-227 116-234 (238)
429 3qvq_A Phosphodiesterase OLEI0 30.7 73 0.0025 28.7 5.8 50 158-227 199-248 (252)
430 1m3u_A 3-methyl-2-oxobutanoate 30.7 3.3E+02 0.011 25.2 14.0 148 135-301 38-202 (264)
431 4d9b_A D-cysteine desulfhydras 30.7 1.3E+02 0.0045 28.3 7.9 42 260-301 183-232 (342)
432 3ceu_A Thiamine phosphate pyro 30.4 95 0.0032 27.1 6.4 98 73-211 16-115 (210)
433 3iwp_A Copper homeostasis prot 30.2 1.1E+02 0.0039 28.7 7.1 119 74-212 115-240 (287)
434 3b4u_A Dihydrodipicolinate syn 30.1 1.9E+02 0.0065 26.8 8.7 95 129-233 31-129 (294)
435 1yx1_A Hypothetical protein PA 30.1 2.8E+02 0.0097 24.3 10.0 35 78-113 30-67 (264)
436 4dbe_A Orotidine 5'-phosphate 30.0 1.3E+02 0.0044 26.9 7.3 128 78-231 74-208 (222)
437 3hp4_A GDSL-esterase; psychrot 29.6 43 0.0015 27.6 3.8 54 123-176 53-110 (185)
438 4avf_A Inosine-5'-monophosphat 29.5 1E+02 0.0035 31.0 7.2 72 72-148 280-368 (490)
439 3mil_A Isoamyl acetate-hydroly 29.2 64 0.0022 27.6 5.0 55 122-176 57-120 (240)
440 2qul_A D-tagatose 3-epimerase; 29.2 1.4E+02 0.0047 26.5 7.5 44 72-115 18-65 (290)
441 3eul_A Possible nitrate/nitrit 29.1 2E+02 0.007 22.4 8.2 80 264-363 53-137 (152)
442 3sz8_A 2-dehydro-3-deoxyphosph 28.9 1.6E+02 0.0055 27.6 7.9 108 83-214 50-172 (285)
443 1ka9_F Imidazole glycerol phos 28.8 73 0.0025 28.3 5.4 86 74-172 156-249 (252)
444 3cny_A Inositol catabolism pro 28.6 1.2E+02 0.004 27.2 6.9 101 72-174 32-159 (301)
445 4d9i_A Diaminopropionate ammon 28.4 1.9E+02 0.0063 28.0 8.7 117 160-301 126-258 (398)
446 3na8_A Putative dihydrodipicol 28.4 2.6E+02 0.0088 26.2 9.4 90 135-235 59-151 (315)
447 3d0c_A Dihydrodipicolinate syn 28.4 2.1E+02 0.0073 26.8 8.8 95 129-234 40-137 (314)
448 2yw3_A 4-hydroxy-2-oxoglutarat 28.4 3E+02 0.01 24.0 9.6 106 73-215 73-184 (207)
449 8abp_A L-arabinose-binding pro 28.4 1.1E+02 0.0039 27.1 6.8 77 88-175 7-88 (306)
450 3jy6_A Transcriptional regulat 28.3 2.5E+02 0.0087 24.5 9.0 77 87-176 11-92 (276)
451 2zds_A Putative DNA-binding pr 28.2 2.1E+02 0.0071 26.1 8.7 44 71-114 15-68 (340)
452 1vcf_A Isopentenyl-diphosphate 28.2 1.3E+02 0.0043 28.4 7.2 93 72-171 194-320 (332)
453 1k77_A EC1530, hypothetical pr 28.1 2.3E+02 0.008 24.5 8.7 34 78-112 22-55 (260)
454 3l23_A Sugar phosphate isomera 28.1 2E+02 0.0069 26.2 8.6 104 72-175 30-165 (303)
455 1qo2_A Molecule: N-((5-phospho 27.9 1.3E+02 0.0045 26.5 7.0 71 78-154 151-236 (241)
456 3ih1_A Methylisocitrate lyase; 27.8 1.1E+02 0.0037 29.1 6.5 85 93-196 141-235 (305)
457 3olq_A Universal stress protei 27.7 2E+02 0.0069 25.9 8.4 42 259-301 98-148 (319)
458 1kzl_A Riboflavin synthase; bi 27.7 85 0.0029 28.2 5.5 53 3-59 26-85 (208)
459 3kw2_A Probable R-RNA methyltr 27.5 1.1E+02 0.0038 28.1 6.5 70 13-89 33-108 (257)
460 3sgz_A Hydroxyacid oxidase 2; 27.5 75 0.0026 30.8 5.5 18 74-92 229-246 (352)
461 3tak_A DHDPS, dihydrodipicolin 27.4 3.1E+02 0.011 25.2 9.7 91 135-235 36-128 (291)
462 3fkr_A L-2-keto-3-deoxyarabona 27.2 3.7E+02 0.013 25.0 10.3 90 135-235 43-138 (309)
463 3q94_A Fructose-bisphosphate a 27.1 1.4E+02 0.0047 28.1 7.1 103 110-219 78-188 (288)
464 2qkf_A 3-deoxy-D-manno-octulos 27.1 3.3E+02 0.011 25.1 9.8 90 96-209 72-162 (280)
465 1bxb_A Xylose isomerase; xylos 27.0 4.1E+02 0.014 25.2 11.5 102 72-173 34-178 (387)
466 1o60_A 2-dehydro-3-deoxyphosph 27.0 2.4E+02 0.008 26.4 8.7 90 96-209 75-165 (292)
467 3tdn_A FLR symmetric alpha-bet 26.5 45 0.0015 29.9 3.5 69 72-145 36-112 (247)
468 1yix_A Deoxyribonuclease YCFH; 26.2 2.3E+02 0.0077 24.8 8.3 102 71-176 20-131 (265)
469 3o1n_A 3-dehydroquinate dehydr 26.0 3.9E+02 0.013 24.6 11.2 148 45-210 30-196 (276)
470 3ss7_X D-serine dehydratase; t 25.9 1.7E+02 0.0059 28.8 8.0 116 160-301 174-304 (442)
471 3a24_A Alpha-galactosidase; gl 25.9 1.9E+02 0.0064 30.4 8.5 96 70-175 309-424 (641)
472 3h75_A Periplasmic sugar-bindi 25.8 1.2E+02 0.0042 27.8 6.6 78 88-176 8-93 (350)
473 2rdx_A Mandelate racemase/muco 25.8 1.7E+02 0.0058 28.0 7.8 92 69-175 201-294 (379)
474 4ew6_A D-galactose-1-dehydroge 25.7 1.1E+02 0.0037 28.7 6.3 84 124-232 68-156 (330)
475 3iwp_A Copper homeostasis prot 25.7 4.2E+02 0.014 24.8 13.1 139 71-234 47-207 (287)
476 3vc3_A Beta-cyanoalnine syntha 25.7 1.2E+02 0.0041 28.8 6.6 115 161-301 102-225 (344)
477 1p0k_A Isopentenyl-diphosphate 25.6 89 0.0031 29.6 5.7 19 72-91 191-209 (349)
478 3pm6_A Putative fructose-bisph 25.5 3.1E+02 0.011 26.0 9.2 146 66-219 8-200 (306)
479 3u3x_A Oxidoreductase; structu 25.4 1E+02 0.0035 29.2 6.1 86 124-232 76-164 (361)
480 2f6u_A GGGPS, (S)-3-O-geranylg 25.3 3.5E+02 0.012 24.4 9.3 86 73-169 23-114 (234)
481 1xm3_A Thiazole biosynthesis p 25.2 1E+02 0.0035 28.2 5.8 64 73-145 137-211 (264)
482 3kts_A Glycerol uptake operon 25.2 1.4E+02 0.0048 26.4 6.4 78 114-210 11-89 (192)
483 3fst_A 5,10-methylenetetrahydr 25.2 53 0.0018 31.1 3.9 48 71-119 164-211 (304)
484 3vkj_A Isopentenyl-diphosphate 25.1 98 0.0034 30.0 5.9 19 193-211 279-297 (368)
485 3ru6_A Orotidine 5'-phosphate 25.1 55 0.0019 31.1 3.9 67 78-152 165-241 (303)
486 2v03_A Cysteine synthase B; py 25.0 2.4E+02 0.008 26.0 8.4 21 354-376 155-175 (303)
487 3fs2_A 2-dehydro-3-deoxyphosph 25.0 2.2E+02 0.0076 26.8 8.1 107 83-213 71-192 (298)
488 1pii_A N-(5'phosphoribosyl)ant 25.0 4.9E+02 0.017 25.9 11.1 111 72-211 69-185 (452)
489 3gv0_A Transcriptional regulat 24.8 1.8E+02 0.0062 25.7 7.4 31 134-176 66-96 (288)
490 3apt_A Methylenetetrahydrofola 24.7 44 0.0015 31.7 3.2 62 71-133 161-222 (310)
491 1tzj_A ACC deaminase, 1-aminoc 24.7 1.8E+02 0.0062 27.1 7.6 126 160-301 83-222 (338)
492 1i4n_A Indole-3-glycerol phosp 24.7 69 0.0024 29.5 4.5 67 71-142 158-231 (251)
493 3cwo_X Beta/alpha-barrel prote 24.5 2.5E+02 0.0086 23.6 8.0 124 73-218 65-211 (237)
494 2pcq_A Putative dihydrodipicol 24.3 2.2E+02 0.0077 26.1 8.0 89 77-174 25-123 (283)
495 3l6b_A Serine racemase; pyrido 24.3 1.8E+02 0.006 27.6 7.5 102 182-305 1-108 (346)
496 3m47_A Orotidine 5'-phosphate 24.2 47 0.0016 29.9 3.2 72 76-154 142-215 (228)
497 3gl9_A Response regulator; bet 24.2 2.3E+02 0.0078 21.2 7.1 63 263-337 37-106 (122)
498 3e96_A Dihydrodipicolinate syn 24.0 3.9E+02 0.013 24.9 9.8 91 135-235 47-138 (316)
499 2nzl_A Hydroxyacid oxidase 1; 24.0 95 0.0033 30.3 5.6 18 73-91 263-280 (392)
500 3o1n_A 3-dehydroquinate dehydr 24.0 3.2E+02 0.011 25.2 9.0 147 68-231 116-274 (276)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=5.5e-108 Score=844.66 Aligned_cols=371 Identities=46% Similarity=0.744 Sum_probs=357.1
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|++||++|++++++||+||+|||+|.|+|+++ +++.+.|+|++||.|+++||||+||..+++|+||+||++|| +|++
T Consensus 176 i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v--~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl-~f~~ 252 (550)
T 3gr4_A 176 LWLDYKNICKVVEVGSKIYVDDGLISLQVKQK--GADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGV 252 (550)
T ss_dssp EEBSCTTHHHHCCTTCEEEETTTTEEEEEEEE--CSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHH-HHHH
T ss_pred EecchHHHHhhcCCCCEEEEeCCEEEEEEEEE--eCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHH-HHHH
Confidence 78999999999999999999999999999977 78899999999999999999999999999999999999999 9999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMM 161 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~i 161 (388)
++|+|+|++|||++++|++++++++.+.|.++.|||||||++||+|+|||++++|||||||||||+|+|.++++.+||+|
T Consensus 253 ~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~i 332 (550)
T 3gr4_A 253 EQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMM 332 (550)
T ss_dssp HTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHH
T ss_pred HcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchHH
Q 016513 162 IYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRA 241 (388)
Q Consensus 162 i~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~~ 241 (388)
+.+|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|..
T Consensus 333 I~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~ 412 (550)
T 3gr4_A 333 IGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQ 412 (550)
T ss_dssp HHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccc
Q 016513 242 VFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPA 321 (388)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~a 321 (388)
.|.++....+.+.+..+++|.+|+++|++++|++||+||.||+||+++|||||.|||||+ | ++++++
T Consensus 413 ~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~-------T------~~~~~a 479 (550)
T 3gr4_A 413 LFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAV-------T------RNPQTA 479 (550)
T ss_dssp HHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEE-------E------SCHHHH
T ss_pred HHHhhhhccCCCCChHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEE-------c------CCHHHH
Confidence 777665544556688899999999999999999999999999999999999999999999 7 999999
Q ss_pred cccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec----CCCceEEEEEeC
Q 016513 322 RHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI----GVASVIKICIVK 388 (388)
Q Consensus 322 R~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~----g~tn~ikI~~v~ 388 (388)
|||+|+|||+|++++....+.|..+.+.+++.|+++++++|++++||.||+++|+ |+||++||+.|+
T Consensus 480 R~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 480 RQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp HHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSCCTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred HHHhccCCeEEEEecccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 9999999999999987656678888999999999999999999999999999997 899999999885
No 2
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=2.1e-107 Score=839.62 Aligned_cols=366 Identities=48% Similarity=0.781 Sum_probs=348.2
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|+++|++|++++++||.||+|||+|.|+|+++ +++.+.|+|.+||.|+++||||+||..+++|.||+||..|+.+|++
T Consensus 149 i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v--~~~~i~~~V~~gG~L~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~ 226 (526)
T 4drs_A 149 ISCSYSLLPKSVQIGSTVLIADGSLSTQVLEI--GDDFIVCKVLNSVTIGERKNMNLPGCKVHLPIIGDKDRHDIVDFAL 226 (526)
T ss_dssp EEBSCTTSTTTCCTTCEEEETTTTEEEEEEEE--CSSEEEEECCSCCEECSSCBEECTTCCCCCCSSCHHHHHHHHHTTT
T ss_pred eeecchhhHHHhcCCCEEEEeCCCceEEEEEE--eCCeEEEEeccCccccccccccCCCcccCcccccchhHHHHHHHHH
Confidence 78999999999999999999999999999977 7889999999999999999999999999999999999998338999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCC-------CceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAK-------NIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKI 154 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~-------~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v 154 (388)
++|+|||++|||++++|++++|++|+++|. ++.||||||+++|++|+|+|++++|||||+|||||+|+|++++
T Consensus 227 ~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~v 306 (526)
T 4drs_A 227 KYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKI 306 (526)
T ss_dssp TTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGH
T ss_pred HhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHH
Confidence 999999999999999999999999988763 6889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 155 FLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 155 ~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
|.+||+|+++|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|
T Consensus 307 p~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE 386 (526)
T 4drs_A 307 FVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAE 386 (526)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCc
Q 016513 235 SSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWT 314 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~ 314 (388)
+.++|...|++.....+.+.+..++||.+|+++|++++|++|++||.||+||+++|||||+|||||+ |
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~-------T----- 454 (526)
T 4drs_A 387 TCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIAC-------T----- 454 (526)
T ss_dssp TTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEE-------E-----
T ss_pred hcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEE-------C-----
Confidence 9999988888776666677788999999999999999999999999999999999999999999999 7
Q ss_pred CCCcccccccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec-----CCCceEEEEEeC
Q 016513 315 CSDETPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI-----GVASVIKICIVK 388 (388)
Q Consensus 315 ~~~~~~aR~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~-----g~tn~ikI~~v~ 388 (388)
+++.++|||+|+|||+|++++. ..+.+++++.|+++++++|++++||.||+++|+ |+||++||++||
T Consensus 455 -~~~~~~r~l~L~wGV~p~~~~~------~~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 455 -AKPEVARGLKIARGVKTYVLNS------IHHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp -SCHHHHHHGGGSTTEEEEECSC------CCCHHHHHHHHHHHHHHTTSCCTTCEEEEEC----------CCEEEEECC
T ss_pred -CCHHHHHhhhccCCeEEEEeCC------CCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeccCCCCCCcceEEEEEECC
Confidence 9999999999999999999976 678999999999999999999999999999997 899999999987
No 3
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.3e-107 Score=837.37 Aligned_cols=366 Identities=49% Similarity=0.822 Sum_probs=349.0
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|++||++|++++++||+||+|||+|.|+|+++ +++.++|+|++||.|+++||||+||..+++|.||+||++||.+|++
T Consensus 150 i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~--~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~dl~~f~~ 227 (520)
T 3khd_A 150 IACSYKKLPQSVKPGNIILIADGSVSCKVLET--HEDHVITEVLNSAVIGERKNMNLPNVKVDLPIISEKDKNDILNFAI 227 (520)
T ss_dssp EEBSCTTHHHHCCC-CEEEETTTTEEEEEEEE--CSSCEEEEECC-CCCCSSCEEECTTSCCCSCSSCHHHHHHHHHTHH
T ss_pred EecccHHHHhhcCcCcEEEEeCCEEEEEEEEE--ECCEEEEEEEeCeEEeCCceeecCCCcCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999977 7889999999999999999999999999999999999999878999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMM 161 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~i 161 (388)
++|+|+|++|||++++|++++|+++++.|.++.|||||||++||+|+|||++++|||||||||||+|+|.+++|.+||+|
T Consensus 228 ~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~i 307 (520)
T 3khd_A 228 PMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLM 307 (520)
T ss_dssp HHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHH
T ss_pred HcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchHH
Q 016513 162 IYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRA 241 (388)
Q Consensus 162 i~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~~ 241 (388)
+.+|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|..
T Consensus 308 I~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~ 387 (520)
T 3khd_A 308 ISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKL 387 (520)
T ss_dssp HHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccc
Q 016513 242 VFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPA 321 (388)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~a 321 (388)
.|++.....+.+.+..+++|.+|+++|++++|++|++||.||+||+++|||||.|||||+ | ++++++
T Consensus 388 ~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~~PIia~-------T------~~~~~~ 454 (520)
T 3khd_A 388 LYQSLVNAIETPISVQEAVARSAVETAESIQASLIIALTETGYTARLIAKYKPSCTILAL-------S------ASDSTV 454 (520)
T ss_dssp HHHHHHHHSCSCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEE-------E------SCHHHH
T ss_pred hHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcCCCCCEEEE-------c------CCHHHH
Confidence 776655444455678899999999999999999999999999999999999999999999 7 999999
Q ss_pred cccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec-----CCCceEEEEEeC
Q 016513 322 RHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI-----GVASVIKICIVK 388 (388)
Q Consensus 322 R~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~-----g~tn~ikI~~v~ 388 (388)
|||+|+|||+|++++. ..+.+.+++.++++++++|++++||.||+++|+ |+||++||+.|+
T Consensus 455 r~l~L~~GV~p~~~~~------~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~~G~TN~lrv~~v~ 520 (520)
T 3khd_A 455 KCLNVHRGVTCIKVGS------FQGTDIVIRNAIEIAKQRNMAKVGDSVIAIHGIKEEVSGGTNLMKVVQIE 520 (520)
T ss_dssp HHGGGSTTEEEEECCS------CCCHHHHHHHHHHHHHHTTSSCTTCEEEEEEC-CCSSTTCEEEEEEEECC
T ss_pred HHHhccCCeEEEEeCC------CCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEeC
Confidence 9999999999999876 567899999999999999999999999999997 799999999874
No 4
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=8.8e-107 Score=830.64 Aligned_cols=366 Identities=52% Similarity=0.852 Sum_probs=349.6
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|++||++|++++++||.||+|||+|.|+|.++ +++.+.|+|++||.|+++||||+||..+++|.||+||++||.+|++
T Consensus 141 i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v--~~~~i~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~Dl~~f~~ 218 (511)
T 3gg8_A 141 IACSYGALPQSVKPGNTILIADGSLSVKVVEV--GSDYVITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDILNFGI 218 (511)
T ss_dssp EEBSCTTHHHHCCTTCEEEETTTTEEEEEEEE--CSSEEEEEESSCEEECSSCBEECTTCCCCSCSSCHHHHHHHHHTTT
T ss_pred EEcchHHHHhhcCCCCEEEEECCEEEEEEEEE--eCCEEEEEEEeCeEEcCCcceecCCCccCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999977 7889999999999999999999999999999999999999867999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMM 161 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~i 161 (388)
++|+|+|++|||++++|++++|+++++.|.++.|||||||++|++|+|+|++++|||||||||||+|+|.++++.+||+|
T Consensus 219 ~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~i 298 (511)
T 3gg8_A 219 PMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMM 298 (511)
T ss_dssp TTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHH
T ss_pred HcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchHH
Q 016513 162 IYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRA 241 (388)
Q Consensus 162 i~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~~ 241 (388)
+.+|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|..
T Consensus 299 i~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~ 378 (511)
T 3gg8_A 299 IAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPA 378 (511)
T ss_dssp HHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccc
Q 016513 242 VFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPA 321 (388)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~a 321 (388)
.|++.....+.+.+..+++|.+|+++|++++|++|++||.||+||+++|||||.|||||+ | ++++++
T Consensus 379 ~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP~~PIia~-------T------~~~~~~ 445 (511)
T 3gg8_A 379 LYRAMCLAVPPPISTQEAVARAAVETAECVNAAIILALTETGQTARLIAKYRPMQPILAL-------S------ASESTI 445 (511)
T ss_dssp HHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEE-------E------SCHHHH
T ss_pred HHhhhhhcccCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEE-------c------CCHHHH
Confidence 776554444455678899999999999999999999999999999999999999999999 7 999999
Q ss_pred cccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec-----CCCceEEEEEeC
Q 016513 322 RHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI-----GVASVIKICIVK 388 (388)
Q Consensus 322 R~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~-----g~tn~ikI~~v~ 388 (388)
|||+|+|||+|++++. ..+.+++++.|+++++++|++++||.||+++|+ |+||++||+.|+
T Consensus 446 r~l~L~~GV~p~~~~~------~~~~d~~~~~a~~~~~~~g~~~~GD~vVi~~G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 446 KHLQVIRGVTTMQVPS------FQGTDHVIRNAIVVAKERELVTEGESIVAVHGMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp HHGGGSTTEEEEECCC--------CHHHHHHHHHHHHHHTTSCCTTCEEEEEEEC------CCEEEEEEECC
T ss_pred HHhhccCCeEEEEeCC------CCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEcC
Confidence 9999999999999876 467899999999999999999999999999997 799999999885
No 5
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=6.1e-107 Score=830.80 Aligned_cols=371 Identities=44% Similarity=0.732 Sum_probs=349.3
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|++||++|++++++||+||+|||+|.|+|++++ .++.++|+|++||.|+++||||+||..+++|+||+||++|| +|++
T Consensus 125 i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~-~~~~i~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl-~~~~ 202 (499)
T 3hqn_D 125 FYIDYQNLSKVVRPGNYIYIDDGILILQVQSHE-DEQTLECTVTNSHTISDRRGVNLPGCDVDLPAVSAKDRVDL-QFGV 202 (499)
T ss_dssp EEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEE-ETTEEEEEECSCEEEETTCBEECTTSCCCCCSSCHHHHHHH-HHHH
T ss_pred EecchHHHHhhcCCCCEEEEeCCEEEEEEEEEc-CCCeEEEEEEeCcEeeCCCceecCCCCCCCCCCCHHHHHHH-HHHH
Confidence 799999999999999999999999999999873 25689999999999999999999999999999999999999 9999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMM 161 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~i 161 (388)
++|+|+|++|||++++|++++++++.+.|.++.|||||||++||+|+|||++++|||||||||||+|+|.++++.+||+|
T Consensus 203 ~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~i 282 (499)
T 3hqn_D 203 EQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKIL 282 (499)
T ss_dssp HTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHH
T ss_pred HcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchHH
Q 016513 162 IYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRA 241 (388)
Q Consensus 162 i~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~~ 241 (388)
+.+|+++|||||+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|..
T Consensus 283 I~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~ 362 (499)
T 3hqn_D 283 ISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYV 362 (499)
T ss_dssp HHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCCHHHHHHHHHHHHHHHHhcchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccc
Q 016513 242 VFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPA 321 (388)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~a 321 (388)
.|.+.....+.+.+..+++|.+|+++|++++|++|++||.||+||+++|||||.|||||+ | ++++++
T Consensus 363 ~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr~RP~~pIia~-------T------~~~~~~ 429 (499)
T 3hqn_D 363 FFNSIKKLQHIPMSADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYRPNCPIVCV-------T------TRLQTC 429 (499)
T ss_dssp HHHHHHHTCCSSCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEE-------E------SCHHHH
T ss_pred HHhhhhhccCCCCCHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEE-------c------CCHHHH
Confidence 777665555556678899999999999999999999999999999999999999999999 7 999999
Q ss_pred cccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec----CCCceEEEEEeC
Q 016513 322 RHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI----GVASVIKICIVK 388 (388)
Q Consensus 322 R~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~----g~tn~ikI~~v~ 388 (388)
|||+|+|||+|++++....+ +..+.+.+++.|+++++++|++++||.||+++|+ |+||++||+.|.
T Consensus 430 r~l~L~~GV~p~~~~~~~~~-~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 430 RQLNITQGVESVFFDADKLG-HDEGKEHRVAAGVEFAKSKGYVQTGDYCVVIHADHKVKGYANQTRILLVE 499 (499)
T ss_dssp HHGGGSTTEEEEECCHHHHC-CCTTCHHHHHHHHHHHHHTTSCCTTCEEEEEEECC-----CEEEEEEECC
T ss_pred HHhhccCCeEEEEecccccc-ccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 99999999999998752110 1246789999999999999999999999999998 899999999873
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=4.3e-105 Score=833.93 Aligned_cols=365 Identities=45% Similarity=0.724 Sum_probs=348.9
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|++||++|++++++||+||+|||+|.|+|++++++++.+.|+|++||.|+++||||+||..+++|+||+||++|| +|++
T Consensus 125 i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl-~f~~ 203 (606)
T 3t05_A 125 FSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDI-RFGI 203 (606)
T ss_dssp EEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEETTCBEECSSSCCCCCSSCHHHHHHH-HHHH
T ss_pred EEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEeCCceEECCCCccCCCCCChhHHHHH-HHHH
Confidence 789999999999999999999999999995445688999999999999999999999999999999999999999 9999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMM 161 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~i 161 (388)
++|+|||++|||++++|++++|+++.++|.++.|||||||++|++|+|||++++|||||||||||+|+|.+++|.+||+|
T Consensus 204 ~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~i 283 (606)
T 3t05_A 204 KENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDL 283 (606)
T ss_dssp HTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHH
T ss_pred HcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchHH
Q 016513 162 IYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRA 241 (388)
Q Consensus 162 i~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~~ 241 (388)
+++|+++|||||+||||||||++||+|||||++|||||++||+||+|||+|||.|+||+|||++|++||+++|+.++|..
T Consensus 284 i~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~ 363 (606)
T 3t05_A 284 IRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKK 363 (606)
T ss_dssp HHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccc
Q 016513 242 VFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPA 321 (388)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~a 321 (388)
.|++.... .+.+..+++|.+|+++|++++|++|++||.||+||+++|||||+|||||+ | ++++++
T Consensus 364 ~~~~~~~~--~~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pIia~-------t------~~~~~~ 428 (606)
T 3t05_A 364 LLSDRTKL--VETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAV-------T------PSEETA 428 (606)
T ss_dssp HHHHHHHH--SCCCHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSEEEEE-------E------SCHHHH
T ss_pred hhhhhccc--cCCCHHHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCCCCCEEEE-------c------CCHHHH
Confidence 66654322 24577899999999999999999999999999999999999999999999 7 999999
Q ss_pred cccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec-----CCCceEEEEEeC
Q 016513 322 RHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI-----GVASVIKICIVK 388 (388)
Q Consensus 322 R~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~-----g~tn~ikI~~v~ 388 (388)
|||+|+|||+|++++. ..+.+++++.|+++++++|++++||.||+++|+ |+||++||+.|.
T Consensus 429 r~l~L~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 429 RQCSIVWGVQPVVKKG------RKSTDALLNNAVATAVETGRVTNGDLIIITAGVPTGETGTTNMMKIHLVG 494 (606)
T ss_dssp HHHHTSSSEEEEECCC------CSSHHHHHHHHHHHHHHTTSCCTTCEEEEEECSSTTTCSSCCEEEEEECC
T ss_pred HhhhccCCeEEEEeCC------CCCHHHHHHHHHHHHHHcCCCCCCCEEEEEeCccCCCCCCccceEEEEec
Confidence 9999999999999986 467899999999999999999999999999997 899999999874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=1e-104 Score=811.93 Aligned_cols=360 Identities=45% Similarity=0.718 Sum_probs=324.9
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|++||++|++++++||.||+|||+|.|+|+++ +++.+.|+|++||.|+++||||+||..+++|.||++|.+|| +|++
T Consensus 106 v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~--~~~~i~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~Di-~~~l 182 (470)
T 1e0t_A 106 VAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAI--EGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDL-IFGC 182 (470)
T ss_dssp EEBSCTTHHHHCCTTCEEEETTTTEEEEEEEE--ETTEEEEEECSCEEECSSCEEECSSCCCCCCSSCHHHHHHH-HHHH
T ss_pred EecchHHHHhhcCCCCEEEEeCCEEEEEEEEE--eCCeEEEEEecCcEEeCCceeecCCCcCCCCCCCcCCHHHH-HHHH
Confidence 78999999999999999999999999999987 68899999999999999999999999999999999999999 9999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccC-CCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPH-AKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKM 160 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~-~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ 160 (388)
++|+|+|++|||++++|++++++++.+. |.++.|||||||++|++|+|+|++++|||||||||||+|+|.++++.+||+
T Consensus 183 ~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDgImVargDLgveig~e~v~~~qk~ 262 (470)
T 1e0t_A 183 EQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKM 262 (470)
T ss_dssp HHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHH
T ss_pred HcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCEEEECchHhhhhcCHHHHHHHHHH
Confidence 9999999999999999999999999988 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
|+.+|+++|||+|+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|.
T Consensus 263 ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~ 342 (470)
T 1e0t_A 263 MIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSR 342 (470)
T ss_dssp HHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999976654
Q ss_pred HHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCccc
Q 016513 241 AVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETP 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~ 320 (388)
..|..... ..+..+++|.+|+++|++++|++|++||.||+||+++|||||+|||||+ | +++++
T Consensus 343 ~~~~~~~~----~~~~~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~a~-------t------~~~~~ 405 (470)
T 1e0t_A 343 LEFNNDNR----KLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILAL-------T------TNEKT 405 (470)
T ss_dssp CC-------------CHHHHHHHHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEEEE-------E------SCHHH
T ss_pred HHHhhhcc----ccchHHHHHHHHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEEEE-------C------CCHHH
Confidence 33432111 1356799999999999999999999999999999999999999999999 7 99999
Q ss_pred ccccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec----CCCceEEEEEe
Q 016513 321 ARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI----GVASVIKICIV 387 (388)
Q Consensus 321 aR~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~----g~tn~ikI~~v 387 (388)
+|||+|+|||+|++++. ..+.+.+++.++++++++|++++||.||+++|+ |+||++||+.+
T Consensus 406 ~r~l~l~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 406 AHQLVLSKGVVPQLVKE------ITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL 470 (470)
T ss_dssp HHHGGGSTTEEEEECSC------CCSHHHHHHHHHHHHHHTSSSCTTCEEEEEECSSSCTTCCCEEEEEEC
T ss_pred HHHhhhhccceEEEecC------CCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeCCCCCCCccceEEEEEC
Confidence 99999999999999875 567899999999999999999999999999986 89999999875
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=2.3e-102 Score=815.15 Aligned_cols=364 Identities=44% Similarity=0.701 Sum_probs=344.8
Q ss_pred eeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccc
Q 016513 2 ITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 2 i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l 81 (388)
|++||++|++++++||+||+|||+|.|+|++++.+++.+.|+|++||.|+++||||+||..+++|.||++|+.|| +|++
T Consensus 105 i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~KgvnlPg~~~~lp~ltekD~~di-~~~l 183 (587)
T 2e28_A 105 ISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVNVPGVKVNLPGITEKDRADI-LFGI 183 (587)
T ss_dssp EEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEECTTSCCCCCSCCHHHHHHH-HHHH
T ss_pred EecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCceeecCCCcCCCCCCCcccHHHH-HHHH
Confidence 789999999999999999999999999999876678899999999999999999999999999999999999999 9999
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCC-CceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHH
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAK-NIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKM 160 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~-~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ 160 (388)
++|+|+|++|||++++|++++++++.++|. ++.||+||||++|++|+|||++++|||||||||||+|+|.++++.+||+
T Consensus 184 ~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ 263 (587)
T 2e28_A 184 RQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKL 263 (587)
T ss_dssp HHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHH
T ss_pred HcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHH
Confidence 999999999999999999999999999884 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
|+++|+++|||+|+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.++|.
T Consensus 264 ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~ 343 (587)
T 2e28_A 264 LIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHR 343 (587)
T ss_dssp HHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCCCHHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987764
Q ss_pred HHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCccc
Q 016513 241 AVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETP 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~ 320 (388)
..|.+... ..+.+..+++|.+|+++|++++|++|++||.||+||+++|||||+|||||+ | +++++
T Consensus 344 ~~~~~~~~--~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~a~-------t------~~~~~ 408 (587)
T 2e28_A 344 DILSQRTK--ESQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAV-------T------SNEAV 408 (587)
T ss_dssp HHHHHHHT--TCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEEEE-------E------SSHHH
T ss_pred hHhhhhhc--ccccchHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCCEEEE-------C------CCHHH
Confidence 44543221 122356899999999999999999999999999999999999999999999 7 99999
Q ss_pred ccccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec-----CCCceEEEEEe
Q 016513 321 ARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI-----GVASVIKICIV 387 (388)
Q Consensus 321 aR~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~-----g~tn~ikI~~v 387 (388)
+|||+|+|||+|++++. ..+.+.+++.+++++++.||+++||.|++++|. |.||++|+..+
T Consensus 409 ~r~l~l~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~G~~k~GD~VVItqG~P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 409 SRRLALVWGVYTKEAPH------VNTTDEMLDVAVDAAVRSGLVKHGDLVVITAGVPVGETGSTNLMKVHVI 474 (587)
T ss_dssp HHHGGGSTTEEEEECCC------CCSHHHHHHHHHHHHHHHTCCCTTCEEEEEECSSCSSCCCCCEEEEEEC
T ss_pred HHHHHHhcCceEEeccc------cCCHHHHHHHHHHHHHhCCcccccceEEEecCcccCcCCCCceEEEEEE
Confidence 99999999999999875 567899999999999999999999999999985 78999999765
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4.4e-102 Score=786.54 Aligned_cols=344 Identities=30% Similarity=0.406 Sum_probs=330.5
Q ss_pred CeeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHh--
Q 016513 1 MITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILR-- 78 (388)
Q Consensus 1 ~i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~-- 78 (388)
.|+++|++|++++++||.||+|||+|.|+|+++ +++.++|+|++||.|+++||||+||..+++|.||+||++|| +
T Consensus 114 ~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~--~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~dl-~~~ 190 (461)
T 3qtg_A 114 YIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNT--GSDWIEAVAESSGVITGGKAIVVEGKDYDISTPAEEDVEAL-KAI 190 (461)
T ss_dssp SEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEE--CSSEEEEEESSCEEECTTCBEEETTCCCCCCSSCHHHHHHH-HHH
T ss_pred EEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEE--ECCEEEEEEEECCEecCCCceecCCCCCCCCCCCHHHHHHH-HHH
Confidence 479999999999999999999999999999976 78899999999999999999999999999999999999999 9
Q ss_pred ccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHH
Q 016513 79 WGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQ 158 (388)
Q Consensus 79 ~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~q 158 (388)
|++++|+|+|++|||++++|++++|++++++|.++.|||||||++|++|+|||++++|||||||||||+|+|.++++.+|
T Consensus 191 ~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Q 270 (461)
T 3qtg_A 191 SPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQ 270 (461)
T ss_dssp GGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHH
T ss_pred HHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcccEEEccccccccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 016513 159 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLD 238 (388)
Q Consensus 159 k~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~ 238 (388)
|+|+.+|+++|||+|+||||||||++||+|||||++||||||+||+||+|||+|||.|+||+|||++|++||+++|+.+.
T Consensus 271 k~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~ 350 (461)
T 3qtg_A 271 RRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIP 350 (461)
T ss_dssp HHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCc
Q 016513 239 YRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDE 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~ 318 (388)
|. +.+.+..+++|.+|+++|++++|+ |++||.||+||+++|||||.|||||+ | +++
T Consensus 351 ~~----------~~~~~~~~aia~aa~~~a~~~~a~-Iv~~T~SG~tA~~vsr~RP~~pIia~-------T------~~~ 406 (461)
T 3qtg_A 351 QS----------PLLQNSRDRFAKGLVELAQDLGAN-ILVFSMSGTLARRIAKFRPRGVVYVG-------T------PNV 406 (461)
T ss_dssp CC----------CCCCSHHHHHHHHHHHHHHHHTCE-EEEECSSSHHHHHHHTTCCSSCEEEE-------E------SCH
T ss_pred hc----------cCCCCHHHHHHHHHHHHHHhcCCC-EEEECCCcHHHHHHHhhCCCCCEEEe-------C------CCH
Confidence 41 234578899999999999999999 99999999999999999999999999 7 999
Q ss_pred ccccccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec-CCCceEEEE
Q 016513 319 TPARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI-GVASVIKIC 385 (388)
Q Consensus 319 ~~aR~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~-g~tn~ikI~ 385 (388)
+++|||+|+|||+|++++ ..+.|++++.+++.++++| ||+++|. |+||++||.
T Consensus 407 ~~~r~l~l~~GV~p~~~~-------~~~~d~~~~~a~~~~~~~g-------vvit~g~p~~TN~~~v~ 460 (461)
T 3qtg_A 407 RVARSLSIVWALEPLYIP-------AENYEEGLEKLISLKGTTP-------FVATYGIRGGVHSVKVK 460 (461)
T ss_dssp HHHHHHTTSTTEEEEECC-------CSSHHHHHHHHHHHHCCSS-------EEEEECCTTSCCEEEEE
T ss_pred HHHhhceeccceEEEEeC-------CCCHHHHHHHHHHHHHHCC-------EEEEeccCCCCeEEEEE
Confidence 999999999999999987 2578999999999999988 8888888 999999986
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=1.7e-100 Score=786.68 Aligned_cols=372 Identities=43% Similarity=0.708 Sum_probs=349.9
Q ss_pred CeeecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhcc
Q 016513 1 MITMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWG 80 (388)
Q Consensus 1 ~i~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~ 80 (388)
.|++||++|++++++||.||+|||+|.|+|++++ +++.++|+|++||.|++|||||+||..+++|++|++|..|| +++
T Consensus 125 ~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~-~~~~v~~~v~~gG~L~~~KgvNlPg~~~~lp~lt~~D~~DI-~~~ 202 (500)
T 1a3w_A 125 IMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVV-DDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDL-RFG 202 (500)
T ss_dssp CEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCC-C--CEEEEBCSCCCCCSSCBEECTTCCCCCCSSCHHHHHHH-HHH
T ss_pred EEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEc-cCCeEEEEEecCCEEeCCCCCcCCCCccCCCCCChhHHHHH-HHH
Confidence 4799999999999999999999999999999542 67889999999999999999999999999999999999999 999
Q ss_pred ccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHH
Q 016513 81 VPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKM 160 (388)
Q Consensus 81 l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ 160 (388)
+++|+|+|++|||++++|++++++++.+.|.++.||+||||++|++|+|+|++++|||||||||||+++|.++++.+|++
T Consensus 203 l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ 282 (500)
T 1a3w_A 203 VKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKK 282 (500)
T ss_dssp HHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHH
T ss_pred HHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHH
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
|+.+|+++|||+|+||||||||+.+|.|||||++|++|++++|+|++|||+||+.|+||+|||++|++||+++|+.++|.
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred HHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCccc
Q 016513 241 AVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETP 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~ 320 (388)
..|.+.....+.+.+..+++|.+|+++|++++|++|++||.||+||+++|||||+|||||+ | +++++
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~RP~~pI~a~-------t------~~~~~ 429 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILV-------T------RCPRA 429 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTCCSSCEEEE-------E------SCTTH
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEE-------c------CCHHH
Confidence 6565433212333467899999999999999999999999999999999999999999999 7 99999
Q ss_pred ccccccccccEEEEeCCCCcCCCccCHHHHHHHHHHHHHHcCCCCCCCEEEEEeec----CCCceEEEEEe
Q 016513 321 ARHSLIYRGLIPILAEGSAKATDAESTEVILEGALKSAIEKGLCSPGDAVVALHRI----GVASVIKICIV 387 (388)
Q Consensus 321 aR~l~l~~GV~P~l~~~~~~~~~~~~~e~~i~~a~~~~~~~g~~~~GD~vVvv~g~----g~tn~ikI~~v 387 (388)
+|||+|+|||+|++++......|..+.+.+++.++++++++|++++||.||+++|+ |+||++||+.|
T Consensus 430 ~r~l~l~~GV~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 430 ARFSHLYRGVFPFVFEKEPVSDWTDDVEARINFGIEKAKEFGILKKGDTYVSIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp HHHGGGSTTEEEEECCSCCCSCTTTHHHHHHHHHHHHHHHTTCSCTTCEEEEEECCCTTTCCCCEEEEEEC
T ss_pred HHhhhhhCCeEEEEecccccccccCCHHHHHHHHHHHHHHCCCCCCcCEEEEEecccCCCCCCceEEEEEC
Confidence 99999999999999987556678888999999999999999999999999999997 89999999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.81 E-value=1.2e-20 Score=186.48 Aligned_cols=155 Identities=14% Similarity=0.158 Sum_probs=132.1
Q ss_pred ccCCCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHcc-----C---------------------------C
Q 016513 63 VDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP-----H---------------------------A 110 (388)
Q Consensus 63 ~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~-----~---------------------------~ 110 (388)
++++.+ |..+| +++++.|+++|++|||+|++|++++++++.. + +
T Consensus 100 VRv~~~---~~~di-~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~ 175 (339)
T 1izc_A 100 VRVPKH---DEVSL-STALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSN 175 (339)
T ss_dssp EECCTT---CHHHH-HHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHH
T ss_pred EEeCCC---CHHHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcC
Confidence 455554 45788 8899999999999999999999999999853 1 1
Q ss_pred CCceEEEeecCHHhHhhHHHHHhh--cCceeecCCcccCC--------CCh---hhHHHHHHHHHHHHHHcCCCEEEhhh
Q 016513 111 KNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLGME--------IPV---EKIFLAQKMMIYKCNLVGKPVVTATQ 177 (388)
Q Consensus 111 ~~~~IiakIEt~~av~nldeI~~~--~Dgi~igrgDLg~e--------~~~---~~v~~~qk~ii~~c~~~gkpvi~atq 177 (388)
.++.|++||||++|++|+++|+++ +|+++||++||+.+ +|. +.+..++++++.+|+++|||++..+
T Consensus 176 ~~i~vi~mIEt~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~- 254 (339)
T 1izc_A 176 NHVCIIPQIESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA- 254 (339)
T ss_dssp HHCEEEEEECSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC-
T ss_pred cCceEEEEEChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec-
Confidence 247899999999999999999975 89999999999999 886 7899999999999999999997643
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCC--CCCHHHHHHHHHHHHHHHhcc
Q 016513 178 MLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAA--GAYPEIAVKIMRRICIEAESS 236 (388)
Q Consensus 178 ~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~--G~~P~~~v~~~~~i~~~aE~~ 236 (388)
+.| .++.+++.+|+|+++++.++.. +.| .+.++++++|+.++|..
T Consensus 255 --------~d~-----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 255 --------LSV-----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQ 301 (339)
T ss_dssp --------SSG-----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC-
T ss_pred --------CCH-----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 233 5678999999999999999876 566 68899999999888864
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.76 E-value=2.5e-20 Score=178.49 Aligned_cols=129 Identities=16% Similarity=0.193 Sum_probs=110.0
Q ss_pred hhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHcc---------------------------CCCCceEEEeecCH
Q 016513 70 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP---------------------------HAKNIQLMSKVENQ 122 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~---------------------------~~~~~~IiakIEt~ 122 (388)
..|..+| +++++.|+++|++|||+|++|++++++.+.. .+.++.+++||||+
T Consensus 77 ~~~~~~i-~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~ 155 (267)
T 2vws_A 77 EGSKPLI-KQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESK 155 (267)
T ss_dssp SCCHHHH-HHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSH
T ss_pred CCCHHHH-HHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCH
Confidence 3467888 9999999999999999999999999988731 11247899999999
Q ss_pred HhHhhHHHHHhh--cCceeecCCcccCCCCh------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHH
Q 016513 123 EGVVNFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEAT 194 (388)
Q Consensus 123 ~av~nldeI~~~--~Dgi~igrgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~ 194 (388)
+|++|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..| .
T Consensus 156 ~av~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~---------~d~-----~ 221 (267)
T 2vws_A 156 TALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA---------VAP-----D 221 (267)
T ss_dssp HHHHTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC---------SSH-----H
T ss_pred HHHHHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec---------CCH-----H
Confidence 999999999987 89999999999999986 6799999999999999999998721 123 2
Q ss_pred HHHHHHHcCCceeEecccc
Q 016513 195 DVANAVLDGTDCVMLSGES 213 (388)
Q Consensus 195 dv~~av~~g~d~i~Ls~et 213 (388)
....++.+|++.+..+.++
T Consensus 222 ~a~~~~~~G~~~~s~~~d~ 240 (267)
T 2vws_A 222 MAQQCLAWGANFVAVGVDT 240 (267)
T ss_dssp HHHHHHHTTCCEEEEEEHH
T ss_pred HHHHHHHCCCCEEEEchHH
Confidence 4467889999999998764
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.76 E-value=5.2e-19 Score=171.07 Aligned_cols=129 Identities=13% Similarity=0.148 Sum_probs=109.7
Q ss_pred hhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHcc-----C----------------------CCCceEEEeecCH
Q 016513 70 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP-----H----------------------AKNIQLMSKVENQ 122 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~-----~----------------------~~~~~IiakIEt~ 122 (388)
+.|..+| +++++.|+++|++|||+|++|++++++.+.. + +.++.+++||||+
T Consensus 98 ~~d~~di-~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~ 176 (287)
T 2v5j_A 98 WNDPVQI-KQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETR 176 (287)
T ss_dssp SSCHHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSH
T ss_pred CCCHHHH-HHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcH
Confidence 4566788 9999999999999999999999999987631 1 2247899999999
Q ss_pred HhHhhHHHHHhh--cCceeecCCcccCCCCh------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHH
Q 016513 123 EGVVNFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEAT 194 (388)
Q Consensus 123 ~av~nldeI~~~--~Dgi~igrgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~ 194 (388)
+|++|+++|+++ +|+++||++||+.++|. +++..++++++.+|+++|||+++. ...|.
T Consensus 177 ~av~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~---------~~d~~----- 242 (287)
T 2v5j_A 177 EAMKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL---------IANEQ----- 242 (287)
T ss_dssp HHHHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE---------CCCHH-----
T ss_pred HHHHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe---------cCCHH-----
Confidence 999999999985 79999999999999986 679999999999999999999862 12332
Q ss_pred HHHHHHHcCCceeEecccc
Q 016513 195 DVANAVLDGTDCVMLSGES 213 (388)
Q Consensus 195 dv~~av~~g~d~i~Ls~et 213 (388)
....++.+|++.+..+.++
T Consensus 243 ~a~~~~~~G~~~~s~~~d~ 261 (287)
T 2v5j_A 243 LAKRYLELGALFVAVGVDT 261 (287)
T ss_dssp HHHHHHHTTCSEEEEEEHH
T ss_pred HHHHHHHhCCCEEEECcHH
Confidence 3466889999999998774
No 14
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.73 E-value=4.7e-18 Score=161.71 Aligned_cols=129 Identities=19% Similarity=0.225 Sum_probs=110.7
Q ss_pred hhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHcc--------------------------CCCCceEEEeecCHH
Q 016513 70 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP--------------------------HAKNIQLMSKVENQE 123 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~--------------------------~~~~~~IiakIEt~~ 123 (388)
+.|..+| +.+++.|+++|++|||+|++|++++++.+.. .+.++.++++|||++
T Consensus 78 ~~~~~~i-~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~ 156 (256)
T 1dxe_A 78 TNEPVII-KRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQ 156 (256)
T ss_dssp SSCHHHH-HHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHH
T ss_pred CCCHHHH-HHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHH
Confidence 4566778 8999999999999999999999999998841 135688999999999
Q ss_pred hHhhHHHHHhh--cCceeecCCcccCCCCh------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHH
Q 016513 124 GVVNFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATD 195 (388)
Q Consensus 124 av~nldeI~~~--~Dgi~igrgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~d 195 (388)
|++|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..| .+
T Consensus 157 av~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~---------~d~-----~~ 222 (256)
T 1dxe_A 157 GVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA---------PVE-----AD 222 (256)
T ss_dssp HHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC---------CSH-----HH
T ss_pred HHHhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec---------CCH-----HH
Confidence 99999999984 79999999999999986 5799999999999999999998621 122 24
Q ss_pred HHHHHHcCCceeEecccc
Q 016513 196 VANAVLDGTDCVMLSGES 213 (388)
Q Consensus 196 v~~av~~g~d~i~Ls~et 213 (388)
...++..|++.+..+.++
T Consensus 223 ~~~~~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 223 ARRYLEWGATFVAVGSDL 240 (256)
T ss_dssp HHHHHHTTCCEEEEEEHH
T ss_pred HHHHHHcCCCEEEechHH
Confidence 467889999999998774
No 15
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.73 E-value=4.7e-18 Score=162.27 Aligned_cols=134 Identities=16% Similarity=0.244 Sum_probs=113.2
Q ss_pred ccCCCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHcc---------------------------CCCCceE
Q 016513 63 VDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGP---------------------------HAKNIQL 115 (388)
Q Consensus 63 ~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~---------------------------~~~~~~I 115 (388)
+++|.. |..|| +++++.|+|+|++|||+|++|++++++.++. .+.++.+
T Consensus 71 VRVn~~---~~~di-~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v 146 (261)
T 3qz6_A 71 VRIPQV---DRAHV-QRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFI 146 (261)
T ss_dssp EECSSC---CHHHH-HHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEE
T ss_pred EEeCCC---CHHHH-HHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEE
Confidence 556654 44688 9999999999999999999999999998731 1346899
Q ss_pred EEeecCHHhHhhHHHHHhh--cCceeecCCcccCCCCh------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCC
Q 016513 116 MSKVENQEGVVNFDDILRE--TDSFMVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPR 187 (388)
Q Consensus 116 iakIEt~~av~nldeI~~~--~Dgi~igrgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ 187 (388)
+++|||++|+.|+++|+++ .|++++|++||+.++|. +.+..++++++.+|+++|||+++.+ ..
T Consensus 147 ~~mIEt~~av~~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~ 217 (261)
T 3qz6_A 147 MAQIEHVKAVEDIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AA 217 (261)
T ss_dssp EEEECCHHHHHTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SS
T ss_pred EEEECCHHHHHHHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CC
Confidence 9999999999999999965 79999999999999986 4799999999999999999998743 24
Q ss_pred CChHHHHHHHHHHHcCCceeEecccc
Q 016513 188 PTRAEATDVANAVLDGTDCVMLSGES 213 (388)
Q Consensus 188 ptraEv~dv~~av~~g~d~i~Ls~et 213 (388)
|..++ ...+..|++.+.++.|+
T Consensus 218 ~~~~~----~~~~~~G~~~~s~~~D~ 239 (261)
T 3qz6_A 218 DAAKM----GWAVERGAQMLLWSGDV 239 (261)
T ss_dssp CGGGG----HHHHHTTCCEEEEEEHH
T ss_pred HHHHH----HHHHHCCCCEEEEhhHH
Confidence 54442 34588999999999885
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.66 E-value=2e-16 Score=152.50 Aligned_cols=140 Identities=14% Similarity=0.201 Sum_probs=113.8
Q ss_pred cccCCCCC-hhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh--hcCce
Q 016513 62 VVDLPTLT-EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR--ETDSF 138 (388)
Q Consensus 62 ~~~~~~lt-~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--~~Dgi 138 (388)
-++++.++ +++..|| +.+++ |+++|++|||+|++|++.+++.+...|.++.++++|||++|+.|+++|++ .+|++
T Consensus 72 ~VRv~~~~~~~~~~dl-~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l 149 (284)
T 1sgj_A 72 FVRVNALHSPYFEDDL-SVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWA 149 (284)
T ss_dssp EEECCCTTSTTHHHHG-GGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEE
T ss_pred EEEeCCCCCHhHHHHH-HHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEE
Confidence 35666666 6778899 99999 99999999999999999999999876678999999999999999999996 37999
Q ss_pred eecCCcccCCCCh------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 139 MVARGDLGMEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 139 ~igrgDLg~e~~~------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
++|++||+.++|. +.+..++++++.+|+++|||++.. +.....-...-..+...+...|+|+=+.
T Consensus 150 ~iG~~DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 150 YFGAEDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDI------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp EECHHHHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EECHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 9999999999987 679999999999999999999632 0000000011114567788999986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.48 E-value=4.4e-14 Score=138.66 Aligned_cols=133 Identities=19% Similarity=0.162 Sum_probs=109.1
Q ss_pred CChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHc-----------cCCCCceEEEeecCHHhHhhHHHHHhhcC
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLG-----------PHAKNIQLMSKVENQEGVVNFDDILRETD 136 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~-----------~~~~~~~IiakIEt~~av~nldeI~~~~D 136 (388)
+...|...| ..+++.|.+.|++|||+|++|++++++++. ..|.++.++++|||+.|+.|+|+|++.+|
T Consensus 120 ~~~~ql~Ai-~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~vD 198 (324)
T 2xz9_A 120 IFKTQLRAI-LRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKEVD 198 (324)
T ss_dssp HHHHHHHHH-HHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTTCS
T ss_pred hHHHHHHHH-HHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCc
Confidence 344455788 889999999999999999999888888774 12346899999999999999999999999
Q ss_pred ceeecCCcccCC-CC---------------hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHH
Q 016513 137 SFMVARGDLGME-IP---------------VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAV 200 (388)
Q Consensus 137 gi~igrgDLg~e-~~---------------~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av 200 (388)
+++||+.||+.. ++ .+.+..+.++++.+|+++|||+++++++- ..| ..+..++
T Consensus 199 ~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~------~dp-----~~~~~l~ 267 (324)
T 2xz9_A 199 FFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMA------GDP-----LAAVILL 267 (324)
T ss_dssp EEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCH-----HHHHHHH
T ss_pred EEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccC------CCH-----HHHHHHH
Confidence 999999999963 33 25788999999999999999999987642 123 3446688
Q ss_pred HcCCceeEeccc
Q 016513 201 LDGTDCVMLSGE 212 (388)
Q Consensus 201 ~~g~d~i~Ls~e 212 (388)
..|+|.+..+.+
T Consensus 268 ~lG~~~~si~p~ 279 (324)
T 2xz9_A 268 GLGLDEFSMSAT 279 (324)
T ss_dssp HHTCCEEEECGG
T ss_pred HCCCCEEEEChh
Confidence 899999777644
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.42 E-value=3.9e-13 Score=131.53 Aligned_cols=138 Identities=17% Similarity=0.247 Sum_probs=110.6
Q ss_pred ccccCCCCC-hhCHHHHHhccccCCC--CEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh---
Q 016513 61 VVVDLPTLT-EKDKEDILRWGVPNNI--DMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--- 134 (388)
Q Consensus 61 ~~~~~~~lt-~~D~~di~~~~l~~g~--d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--- 134 (388)
.-++++.+. ++-..|| +..++.|. |+|++|+|++++|++.+.+.+...+.++.++++|||++|+.|+++|++.
T Consensus 104 ~~VRVn~~~t~~~~~Dl-~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~ 182 (316)
T 3qll_A 104 LALRINGLDTRAGIEDI-HALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPK 182 (316)
T ss_dssp EEEECCCTTSHHHHHHH-HHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTT
T ss_pred EEEEECCCCCchhHHHH-HHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCC
Confidence 345666664 4556788 88888875 9999999999999999999998877789999999999999999999983
Q ss_pred cCceeecCCcccCCCCh----hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChH--H--HHHHHHHHHcCCce
Q 016513 135 TDSFMVARGDLGMEIPV----EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRA--E--ATDVANAVLDGTDC 206 (388)
Q Consensus 135 ~Dgi~igrgDLg~e~~~----~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptra--E--v~dv~~av~~g~d~ 206 (388)
.|++++|+.||+.++|. +.+..+..+++.+|+++|++++.. +.+... | ..++..+...|+++
T Consensus 183 v~~l~~G~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~----------v~~~~~D~~gl~~e~~~~r~lGf~G 252 (316)
T 3qll_A 183 LAGLIFGAADMAADIGAASTWEPLALARARLVSACAMNGIPAIDA----------PFFDVHDVSGLQSETLRASDFGFSA 252 (316)
T ss_dssp EEEEEECHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC----------CCSCSSCHHHHHHHHHHHHHHTCCE
T ss_pred ceEEEECHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec----------cccCcCCHHHHHHHHHHHHHCCCCe
Confidence 58999999999998875 468889999999999999998542 112111 1 35677788999987
Q ss_pred eEe
Q 016513 207 VML 209 (388)
Q Consensus 207 i~L 209 (388)
=+.
T Consensus 253 k~~ 255 (316)
T 3qll_A 253 KAA 255 (316)
T ss_dssp EEE
T ss_pred EEe
Confidence 555
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.34 E-value=1.8e-12 Score=124.35 Aligned_cols=132 Identities=14% Similarity=0.137 Sum_probs=103.2
Q ss_pred cccCCCCC-hhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh--cCce
Q 016513 62 VVDLPTLT-EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--TDSF 138 (388)
Q Consensus 62 ~~~~~~lt-~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--~Dgi 138 (388)
-++++.+. ++-..|+ +..++.|+++|++|+|++++|++.+. ++.++++|||++|+.|+++|+.. .|++
T Consensus 62 ~VRVn~~~~~~~~~dl-~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l 132 (273)
T 1u5h_A 62 VVRINAGGTADQARDL-EALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGM 132 (273)
T ss_dssp EEECCCTTCHHHHHHH-HHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEE
T ss_pred EEEECCCCchHHHHHH-HHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEE
Confidence 35666655 3345778 88889999999999999999999763 67899999999999999999964 5899
Q ss_pred eecCCcccCCCCh-----------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHH-HHHHHHHHHcCCce
Q 016513 139 MVARGDLGMEIPV-----------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE-ATDVANAVLDGTDC 206 (388)
Q Consensus 139 ~igrgDLg~e~~~-----------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraE-v~dv~~av~~g~d~ 206 (388)
++|+.||+.++|. +.+..+..+++.+|+++|++++... .....+.+- ..+...+...|+|+
T Consensus 133 ~~G~~Dl~~~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~v-------~~~~~d~~gl~~~~~~~~~~Gf~G 205 (273)
T 1u5h_A 133 MWGAEDLIATLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDAV-------HLDILDVEGLQEEARDAAAVGFDV 205 (273)
T ss_dssp EECHHHHHHHHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEECC-------CSCTTCHHHHHHHHHHHHHHTCSE
T ss_pred EecHHHHHHHhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccCC-------cCCCCCHHHHHHHHHHHHhCCCCc
Confidence 9999999988874 2478899999999999999986421 111111111 14677888999998
Q ss_pred eEe
Q 016513 207 VML 209 (388)
Q Consensus 207 i~L 209 (388)
-+.
T Consensus 206 k~~ 208 (273)
T 1u5h_A 206 TVC 208 (273)
T ss_dssp EEE
T ss_pred eee
Confidence 777
No 20
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.29 E-value=3.3e-12 Score=138.79 Aligned_cols=135 Identities=19% Similarity=0.192 Sum_probs=113.3
Q ss_pred CChhCHHHHHhcccc-CC--CCEEEeCCCCChhhHHHHHHHHccCC----CC-ceEEEeecCHHhHhhHHHHHhhcCcee
Q 016513 68 LTEKDKEDILRWGVP-NN--IDMIALSFVRKGSDLVNVRKVLGPHA----KN-IQLMSKVENQEGVVNFDDILRETDSFM 139 (388)
Q Consensus 68 lt~~D~~di~~~~l~-~g--~d~v~~sfV~sa~dv~~v~~~l~~~~----~~-~~IiakIEt~~av~nldeI~~~~Dgi~ 139 (388)
+.+.+.+.| ..+.+ +| .+.|++|||++++|++.+++.+...| .+ +.++++||+++|+.|+|+|++.+|++.
T Consensus 622 ~~~~ql~Ai-~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~s 700 (794)
T 2ols_A 622 CFALECKAL-KRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFS 700 (794)
T ss_dssp HHHHHHHHH-HHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEE
T ss_pred HHHHHHHHH-HHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 455677888 78888 68 79999999999999999999997554 23 889999999999999999999999999
Q ss_pred ecCCcccCC-CCh---------------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcC
Q 016513 140 VARGDLGME-IPV---------------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 203 (388)
Q Consensus 140 igrgDLg~e-~~~---------------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g 203 (388)
||+.||+.. ++. +.+..+.++++.+|+++|||++++.|+--. .|. .+..++..|
T Consensus 701 iGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~-----dp~-----~~~~~~~~G 770 (794)
T 2ols_A 701 IGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSD-----HPD-----FAKWLVEEG 770 (794)
T ss_dssp EEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHH-----CHH-----HHHHHHHHT
T ss_pred ECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCC-----CHH-----HHHHHHHCC
Confidence 999999987 663 468899999999999999999998875420 121 246688999
Q ss_pred CceeEecccc
Q 016513 204 TDCVMLSGES 213 (388)
Q Consensus 204 ~d~i~Ls~et 213 (388)
+|.+.++.+.
T Consensus 771 ~~~~s~~p~~ 780 (794)
T 2ols_A 771 IESVSLNPDT 780 (794)
T ss_dssp CCEEEECGGG
T ss_pred CCEEEECHhH
Confidence 9999987553
No 21
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.26 E-value=7.3e-12 Score=123.30 Aligned_cols=140 Identities=11% Similarity=0.018 Sum_probs=103.8
Q ss_pred cccCCCCC-hhCHHHHHhccccC---CCCEEEeCCCCChhhHHHHHHHHccC----C--CCceEEEeecCHHhHhhHHHH
Q 016513 62 VVDLPTLT-EKDKEDILRWGVPN---NIDMIALSFVRKGSDLVNVRKVLGPH----A--KNIQLMSKVENQEGVVNFDDI 131 (388)
Q Consensus 62 ~~~~~~lt-~~D~~di~~~~l~~---g~d~v~~sfV~sa~dv~~v~~~l~~~----~--~~~~IiakIEt~~av~nldeI 131 (388)
-++++.+. ++-..|| ...++. |+|+|++|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|
T Consensus 86 ~VRIN~~~t~~~~~DL-~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eI 164 (332)
T 3qqw_A 86 GARIHDPSHPAWRQDV-DIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQI 164 (332)
T ss_dssp EEECCCTTSTTHHHHH-HHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHH
T ss_pred EEEECCCCChHHHHHH-HHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHH
Confidence 34555443 3345666 655664 99999999999999999999988532 2 468899999999999999999
Q ss_pred Hhh--cCceeecCCcccCCCCh---------------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHH-H
Q 016513 132 LRE--TDSFMVARGDLGMEIPV---------------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE-A 193 (388)
Q Consensus 132 ~~~--~Dgi~igrgDLg~e~~~---------------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraE-v 193 (388)
++. .|++++|+.||+.+++. +.+..++.+++.+|+++|++++..- .+-.....- .
T Consensus 165 aa~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~v-------~~d~~D~~gl~ 237 (332)
T 3qqw_A 165 AELPNIEVLDFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHNV-------CLNLKDAEVIA 237 (332)
T ss_dssp TTSTTEEEEEECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEECC-------CSCSSCHHHHH
T ss_pred hcCcCCCEEEEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccCC-------cccccCHHHHH
Confidence 954 58999999999888764 2367889999999999999986421 111111111 1
Q ss_pred HHHHHHH-HcCCceeEe
Q 016513 194 TDVANAV-LDGTDCVML 209 (388)
Q Consensus 194 ~dv~~av-~~g~d~i~L 209 (388)
.+...+. ..|+|+-+.
T Consensus 238 ~~~~~~~~~lGf~Gk~~ 254 (332)
T 3qqw_A 238 SDACRARNEFGFLRMWS 254 (332)
T ss_dssp HHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHhCCCCcccc
Confidence 4566777 789997655
No 22
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.25 E-value=1.3e-11 Score=129.30 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=107.8
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHc-------c----CCCCceEEEeecCHHhHhhHHHHHhhcCceee
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLG-------P----HAKNIQLMSKVENQEGVVNFDDILRETDSFMV 140 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~-------~----~~~~~~IiakIEt~~av~nldeI~~~~Dgi~i 140 (388)
+...| ..+.+.|...|++|||+++++++.+++++. + .+.++.+.+|||+|.|+.++|+|++.+|++.|
T Consensus 373 QlrAi-~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~si 451 (575)
T 2hwg_A 373 QLRAI-LRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSI 451 (575)
T ss_dssp HHHHH-HHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEEEE
T ss_pred HHHHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 33667 888899999999999999999888888773 1 23468899999999999999999999999999
Q ss_pred cCCcccC----------CCCh------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCC
Q 016513 141 ARGDLGM----------EIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGT 204 (388)
Q Consensus 141 grgDLg~----------e~~~------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~ 204 (388)
|..||+. .++. +.|..+.++++.+|+++|||++++.++ ...|..+ ...+..|+
T Consensus 452 GtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~------agdp~~~-----~~l~~lG~ 520 (575)
T 2hwg_A 452 GTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGEL------AGDERAT-----LLLLGMGL 520 (575)
T ss_dssp CHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTT------TTCTTTH-----HHHHHTTC
T ss_pred CHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCC------CCCHHHH-----HHHHHCCC
Confidence 9999998 5442 678999999999999999999998762 2355444 66889999
Q ss_pred ceeEeccc
Q 016513 205 DCVMLSGE 212 (388)
Q Consensus 205 d~i~Ls~e 212 (388)
|.+..+..
T Consensus 521 ~~~S~~p~ 528 (575)
T 2hwg_A 521 DEFSMSAI 528 (575)
T ss_dssp CEEEECGG
T ss_pred CEEEECcc
Confidence 99877754
No 23
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.21 E-value=1.8e-11 Score=128.09 Aligned_cols=126 Identities=18% Similarity=0.088 Sum_probs=105.8
Q ss_pred HHHHhccccCCCCEEEeCCCCChhhHHHHHHHHc-----------cCCCCceEEEeecCHHhHhhHHHHHhhcCceeecC
Q 016513 74 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLG-----------PHAKNIQLMSKVENQEGVVNFDDILRETDSFMVAR 142 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~-----------~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igr 142 (388)
..| ..+.+.|...|++|||+++++++++++++. ..++++.+.+|||+|.|+.++|+|++.+|++.||.
T Consensus 377 rAi-~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGt 455 (572)
T 2wqd_A 377 RAL-LRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGT 455 (572)
T ss_dssp HHH-HHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEECH
T ss_pred HHH-HHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEECH
Confidence 567 788899999999999999999999888773 12346899999999999999999999999999999
Q ss_pred CcccCC-CC---------------hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCce
Q 016513 143 GDLGME-IP---------------VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDC 206 (388)
Q Consensus 143 gDLg~e-~~---------------~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~ 206 (388)
.||+.- ++ .+.|..+.++++.+|+++|||++++.++- ..|..+ ...+..|+|.
T Consensus 456 NDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~a------gdp~~~-----~~l~~lG~~~ 524 (572)
T 2wqd_A 456 NDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMA------GDETAI-----PLLLGLGLDE 524 (572)
T ss_dssp HHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGG------GCTTTH-----HHHHHHTCCE
T ss_pred HHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCcc------CCHHHH-----HHHHHCCCCE
Confidence 999842 11 25788999999999999999999987632 356555 6678999999
Q ss_pred eEecc
Q 016513 207 VMLSG 211 (388)
Q Consensus 207 i~Ls~ 211 (388)
+..+.
T Consensus 525 ~S~~p 529 (572)
T 2wqd_A 525 FSMSA 529 (572)
T ss_dssp EEECH
T ss_pred EEecc
Confidence 98773
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.18 E-value=4.7e-11 Score=117.79 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=99.2
Q ss_pred ccCCCCCh-hCHHHHHhccccC---CCCEEEeCCCCChhhHHHHHHHHccC----C--CCceEEEeecCHHhHhhHHHHH
Q 016513 63 VDLPTLTE-KDKEDILRWGVPN---NIDMIALSFVRKGSDLVNVRKVLGPH----A--KNIQLMSKVENQEGVVNFDDIL 132 (388)
Q Consensus 63 ~~~~~lt~-~D~~di~~~~l~~---g~d~v~~sfV~sa~dv~~v~~~l~~~----~--~~~~IiakIEt~~av~nldeI~ 132 (388)
++++.+.. +-..|| ...++. |+|+|++|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|+
T Consensus 86 VRIN~~dt~~~~~DL-~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIA 164 (339)
T 3r4i_A 86 VRIHDFDHAHWRDDV-RLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLA 164 (339)
T ss_dssp EECCCTTSTTHHHHH-HHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHH
T ss_pred EEECCCCccHHHHHH-HHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHH
Confidence 44444332 335566 555553 89999999999999999999887532 2 3688999999999999999999
Q ss_pred hh--cCceeecCCcccCCCCh---------------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCCh---H-
Q 016513 133 RE--TDSFMVARGDLGMEIPV---------------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTR---A- 191 (388)
Q Consensus 133 ~~--~Dgi~igrgDLg~e~~~---------------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptr---a- 191 (388)
+. .|++++|..||+.+++. +.+..++.+++.+|+++|++++.. +.+.. +
T Consensus 165 a~~rv~~L~~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~----------v~~d~~D~~g 234 (339)
T 3r4i_A 165 ALPGVEALSFGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN----------VSTEVRDMSV 234 (339)
T ss_dssp TCTTEEEEEECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC----------CCCCSSCHHH
T ss_pred cCcCCCEEEECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC----------CCcCCCChHH
Confidence 54 68999999999988863 126778899999999999998642 12211 1
Q ss_pred HHHHHHHHH-HcCCceeEe
Q 016513 192 EATDVANAV-LDGTDCVML 209 (388)
Q Consensus 192 Ev~dv~~av-~~g~d~i~L 209 (388)
-..+...+. ..|+|+-+.
T Consensus 235 l~~~~~~~~~~lGf~Gk~~ 253 (339)
T 3r4i_A 235 VANDAARARNEFGYTRMWS 253 (339)
T ss_dssp HHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHhCCCCccee
Confidence 113455665 689997555
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=99.02 E-value=2.4e-10 Score=115.03 Aligned_cols=130 Identities=8% Similarity=-0.025 Sum_probs=101.8
Q ss_pred CHHHHHhcccc------CCCCEEEeCCCCChhhHHHHHHHHccC----C---CCceEEEeecCHHh---HhhHHHHHhhc
Q 016513 72 DKEDILRWGVP------NNIDMIALSFVRKGSDLVNVRKVLGPH----A---KNIQLMSKVENQEG---VVNFDDILRET 135 (388)
Q Consensus 72 D~~di~~~~l~------~g~d~v~~sfV~sa~dv~~v~~~l~~~----~---~~~~IiakIEt~~a---v~nldeI~~~~ 135 (388)
...|| ...+. .++|+|++|++++++|++.+.+.+... | ..+.++++|||++| +.|+++|+.++
T Consensus 98 ~~~DL-~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIAaas 176 (433)
T 3oyz_A 98 GFQHM-LDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEMGKP 176 (433)
T ss_dssp HHHHH-HHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHHHCT
T ss_pred cHHHH-HHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHHhhh
Confidence 46677 66665 689999999999999999998887532 2 25789999999999 99999999863
Q ss_pred -------CceeecCCcccCCCChh-------hHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHH-HHHHHHHH
Q 016513 136 -------DSFMVARGDLGMEIPVE-------KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE-ATDVANAV 200 (388)
Q Consensus 136 -------Dgi~igrgDLg~e~~~~-------~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraE-v~dv~~av 200 (388)
+|+++|+.||+.++|.. .+..+..+++.+|+++|++++..- .+..-..+- ..+...+.
T Consensus 177 r~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDgV-------~~di~D~egL~~ea~~ar 249 (433)
T 3oyz_A 177 TNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDGP-------YDDIRDVEGYRERMTDNQ 249 (433)
T ss_dssp TCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEECC-------CCCTTCHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCccccc-------ccCCCCHHHHHHHHHHHH
Confidence 69999999999888752 477889999999999999986421 111111111 14778888
Q ss_pred HcCCceeEe
Q 016513 201 LDGTDCVML 209 (388)
Q Consensus 201 ~~g~d~i~L 209 (388)
..|+|+-+.
T Consensus 250 ~lGF~GK~~ 258 (433)
T 3oyz_A 250 AKGMLGIWS 258 (433)
T ss_dssp TTTCCEEEE
T ss_pred hCCCCceEe
Confidence 999998776
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.59 E-value=4e-08 Score=107.40 Aligned_cols=136 Identities=17% Similarity=0.124 Sum_probs=103.2
Q ss_pred CCCChhCHHHHHhccc----cCCCC---EEEeCCCCChhhHHHHHHHHcc--------CC--CCceEEEeecCHHhHhhH
Q 016513 66 PTLTEKDKEDILRWGV----PNNID---MIALSFVRKGSDLVNVRKVLGP--------HA--KNIQLMSKVENQEGVVNF 128 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l----~~g~d---~v~~sfV~sa~dv~~v~~~l~~--------~~--~~~~IiakIEt~~av~nl 128 (388)
|.+.+-..+.| ..|. +.|.+ .|++|||++++|++.+++++.+ .| .++.+.++||++.|+.|+
T Consensus 680 peif~~QlrAi-~~Aa~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~a 758 (876)
T 1vbg_A 680 PELTEMQARAI-FEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVA 758 (876)
T ss_dssp HHHHHHHHHHH-HHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTH
T ss_pred hHHHHHHHHHH-HHHHHHHHhcCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHH
Confidence 34444444555 3222 23755 6999999999999999987642 13 358899999999999999
Q ss_pred HHHHhhcCceeecCCccc-CCCCh----------------------------hhHHHHHHHHHHHHHHc--CCCEEEhhh
Q 016513 129 DDILRETDSFMVARGDLG-MEIPV----------------------------EKIFLAQKMMIYKCNLV--GKPVVTATQ 177 (388)
Q Consensus 129 deI~~~~Dgi~igrgDLg-~e~~~----------------------------~~v~~~qk~ii~~c~~~--gkpvi~atq 177 (388)
++|++.+|++.||..||. ..++. +.|..+.++++++|+++ |||++++.|
T Consensus 759 deIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe 838 (876)
T 1vbg_A 759 DEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGE 838 (876)
T ss_dssp HHHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESG
T ss_pred HHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCC
Confidence 999999999999999988 22332 45778889999999998 999999887
Q ss_pred HHHHhhcCCCCChHHHHHHHHHHHcCCceeEecccc
Q 016513 178 MLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES 213 (388)
Q Consensus 178 ~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~et 213 (388)
+= ..|.-+ .-.+..|.|-+-.|...
T Consensus 839 ~~------gdP~~~-----~~l~~~Gl~~vS~sp~~ 863 (876)
T 1vbg_A 839 HG------GEPSSV-----AFFAKAGLDYVSCSPFR 863 (876)
T ss_dssp GG------GSHHHH-----HHHHHTTCSEEEECGGG
T ss_pred cC------CCHHHH-----HHHHHcCCCEEEECcch
Confidence 43 244433 66789999999888553
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.48 E-value=1.2e-07 Score=103.46 Aligned_cols=118 Identities=19% Similarity=0.165 Sum_probs=95.6
Q ss_pred CCC---EEEeCCCCChhhHHHHHHHHcc--------CC--CCceEEEeecCHHhHhhHHHHHhhcCceeecCCccc-CCC
Q 016513 84 NID---MIALSFVRKGSDLVNVRKVLGP--------HA--KNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG-MEI 149 (388)
Q Consensus 84 g~d---~v~~sfV~sa~dv~~v~~~l~~--------~~--~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg-~e~ 149 (388)
|.+ .|++|||++++|++.+++++.+ .| .++.+.++||+|.|+.++++|++.+|++.||..||. ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 754 7999999999999999987742 13 357899999999999999999999999999999988 333
Q ss_pred Ch----------------------------hhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHH
Q 016513 150 PV----------------------------EKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANA 199 (388)
Q Consensus 150 ~~----------------------------~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~a 199 (388)
+. +.|..+.++++++|+++ |+|++++.|+= ..|.-+ .-.
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~------gdP~~~-----~~l 843 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHG------GDPSSV-----EFC 843 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGG------GSHHHH-----HHH
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCC------CCHHHH-----HHH
Confidence 32 34677888999999997 99999988743 244333 567
Q ss_pred HHcCCceeEeccc
Q 016513 200 VLDGTDCVMLSGE 212 (388)
Q Consensus 200 v~~g~d~i~Ls~e 212 (388)
+..|.|-+-.|..
T Consensus 844 ~~~Gl~~vS~sp~ 856 (873)
T 1kbl_A 844 HKVGLNYVSCSPF 856 (873)
T ss_dssp HHTTCSEEEECGG
T ss_pred HHcCCCEEEEChh
Confidence 8999999988854
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=98.18 E-value=1.1e-05 Score=83.57 Aligned_cols=119 Identities=15% Similarity=0.123 Sum_probs=87.7
Q ss_pred CCEEEeCCCCChhhHHHHHHHHcc----CC---CCceEEEeecCHHhHhhHHHHHhh-c---CceeecCCcccCCCCh--
Q 016513 85 IDMIALSFVRKGSDLVNVRKVLGP----HA---KNIQLMSKVENQEGVVNFDDILRE-T---DSFMVARGDLGMEIPV-- 151 (388)
Q Consensus 85 ~d~v~~sfV~sa~dv~~v~~~l~~----~~---~~~~IiakIEt~~av~nldeI~~~-~---Dgi~igrgDLg~e~~~-- 151 (388)
.++|.+|++++++|++.+.+.+.. .| ..++++++|||+.|+.|++||+.. + .|+..|+.|+..++..
T Consensus 207 g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~i~~~ 286 (532)
T 3cuz_A 207 GPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTL 286 (532)
T ss_dssp CCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHHHHHT
T ss_pred CCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHHHhhc
Confidence 499999999999999999888742 12 257899999999999999999975 4 4999999998876610
Q ss_pred -----------------hhHHHHHHHHH-HHHHHcCCCEEE--hhhHHHHhhcCCCCChH--------HHHHHHHHHHcC
Q 016513 152 -----------------EKIFLAQKMMI-YKCNLVGKPVVT--ATQMLESMIKSPRPTRA--------EATDVANAVLDG 203 (388)
Q Consensus 152 -----------------~~v~~~qk~ii-~~c~~~gkpvi~--atq~lesM~~~~~ptra--------Ev~dv~~av~~g 203 (388)
..+..+..+++ .+|+++|++.|. +- ..|.-..+ =..|...+..+|
T Consensus 287 ~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a-------~~p~kD~e~~~~~~~~l~~dk~~~~~~G 359 (532)
T 3cuz_A 287 KNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAA-------FIPSKDEEHNNQVLNKVKADKSLEANNG 359 (532)
T ss_dssp TTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEC-------BCCCSSGGGCHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCccc-------cCCCCChhHHHHHHHHHHHHHHHHHHCC
Confidence 12455555555 999999998875 21 11211111 125677788999
Q ss_pred CceeEec
Q 016513 204 TDCVMLS 210 (388)
Q Consensus 204 ~d~i~Ls 210 (388)
+|+-+.-
T Consensus 360 fdGkwvi 366 (532)
T 3cuz_A 360 HDGTWIA 366 (532)
T ss_dssp CSEEEES
T ss_pred CCccccC
Confidence 9998883
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=98.07 E-value=8.9e-06 Score=84.05 Aligned_cols=121 Identities=17% Similarity=0.155 Sum_probs=89.2
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccC----C---CCceEEEeecCHHhHhhHHHHHhh-c---CceeecCCcccCCCC
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPH----A---KNIQLMSKVENQEGVVNFDDILRE-T---DSFMVARGDLGMEIP 150 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~----~---~~~~IiakIEt~~av~nldeI~~~-~---Dgi~igrgDLg~e~~ 150 (388)
..|+ +|.+|++++++|++.+.+.+... | ..+++.++|||+.|+-|++||+.. . .|+..||.|+..++.
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 3576 99999999999999998887422 2 258999999999999999999965 3 499999999877653
Q ss_pred h--------------------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCCh----------HH-HHHHHHH
Q 016513 151 V--------------------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTR----------AE-ATDVANA 199 (388)
Q Consensus 151 ~--------------------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptr----------aE-v~dv~~a 199 (388)
. +-+....+.++.+|+++|++.|.. |- .+ .|.+ +. ..|-...
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m~-a~----ip~~~D~~~n~~~~~~~~~dk~~~ 353 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--MA-AQ----IPIKNNPEANEAAFEKVRADKERE 353 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC--------------------------CHHHHHHHHH
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--cc-cc----CcCcCChHHHHHHHHHHHHHHHHH
Confidence 1 135556677889999999998752 11 11 2322 12 2566778
Q ss_pred HHcCCceeEec
Q 016513 200 VLDGTDCVMLS 210 (388)
Q Consensus 200 v~~g~d~i~Ls 210 (388)
..+|+||-+.-
T Consensus 354 ~~~GfdGkwvi 364 (528)
T 3cux_A 354 ALDGHDGTWVA 364 (528)
T ss_dssp HHHTCSBEEES
T ss_pred HhCCCCccccc
Confidence 99999999884
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.97 E-value=1.1e-05 Score=85.15 Aligned_cols=135 Identities=12% Similarity=0.097 Sum_probs=95.7
Q ss_pred HHHHHhcccc--CCCCEEEeCCCCChhhHHHHHHHHcc----CC---CCceEEEeecCHHhHhhHHHHHh-hc---Ccee
Q 016513 73 KEDILRWGVP--NNIDMIALSFVRKGSDLVNVRKVLGP----HA---KNIQLMSKVENQEGVVNFDDILR-ET---DSFM 139 (388)
Q Consensus 73 ~~di~~~~l~--~g~d~v~~sfV~sa~dv~~v~~~l~~----~~---~~~~IiakIEt~~av~nldeI~~-~~---Dgi~ 139 (388)
..|+ +..+. .|.++|.+|++++++|++.+.+++.. .| ..+++.++|||+.|+-|++||+. ++ .|+.
T Consensus 372 ~hDl-~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn 450 (731)
T 1p7t_A 372 LYDL-KVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN 450 (731)
T ss_dssp HHHH-HHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEE
T ss_pred HhhH-HHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEE
Confidence 4555 44443 35899999999999999999988742 12 25889999999999999999985 33 4999
Q ss_pred ecCCcccCCC-Ch----------------hhHHHHHHHHHH---HHHHcCCCEEEhhhHHHHhhcCCCCChHHH--HHHH
Q 016513 140 VARGDLGMEI-PV----------------EKIFLAQKMMIY---KCNLVGKPVVTATQMLESMIKSPRPTRAEA--TDVA 197 (388)
Q Consensus 140 igrgDLg~e~-~~----------------~~v~~~qk~ii~---~c~~~gkpvi~atq~lesM~~~~~ptraEv--~dv~ 197 (388)
.|+.|+..++ +. +-+....+..+. +|+++|++.|.- .|-.. |..-|- .|..
T Consensus 451 ~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~--p~dmeg~~~dk~ 523 (731)
T 1p7t_A 451 TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAM--PDLMADMYSQKG 523 (731)
T ss_dssp ECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCC--TTCHHHHHHHTH
T ss_pred cCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccC--hhhHHHHHHHHH
Confidence 9999987774 21 113334455554 899999998751 12222 333222 5667
Q ss_pred HHHHcCCceeEeccccCCCCCHHHH
Q 016513 198 NAVLDGTDCVMLSGESAAGAYPEIA 222 (388)
Q Consensus 198 ~av~~g~d~i~Ls~eta~G~~P~~~ 222 (388)
....+|+||-++ -+|-++
T Consensus 524 ~~~~~GfdGkwV-------iHP~qV 541 (731)
T 1p7t_A 524 DQLRAGANTAWV-------PSPTAA 541 (731)
T ss_dssp HHHHTTCSEEEE-------SSHHHH
T ss_pred HHHhCCCCCccc-------CCHHHH
Confidence 788999999988 467555
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.72 E-value=8.8e-05 Score=81.23 Aligned_cols=138 Identities=17% Similarity=0.114 Sum_probs=105.0
Q ss_pred cCCCCChhCHHHHHhcc----ccCCCC---EEEeCCCCChhhHHHHHHHHc--------cCC--CCceEEEeecCHHhHh
Q 016513 64 DLPTLTEKDKEDILRWG----VPNNID---MIALSFVRKGSDLVNVRKVLG--------PHA--KNIQLMSKVENQEGVV 126 (388)
Q Consensus 64 ~~~~lt~~D~~di~~~~----l~~g~d---~v~~sfV~sa~dv~~v~~~l~--------~~~--~~~~IiakIEt~~av~ 126 (388)
..|.+.+-..+.| ..| .+.|.+ .|++|||.+.++++.+++.+. +.| .++.+-.+||+|.++-
T Consensus 698 ~~peif~~QlrAi-~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal 776 (913)
T 1h6z_A 698 TYPEIYNMQVRAI-IEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAV 776 (913)
T ss_dssp HSTTHHHHHHHHH-HHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHH
T ss_pred CChHHHHHHHHHH-HHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHH
Confidence 4566666666766 443 224644 799999999999999998863 223 3578999999999999
Q ss_pred hHHHHHhhcCceeecCCcccC-----CC-------------------Ch-----hhHHHHHHHHHHHHHH--cCCCEEEh
Q 016513 127 NFDDILRETDSFMVARGDLGM-----EI-------------------PV-----EKIFLAQKMMIYKCNL--VGKPVVTA 175 (388)
Q Consensus 127 nldeI~~~~Dgi~igrgDLg~-----e~-------------------~~-----~~v~~~qk~ii~~c~~--~gkpvi~a 175 (388)
.+|+|++.+|++-||-.||.. +- |+ +.|..+.+..+++|++ +|+|++++
T Consensus 777 ~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgIC 856 (913)
T 1h6z_A 777 TADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGIC 856 (913)
T ss_dssp THHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 999999999999999888643 21 11 4567788899999997 69999999
Q ss_pred hhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecccc
Q 016513 176 TQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES 213 (388)
Q Consensus 176 tq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~et 213 (388)
.|+= ..|.-+ .-.+..|.|-+-.|...
T Consensus 857 GE~~------gdP~~~-----~~l~~~Gid~vS~sp~~ 883 (913)
T 1h6z_A 857 GEHG------GDPATI-----GFCHKVGLDYVSCSPFR 883 (913)
T ss_dssp SGGG------GCHHHH-----HHHHHHTCSEEEECGGG
T ss_pred CCCC------CCHHHH-----HHHHHcCCCEEEECchH
Confidence 8854 235443 66788899999998553
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=97.07 E-value=0.0022 Score=70.60 Aligned_cols=115 Identities=19% Similarity=0.132 Sum_probs=86.0
Q ss_pred EEEeCCCCChhhHHHHHHHHc--------cCC--CCceEEEeecCHHhHhhHHHHHhhcCceeecCCccc-----CCCC-
Q 016513 87 MIALSFVRKGSDLVNVRKVLG--------PHA--KNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG-----MEIP- 150 (388)
Q Consensus 87 ~v~~sfV~sa~dv~~v~~~l~--------~~~--~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg-----~e~~- 150 (388)
.|++|||.+.++++.+++.+. +.| .+..|-.|||+|.++-.+|+|++.+|++=||-.||. ++-.
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999998887652 223 357899999999999999999999999999988863 3221
Q ss_pred ------------------h-----hhHHHHHHHHHHHHHHcC--CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCc
Q 016513 151 ------------------V-----EKIFLAQKMMIYKCNLVG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 205 (388)
Q Consensus 151 ------------------~-----~~v~~~qk~ii~~c~~~g--kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d 205 (388)
+ +-+..+.+..+++|++++ +|++++.|+= ..|.-+ .-.+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~------gdP~~~-----~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHG------GDPATI-----GFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGG------GCHHHH-----HHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCcc------cCHHHH-----HHHHHcCCC
Confidence 0 134455566666666655 5899999853 234433 678899999
Q ss_pred eeEeccc
Q 016513 206 CVMLSGE 212 (388)
Q Consensus 206 ~i~Ls~e 212 (388)
.+-+|..
T Consensus 876 ~~S~sP~ 882 (913)
T 2x0s_A 876 YVSCSPF 882 (913)
T ss_dssp EEEECGG
T ss_pred EEEEChH
Confidence 9999854
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.00 E-value=0.048 Score=56.37 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=83.7
Q ss_pred ChhCHHHHHhccccCCCCEEEeC--CCCChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhhcCceeecCCcc
Q 016513 69 TEKDKEDILRWGVPNNIDMIALS--FVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDL 145 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~s--fV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~Dgi~igrgDL 145 (388)
++.+.+.+ ...+++|+|+|++- +-.+ +.+.+..+.+++...++.||+ -+-|.++.++|-+ +-+|++-+|-|-=
T Consensus 279 ~~d~~eR~-~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpG 354 (556)
T 4af0_A 279 RPGDKDRL-KLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSG 354 (556)
T ss_dssp SHHHHHHH-HHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred CccHHHHH-HHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCC
Confidence 34456666 77789999988763 3333 344455555655556777666 8899999877643 3489999885542
Q ss_pred cCC-------CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 146 GME-------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 146 g~e-------~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
++- +|.+ -..+...+.++|+++|+|+|--.. .- --.|++.|+..|||++||.
T Consensus 355 SiCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIADGG---------I~---~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 355 SICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIADGG---------IG---NIGHIAKALALGASAVMMG 413 (556)
T ss_dssp TTBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEEESC---------CC---SHHHHHHHHHTTCSEEEES
T ss_pred cccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEecCC---------cC---cchHHHHHhhcCCCEEEEc
Confidence 221 1222 344566777889999999884221 11 2379999999999999995
No 34
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=95.64 E-value=0.28 Score=44.13 Aligned_cols=117 Identities=20% Similarity=0.098 Sum_probs=75.1
Q ss_pred hhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccccccccccccEEEEeC
Q 016513 257 LESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAE 336 (388)
Q Consensus 257 ~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~aR~l~l~~GV~P~l~~ 336 (388)
++.....|++-|.+++.+-||+.|.||.||+++...-....+++|--+.=-..+-.|. -....|+..--.|+.-+-..
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e--~~~e~~~~L~~~G~~V~t~t 105 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENT--MPPEVEEELRKRGAKIVRQS 105 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCS--SCHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCc--CCHHHHHHHHhCCCEEEEEe
Confidence 5677888899999999999999999999999999987778888881000000033442 22333444445666443332
Q ss_pred CCCcC-------CC-ccCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEeec
Q 016513 337 GSAKA-------TD-AESTEVILEGALK---------------SAIEKGLCSPGDAVVALHRI 376 (388)
Q Consensus 337 ~~~~~-------~~-~~~~e~~i~~a~~---------------~~~~~g~~~~GD~vVvv~g~ 376 (388)
..... .| --+.-+++..+++ .|.+.|++.. +.||.+.|.
T Consensus 106 H~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 106 HILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp CTTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred ccccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 21000 00 0134455666666 3668999999 889999887
No 35
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=95.64 E-value=0.25 Score=44.59 Aligned_cols=110 Identities=21% Similarity=0.200 Sum_probs=70.8
Q ss_pred hhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEEEeccccCC-------CCCCcCCCcccccccccccc
Q 016513 257 LESLASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSVVVPVLTTD-------SFDWTCSDETPARHSLIYRG 329 (388)
Q Consensus 257 ~~~ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav~~p~~~tt-------~~~w~~~~~~~aR~l~l~~G 329 (388)
++.....|++-|.+++.+-||+.|.+|.||+++...-.. .+++| | +-.|. -....|+..--.|
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvV-------Th~~GF~~pg~~e--~~~e~~~~L~~~G 105 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSV-------THHAGFREKGQLE--LEDEARDALLERG 105 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEE-------CCCTTSSSTTCCS--SCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEE-------eCcCCCCCCCCCc--CCHHHHHHHHhCC
Confidence 567788889999999999999999999999999987655 78888 5 33442 2233344444456
Q ss_pred cEEEEeCCCCcC-------CC-ccCHHHHHHHHH-----------H---HHHHcCCCCCCCEEEEEeec
Q 016513 330 LIPILAEGSAKA-------TD-AESTEVILEGAL-----------K---SAIEKGLCSPGDAVVALHRI 376 (388)
Q Consensus 330 V~P~l~~~~~~~-------~~-~~~~e~~i~~a~-----------~---~~~~~g~~~~GD~vVvv~g~ 376 (388)
+.-+-....... .| --+.-++|..++ + .|.+.|++..|+.||.+.|.
T Consensus 106 ~~V~t~tH~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT 174 (206)
T 1t57_A 106 VNVYAGSHALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGT 174 (206)
T ss_dssp CEEECCSCTTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECS
T ss_pred CEEEEeeccccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccc
Confidence 543322221000 00 001223333222 2 26699999999999999887
No 36
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=95.40 E-value=0.024 Score=58.35 Aligned_cols=92 Identities=17% Similarity=0.298 Sum_probs=76.0
Q ss_pred CCCCEEEeCCCCChhhHHHHHHHHcc--------CC-----CCceEEEeecCHHhHhhHHHHHhh--c-----------C
Q 016513 83 NNIDMIALSFVRKGSDLVNVRKVLGP--------HA-----KNIQLMSKVENQEGVVNFDDILRE--T-----------D 136 (388)
Q Consensus 83 ~g~d~v~~sfV~sa~dv~~v~~~l~~--------~~-----~~~~IiakIEt~~av~nldeI~~~--~-----------D 136 (388)
..+-.+++||.+|++|+.++..++++ .| ..+.|++.+||.+.+.|.++|++. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45667999999999999999877732 12 257899999999999999999975 2 2
Q ss_pred ceeecCCcccCCCChh----hHHHHHHHHHHHHHHcCCCEEE
Q 016513 137 SFMVARGDLGMEIPVE----KIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 137 gi~igrgDLg~e~~~~----~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
-||+|+.|=+.+-|.- .+..||.++.+.|+++|.++-.
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 6899998887777762 7889999999999999999743
No 37
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.32 E-value=0.028 Score=50.33 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=84.1
Q ss_pred HHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEe---ecCHHhHhhHHHHHhh-cCceeecCCcccCCCCh
Q 016513 76 ILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK---VENQEGVVNFDDILRE-TDSFMVARGDLGMEIPV 151 (388)
Q Consensus 76 i~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak---IEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~~ 151 (388)
+ +.+.+.|+|+|.++-....+++.++.+.+++.|.. ++.- .+| -.+.+..+.+. +|.|.+.+|-=|...+.
T Consensus 70 ~-~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~t--~~~~~~~~~~~g~d~i~v~~g~~g~~~~~ 144 (211)
T 3f4w_A 70 S-QLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQ--VVVDMICVDD--LPARVRLLEEAGADMLAVHTGTDQQAAGR 144 (211)
T ss_dssp H-HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE--EEEECTTCSS--HHHHHHHHHHHTCCEEEEECCHHHHHTTC
T ss_pred H-HHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCe--EEEEecCCCC--HHHHHHHHHHcCCCEEEEcCCCcccccCC
Confidence 6 88899999999998766557788888888776643 3322 233 24557777776 79888766522222221
Q ss_pred hhHHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHH
Q 016513 152 EKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 230 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~ 230 (388)
..+ ...+++ .+.. +.|+++...+ .| .++..+...|+|+++...--..+..|.++++.+.+.+
T Consensus 145 ~~~-~~i~~l---~~~~~~~~i~~~gGI--------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~ 207 (211)
T 3f4w_A 145 KPI-DDLITM---LKVRRKARIAVAGGI--------SS-----QTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVL 207 (211)
T ss_dssp CSH-HHHHHH---HHHCSSCEEEEESSC--------CT-----TTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHH
T ss_pred CCH-HHHHHH---HHHcCCCcEEEECCC--------CH-----HHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHH
Confidence 111 111122 2222 5777653321 12 3567788889999999865555678999888877665
Q ss_pred H
Q 016513 231 I 231 (388)
Q Consensus 231 ~ 231 (388)
+
T Consensus 208 ~ 208 (211)
T 3f4w_A 208 L 208 (211)
T ss_dssp H
T ss_pred h
Confidence 4
No 38
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=95.14 E-value=0.043 Score=60.41 Aligned_cols=92 Identities=15% Similarity=0.173 Sum_probs=79.7
Q ss_pred CCCEEEeCCCCChhhHHHHHHHHccCC--CCceEEEeecCHHhHhhHHHHHhh--c-C----------ceeecCCcccCC
Q 016513 84 NIDMIALSFVRKGSDLVNVRKVLGPHA--KNIQLMSKVENQEGVVNFDDILRE--T-D----------SFMVARGDLGME 148 (388)
Q Consensus 84 g~d~v~~sfV~sa~dv~~v~~~l~~~~--~~~~IiakIEt~~av~nldeI~~~--~-D----------gi~igrgDLg~e 148 (388)
.+...++||.+++.|+.++--+.++.| ..+.|++..||.+.++|.++|++. + + -||+|.-|=+-+
T Consensus 528 a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVMLGYSDS~KD 607 (970)
T 1jqo_A 528 SFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKD 607 (970)
T ss_dssp TEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEEEESTTHHHH
T ss_pred hhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeccccccc
Confidence 355778999999999999999998887 358899999999999999999985 2 1 599999998888
Q ss_pred CChh----hHHHHHHHHHHHHHHcCCCEEEh
Q 016513 149 IPVE----KIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 149 ~~~~----~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-|.- .+..+|.++.+.|+++|+++...
T Consensus 608 ~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 638 (970)
T 1jqo_A 608 AGRLSAAWQLYRAQEEMAQVAKRYGVKLTLF 638 (970)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCcEEEe
Confidence 8862 78899999999999999998653
No 39
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.57 E-value=0.3 Score=48.17 Aligned_cols=124 Identities=19% Similarity=0.290 Sum_probs=76.8
Q ss_pred hhCHHHHHhccccCCCCEEEe--CCCCChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhhcCceeec--CCc
Q 016513 70 EKDKEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVA--RGD 144 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~Dgi~ig--rgD 144 (388)
+.+.+.+ +.+++.|+|+|.+ ++..+...++.++++- +...++.+++ .+-|++....+.+ .-+|+|.+| +|-
T Consensus 107 ~~~~~~~-~~lieaGvd~I~idta~G~~~~~~~~I~~ik-~~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpGs 182 (366)
T 4fo4_A 107 PGNEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGS 182 (366)
T ss_dssp TTCHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred hhHHHHH-HHHHhCCCCEEEEeCCCCCCHHHHHHHHHHH-HhcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCCC
Confidence 3456667 8889999999987 5555554444343333 3324566666 5777776655443 238999996 332
Q ss_pred ccC-----CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 145 LGM-----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 145 Lg~-----e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
-.. ..+.+. ..+...+.+.|++.++|+|-+..+- ...|++.++..|+|++|+.
T Consensus 183 ~~~tr~~~g~g~p~-~~~l~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 183 ICTTRIVTGVGVPQ-ITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 240 (366)
T ss_dssp TBCHHHHHCCCCCH-HHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred CCCcccccCcccch-HHHHHHHHHHHhhcCCeEEEeCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 110 011222 2334556666777899998654432 2357899999999999995
No 40
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.49 E-value=0.22 Score=51.02 Aligned_cols=125 Identities=16% Similarity=0.223 Sum_probs=76.4
Q ss_pred hhCHHHHHhccccCCCCEEEeCCCCC-hhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhhcCceeecCCcccC
Q 016513 70 EKDKEDILRWGVPNNIDMIALSFVRK-GSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDLGM 147 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sfV~s-a~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~Dgi~igrgDLg~ 147 (388)
+.+.+.+ +..++.|+|.|.+-...- .+.+.+..+.+.+.-.++.|++ .+-|.+....+.+ .-+|+|.++-|.=+.
T Consensus 230 ~d~~~~a-~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~Vg~g~Gs~ 306 (496)
T 4fxs_A 230 PGNEERV-KALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSI 306 (496)
T ss_dssp SCCHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHH--HTCSEEEECSSCCTT
T ss_pred cchHHHH-HHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHH--hCCCEEEECCCCCcC
Confidence 4556777 788899999998754321 1222222222322223456666 4777766544432 128999986332121
Q ss_pred CC-------ChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 148 EI-------PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 148 e~-------~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
.. +. .-..+...+.++|++.++|+|.+..+- -..|++.++..|+|++|+.
T Consensus 307 ~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 307 CTTRIVTGVGV-PQITAIADAAGVANEYGIPVIADGGIR------------FSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp BCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCc-cHHHHHHHHHHHhccCCCeEEEeCCCC------------CHHHHHHHHHcCCCeEEec
Confidence 11 11 133455677788888899999755432 3468899999999999995
No 41
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.34 E-value=0.23 Score=51.16 Aligned_cols=125 Identities=17% Similarity=0.201 Sum_probs=76.7
Q ss_pred hCHHHHHhccccCCCCEEEeCCCC-ChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhhcCceeecCCcccCC
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDLGME 148 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~-sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~Dgi~igrgDLg~e 148 (388)
.+.+.+ +..++.|+|.|.+-... ..+.+.++.+.+.+.-.+..+++ -+-|.+....+.+ .-+|+|.+|-|-=+..
T Consensus 256 d~~era-~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 256 DAMTRI-DALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGSIC 332 (511)
T ss_dssp THHHHH-HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTC
T ss_pred chHHHH-HHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCcccc
Confidence 345666 77889999999885433 23333333333333333455555 6777666544333 2389999864431111
Q ss_pred -------CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 149 -------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 149 -------~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
.+.+ -..+...+.++|++.++|+|.+..+- -..|++.|+..|||++|+..
T Consensus 333 ~~~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 333 TTRVVAGVGVP-QLTAVYDCATEARKHGIPVIADGGIK------------YSGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp CHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred ccccccCCCCC-cHHHHHHHHHHHHhCCCcEEEeCCCC------------CHHHHHHHHHhCchhheecH
Confidence 1112 23445567778888899999755432 34788999999999999963
No 42
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.29 E-value=0.17 Score=50.56 Aligned_cols=119 Identities=18% Similarity=0.264 Sum_probs=72.6
Q ss_pred HHHHHhccccCCCCEEEe--CCCCChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhh-cCceeecC--Cccc
Q 016513 73 KEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRE-TDSFMVAR--GDLG 146 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-~Dgi~igr--gDLg 146 (388)
.+.+ +.+++.|+|+|.+ ++-.+....+.++.+-... .+.+++ .+=|.+.... +.+. +|+|.+|- |..+
T Consensus 146 ~e~~-~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~--~i~Vi~g~V~t~e~A~~---a~~aGAD~I~vG~g~Gs~~ 219 (400)
T 3ffs_A 146 IERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSIC 219 (400)
T ss_dssp CHHH-HHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECC------
T ss_pred HHHH-HHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC--CCeEEEeecCCHHHHHH---HHHcCCCEEEEeCCCCcCc
Confidence 4556 7788999999987 6655533333333333222 467776 5666655543 3344 89999963 3221
Q ss_pred C-----CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 147 M-----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 147 ~-----e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
. ..+.+ -..+...+.+.+++.++|+|-+..+. ...|++.++..|+|++|+.
T Consensus 220 ~tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~------------~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 220 TTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp ---CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHTTTCSEEEEC
T ss_pred ccccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1 01112 23445666666777799998755433 3468899999999999984
No 43
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.12 E-value=0.31 Score=47.91 Aligned_cols=119 Identities=18% Similarity=0.276 Sum_probs=71.5
Q ss_pred HHHHHhccccCCCCEEEe--CCCCChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhh-cCceeec--CCccc
Q 016513 73 KEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRE-TDSFMVA--RGDLG 146 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-~Dgi~ig--rgDLg 146 (388)
.+.+ +.+++.|+|+|.+ ++-.+...++.++++-... ++.+++ .+-|++..+.+ .+. +|+|.+| +|...
T Consensus 107 ~e~a-~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~l---~~aGaD~I~VG~~~Gs~~ 180 (361)
T 3khj_A 107 IERA-KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKEL---IENGADGIKVGIGPGSIC 180 (361)
T ss_dssp HHHH-HHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHHH---HHTTCSEEEECSSCCTTC
T ss_pred HHHH-HHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHHH---HHcCcCEEEEecCCCcCC
Confidence 4556 7788999999986 4433332223333322222 467775 77777665443 334 8999986 44211
Q ss_pred C-----CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 147 M-----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 147 ~-----e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
. ..+.+. ..+...+.+.+++.+.|+|.+..+- ...|++.++..|+|++|+.
T Consensus 181 ~tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~GGI~------------~~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 181 TTRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIADGGIR------------YSGDIGKALAVGASSVMIG 236 (361)
T ss_dssp CHHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEESCCC------------SHHHHHHHHHHTCSEEEES
T ss_pred CcccccCCCCCc-HHHHHHHHHHHhhcCCeEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1 011122 3344556666777899998654322 2357899999999999985
No 44
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.03 E-value=0.22 Score=50.89 Aligned_cols=123 Identities=15% Similarity=0.236 Sum_probs=74.6
Q ss_pred hhCHHHHHhccccCCCCEEEeC--CCCChhhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 70 EKDKEDILRWGVPNNIDMIALS--FVRKGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~s--fV~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+.+.+.+ +..++.|+|+|.+- +-.+. .+.+..+.+.+.-.++.+++. +-|.+....+ .++ +|+|.+|-|.=
T Consensus 228 ~~~~~~a-~~l~~aG~d~I~id~a~g~~~-~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l---~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 228 ADTGERV-AALVAAGVDVVVVDTAHGHSK-GVIERVRWVKQTFPDVQVIGGNIATAEAAKAL---AEAGADAVKVGIGPG 302 (490)
T ss_dssp TTHHHHH-HHHHHTTCSEEEEECSCCSBH-HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHH---HHTTCSEEEECSSCS
T ss_pred cchHHHH-HHHhhcccceEEecccCCcch-hHHHHHHHHHHHCCCceEEEeeeCcHHHHHHH---HHcCCCEEEECCCCC
Confidence 3445666 78889999999863 32333 222222223222235677775 7777665443 333 89999863321
Q ss_pred cC-------CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 146 GM-------EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 146 g~-------e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
+. ..+.+ -..+...+.++|++.++|+|.+..+- -..|++.++..|+|++|+.
T Consensus 303 s~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~GGI~------------~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 303 SICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIADGGIR------------FSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TTCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred cCCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEeCCCC------------CHHHHHHHHHcCCCeeeec
Confidence 11 11222 23445667777777899999755432 2468899999999999996
No 45
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=93.99 E-value=0.098 Score=57.16 Aligned_cols=93 Identities=19% Similarity=0.314 Sum_probs=79.7
Q ss_pred cCCCCEEEeCCCCChhhHHHHHHHHccCCC--CceEEEeecCHHhHhhHHHHHhh--c-C----------ceeecCCccc
Q 016513 82 PNNIDMIALSFVRKGSDLVNVRKVLGPHAK--NIQLMSKVENQEGVVNFDDILRE--T-D----------SFMVARGDLG 146 (388)
Q Consensus 82 ~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~--~~~IiakIEt~~av~nldeI~~~--~-D----------gi~igrgDLg 146 (388)
...+...++||.+++.|+.++--+.++.|- .+.|++..||.+.++|.++|++. + + -||+|..|=+
T Consensus 466 ~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~ 545 (883)
T 1jqn_A 466 QGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSA 545 (883)
T ss_dssp TTSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHH
T ss_pred hhhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeecccc
Confidence 345677889999999999999999988874 58899999999999999999985 1 1 5899988877
Q ss_pred CCCChh----hHHHHHHHHHHHHHHcCCCEEE
Q 016513 147 MEIPVE----KIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 147 ~e~~~~----~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
-+-|.- .+..+|.++.+.|+++|+++..
T Consensus 546 KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~l 577 (883)
T 1jqn_A 546 KDAGVMAASWAQYQAQDALIKTCEKAGIELTL 577 (883)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 777752 7889999999999999999865
No 46
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.93 E-value=0.095 Score=48.98 Aligned_cols=139 Identities=9% Similarity=0.023 Sum_probs=87.3
Q ss_pred HHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeec---CCcccCCCCh
Q 016513 75 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA---RGDLGMEIPV 151 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~ig---rgDLg~e~~~ 151 (388)
.+ +.+.+.|+|+|.+.. +..+++.+..+.+++.|....+.-.=.| -++.+++++...|.|++- ||==|....
T Consensus 101 ~i-~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi- 175 (246)
T 3inp_A 101 LI-ESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFI- 175 (246)
T ss_dssp HH-HHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCC-
T ss_pred HH-HHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccc-
Confidence 45 777899999999875 4446788888888888776666544445 457888999889988763 442122222
Q ss_pred hhHHHHHHHHHHHHHHcC--CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHH
Q 016513 152 EKIFLAQKMMIYKCNLVG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 229 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~g--kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i 229 (388)
+....-.+++-+.+.+.| .++-+... -.|.. +..++..|+|.++..+--.-...|.++++.+++.
T Consensus 176 ~~~l~KI~~lr~~~~~~~~~~~I~VDGG--------I~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~ 242 (246)
T 3inp_A 176 PAMLDKAKEISKWISSTDRDILLEIDGG--------VNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDE 242 (246)
T ss_dssp TTHHHHHHHHHHHHHHHTSCCEEEEESS--------CCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCeeEEEECC--------cCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHH
Confidence 233333344444444445 34333221 13433 4778899999999975433356799999888765
Q ss_pred HH
Q 016513 230 CI 231 (388)
Q Consensus 230 ~~ 231 (388)
+.
T Consensus 243 i~ 244 (246)
T 3inp_A 243 LN 244 (246)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 47
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.72 E-value=0.81 Score=43.26 Aligned_cols=154 Identities=11% Similarity=0.066 Sum_probs=95.2
Q ss_pred CChhCHHHHHhccccCCCCEEEeCCCCChh------hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceee
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSFVRKGS------DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMV 140 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sfV~sa~------dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~i 140 (388)
++..++..|++...+.|++.|-+.+-.+.+ +..++.+.+.+. .++.+.+.+-+. +.++..++. .|.|++
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n~---~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPNM---KGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSSH---HHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCCH---HHHHHHHHCCCCEEEE
Confidence 466677777577778999999885422333 444444444443 466776666443 333444433 577776
Q ss_pred cCCcccC---------CCChhhHHHHHHHHHHHHHHcCCCEE--EhhhH-HHHhhcCCCCChHHHHHHHH-HHHcCCcee
Q 016513 141 ARGDLGM---------EIPVEKIFLAQKMMIYKCNLVGKPVV--TATQM-LESMIKSPRPTRAEATDVAN-AVLDGTDCV 207 (388)
Q Consensus 141 grgDLg~---------e~~~~~v~~~qk~ii~~c~~~gkpvi--~atq~-lesM~~~~~ptraEv~dv~~-av~~g~d~i 207 (388)
. ++. ..+.++.....+++++.|+++|+.|- +.+-. .| ...+-+..++.+++. +...|+|.+
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e---~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECP---YDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEET---TTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCC---cCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 3 222 35677788888899999999999985 22110 00 011234455666555 556899999
Q ss_pred EeccccCCCCCHHHHHHHHHHHHHH
Q 016513 208 MLSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 208 ~Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
.|. +|.=...|.+.-+.++.+.+.
T Consensus 173 ~l~-Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 173 SLG-DTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp EEE-ETTSCCCHHHHHHHHHHHHTT
T ss_pred Eec-CCCCCcCHHHHHHHHHHHHHh
Confidence 998 454445688877777777643
No 48
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=93.33 E-value=0.3 Score=45.26 Aligned_cols=134 Identities=13% Similarity=0.036 Sum_probs=83.6
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccC---------CCCceEEEeecCHHhHhhHHHHHhhcCceee---cCCcc
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPH---------AKNIQLMSKVENQEGVVNFDDILRETDSFMV---ARGDL 145 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~---------~~~~~IiakIEt~~av~nldeI~~~~Dgi~i---grgDL 145 (388)
+.+.+.|+|+|.+..-.+ +++.++.+.+.+. |..+.+-..-+|+ ++.++++++.+|.|.+ .||==
T Consensus 86 ~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~pgfg 162 (237)
T 3cu2_A 86 KAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLDPRNG 162 (237)
T ss_dssp HHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEETTTT
T ss_pred HHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeeccCcC
Confidence 778899999998876555 6788888888776 5555555444665 7778888888997766 55522
Q ss_pred cCCCChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHH--cCCceeEeccccCCCCCHHH
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVL--DGTDCVMLSGESAAGAYPEI 221 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~--~g~d~i~Ls~eta~G~~P~~ 221 (388)
|... .+....-.+++-+...+. +.|+.+...+ + ...+...+. .|+|++...+--... .|.+
T Consensus 163 gq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI----------~---~~~~~~~~~~~aGad~~VvGSaIf~~-d~~~ 227 (237)
T 3cu2_A 163 TKYP-SELILDRVIQVEKRLGNRRVEKLINIDGSM----------T---LELAKYFKQGTHQIDWLVSGSALFSG-ELKT 227 (237)
T ss_dssp EECC-HHHHHHHHHHHHHHHGGGGGGCEEEEESSC----------C---HHHHHHHHHSSSCCCCEEECGGGGSS-CHHH
T ss_pred Ceec-ChhHHHHHHHHHHHHHhcCCCceEEEECCc----------C---HHHHHHHHHhCCCCcEEEEeeHHhCC-CHHH
Confidence 3333 222222223333333332 4666543221 1 123456777 899999997554333 7888
Q ss_pred HHHHHHHH
Q 016513 222 AVKIMRRI 229 (388)
Q Consensus 222 ~v~~~~~i 229 (388)
+++.+++.
T Consensus 228 ~~~~l~~~ 235 (237)
T 3cu2_A 228 NLKVWKSS 235 (237)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887653
No 49
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=93.23 E-value=0.4 Score=46.25 Aligned_cols=107 Identities=10% Similarity=0.184 Sum_probs=67.9
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceee-cCCcccCCCC-hhhH
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMV-ARGDLGMEIP-VEKI 154 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~i-grgDLg~e~~-~~~v 154 (388)
+.+.+.|+|+|.+++-...+-++.+++ . .+.++.++.+.+-... +.+. +|+|.+ |+ +-|-..+ ...+
T Consensus 82 ~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a~~---~~~~GaD~i~v~g~-~~GG~~g~~~~~ 151 (332)
T 2z6i_A 82 DLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALAKR---MEKIGADAVIAEGM-EAGGHIGKLTTM 151 (332)
T ss_dssp HHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHHHH---HHHTTCSCEEEECT-TSSEECCSSCHH
T ss_pred HHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHHHH---HHHcCCCEEEEECC-CCCCCCCCccHH
Confidence 778899999999998766666666654 2 4789999988765433 3333 799998 43 2121112 1112
Q ss_pred HHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 155 FLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 155 ~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
...+++. ...++|++.+..+- ...|+..++..|+|+++++
T Consensus 152 -~ll~~i~---~~~~iPViaaGGI~------------~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 152 -TLVRQVA---TAISIPVIAAGGIA------------DGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp -HHHHHHH---HHCSSCEEEESSCC------------SHHHHHHHHHTTCSEEEEC
T ss_pred -HHHHHHH---HhcCCCEEEECCCC------------CHHHHHHHHHcCCCEEEec
Confidence 2222222 23579999876432 1246778888999999985
No 50
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=93.18 E-value=0.15 Score=46.84 Aligned_cols=137 Identities=12% Similarity=0.099 Sum_probs=84.6
Q ss_pred HHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeec---CCcccCCCCh
Q 016513 75 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA---RGDLGMEIPV 151 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~ig---rgDLg~e~~~ 151 (388)
.+ +.+.+.|+|+|.+.. +..+++.+..+.+++.|....+...-.| .++.+++++...|.+++- +|==|..+..
T Consensus 79 ~i-~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~ 154 (228)
T 3ovp_A 79 WV-KPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGT--SVEYLAPWANQIDMALVMTVEPGFGGQKFME 154 (228)
T ss_dssp GH-HHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEEESSCTTTCSCCCCG
T ss_pred HH-HHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEEeeecCCCCCcccCH
Confidence 34 667789999999975 5556777777788777766555444445 468888999889988763 3322222222
Q ss_pred hhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHH
Q 016513 152 EKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 229 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i 229 (388)
..+..+ +..++. +.++.+... -.|.. +..++..|+|.++..+--.-...|.++++.+++.
T Consensus 155 ~~l~ki-----~~lr~~~~~~~I~VdGG--------I~~~t-----~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~ 216 (228)
T 3ovp_A 155 DMMPKV-----HWLRTQFPSLDIEVDGG--------VGPDT-----VHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNV 216 (228)
T ss_dssp GGHHHH-----HHHHHHCTTCEEEEESS--------CSTTT-----HHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHH
T ss_pred HHHHHH-----HHHHHhcCCCCEEEeCC--------cCHHH-----HHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHH
Confidence 222221 112222 344444322 12333 3778899999999975433456799999888876
Q ss_pred HHHH
Q 016513 230 CIEA 233 (388)
Q Consensus 230 ~~~a 233 (388)
+.++
T Consensus 217 ~~~~ 220 (228)
T 3ovp_A 217 CSEA 220 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 51
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.02 E-value=1.2 Score=43.24 Aligned_cols=158 Identities=12% Similarity=0.122 Sum_probs=100.0
Q ss_pred CChhCHHHHHh-ccccCCCCEEEe-CCCCChhhHHHHHHHHcc-----CCCCceEEEeecCHHhHhhHHHHHhh-cCc--
Q 016513 68 LTEKDKEDILR-WGVPNNIDMIAL-SFVRKGSDLVNVRKVLGP-----HAKNIQLMSKVENQEGVVNFDDILRE-TDS-- 137 (388)
Q Consensus 68 lt~~D~~di~~-~~l~~g~d~v~~-sfV~sa~dv~~v~~~l~~-----~~~~~~IiakIEt~~av~nldeI~~~-~Dg-- 137 (388)
++..|+..|.+ ...+.|++.|=+ +|+.++++.+.++++... .-+++.+.+..=+.. .++..++. .|.
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v~ 114 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVLN 114 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEEE
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEEE
Confidence 56677777756 556789999988 667778666655554431 223456777665555 45554444 463
Q ss_pred eeecCCcc----cCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhH-HHHhhcCCCCChHHHHHHHH-HHHcCCceeEecc
Q 016513 138 FMVARGDL----GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQM-LESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 211 (388)
Q Consensus 138 i~igrgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~-lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~ 211 (388)
++++--|+ -.....++.....+.+++.|+++|+.+.+.... .++ ++-+...+.+++. +...|+|.+.|.
T Consensus 115 i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Ga~~i~l~- 189 (337)
T 3ble_A 115 LLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNG----FRNSPDYVKSLVEHLSKEHIERIFLP- 189 (337)
T ss_dssp EEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHH----HHHCHHHHHHHHHHHHTSCCSEEEEE-
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC----CcCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 34443332 122345667777788999999999998654221 111 1223344555555 556699999994
Q ss_pred ccCCCCCHHHHHHHHHHHHHHH
Q 016513 212 ESAAGAYPEIAVKIMRRICIEA 233 (388)
Q Consensus 212 eta~G~~P~~~v~~~~~i~~~a 233 (388)
+|.=.-.|.++-+.++.+.++.
T Consensus 190 DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 190 DTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHC
T ss_pred cCCCCcCHHHHHHHHHHHHHhc
Confidence 7777778988888887776543
No 52
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=92.73 E-value=0.48 Score=43.64 Aligned_cols=137 Identities=12% Similarity=0.065 Sum_probs=86.0
Q ss_pred hccccCCCCEEEeCCCC-ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceee---cCCcccCCCChhh
Q 016513 78 RWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV---ARGDLGMEIPVEK 153 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~-sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~i---grgDLg~e~~~~~ 153 (388)
+.+.++|+|+|.++.-. + .++.++.+.+++.|..+.+...-.|+ ++.+++++...|-+++ .||==|..... .
T Consensus 74 ~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~-~ 149 (231)
T 3ctl_A 74 AQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFIP-E 149 (231)
T ss_dssp HHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCCT-T
T ss_pred HHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCccccH-H
Confidence 66788999999988644 3 57888888888888776665555565 7778888888998773 34422444432 2
Q ss_pred HHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec-cccCCCCC-HHHHHHHHHHH
Q 016513 154 IFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS-GESAAGAY-PEIAVKIMRRI 229 (388)
Q Consensus 154 v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls-~eta~G~~-P~~~v~~~~~i 229 (388)
...-.+++-+...+. +.++.+... -.|.. +..++..|+|.++.. +--..... |.++++.+++.
T Consensus 150 ~l~kI~~lr~~~~~~~~~~~I~VdGG--------I~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~~ 216 (231)
T 3ctl_A 150 MLDKLAELKAWREREGLEYEIEVDGS--------CNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQ 216 (231)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEESC--------CSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCceEEEECC--------cCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHHH
Confidence 222223333333333 455543221 12333 366778899999997 54333335 99999998775
Q ss_pred HH
Q 016513 230 CI 231 (388)
Q Consensus 230 ~~ 231 (388)
+.
T Consensus 217 ~~ 218 (231)
T 3ctl_A 217 IL 218 (231)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 53
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=92.40 E-value=1 Score=45.96 Aligned_cols=120 Identities=18% Similarity=0.181 Sum_probs=74.2
Q ss_pred CHHHHHhccccCCCCEEEe--CCCCCh---hhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhhcCceeecC--C
Q 016513 72 DKEDILRWGVPNNIDMIAL--SFVRKG---SDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRETDSFMVAR--G 143 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~--sfV~sa---~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~~Dgi~igr--g 143 (388)
..+.+ +.+++.|+|+|.+ ++-... +.++.+++.+ .+..++++ +.|.+....+.+. -+|+|.+|. |
T Consensus 256 ~~~~a-~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l~~a--Gad~I~vg~~~G 328 (514)
T 1jcn_A 256 DKYRL-DLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNLIDA--GVDGLRVGMGCG 328 (514)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHHHHH--TCSEEEECSSCS
T ss_pred hHHHH-HHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHHHHc--CCCEEEECCCCC
Confidence 35566 7888999999998 433332 3445555443 35778875 8777665544432 289998853 3
Q ss_pred cccCC-----CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 144 DLGME-----IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 144 DLg~e-----~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
--... .+.+ .+.....+-+.+++.+.|+|.+..+- ...|+..++..|+|++++..
T Consensus 329 ~~~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~GGI~------------~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 329 SICITQEVMACGRP-QGTAVYKVAEYARRFGVPIIADGGIQ------------TVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp CCBTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred cccccccccCCCcc-chhHHHHHHHHHhhCCCCEEEECCCC------------CHHHHHHHHHcCCCeeeECH
Confidence 11000 1211 23334555556667799998654332 34688999999999999965
No 54
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.13 E-value=0.43 Score=43.39 Aligned_cols=137 Identities=8% Similarity=0.087 Sum_probs=82.3
Q ss_pred HHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh---hcCceeecCCc---ccCC
Q 016513 75 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR---ETDSFMVARGD---LGME 148 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~---~~Dgi~igrgD---Lg~e 148 (388)
.+ +.+.+.|+|+|.++.-.+.+.+.++.+.+.+.| ..++.-+....-++.+.+++. .+|.+.++.-. =|..
T Consensus 79 ~i-~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 79 YV-EPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp GH-HHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred HH-HHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 35 667788999999998777655244444444444 445555633334677889988 78988885322 2333
Q ss_pred CChhhHHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHH
Q 016513 149 IPVEKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 227 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~ 227 (388)
.++..+..+ +++ .+.. +.|+.+...+ .|. .+..++..|+|++...+---....|.++++.++
T Consensus 156 ~~~~~l~~i-~~~---~~~~~~~pi~v~GGI--------~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~ 218 (228)
T 1h1y_A 156 FMPEMMEKV-RAL---RKKYPSLDIEVDGGL--------GPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALR 218 (228)
T ss_dssp CCGGGHHHH-HHH---HHHCTTSEEEEESSC--------STT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred CCHHHHHHH-HHH---HHhcCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHH
Confidence 443333222 111 1222 7787765431 232 234555569999999755444457999999887
Q ss_pred HHHH
Q 016513 228 RICI 231 (388)
Q Consensus 228 ~i~~ 231 (388)
+.++
T Consensus 219 ~~~~ 222 (228)
T 1h1y_A 219 KSVE 222 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 55
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.90 E-value=0.54 Score=46.29 Aligned_cols=116 Identities=18% Similarity=0.251 Sum_probs=69.5
Q ss_pred hhCHHHHHhccccCCCCEEEe--CCCCCh---hhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhhcCceeecCC
Q 016513 70 EKDKEDILRWGVPNNIDMIAL--SFVRKG---SDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRETDSFMVARG 143 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~--sfV~sa---~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~~Dgi~igrg 143 (388)
+.+.+.+ +.+++.|+|+|.+ ++-.+. +.++.+|+.. .++.|+++ +-|++....+.+ .-+|+|.++-+
T Consensus 99 ~~~~e~~-~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~----~~~~Vi~G~V~T~e~A~~a~~--aGaD~I~Vg~g 171 (361)
T 3r2g_A 99 ENELQRA-EALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLL----GSRCIMAGNVATYAGADYLAS--CGADIIKAGIG 171 (361)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHH----TTCEEEEEEECSHHHHHHHHH--TTCSEEEECCS
T ss_pred HHHHHHH-HHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhc----CCCeEEEcCcCCHHHHHHHHH--cCCCEEEEcCC
Confidence 4445666 8889999999987 333332 3444444433 35789995 888766543322 23899998522
Q ss_pred cccCC--------CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 144 DLGME--------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 144 DLg~e--------~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
- |-. .+.+ |-..+..|.++.+|+|....+- .-.|++.++..|+|++|+.
T Consensus 172 ~-G~~~~tr~~~g~g~p-----~l~aI~~~~~~~~PVIAdGGI~------------~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 172 G-GSVCSTRIKTGFGVP-----MLTCIQDCSRADRSIVADGGIK------------TSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp S-SSCHHHHHHHCCCCC-----HHHHHHHHTTSSSEEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred C-CcCccccccCCccHH-----HHHHHHHHHHhCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1 100 1111 3334444544444888644322 3468899999999999995
No 56
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=91.78 E-value=0.33 Score=44.53 Aligned_cols=135 Identities=9% Similarity=0.073 Sum_probs=79.1
Q ss_pred hccccCCCCEEEeCCC--CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcc---cCCCChh
Q 016513 78 RWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDL---GMEIPVE 152 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV--~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDL---g~e~~~~ 152 (388)
+.+.+.|+|+|.++.- .+ ++..++.+.+.+.|..+.+...-.|+ .+.++++++.+|.+.++.-.- +...+ +
T Consensus 79 ~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~-~ 154 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFI-P 154 (230)
T ss_dssp HHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCC-G
T ss_pred HHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCc-H
Confidence 6678889999999865 33 56666666676666554444433554 566788888899776663322 22222 2
Q ss_pred hHHHHHHHHHHHHHH--cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHH
Q 016513 153 KIFLAQKMMIYKCNL--VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 229 (388)
Q Consensus 153 ~v~~~qk~ii~~c~~--~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i 229 (388)
....-.+++-+.+.+ .+.|+.+... -.+.. +......|+|++...+---....|.++++.+++.
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~GG--------I~~~~-----~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~~ 220 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGG--------LKPNN-----TWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNS 220 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESS--------CCTTT-----THHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEECC--------cCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence 222222333333333 3667654322 12222 2555666999999975544445788888887653
No 57
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=91.56 E-value=2.6 Score=39.94 Aligned_cols=195 Identities=11% Similarity=0.040 Sum_probs=112.3
Q ss_pred CChhCHHHHHhccccCCCCEEEeCC-CCC-----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceee
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSF-VRK-----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMV 140 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sf-V~s-----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~i 140 (388)
++..++..|++...+.|++.|-+.+ +.. ..|..++.+.+.+. .++.+.+.+.+.+.+ +.-++. .|.|++
T Consensus 27 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i---~~a~~aG~~~v~i 102 (302)
T 2ftp_A 27 IEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR-PGVTYAALAPNLKGF---EAALESGVKEVAV 102 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTSEEEEECCSHHHH---HHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc-CCCEEEEEeCCHHHH---HHHHhCCcCEEEE
Confidence 4667777775677779999998754 222 13555555555443 566777666544433 333333 577765
Q ss_pred -c-CCcc----cCCCChhhHHHHHHHHHHHHHHcCCCEEE--hhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEecc
Q 016513 141 -A-RGDL----GMEIPVEKIFLAQKMMIYKCNLVGKPVVT--ATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 211 (388)
Q Consensus 141 -g-rgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~--atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~ 211 (388)
. --|+ -...+.++.....+++++.|+++|+.|-. .+- + +--...+-+..++.+++. +...|+|.+.|.
T Consensus 103 ~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~-~-~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~- 179 (302)
T 2ftp_A 103 FAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCV-L-GCPYDGDVDPRQVAWVARELQQMGCYEVSLG- 179 (302)
T ss_dssp EEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECT-T-CBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE-
T ss_pred EEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE-e-eCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe-
Confidence 2 2242 12356778888889999999999999831 110 0 000011233455555555 457899999998
Q ss_pred ccCCCCCHHHHHHHHHHHHHHH-hcccchHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCc
Q 016513 212 ESAAGAYPEIAVKIMRRICIEA-ESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGG 283 (388)
Q Consensus 212 eta~G~~P~~~v~~~~~i~~~a-E~~~~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG 283 (388)
+|.=...|.+.-+.++.+.+.. .-.+.. ..+. ..-++.+-...|-+.+++ .|=.|-.|
T Consensus 180 DT~G~~~P~~~~~lv~~l~~~~~~~~l~~-------H~Hn------~~Gla~An~laAv~aGa~-~vd~tv~G 238 (302)
T 2ftp_A 180 DTIGVGTAGATRRLIEAVASEVPRERLAG-------HFHD------TYGQALANIYASLLEGIA-VFDSSVAG 238 (302)
T ss_dssp ESSSCCCHHHHHHHHHHHTTTSCGGGEEE-------EEBC------TTSCHHHHHHHHHHTTCC-EEEEBGGG
T ss_pred CCCCCcCHHHHHHHHHHHHHhCCCCeEEE-------EeCC------CccHHHHHHHHHHHhCCC-EEEecccc
Confidence 6655567988877777776432 100000 0010 122455556666777887 45555443
No 58
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=91.49 E-value=0.89 Score=43.78 Aligned_cols=111 Identities=14% Similarity=0.218 Sum_probs=68.4
Q ss_pred HHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCC-h
Q 016513 74 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIP-V 151 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~-~ 151 (388)
+.+ +.+++.|+|+|.+++-...+.++.+++ . .+.++.++-+.+-...+ .+. +|+|.+--.+.|-..| .
T Consensus 93 ~~~-~~~~~~g~d~V~l~~g~p~~~~~~l~~----~--g~~v~~~v~s~~~a~~a---~~~GaD~i~v~g~~~GG~~G~~ 162 (326)
T 3bo9_A 93 DLV-KVCIEEKVPVVTFGAGNPTKYIRELKE----N--GTKVIPVVASDSLARMV---ERAGADAVIAEGMESGGHIGEV 162 (326)
T ss_dssp HHH-HHHHHTTCSEEEEESSCCHHHHHHHHH----T--TCEEEEEESSHHHHHHH---HHTTCSCEEEECTTSSEECCSS
T ss_pred HHH-HHHHHCCCCEEEECCCCcHHHHHHHHH----c--CCcEEEEcCCHHHHHHH---HHcCCCEEEEECCCCCccCCCc
Confidence 444 778899999999988776555555543 2 47888888776554433 333 7999983212221111 1
Q ss_pred hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 152 EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
..+.. .+++ .+..+.|++.+..+- ...|++.++..|+|+++++
T Consensus 163 ~~~~l-l~~i---~~~~~iPviaaGGI~------------~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 163 TTFVL-VNKV---SRSVNIPVIAAGGIA------------DGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp CHHHH-HHHH---HHHCSSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred cHHHH-HHHH---HHHcCCCEEEECCCC------------CHHHHHHHHHhCCCEEEec
Confidence 12211 1122 234589999866432 2357788888999999985
No 59
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=91.42 E-value=2.6 Score=39.50 Aligned_cols=150 Identities=15% Similarity=0.140 Sum_probs=94.5
Q ss_pred CCCChhCHHHHHhccccC--CCCEEEeCCCCChhhHHHHHHHHccCCC-CceEEEeecCHHhHhhHHHHHhh-cCceeec
Q 016513 66 PTLTEKDKEDILRWGVPN--NIDMIALSFVRKGSDLVNVRKVLGPHAK-NIQLMSKVENQEGVVNFDDILRE-TDSFMVA 141 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~--g~d~v~~sfV~sa~dv~~v~~~l~~~~~-~~~IiakIEt~~av~nldeI~~~-~Dgi~ig 141 (388)
|..|+.|.+.+.+.+.+. |++.|.++ +..+..+++.+...+. .+.+.+-|==|.|-.+.+..+.. -+++--|
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 455777877776788888 89988764 5677888888863234 67787777444443333322221 1122222
Q ss_pred CCccc--CCCC------hhhHHHHHHHHHHHHHHcCCCE--EEhhhHHHHhhcCCCCChHH-HHHHH-HHHHcCCceeEe
Q 016513 142 RGDLG--MEIP------VEKIFLAQKMMIYKCNLVGKPV--VTATQMLESMIKSPRPTRAE-ATDVA-NAVLDGTDCVML 209 (388)
Q Consensus 142 rgDLg--~e~~------~~~v~~~qk~ii~~c~~~gkpv--i~atq~lesM~~~~~ptraE-v~dv~-~av~~g~d~i~L 209 (388)
.-++- +.++ ++.+..-.+.+.++|..+|+|+ |+.|-.| +..| +.... -++..|+|+|=-
T Consensus 99 AdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVKT 169 (260)
T 1p1x_A 99 ADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIKT 169 (260)
T ss_dssp CSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEEC
T ss_pred CCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEEe
Confidence 22111 1112 3467777788889998888884 8888777 4456 33333 377889999865
Q ss_pred ccccCCCCC----HHHHHHHHHHHHHH
Q 016513 210 SGESAAGAY----PEIAVKIMRRICIE 232 (388)
Q Consensus 210 s~eta~G~~----P~~~v~~~~~i~~~ 232 (388)
| .|.. -.+.|+.|++.+++
T Consensus 170 S----TGf~~~gAt~e~v~lm~~~I~~ 192 (260)
T 1p1x_A 170 S----TGKVAVNATPESARIMMEVIRD 192 (260)
T ss_dssp C----CSCSSCCCCHHHHHHHHHHHHH
T ss_pred C----CCCCCCCCCHHHHHHHHHHHHH
Confidence 4 4544 46999999998875
No 60
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.37 E-value=1.6 Score=40.76 Aligned_cols=120 Identities=14% Similarity=0.097 Sum_probs=80.2
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhH----------hhHHHHHhh-cCc
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGV----------VNFDDILRE-TDS 137 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av----------~nldeI~~~-~Dg 137 (388)
+..|.+.+.+.+++.|++.|+++ +.-++... ..++.++.++++.-++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~----~~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQ----RGIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEEC----HHHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEEC----HHHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 56777777689999999999988 34444433 2346677777665544 345555554 676
Q ss_pred eeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCC---------ChHHHHHH-HHHHHcCCcee
Q 016513 138 FMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRP---------TRAEATDV-ANAVLDGTDCV 207 (388)
Q Consensus 138 i~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~p---------traEv~dv-~~av~~g~d~i 207 (388)
|-+ |-+++ +-...++..-.+++.+.|+++|.|+|+- ..| +..++... .-+...|+|.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~----------~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~v 176 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVE----------SFPRGGKVVNETAPEIVAYAARIALELGADAM 176 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEE----------ECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEE----------eeCCCCccccCCCHHHHHHHHHHHHHcCCCEE
Confidence 644 33334 2344667777789999999999998862 223 55566553 45778899998
Q ss_pred Eec
Q 016513 208 MLS 210 (388)
Q Consensus 208 ~Ls 210 (388)
=.+
T Consensus 177 kt~ 179 (263)
T 1w8s_A 177 KIK 179 (263)
T ss_dssp EEE
T ss_pred EEc
Confidence 887
No 61
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.19 E-value=5.4 Score=38.03 Aligned_cols=191 Identities=13% Similarity=0.142 Sum_probs=114.4
Q ss_pred CChhCHHHHHhccccCCCCEEEeCC-CCC-----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCc--e
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSF-VRK-----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDS--F 138 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sf-V~s-----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dg--i 138 (388)
++..++..|.+...+.|++.|=+.| +.+ ..|..++.+.+.+. +++.+.+.+.+.+++ +..++. .|. +
T Consensus 25 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i---~~a~~~g~~~v~i 100 (307)
T 1ydo_A 25 IATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRGL---ENALEGGINEACV 100 (307)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHHH---HHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHhH---HHHHhCCcCEEEE
Confidence 4667777775666678999998753 322 13555555666544 566666666555444 333333 564 3
Q ss_pred eecCCcc----cCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHh-hcCC---CCChHHHHHHHH-HHHcCCceeEe
Q 016513 139 MVARGDL----GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESM-IKSP---RPTRAEATDVAN-AVLDGTDCVML 209 (388)
Q Consensus 139 ~igrgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM-~~~~---~ptraEv~dv~~-av~~g~d~i~L 209 (388)
+++-.|+ -.....++.....+.+++.++++|+.+-..= +| ...| +-+...+.+++. +...|+|.+.|
T Consensus 101 ~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 176 (307)
T 1ydo_A 101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYL----STVFGCPYEKDVPIEQVIRLSEALFEFGISELSL 176 (307)
T ss_dssp EEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEE----ECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEE
T ss_pred EeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEE----EEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 4444443 2334556777888899999999999984210 01 1112 234556666665 46789999999
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHHh-cccchHHHHHHHHhcCCCCCCc-hhHHHHHHHHHHHhcCCcEEEEEcCC
Q 016513 210 SGESAAGAYPEIAVKIMRRICIEAE-SSLDYRAVFKEMIRSTPLPMSP-LESLASSAVRTANKARAKLIVVLTRG 282 (388)
Q Consensus 210 s~eta~G~~P~~~v~~~~~i~~~aE-~~~~~~~~~~~~~~~~~~~~~~-~~~ia~aAv~~A~~l~A~aIvv~T~s 282 (388)
. +|.=.-.|.+.-+.++.+.+..- ..+.. + .. .--+|.+-..+|-+.+++ .|=-|-.
T Consensus 177 ~-DT~G~~~P~~v~~lv~~l~~~~~~~~l~~---------H-----~Hnd~Gla~AN~laAv~aGa~-~vd~tv~ 235 (307)
T 1ydo_A 177 G-DTIGAANPAQVETVLEALLARFPANQIAL---------H-----FHDTRGTALANMVTALQMGIT-VFDGSAG 235 (307)
T ss_dssp E-CSSCCCCHHHHHHHHHHHHTTSCGGGEEE---------E-----CBGGGSCHHHHHHHHHHHTCC-EEEEBGG
T ss_pred c-CCCCCcCHHHHHHHHHHHHHhCCCCeEEE---------E-----ECCCCchHHHHHHHHHHhCCC-EEEEccc
Confidence 6 78777789888888777764321 00100 0 01 122566666677778888 4555544
No 62
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=90.84 E-value=1.2 Score=40.89 Aligned_cols=135 Identities=13% Similarity=0.033 Sum_probs=79.0
Q ss_pred CHHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCC
Q 016513 72 DKEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGME 148 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e 148 (388)
+.+++ ..+++.|+|.|++-- ..+++.+.++.+.+++. .+.+++.+-|.+-.+ ...+. +|.|.+.-..+...
T Consensus 90 ~~~~i-~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~---~a~~~Gad~Ig~~~~g~t~~ 163 (232)
T 3igs_A 90 FLDDV-DALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDDGL---ACQRLGADIIGTTMSGYTTP 163 (232)
T ss_dssp SHHHH-HHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHHHH---HHHHTTCSEEECTTTTSSSS
T ss_pred cHHHH-HHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHHHH---HHHhCCCCEEEEcCccCCCC
Confidence 45667 777889999987643 34677888888877664 466777665543332 22233 67775421111110
Q ss_pred --CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 149 --IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 149 --~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
.....+. ..+++ ++.++|++.... .-|. .|+..+...|+|++++. |++.+ |.+..+.+
T Consensus 164 ~~~~~~~~~-~i~~l----~~~~ipvIA~GG---------I~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~ 223 (232)
T 3igs_A 164 DTPEEPDLP-LVKAL----HDAGCRVIAEGR---------YNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWY 223 (232)
T ss_dssp SCCSSCCHH-HHHHH----HHTTCCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred CCCCCCCHH-HHHHH----HhcCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHH
Confidence 1111221 11222 223899986432 3333 46677788899999996 55655 77777776
Q ss_pred HHHHHH
Q 016513 227 RRICIE 232 (388)
Q Consensus 227 ~~i~~~ 232 (388)
.+.+++
T Consensus 224 ~~~i~~ 229 (232)
T 3igs_A 224 NDALKK 229 (232)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
No 63
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=90.80 E-value=0.98 Score=40.40 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=71.7
Q ss_pred CHHHHHhccccCCCCEEEeCCCC--Ch-hhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 72 DKEDILRWGVPNNIDMIALSFVR--KG-SDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~--sa-~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+.+ +.+++.|+|+|.+.... ++ +.+.++.+.+.+.-.+..++..+-|.+-... ..+. +|.|+++.....-
T Consensus 77 ~~~~i-~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~---~~~~G~d~i~~~~~g~t~ 152 (223)
T 1y0e_A 77 TSKEV-DELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKN---AARLGFDYIGTTLHGYTS 152 (223)
T ss_dssp SHHHH-HHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHH---HHHTTCSEEECTTTTSST
T ss_pred cHHHH-HHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHH---HHHcCCCEEEeCCCcCcC
Confidence 45667 77888999999876543 22 2334444444333224566666666543322 2222 6888876432211
Q ss_pred -CCChh-hHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHH
Q 016513 148 -EIPVE-KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKI 225 (388)
Q Consensus 148 -e~~~~-~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~ 225 (388)
..+.. ..+. ...+-+.+...+.|++.... .-+. .|+..+...|+|++++. +++-+ |.+..+.
T Consensus 153 ~~~~~~~~~~~-~~~~~~~~~~~~ipvia~GG---------I~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~ 216 (223)
T 1y0e_A 153 YTQGQLLYQND-FQFLKDVLQSVDAKVIAEGN---------VITP---DMYKRVMDLGVHCSVVG--GAITR-PKEITKR 216 (223)
T ss_dssp TSTTCCTTHHH-HHHHHHHHHHCCSEEEEESS---------CCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHH
T ss_pred CCCCCCCCccc-HHHHHHHHhhCCCCEEEecC---------CCCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHHHH
Confidence 11110 1111 11222223345899887443 2233 45667777899999997 34434 6666555
Q ss_pred HH
Q 016513 226 MR 227 (388)
Q Consensus 226 ~~ 227 (388)
+.
T Consensus 217 ~~ 218 (223)
T 1y0e_A 217 FV 218 (223)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 64
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=90.58 E-value=0.97 Score=44.95 Aligned_cols=148 Identities=20% Similarity=0.231 Sum_probs=97.2
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHH---HccCCCCceEEEee--cCHHhHhhHHHHHhhcCceeecCCcccCCCChh
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKV---LGPHAKNIQLMSKV--ENQEGVVNFDDILRETDSFMVARGDLGMEIPVE 152 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~---l~~~~~~~~IiakI--Et~~av~nldeI~~~~Dgi~igrgDLg~e~~~~ 152 (388)
....+.|+|.|-+. |.+.++++.+.++ |...+-+++++|-| .-+.++..+++..+..|.+=|.||.+|-. .
T Consensus 45 ~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~---~ 120 (406)
T 4g9p_A 45 LELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG---R 120 (406)
T ss_dssp HHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST---H
T ss_pred HHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc---c
Confidence 45567899998887 7787777776654 55567789999988 34568888888888899999999988632 2
Q ss_pred hHHHHHHHHHHHHHHcCCCE--EEh-----hhHHHHhh----cCCCCChH-----HH---H---HHHHHHHcCC--ceeE
Q 016513 153 KIFLAQKMMIYKCNLVGKPV--VTA-----TQMLESMI----KSPRPTRA-----EA---T---DVANAVLDGT--DCVM 208 (388)
Q Consensus 153 ~v~~~qk~ii~~c~~~gkpv--i~a-----tq~lesM~----~~~~ptra-----Ev---~---dv~~av~~g~--d~i~ 208 (388)
+...-.+.++++|+++|+|+ ++- -.+|+.+- ..|.|.-+ |. + .+.-+...|. |=++
T Consensus 121 k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~~~iv 200 (406)
T 4g9p_A 121 HKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLV 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCChhheE
Confidence 33445578999999999997 332 23444332 24455321 21 0 1111223454 5688
Q ss_pred eccccCCCCCHHHHHHHHHHHHHH
Q 016513 209 LSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 209 Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
+|--.+ .|..+|+.-+.+.++
T Consensus 201 iS~KaS---dv~~~i~aYr~la~~ 221 (406)
T 4g9p_A 201 LSAKVS---KARDLVWVYRELARR 221 (406)
T ss_dssp EEEECS---SHHHHHHHHHHHHHH
T ss_pred EEeecC---CHHHHHHHHHHHHHh
Confidence 886554 477777776666554
No 65
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=89.92 E-value=2.1 Score=40.51 Aligned_cols=194 Identities=14% Similarity=0.146 Sum_probs=111.3
Q ss_pred CChhCHHHHHhccccCCCCEEEeCC-CCC-----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCcee-
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSF-VRK-----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFM- 139 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sf-V~s-----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~- 139 (388)
++..++..|.+...+.|++.|=+.+ +.. ..|..++.+.+.+. +++.+.+.+.+.++ ++..++. .|.+.
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~---i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLKG---FEAAVAAGAKEVVI 99 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHHH---HHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHHh---HHHHHHCCCCEEEE
Confidence 4666777775677789999987753 322 14556666666543 24444444455444 3344433 46433
Q ss_pred -ecCCcc----cCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCC---CCChHHHHHHHH-HHHcCCceeEec
Q 016513 140 -VARGDL----GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSP---RPTRAEATDVAN-AVLDGTDCVMLS 210 (388)
Q Consensus 140 -igrgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~---~ptraEv~dv~~-av~~g~d~i~Ls 210 (388)
++-.|. -...+.++.....+..++.|+++|+++-+..-+- ...| +-+..++.+++. +...|+|.+.|.
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 176 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCA---LGCPYEGKISPAKVAEVTKKFYSMGCYEISLG 176 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETT---TCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE---eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 333332 1123456677777889999999999985321100 1111 224455666555 567899999996
Q ss_pred cccCCCCCHHHHHHHHHHHHHHHh-cccchHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCc
Q 016513 211 GESAAGAYPEIAVKIMRRICIEAE-SSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGG 283 (388)
Q Consensus 211 ~eta~G~~P~~~v~~~~~i~~~aE-~~~~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG 283 (388)
+|.=.-.|.+.-+.++.+.++.- ..+.. ..+. + .-++.+-...|-+.+++.|= -|-.|
T Consensus 177 -DT~G~~~P~~~~~lv~~l~~~~~~~~i~~-------H~Hn----~--~Gla~An~laA~~aGa~~vd-~tv~G 235 (298)
T 2cw6_A 177 -DTIGVGTPGIMKDMLSAVMQEVPLAALAV-------HCHD----T--YGQALANTLMALQMGVSVVD-SSVAG 235 (298)
T ss_dssp -ETTSCCCHHHHHHHHHHHHHHSCGGGEEE-------EEBC----T--TSCHHHHHHHHHHTTCCEEE-EBTTS
T ss_pred -CCCCCcCHHHHHHHHHHHHHhCCCCeEEE-------EECC----C--CchHHHHHHHHHHhCCCEEE-eeccc
Confidence 67666789998888888876531 11110 0011 1 12344445666678888543 36654
No 66
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.77 E-value=3.1 Score=40.46 Aligned_cols=111 Identities=13% Similarity=0.198 Sum_probs=66.4
Q ss_pred HHHHhccccCCCCEEEeCCCCC-hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceee-cCC---cccC
Q 016513 74 EDILRWGVPNNIDMIALSFVRK-GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMV-ARG---DLGM 147 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~s-a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~i-grg---DLg~ 147 (388)
+.+ +.+.+.|+|+|.+++-.. .+.++.+++ . .+.++.++-|.+-.. ...+. +|+|.+ |+. -.|.
T Consensus 113 ~~~-~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~a~---~a~~~GaD~i~v~g~~~GGh~g~ 182 (369)
T 3bw2_A 113 AKL-AVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEEAR---AVEAAGADAVIAQGVEAGGHQGT 182 (369)
T ss_dssp HHH-HHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHHHH---HHHHTTCSEEEEECTTCSEECCC
T ss_pred HHH-HHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHHHH---HHHHcCCCEEEEeCCCcCCcCCC
Confidence 344 778899999999987653 456666554 2 467888887765332 22222 799998 642 1122
Q ss_pred CCC--------hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 148 EIP--------VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 148 e~~--------~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
..+ ...+ ...+++ ....++|++.+..+- .-.++..++..|+|+++++
T Consensus 183 ~~~~~~~~~~~~~~~-~~l~~i---~~~~~iPViaaGGI~------------~~~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 183 HRDSSEDDGAGIGLL-SLLAQV---REAVDIPVVAAGGIM------------RGGQIAAVLAAGADAAQLG 237 (369)
T ss_dssp SSCCGGGTTCCCCHH-HHHHHH---HHHCSSCEEEESSCC------------SHHHHHHHHHTTCSEEEES
T ss_pred cccccccccccccHH-HHHHHH---HHhcCceEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 111 1111 112222 223589999876432 2246778888999999985
No 67
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.73 E-value=1 Score=50.08 Aligned_cols=127 Identities=14% Similarity=0.175 Sum_probs=74.3
Q ss_pred hhCHHHHHhccccCCCCEEEeCC----C-----------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh
Q 016513 70 EKDKEDILRWGVPNNIDMIALSF----V-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE 134 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sf----V-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~ 134 (388)
..+...+++.+.+.|+|+|-+.+ . ++++.+.++.+.+.+. -++.+++|+ ++ .+.++.+++..
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~ 723 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARA 723 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHH
Confidence 34444444666678999999844 2 3445555555555433 257899998 33 34455555554
Q ss_pred -----cCceeec-----------------------CCcccCCCChhhHHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcC
Q 016513 135 -----TDSFMVA-----------------------RGDLGMEIPVEKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKS 185 (388)
Q Consensus 135 -----~Dgi~ig-----------------------rgDLg~e~~~~~v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~ 185 (388)
+|+|.+. |...+---+....+.....+-+..++. +.|+|....+-
T Consensus 724 ~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~------ 797 (1025)
T 1gte_A 724 AKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGID------ 797 (1025)
T ss_dssp HHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC------
T ss_pred HHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcC------
Confidence 6998881 111111112233333333333334444 78988755432
Q ss_pred CCCChHHHHHHHHHHHcCCceeEecc
Q 016513 186 PRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 186 ~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
...|+..++..|+|++|+..
T Consensus 798 ------s~~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 798 ------SAESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp ------SHHHHHHHHHTTCSEEEESH
T ss_pred ------CHHHHHHHHHcCCCEEEEee
Confidence 34577888889999999964
No 68
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.72 E-value=1 Score=39.86 Aligned_cols=131 Identities=13% Similarity=0.144 Sum_probs=73.1
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee--cCHHhHhhHHHHHhh-cCceeecCCcccCCCChhhH
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--ENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKI 154 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--Et~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v 154 (388)
+.+.+.|+|+|.++--...+.++++++.+++.|..+ -++.. .|+.. .++++.+. .|.+-+.++-.+...+....
T Consensus 71 ~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~-gv~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~ 147 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGV-VVDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFDL 147 (207)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEE-EEECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCCT
T ss_pred HHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCce-EEEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCch
Confidence 677889999999876666678888888887665443 12232 13332 12233222 67762333322111111111
Q ss_pred HHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHH
Q 016513 155 FLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 228 (388)
Q Consensus 155 ~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~ 228 (388)
. +++-+.+.. ..|+++...+ .|. .+..++..|+|++...+--.....|.++++.+.+
T Consensus 148 ~---~~i~~~~~~-~~pi~v~GGI--------~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 148 N---GLLAAGEKA-RVPFSVAGGV--------KVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp H---HHHHHHHHH-TSCEEEESSC--------CGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred H---HHHHHhhCC-CCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 1 333333332 6777653221 222 4577789999999987654444568888877654
No 69
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=89.61 E-value=1.6 Score=38.77 Aligned_cols=137 Identities=7% Similarity=0.008 Sum_probs=79.4
Q ss_pred HHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceee-c--CCcccCCCCh
Q 016513 75 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV-A--RGDLGMEIPV 151 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~i-g--rgDLg~e~~~ 151 (388)
.+ +.+.+.|+|+|.++--.. ++..++.+.+.+.| ..++.-+-+....+.+.++...+|.+++ + +|==|...++
T Consensus 76 ~i-~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~ 151 (220)
T 2fli_A 76 YV-EAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIP 151 (220)
T ss_dssp GH-HHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCG
T ss_pred HH-HHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCH
Confidence 45 667888999998876555 56666666666554 3445445333334455555666787744 2 3222333343
Q ss_pred hhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHH
Q 016513 152 EKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 229 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i 229 (388)
..+.. .+++-+.+.+. +.|++++.. + .| .++..+...|+|++..++--..+..|.++++.+.+.
T Consensus 152 ~~~~~-i~~~~~~~~~~~~~~~i~v~GG-I-------~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 152 ECLEK-VATVAKWRDEKGLSFDIEVDGG-V-------DN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp GGHHH-HHHHHHHHHHTTCCCEEEEESS-C-------CT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHhcCCCceEEEECc-C-------CH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 22221 22333333333 567665332 1 23 344566666999999987665667899998887654
No 70
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=89.37 E-value=1.2 Score=43.45 Aligned_cols=124 Identities=19% Similarity=0.176 Sum_probs=69.2
Q ss_pred hCHHHHHhccccC--CCCEEEeCCC-CChhhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 71 KDKEDILRWGVPN--NIDMIALSFV-RKGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 71 ~D~~di~~~~l~~--g~d~v~~sfV-~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
.+.+.+ ...++. |+|.+.+..- .+..++.+..+.+.+...++.++++ +-|++.. ....+. +|+|.++-|-=
T Consensus 118 ~~~~~~-~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A---~~a~~aGaD~I~v~~g~G 193 (351)
T 2c6q_A 118 SDFEQL-EQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMV---EELILSGADIIKVGIGPG 193 (351)
T ss_dssp HHHHHH-HHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCS
T ss_pred HHHHHH-HHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHH---HHHHHhCCCEEEECCCCC
Confidence 344555 555665 8998766432 1233322222333332224666654 6665433 333333 89998863210
Q ss_pred cCC-------CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 146 GME-------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 146 g~e-------~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
+.+ .+.+ ...+...+.++++..+.|+|.+..+. .-.|++.|+..|||++++..
T Consensus 194 ~~~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~------------~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 194 SVCTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCS------------CPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp TTBCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred cCcCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCC------------CHHHHHHHHHcCCCceeccH
Confidence 001 0111 22334556667777899999765443 34789999999999998864
No 71
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=89.29 E-value=1.9 Score=39.33 Aligned_cols=109 Identities=10% Similarity=0.104 Sum_probs=68.6
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+..+...+++.+++.|++.|=+.+ ++....+.++++..+. ++..+-+-. .---+.++.-+++ +|+++.+-.|
T Consensus 27 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d--- 99 (224)
T 1vhc_A 27 NADDILPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN--- 99 (224)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC---
Confidence 444555554888899999999986 4555555555454443 244444432 2112455555544 7999766333
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
..+++.|++.|+|++..+ .| .+++..|...|+|.+.+
T Consensus 100 -----------~~v~~~ar~~g~~~i~Gv-----------~t---~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -----------PKIVKLCQDLNFPITPGV-----------NN---PMAIEIALEMGISAVKF 136 (224)
T ss_dssp -----------HHHHHHHHHTTCCEECEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEecc-----------CC---HHHHHHHHHCCCCEEEE
Confidence 346788999999987531 12 23347788999999998
No 72
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=89.11 E-value=3.7 Score=38.54 Aligned_cols=134 Identities=14% Similarity=0.052 Sum_probs=79.7
Q ss_pred CHHHHHhccccCCCCEEEeC-CCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCC-C
Q 016513 72 DKEDILRWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGME-I 149 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e-~ 149 (388)
|...+ ..+...|+|+|++. -.-+.++++++.+...+.| +.+++-+-|.+-++...+. -+|.|-+...||... .
T Consensus 124 d~~qv-~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lG--l~~lvev~t~ee~~~A~~~--Gad~IGv~~r~l~~~~~ 198 (272)
T 3qja_A 124 QPYQI-HEARAHGADMLLLIVAALEQSVLVSMLDRTESLG--MTALVEVHTEQEADRALKA--GAKVIGVNARDLMTLDV 198 (272)
T ss_dssp SHHHH-HHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHH--TCSEEEEESBCTTTCCB
T ss_pred CHHHH-HHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHHC--CCCEEEECCCccccccc
Confidence 33456 67788999999982 3345677888888777655 3455555555443332221 278888887676432 3
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHH
Q 016513 150 PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 227 (388)
Q Consensus 150 ~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~ 227 (388)
+++.+. ++.... ..++|++.. ...-|. .|+......|+|+++...---....|.++++.+.
T Consensus 199 dl~~~~----~l~~~v-~~~~pvVae---------gGI~t~---edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~ 259 (272)
T 3qja_A 199 DRDCFA----RIAPGL-PSSVIRIAE---------SGVRGT---ADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLV 259 (272)
T ss_dssp CTTHHH----HHGGGS-CTTSEEEEE---------SCCCSH---HHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHH
T ss_pred CHHHHH----HHHHhC-cccCEEEEE---------CCCCCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHH
Confidence 333332 222111 116787753 233334 4667778889999999654444567877776654
No 73
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.00 E-value=2.6 Score=38.83 Aligned_cols=104 Identities=14% Similarity=0.251 Sum_probs=62.7
Q ss_pred EEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHH---------
Q 016513 88 IALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQ--------- 158 (388)
Q Consensus 88 v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~q--------- 158 (388)
|.+=...+++++..+.+.+-+.|-+ .|-.-.-|+.+++.+.+|.+..+.+.+|-|-. +..+.+..+.
T Consensus 37 v~Vir~~~~~~a~~~a~al~~gGi~-~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTV---lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 37 IPVIAIDNAEDIIPLGKVLAENGLP-AAEITFRSDAAVEAIRLLRQAQPEMLIGAGTI---LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTCEEEEECC---CSHHHHHHHHHHTCSEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCCC-EEEEeCCCCCHHHHHHHHHHhCCCCEEeECCc---CCHHHHHHHHHcCCCEEEe
Confidence 4445556667776666666554433 12223446667777777666555566665531 2233333332
Q ss_pred ----HHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 159 ----KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 159 ----k~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
..+++.|+++|.|++-- -.-.+++..|...|+|.+-+
T Consensus 113 P~~~~~vi~~~~~~gi~~ipG--------------v~TptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 113 PGFNPNTVRACQEIGIDIVPG--------------VNNPSTVEAALEMGLTTLKF 153 (232)
T ss_dssp SSCCHHHHHHHHHHTCEEECE--------------ECSHHHHHHHHHTTCCEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEcC--------------CCCHHHHHHHHHcCCCEEEE
Confidence 47889999999998421 11235568899999999987
No 74
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.61 E-value=5.1 Score=36.46 Aligned_cols=109 Identities=9% Similarity=0.060 Sum_probs=66.9
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+..+...+++.+++.|++.|=+.+ ++....+.++++..+. ++..+-+-. .---+.++.-+++ +|++..+--|
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d--- 108 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT--- 108 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC---
T ss_pred CHHHHHHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC---
Confidence 344444444788899999999986 4455444454444333 344444432 2112444444444 7898865322
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
..+++.|+++|.|.+..+ ..| +++..|...|+|.+.+
T Consensus 109 -----------~~v~~~~~~~g~~~i~G~---------~t~-----~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 109 -----------EDILEAGVDSEIPLLPGI---------STP-----SEIMMGYALGYRRFKL 145 (225)
T ss_dssp -----------HHHHHHHHHCSSCEECEE---------CSH-----HHHHHHHTTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEEee---------CCH-----HHHHHHHHCCCCEEEE
Confidence 367889999999987431 122 3457888999999998
No 75
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=88.60 E-value=1.6 Score=40.12 Aligned_cols=151 Identities=13% Similarity=0.023 Sum_probs=91.2
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgD 144 (388)
|..|+.|.+.+.+.+.+.|++.|.++ +..+...++.+.. +.+.+-|==|.|-.+.+..+.. .+ +--|.-.
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~g----v~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdE 82 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLRK----VKLCVVADFPFGALPTASRIALVSR-LAEVADE 82 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCSS----SEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhCC----CeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCE
Confidence 55578887777688889999999876 4567777776642 7777766433443333322221 12 2222222
Q ss_pred cc--CCCC------hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccC-
Q 016513 145 LG--MEIP------VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESA- 214 (388)
Q Consensus 145 Lg--~e~~------~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta- 214 (388)
+- +.++ ++.+..-.+.+.++|...+.+||+.|-.| |..|+..... +...|+|.|=-|.==.
T Consensus 83 ID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTSTGf~~ 153 (226)
T 1vcv_A 83 IDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSSTGFAE 153 (226)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECCCSCCC
T ss_pred EEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeCCCCCc
Confidence 21 2222 24555566677777766677889877655 5677765555 6778999986552111
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHh
Q 016513 215 ---------AGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 215 ---------~G~~P~~~v~~~~~i~~~aE 234 (388)
.|.--.+.|+.|++.++++-
T Consensus 154 ~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 154 EAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp HHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 12223578899998877554
No 76
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.57 E-value=2.5 Score=38.00 Aligned_cols=137 Identities=9% Similarity=0.063 Sum_probs=77.2
Q ss_pred HHHHhccccCCCCEEEeCCC--CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCcee---ecCCcccCC
Q 016513 74 EDILRWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFM---VARGDLGME 148 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV--~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~---igrgDLg~e 148 (388)
..+ +.+.+.|+|+|.++-- .+ ++..++.+.+.+.|. .++.-+-+..-.+.+.++...+|.++ +.+|--|..
T Consensus 82 ~~v-~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g~--~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~ 157 (230)
T 1rpx_A 82 QRV-PDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLGA--KAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQS 157 (230)
T ss_dssp HHH-HHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTTS--EEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCC
T ss_pred HHH-HHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcCC--cEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCcc
Confidence 355 6778899999988776 44 455566666655543 34444422223445556666678663 335533444
Q ss_pred CChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 149 IPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
.....+.. .+++-+.+.+. +.|+++...+ .|. .+..++..|+|++..++--.....|.++++.+
T Consensus 158 ~~~~~~~~-i~~l~~~~~~~~~~~pi~v~GGI--------~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l 223 (230)
T 1rpx_A 158 FIESQVKK-ISDLRKICAERGLNPWIEVDGGV--------GPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKGI 223 (230)
T ss_dssp CCTTHHHH-HHHHHHHHHHHTCCCEEEEESSC--------CTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHH
T ss_pred ccHHHHHH-HHHHHHHHHhcCCCceEEEECCC--------CHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHHH
Confidence 44322222 22333333222 5776553321 232 33556667999999986655556788888776
Q ss_pred HH
Q 016513 227 RR 228 (388)
Q Consensus 227 ~~ 228 (388)
.+
T Consensus 224 ~~ 225 (230)
T 1rpx_A 224 KT 225 (230)
T ss_dssp HT
T ss_pred HH
Confidence 53
No 77
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=88.54 E-value=3.4 Score=37.00 Aligned_cols=107 Identities=12% Similarity=0.103 Sum_probs=66.1
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+..+...+++.+++.|++.|-+.+ ++....+.++.+. + ++..+-+-. .---+.++.-+++ +|++..+-.|.
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~~~-~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d~-- 94 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITL-RTEKGLEALKALR-K--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLLE-- 94 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEEC-SSTHHHHHHHHHT-T--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCCH--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC-CChHHHHHHHHHh-C--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCCH--
Confidence 344555554788899999999986 4555544444433 3 444444432 1112455555544 78887653222
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
.++++|++.|.|.+..+ -| .+++..+...|+|.+.+
T Consensus 95 ------------~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 95 ------------EVAALAQARGVPYLPGV-----------LT---PTEVERALALGLSALKF 130 (207)
T ss_dssp ------------HHHHHHHHHTCCEEEEE-----------CS---HHHHHHHHHTTCCEEEE
T ss_pred ------------HHHHHHHHhCCCEEecC-----------CC---HHHHHHHHHCCCCEEEE
Confidence 57788999999987532 12 23457788899999988
No 78
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.50 E-value=3.6 Score=37.14 Aligned_cols=109 Identities=6% Similarity=0.050 Sum_probs=67.9
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+..+...+++.+++.|++.|=+.+ ++....+.++++..+. .+..+-+-. .---++++.-+++ +|++..+--|
T Consensus 26 ~~~~~~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d--- 98 (214)
T 1wbh_A 26 KLEHAVPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT--- 98 (214)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC---
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC---
Confidence 444544554888899999999996 4555555555444433 234443322 1112455554544 7999866322
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
..+++.|+++|.|.+..+ -| .+++..+...|+|.+.+
T Consensus 99 -----------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -----------EPLLKAATEGTIPLIPGI-----------ST---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp -----------HHHHHHHHHSSSCEEEEE-----------SS---HHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHhCCCEEEec-----------CC---HHHHHHHHHCCCCEEEE
Confidence 267889999999987532 12 23447888999999998
No 79
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=88.02 E-value=6.6 Score=37.74 Aligned_cols=158 Identities=14% Similarity=0.104 Sum_probs=98.8
Q ss_pred CChhCHHHHHhccccCCCCEEEeC-CCCChhhHHHHHHHHccCCCCceEEEee-cCHHhHhhHHHHHhh--cC--ceeec
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE--TD--SFMVA 141 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~--~D--gi~ig 141 (388)
++..|+..|++...+.|++.|=+- ++-+++|.+.++.+... .+++.+.+.. =+.++++..-+-+.- .| .++++
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEec
Confidence 355677777466667899998774 45578787777665543 3566666664 345565533222221 23 25555
Q ss_pred CCcccC----CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHH-HcCCceeEeccccCCC
Q 016513 142 RGDLGM----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAV-LDGTDCVMLSGESAAG 216 (388)
Q Consensus 142 rgDLg~----e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av-~~g~d~i~Ls~eta~G 216 (388)
-.|+-. ....++.....+.+++.|+++|+.+.+... ...+-+...+.+++..+ ..|+|.|.| .+|.=.
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l-~DT~G~ 176 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNI-PDTTGY 176 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEEC-CBSSSC
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEe-cCccCC
Confidence 555422 233456666667889999999999865432 11223345556666654 459999999 588878
Q ss_pred CCHHHHHHHHHHHHHHH
Q 016513 217 AYPEIAVKIMRRICIEA 233 (388)
Q Consensus 217 ~~P~~~v~~~~~i~~~a 233 (388)
-.|.++-+.+..+.++.
T Consensus 177 ~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNV 193 (325)
T ss_dssp CCHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 88988888877776543
No 80
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=87.71 E-value=2 Score=42.40 Aligned_cols=120 Identities=19% Similarity=0.308 Sum_probs=68.4
Q ss_pred CHHHHHhccccCCCCEEEe--CCCCChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 72 DKEDILRWGVPNNIDMIAL--SFVRKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~--sfV~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+.+ ..+++.|+|+|.+ ++- +++.+.++.+.+.+.-.++++++ .+-+.+-. ....+. +|+|.++-+- |.
T Consensus 154 ~~~~a-~~~~~~G~d~i~i~~~~g-~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a---~~a~~~Gad~I~vg~~~-G~ 227 (404)
T 1eep_A 154 TIERV-EELVKAHVDILVIDSAHG-HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAA---LDLISVGADCLKVGIGP-GS 227 (404)
T ss_dssp HHHHH-HHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHH---HHHHTTTCSEEEECSSC-ST
T ss_pred HHHHH-HHHHHCCCCEEEEeCCCC-ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHH---HHHHhcCCCEEEECCCC-Cc
Confidence 45556 7788899999987 442 33333333333333212466775 56665433 333333 7999995211 11
Q ss_pred --------CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 148 --------EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 148 --------e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
..+.+. ......+.+.+...+.|+|.+..+- ...|+..++..|+|++++.
T Consensus 228 ~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~GGI~------------~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 228 ICTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIADGGIR------------FSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp TSHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEESCCC------------SHHHHHHHHHHTCSEEEEC
T ss_pred CcCccccCCCCcch-HHHHHHHHHHHhhcCceEEEECCCC------------CHHHHHHHHHcCCCHHhhC
Confidence 011111 2233444455555689998654332 3468899999999999994
No 81
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=87.69 E-value=4.5 Score=36.03 Aligned_cols=132 Identities=13% Similarity=0.029 Sum_probs=71.4
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHH
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLA 157 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~ 157 (388)
+.+.+.|+|+|.++.-. ..++.+++... ...+..-+.|.+-+.. ....-+|.+++++.--+...+-. .+.-
T Consensus 82 ~~a~~~gad~v~l~~~~--~~~~~~~~~~~----~~~ig~sv~t~~~~~~--a~~~gaD~i~~~~~f~~~~~~g~-~~~~ 152 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGS--FSPKQIRARFP----HLHIGRSVHSLEEAVQ--AEKEDADYVLFGHVFETDCKKGL-EGRG 152 (221)
T ss_dssp HHHHTTTCCEEEECTTS--CCHHHHHHHCT----TCEEEEEECSHHHHHH--HHHTTCSEEEEECCC-----------CH
T ss_pred HHHHHcCCCEEEeCCCc--cCHHHHHHHCC----CCEEEEEcCCHHHHHH--HHhCCCCEEEECCccccCCCCCC-CCCC
Confidence 44677899999887542 34555555442 3445555555443322 12223799999863111111000 0111
Q ss_pred HHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHH
Q 016513 158 QKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 231 (388)
Q Consensus 158 qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~ 231 (388)
.+.+-+.++..++|++.+..+ +. .++..++..|+|++.+++---..+.|.++++.+.+.++
T Consensus 153 ~~~l~~~~~~~~~pvia~GGI----------~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 153 VSLLSDIKQRISIPVIAIGGM----------TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLK 213 (221)
T ss_dssp HHHHHHHHHHCCSCEEEESSC----------CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCC----------CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHH
Confidence 122222334458998875532 22 35577777899999997654434567787777766554
No 82
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.31 E-value=2.1 Score=40.98 Aligned_cols=110 Identities=10% Similarity=0.164 Sum_probs=65.6
Q ss_pred HHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceee-cCCcccCCCC--
Q 016513 74 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV-ARGDLGMEIP-- 150 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~i-grgDLg~e~~-- 150 (388)
+.+ +.+.+.|+|+|.+++-...+.++.+++ . .+.++.++-|.+-...+ ...-+|+|.+ |+. -|-..+
T Consensus 87 ~~~-~~~~~~g~d~V~~~~g~p~~~~~~l~~----~--gi~vi~~v~t~~~a~~~--~~~GaD~i~v~g~~-~GG~~G~~ 156 (328)
T 2gjl_A 87 EYR-AAIIEAGIRVVETAGNDPGEHIAEFRR----H--GVKVIHKCTAVRHALKA--ERLGVDAVSIDGFE-CAGHPGED 156 (328)
T ss_dssp HHH-HHHHHTTCCEEEEEESCCHHHHHHHHH----T--TCEEEEEESSHHHHHHH--HHTTCSEEEEECTT-CSBCCCSS
T ss_pred HHH-HHHHhcCCCEEEEcCCCcHHHHHHHHH----c--CCCEEeeCCCHHHHHHH--HHcCCCEEEEECCC-CCcCCCCc
Confidence 444 778899999999988665544444443 2 46788888776543321 2223799988 431 111111
Q ss_pred -hhhHHHHHHHHHHHHH-HcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 151 -VEKIFLAQKMMIYKCN-LVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 151 -~~~v~~~qk~ii~~c~-~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
...+ ..+...+ ..++|++.+..+- .-.|+..++..|+|+++++
T Consensus 157 ~~~~~-----~~l~~v~~~~~iPviaaGGI~------------~~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 157 DIPGL-----VLLPAAANRLRVPIIASGGFA------------DGRGLVAALALGADAINMG 201 (328)
T ss_dssp CCCHH-----HHHHHHHTTCCSCEEEESSCC------------SHHHHHHHHHHTCSEEEES
T ss_pred cccHH-----HHHHHHHHhcCCCEEEECCCC------------CHHHHHHHHHcCCCEEEEC
Confidence 1122 1222222 3479999876432 1246778888899999985
No 83
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=87.13 E-value=3.5 Score=37.36 Aligned_cols=118 Identities=9% Similarity=0.067 Sum_probs=67.9
Q ss_pred HHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCcee-e-c-CCcccCCCC
Q 016513 74 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFM-V-A-RGDLGMEIP 150 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~-i-g-rgDLg~e~~ 150 (388)
+.+ +.+++.|+|+|.++.. ..++.+++.+.+++.|.+. +..+......+.+..+.+.+|+++ + . +|-.|..-+
T Consensus 99 ~~~-~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~~--~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 99 NFL-AEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIKT--VFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHH-HHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCEE--EEEECTTCCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHH-HHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCCe--EEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 566 7888999999999854 5578888888887776543 334433234556777777788543 2 2 232333211
Q ss_pred h-hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 151 V-EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 151 ~-~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
. +......+++ ++..+.|++.... .- ...|+..+...|+|++.+.
T Consensus 175 ~~~~~~~~i~~l---~~~~~~pi~~~GG---------I~---~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 IPKTAYDLLRRA---KRICRNKVAVGFG---------VS---KREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp CCHHHHHHHHHH---HHHCSSCEEEESC---------CC---SHHHHHHHHHTTCSEEEEC
T ss_pred CChhHHHHHHHH---HhhcCCCEEEEee---------cC---CHHHHHHHHHcCCCEEEEc
Confidence 1 1222222233 2334789876443 22 2245566777899999985
No 84
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=86.96 E-value=2.6 Score=38.50 Aligned_cols=146 Identities=15% Similarity=0.090 Sum_probs=91.8
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgD 144 (388)
|..|..|.+.+.+.+.+.|++.|+++ +..++..++.+. +.++.+.+-+=-|.|-.+.+..+.. -+++-.|.-.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 55577787777688888999999865 456777777764 3457787777666654444433322 2333333333
Q ss_pred ccCCCCh--------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccCC
Q 016513 145 LGMEIPV--------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAA 215 (388)
Q Consensus 145 Lg~e~~~--------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta~ 215 (388)
+.+-+++ +.+..-.+.+.++|...+.|+|+-|-. +|..|+..... +...|+|.|=-| .
T Consensus 88 vd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs----T 154 (220)
T 1ub3_A 88 VDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS----T 154 (220)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC----C
T ss_pred EEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC----C
Confidence 3223322 345555567777776667778876654 46677766555 677899998655 3
Q ss_pred CCC----HHHHHHHHHHHH
Q 016513 216 GAY----PEIAVKIMRRIC 230 (388)
Q Consensus 216 G~~----P~~~v~~~~~i~ 230 (388)
|.. -.+.++.|++.+
T Consensus 155 Gf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 155 GFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp SSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHhh
Confidence 443 358888888764
No 85
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=86.87 E-value=1.1 Score=40.39 Aligned_cols=132 Identities=12% Similarity=0.059 Sum_probs=75.2
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceE-EEeecCHHhHhhHHHHHh-hcCceeecCCcc----cCCCCh
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQL-MSKVENQEGVVNFDDILR-ETDSFMVARGDL----GMEIPV 151 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~I-iakIEt~~av~nldeI~~-~~Dgi~igrgDL----g~e~~~ 151 (388)
+.+.+.|+|+|.++-....+.++++.+.+++.|....+ +.-.-|++ .+.++.+ -.|.+.+.++-. |...+.
T Consensus 77 ~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 153 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGIGWTT 153 (218)
T ss_dssp HHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTCCSCH
T ss_pred HHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCCcCCH
Confidence 66778999999988776666678888888776654432 33335653 3444444 357554433211 223333
Q ss_pred hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHH
Q 016513 152 EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 231 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~ 231 (388)
+.+..+.+ .+..+.|+.+...+ +|..+ ..++..|+|++...+--.....|.+++ .+.+.++
T Consensus 154 ~~l~~i~~-----~~~~~~pi~v~GGI--------~~~~~-----~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 154 DDLDKMRQ-----LSALGIELSITGGI--------VPEDI-----YLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQID 214 (218)
T ss_dssp HHHHHHHH-----HHHTTCEEEEESSC--------CGGGG-----GGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHH-----HhCCCCCEEEECCC--------CHHHH-----HHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHH
Confidence 33333322 12246676653221 22222 457888999999975443345688877 6666554
No 86
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=86.79 E-value=3.1 Score=38.35 Aligned_cols=142 Identities=13% Similarity=0.116 Sum_probs=87.0
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh--------hcCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR--------ETDS 137 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--------~~Dg 137 (388)
|..|..|.+.+.+.+.+.|++.|+++ +..+ ..++.+.... .+.+.+-+==|.|-.+.+..+. =+|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 55577777777688888999999875 4556 5566664320 3566666633333222222221 1443
Q ss_pred ee--ecCCcccCCCChhhHHHHHHHHHHHHHHcCCCE--EEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccc
Q 016513 138 FM--VARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPV--VTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGE 212 (388)
Q Consensus 138 i~--igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpv--i~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~e 212 (388)
|= +..|.|- +.+..-.+.+.++|...|+|+ |+-|-.| |..|+..... +...|+|.|=-
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~~e~i~~a~ria~eaGADfVKT--- 167 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPLW---------DDKTLSLLVDSSRRAGADIVKT--- 167 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGGS---------CHHHHHHHHHHHHHTTCSEEES---
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccCC---------CHHHHHHHHHHHHHhCCCEEEe---
Confidence 31 1222221 256666678888999989997 7666433 5667765555 67789999754
Q ss_pred cCCCCCH-----HHHHHH--HHHHHH
Q 016513 213 SAAGAYP-----EIAVKI--MRRICI 231 (388)
Q Consensus 213 ta~G~~P-----~~~v~~--~~~i~~ 231 (388)
+.|..| .+.++. |++.+.
T Consensus 168 -sTG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 168 -STGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp -CCSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred -CCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 456665 788888 776653
No 87
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=86.63 E-value=16 Score=35.81 Aligned_cols=159 Identities=9% Similarity=0.122 Sum_probs=104.2
Q ss_pred CCChhCHHHHHhccccCCCCEEEe-CCCCChhhHHHHHHHHccCCCCceEEEeec-CHHhHhhHHHHHh-h-cC--ceee
Q 016513 67 TLTEKDKEDILRWGVPNNIDMIAL-SFVRKGSDLVNVRKVLGPHAKNIQLMSKVE-NQEGVVNFDDILR-E-TD--SFMV 140 (388)
Q Consensus 67 ~lt~~D~~di~~~~l~~g~d~v~~-sfV~sa~dv~~v~~~l~~~~~~~~IiakIE-t~~av~nldeI~~-~-~D--gi~i 140 (388)
.++..|+..|++...+.|++.|=+ +++-++.|.+.++++... .++..+.+..= +.++++..-+-+. + .| .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 357778888856656789998865 466778888888887653 35555554441 4555543322221 1 23 4566
Q ss_pred cCCccc----CCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccCC
Q 016513 141 ARGDLG----MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAA 215 (388)
Q Consensus 141 grgDLg----~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta~ 215 (388)
+-.|+- .....+++......+++.|+++|..+.+... ...+-+...+.+++. +...|+|.|.| .+|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l-~DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINI-PDTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEE-ECSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEe-cCccC
Confidence 666653 3445677778888899999999998765432 112223344455555 56789999999 58888
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 016513 216 GAYPEIAVKIMRRICIEA 233 (388)
Q Consensus 216 G~~P~~~v~~~~~i~~~a 233 (388)
.-.|.++-+.+..+.++.
T Consensus 182 ~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp CCCHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHhC
Confidence 888999888887777654
No 88
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=86.03 E-value=4 Score=39.05 Aligned_cols=116 Identities=11% Similarity=0.142 Sum_probs=61.0
Q ss_pred CCCCEEEeCCCC----------Ch----hhHHHHHHHHcc----CCCCceEEEeecCHHhHhhHHHHHh----h-cCcee
Q 016513 83 NNIDMIALSFVR----------KG----SDLVNVRKVLGP----HAKNIQLMSKVENQEGVVNFDDILR----E-TDSFM 139 (388)
Q Consensus 83 ~g~d~v~~sfV~----------sa----~dv~~v~~~l~~----~~~~~~IiakIEt~~av~nldeI~~----~-~Dgi~ 139 (388)
.|+|+|-+.|-. +. +.++.+|+...+ .|++..++.|+=.-...+++.++++ . +|+|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 389998776521 11 334444444421 1456889999732111123333333 2 68888
Q ss_pred ecCC-----cc-----cCCC----ChhhHHHHHHHHHHHHHH-c--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc
Q 016513 140 VARG-----DL-----GMEI----PVEKIFLAQKMMIYKCNL-V--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLD 202 (388)
Q Consensus 140 igrg-----DL-----g~e~----~~~~v~~~qk~ii~~c~~-~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~ 202 (388)
+.-+ ++ +.+. |....+. .-..+...++ . +.|+|....+- ...|+..++..
T Consensus 244 vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~-~~~~i~~i~~~~~~~ipVi~~GGI~------------~~~da~~~l~~ 310 (336)
T 1f76_A 244 ATNTTLDRSLVQGMKNCDQTGGLSGRPLQLK-STEIIRRLSLELNGRLPIIGVGGID------------SVIAAREKIAA 310 (336)
T ss_dssp ECCCBCCCTTSTTSTTTTCSSEEEEGGGHHH-HHHHHHHHHHHHTTSSCEEEESSCC------------SHHHHHHHHHH
T ss_pred EeCCcccccccccccccccCCCcCCchhHHH-HHHHHHHHHHHhCCCCCEEEECCCC------------CHHHHHHHHHC
Confidence 7522 21 0111 1111222 2233333333 4 78998765433 34577888899
Q ss_pred CCceeEecc
Q 016513 203 GTDCVMLSG 211 (388)
Q Consensus 203 g~d~i~Ls~ 211 (388)
|+|+|++..
T Consensus 311 GAd~V~igr 319 (336)
T 1f76_A 311 GASLVQIYS 319 (336)
T ss_dssp TCSEEEESH
T ss_pred CCCEEEeeH
Confidence 999999963
No 89
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=85.83 E-value=6.7 Score=36.87 Aligned_cols=129 Identities=12% Similarity=0.031 Sum_probs=77.4
Q ss_pred HHHHHhccccCCCCEEEeCC-CCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh----cCceeecCCcccC
Q 016513 73 KEDILRWGVPNNIDMIALSF-VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE----TDSFMVARGDLGM 147 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sf-V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~----~Dgi~igrgDLg~ 147 (388)
...+ ..+...|+|.|++-- .-+.++++++.+...+.| +.+++-+- |.+|+..+ +|-|-+..-||..
T Consensus 132 ~~qi-~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~t 202 (272)
T 3tsm_A 132 PYQV-YEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH------DEAEMERALKLSSRLLGVNNRNLRS 202 (272)
T ss_dssp THHH-HHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC------SHHHHHHHTTSCCSEEEEECBCTTT
T ss_pred HHHH-HHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC------CHHHHHHHHhcCCCEEEECCCCCcc
Confidence 3456 677889999977653 345677888877777654 44444443 34444332 5766666555533
Q ss_pred -CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 148 -EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 148 -e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
+..++....+.+.+ ..++|++. .+..-|.. |+..+...|+|+++...---....|.++++.+
T Consensus 203 ~~~dl~~~~~L~~~i-----p~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l 265 (272)
T 3tsm_A 203 FEVNLAVSERLAKMA-----PSDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRAL 265 (272)
T ss_dssp CCBCTHHHHHHHHHS-----CTTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHH
T ss_pred CCCChHHHHHHHHhC-----CCCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHH
Confidence 22333332222221 12677764 44555555 66677888999999976555667787777664
Q ss_pred H
Q 016513 227 R 227 (388)
Q Consensus 227 ~ 227 (388)
.
T Consensus 266 ~ 266 (272)
T 3tsm_A 266 L 266 (272)
T ss_dssp H
T ss_pred H
Confidence 3
No 90
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=85.76 E-value=2.1 Score=41.26 Aligned_cols=120 Identities=15% Similarity=0.207 Sum_probs=67.1
Q ss_pred ChhCHHHHHhccccCC--CCEEEeCCCC-C----hhhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhh-cCcee
Q 016513 69 TEKDKEDILRWGVPNN--IDMIALSFVR-K----GSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFM 139 (388)
Q Consensus 69 t~~D~~di~~~~l~~g--~d~v~~sfV~-s----a~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~Dgi~ 139 (388)
.+.+.+.+ +...+.| ++++.+.... + .+.++.+++.. +.+.++.. +-+. +......+. +|+|.
T Consensus 104 ~~~~~~~a-~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~----~~~~vi~G~v~s~---e~A~~a~~aGad~Iv 175 (336)
T 1ypf_A 104 KEDEYEFV-QQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHL----PESFVIAGNVGTP---EAVRELENAGADATK 175 (336)
T ss_dssp SHHHHHHH-HHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHC----TTSEEEEEEECSH---HHHHHHHHHTCSEEE
T ss_pred CHHHHHHH-HHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhC----CCCEEEECCcCCH---HHHHHHHHcCCCEEE
Confidence 34555555 6777888 9988764321 2 23444444433 23566655 5554 334444444 89999
Q ss_pred ecC--C-------cccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 140 VAR--G-------DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 140 igr--g-------DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
++- | ..+...| .+ ....+.+.+++.+.|+|.+..+- ...|+..++..|+|++|+.
T Consensus 176 vs~hgG~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------------~g~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 176 VGIGPGKVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------------TNGDVAKSIRFGATMVMIG 239 (336)
T ss_dssp ECSSCSTTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------------STHHHHHHHHTTCSEEEES
T ss_pred EecCCCceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------------CHHHHHHHHHcCCCEEEeC
Confidence 941 1 0111111 00 12233333445589999765433 3468899999999999995
Q ss_pred cc
Q 016513 211 GE 212 (388)
Q Consensus 211 ~e 212 (388)
.-
T Consensus 240 r~ 241 (336)
T 1ypf_A 240 SL 241 (336)
T ss_dssp GG
T ss_pred hh
Confidence 43
No 91
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=85.43 E-value=1 Score=40.89 Aligned_cols=128 Identities=8% Similarity=0.032 Sum_probs=63.7
Q ss_pred CHHHHHhccccCCCCEEEeC-----CCCChhhHHHHHHHHccCCCCceEEEe--ecCHHhHhhHHHHHhh-cCceeecCC
Q 016513 72 DKEDILRWGVPNNIDMIALS-----FVRKGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE-TDSFMVARG 143 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-----fV~sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-~Dgi~igrg 143 (388)
|...+.+...+.|+|+|.+. |...... ..++++.... +++++.. |.+++ .+++.++. +|++.+++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTA 106 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECch
Confidence 55555467778999999873 4444444 3344333322 3566654 66654 36666665 899999876
Q ss_pred cccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHH-H-hhcCC---CCChHHHHHHHHHHHcCCceeEeccccCCCC
Q 016513 144 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLE-S-MIKSP---RPTRAEATDVANAVLDGTDCVMLSGESAAGA 217 (388)
Q Consensus 144 DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~le-s-M~~~~---~ptraEv~dv~~av~~g~d~i~Ls~eta~G~ 217 (388)
.|.- |. .+.+..+..|..++++-.... . .++.- .++..| .+..+...|+|.+.+++-+..|.
T Consensus 107 ~l~~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~~ 173 (244)
T 1vzw_A 107 ALET-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDGT 173 (244)
T ss_dssp HHHC-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC-----
T ss_pred HhhC-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCcccc
Confidence 5522 11 222333344433333211100 0 00000 012222 23456668999999876555454
No 92
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.40 E-value=1.8 Score=39.66 Aligned_cols=130 Identities=14% Similarity=0.075 Sum_probs=73.9
Q ss_pred CHHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC-
Q 016513 72 DKEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM- 147 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~- 147 (388)
+.+++ ..+.+.|+|.|++-- ..+++.+.++.+.+++. ...+++.+-|.+-.. ...+. +|.|.+.-.++..
T Consensus 90 ~~~~i-~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~---~a~~~Gad~Ig~~~~g~t~~ 163 (229)
T 3q58_A 90 YLQDV-DALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNEGI---SCHQKGIEFIGTTLSGYTGP 163 (229)
T ss_dssp SHHHH-HHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHHHH---HHHHTTCSEEECTTTTSSSS
T ss_pred cHHHH-HHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHHHH---HHHhCCCCEEEecCccCCCC
Confidence 45566 677889999987643 34667788887777664 467777665543332 22222 6877543111211
Q ss_pred -CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 148 -EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 148 -e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
......+ ...+++ ++.+.|++... ..-|. .|+..+...|+|++++. |++.+ |....+.+
T Consensus 164 ~~~~~~~~-~li~~l----~~~~ipvIA~G---------GI~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f 223 (229)
T 3q58_A 164 ITPVEPDL-AMVTQL----SHAGCRVIAEG---------RYNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWF 223 (229)
T ss_dssp CCCSSCCH-HHHHHH----HTTTCCEEEES---------SCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHH
T ss_pred CcCCCCCH-HHHHHH----HHcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHH
Confidence 1111122 112222 22389998643 33333 46677788899999996 55554 65555544
Q ss_pred H
Q 016513 227 R 227 (388)
Q Consensus 227 ~ 227 (388)
.
T Consensus 224 ~ 224 (229)
T 3q58_A 224 S 224 (229)
T ss_dssp H
T ss_pred H
Confidence 3
No 93
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=85.06 E-value=26 Score=33.01 Aligned_cols=205 Identities=16% Similarity=0.148 Sum_probs=119.2
Q ss_pred CCCccccCCccccCCCCChhCHHHHHhccccCCCCEEEeC-CCCChhhHHHHHHHHccCCCCceEEEeecC-HHhHhhHH
Q 016513 52 ERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAKNIQLMSKVEN-QEGVVNFD 129 (388)
Q Consensus 52 ~~k~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakIEt-~~av~nld 129 (388)
.|-|..-++.. ++..|+..|++...+.|++.|=+- +..++.|.+.++.+... .+++.+.+..-+ ..+++..-
T Consensus 13 lRDG~Q~~~~~-----~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di~~a~ 86 (293)
T 3ewb_X 13 LRDGEQTPGVN-----FDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAE 86 (293)
T ss_dssp TTCCC-----C-----CCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHH
T ss_pred CCCcCcCCCCC-----CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHHHHHH
Confidence 34444444432 466777777566667899998664 34466677777665543 356667666643 33443322
Q ss_pred HHHh-h-cC--ceeecCCccc----CCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HH
Q 016513 130 DILR-E-TD--SFMVARGDLG----MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AV 200 (388)
Q Consensus 130 eI~~-~-~D--gi~igrgDLg----~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av 200 (388)
+-+. . .| .++++-.|+- .....++.....+.+++.|+++|..+.+... ..++-+...+.+++. +.
T Consensus 87 ~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~ 160 (293)
T 3ewb_X 87 EALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAI 160 (293)
T ss_dssp HHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHH
T ss_pred HHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHH
Confidence 2111 1 23 3555555543 2445677888888999999999999876432 122333444556666 55
Q ss_pred HcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcc----cchHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEE
Q 016513 201 LDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESS----LDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLI 276 (388)
Q Consensus 201 ~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~----~~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aI 276 (388)
..|+|.|.| .+|.=.-.|.+.-+.++.+.++.-.. +.. ..+. ..-++.+-..+|-+.+++ .
T Consensus 161 ~~G~~~i~l-~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~-------H~Hn------d~Gla~AN~laA~~aGa~-~ 225 (293)
T 3ewb_X 161 DAGATVINI-PDTVGYTNPTEFGQLFQDLRREIKQFDDIIFAS-------HCHD------DLGMATANALAAIENGAR-R 225 (293)
T ss_dssp HTTCCEEEE-ECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEE-------ECBC------TTSCHHHHHHHHHHTTCC-E
T ss_pred HcCCCEEEe-cCCCCCCCHHHHHHHHHHHHHhcCCccCceEEE-------EeCC------CcChHHHHHHHHHHhCCC-E
Confidence 689999999 48877788988888777776543210 100 0010 122466666777788888 4
Q ss_pred EEEcCCc
Q 016513 277 VVLTRGG 283 (388)
Q Consensus 277 vv~T~sG 283 (388)
|=-|-.|
T Consensus 226 vd~sv~G 232 (293)
T 3ewb_X 226 VEGTING 232 (293)
T ss_dssp EEEBGGG
T ss_pred EEeeccc
Confidence 4445433
No 94
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=85.05 E-value=5.8 Score=40.08 Aligned_cols=117 Identities=16% Similarity=0.238 Sum_probs=69.3
Q ss_pred HHHHHhccccCCCCEEEeCCCC-----ChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 73 KEDILRWGVPNNIDMIALSFVR-----KGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~-----sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
.+.+ .++++.|+|.|.+.+.. ..+.++.+++.. .+..+++ -+-|.+....+ .+. +|+|.++-+-=
T Consensus 239 ~~~a-~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~----p~~pvi~g~~~t~e~a~~l---~~~G~d~I~v~~~~G 310 (494)
T 1vrd_A 239 MERV-EKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADY----PDLPVVAGNVATPEGTEAL---IKAGADAVKVGVGPG 310 (494)
T ss_dssp HHHH-HHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC----TTSCEEEEEECSHHHHHHH---HHTTCSEEEECSSCS
T ss_pred HHHH-HHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHC----CCceEEeCCcCCHHHHHHH---HHcCCCEEEEcCCCC
Confidence 4556 88899999999986543 223344444433 1345554 35555444333 333 79999953310
Q ss_pred cCC-------CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 146 GME-------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 146 g~e-------~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
+.. .+.+. ..+...+.+.++..+.|+|.+..+- ...|++.++..|+|++++.
T Consensus 311 ~~~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~GGI~------------~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 311 SICTTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIADGGIR------------YSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp TTCHHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEESCCC------------SHHHHHHHHHTTCSEEEES
T ss_pred ccccccccCCCCccH-HHHHHHHHHHHhhcCCCEEEECCcC------------CHHHHHHHHHcCCCEEEEC
Confidence 100 11111 2344455566666799999765433 3468899999999999975
No 95
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.84 E-value=2.5 Score=39.73 Aligned_cols=115 Identities=10% Similarity=0.078 Sum_probs=70.7
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeec---CCcccCCCChhhH
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA---RGDLGMEIPVEKI 154 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~ig---rgDLg~e~~~~~v 154 (388)
+.+.+.|+|++++|-.- .++..++++.+++.|-+...+.-=.| ..+.+..|++.++|.+-- .|=-|..- .+
T Consensus 117 ~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~liaP~t--~~eri~~i~~~~~gfvY~vS~~GvTG~~~---~~ 190 (267)
T 3vnd_A 117 TKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIAPPNA--DADTLKMVSEQGEGYTYLLSRAGVTGTES---KA 190 (267)
T ss_dssp HHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEECTTC--CHHHHHHHHHHCCSCEEESCCCCCC---------
T ss_pred HHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEECCCC--CHHHHHHHHHhCCCcEEEEecCCCCCCcc---CC
Confidence 77788999999998644 47788899999887755322221222 357899999998866433 12222221 12
Q ss_pred HHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 155 FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 155 ~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
+.-....++..+++ ..|+++... .-|. .++..++..|+|+++..
T Consensus 191 ~~~~~~~v~~vr~~~~~pv~vGfG---------I~~~---e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 191 GEPIENILTQLAEFNAPPPLLGFG---------IAEP---EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp --CHHHHHHHHHTTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 22334555555554 689887543 2222 34466889999999986
No 96
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=84.75 E-value=5.6 Score=35.83 Aligned_cols=130 Identities=12% Similarity=0.106 Sum_probs=74.7
Q ss_pred HHHHhccccCCCCEEEeC-----CCCC----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCC
Q 016513 74 EDILRWGVPNNIDMIALS-----FVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARG 143 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~s-----fV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrg 143 (388)
+++ +.+.+.|+|++-+= |+.+ .+.++++++.+ +....+--++.+++ +.++..+++ +|++.+--+
T Consensus 23 ~~i-~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 23 AEA-DRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHH-HHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHH-HHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 455 77788999987665 7766 66777776554 11233446777663 347777776 799977422
Q ss_pred cccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc---CCceeEeccc--cCC-CC
Q 016513 144 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCVMLSGE--SAA-GA 217 (388)
Q Consensus 144 DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~---g~d~i~Ls~e--ta~-G~ 217 (388)
.. +. ...+.++.++++|+.++++. +|. |..|. ...+.. ++|.+++.+= +.. -+
T Consensus 97 ~~--~~-------~~~~~~~~i~~~g~~igv~~--------~p~-t~~e~---~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 97 VS--RD-------NWQELIQSIKAKGMRPGVSL--------RPG-TPVEE---VFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp GC--TT-------THHHHHHHHHHTTCEEEEEE--------CTT-SCGGG---GHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred Cc--cc-------HHHHHHHHHHHcCCCEEEEE--------eCC-CCHHH---HHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 11 11 11356677788999998753 221 11111 334556 9999988322 111 24
Q ss_pred CHHHHHHHHHHHH
Q 016513 218 YPEIAVKIMRRIC 230 (388)
Q Consensus 218 ~P~~~v~~~~~i~ 230 (388)
|+-..++.++++.
T Consensus 156 ~~~~~l~~i~~~~ 168 (228)
T 1h1y_A 156 FMPEMMEKVRALR 168 (228)
T ss_dssp CCGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 5555555554444
No 97
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=84.31 E-value=5.2 Score=38.05 Aligned_cols=149 Identities=15% Similarity=0.142 Sum_probs=85.5
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgD 144 (388)
|..|+.|...+.+.+.+.|+..|.++ +..+..+++.+. +..+.|.+=|==|.|-...+.-+.. -+++--|.-+
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 44566666665577888999999886 668888888884 3457777667544443333322221 1222222222
Q ss_pred cc--CCCCh------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccCC
Q 016513 145 LG--MEIPV------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAA 215 (388)
Q Consensus 145 Lg--~e~~~------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta~ 215 (388)
+- +.++. +.+..-.+.+.++|......+|+-|-. .|..|+..... +...|+|+|=-| |-.
T Consensus 143 IDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVKTS--TGf 211 (288)
T 3oa3_A 143 LDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQ---------LTADEIIAGCVLSSLAGADYVKTS--TGF 211 (288)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEECC--CSS
T ss_pred EEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCC---------CCHHHHHHHHHHHHHcCCCEEEcC--CCC
Confidence 22 22322 234444445555554333445655543 35677665444 677899998766 322
Q ss_pred --CCCHHHHHHHHHHHHH
Q 016513 216 --GAYPEIAVKIMRRICI 231 (388)
Q Consensus 216 --G~~P~~~v~~~~~i~~ 231 (388)
|.--.+.|+.|+++++
T Consensus 212 ~~~GAT~edv~lmr~~v~ 229 (288)
T 3oa3_A 212 NGPGASIENVSLMSAVCD 229 (288)
T ss_dssp SSCCCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 2334678999999885
No 98
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=84.25 E-value=2.9 Score=39.41 Aligned_cols=114 Identities=9% Similarity=0.077 Sum_probs=70.5
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHH-hHhhHHHHHhhcCceeec--C-CcccCCCChhh
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQE-GVVNFDDILRETDSFMVA--R-GDLGMEIPVEK 153 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~-av~nldeI~~~~Dgi~ig--r-gDLg~e~~~~~ 153 (388)
+.+.+.|+|++++|=.-- ++..++++.+.+.|-+. +-.+ ++. ..+.+.+|.+.++|.+-. + |==|..-.
T Consensus 119 ~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~--I~lv-ap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~--- 191 (271)
T 3nav_A 119 QRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQP--IFIA-PPTASDETLRAVAQLGKGYTYLLSRAGVTGAETK--- 191 (271)
T ss_dssp HHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEE--EEEE-CTTCCHHHHHHHHHHCCSCEEECCCC-----------
T ss_pred HHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeE--EEEE-CCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccC---
Confidence 777889999999986543 66888888888877552 2222 332 357899999988766432 2 11122211
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 154 IFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 154 v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
++.-....++..+++ ..|+++... .-|. .++..++..|+|+++..
T Consensus 192 ~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 192 ANMPVHALLERLQQFDAPPALLGFG---------ISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CCHHHHHHHHHHHHTTCCCEEECSS---------CCSH---HHHHHHHHTTCSEEEES
T ss_pred CchhHHHHHHHHHHhcCCCEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 122234555555654 689987543 2222 34566899999999985
No 99
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=83.98 E-value=13 Score=34.00 Aligned_cols=134 Identities=13% Similarity=0.080 Sum_probs=77.2
Q ss_pred HHHHHhccccCCCCEE--Ee-CCCCCh----hhHHHHHHHHccCCCCceEEEee----------cCHHhHhhHHHHHhh-
Q 016513 73 KEDILRWGVPNNIDMI--AL-SFVRKG----SDLVNVRKVLGPHAKNIQLMSKV----------ENQEGVVNFDDILRE- 134 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v--~~-sfV~sa----~dv~~v~~~l~~~~~~~~IiakI----------Et~~av~nldeI~~~- 134 (388)
...+ +.+++.|+|.| .+ ....+. ++++++++.+.+.| +.++..+ -+. +++++.+..
T Consensus 102 ~~~v-~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~~G~~l~~~~~~---~~~~~~a~~a 175 (273)
T 2qjg_A 102 VTTV-EEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYPRGKHIQNERDP---ELVAHAARLG 175 (273)
T ss_dssp CSCH-HHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEECSTTCSCTTCH---HHHHHHHHHH
T ss_pred HHHH-HHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCCCCcccCCCCCH---hHHHHHHHHH
Confidence 3455 77889999999 33 222222 24566666665544 3445444 122 334443222
Q ss_pred ----cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCC-ChHHHHH-HHHHHHcCCceeE
Q 016513 135 ----TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRP-TRAEATD-VANAVLDGTDCVM 208 (388)
Q Consensus 135 ----~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~p-traEv~d-v~~av~~g~d~i~ 208 (388)
+|.|.++.+ .+++.+ +++ +...+.|++....+ .+ +..+... +..++..|+|+++
T Consensus 176 ~~~Gad~i~~~~~-----~~~~~l----~~i---~~~~~ipvva~GGi--------~~~~~~~~~~~~~~~~~~Ga~gv~ 235 (273)
T 2qjg_A 176 AELGADIVKTSYT-----GDIDSF----RDV---VKGCPAPVVVAGGP--------KTNTDEEFLQMIKDAMEAGAAGVA 235 (273)
T ss_dssp HHTTCSEEEECCC-----SSHHHH----HHH---HHHCSSCEEEECCS--------CCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHcCCCEEEECCC-----CCHHHH----HHH---HHhCCCCEEEEeCC--------CCCCHHHHHHHHHHHHHcCCcEEE
Confidence 687777741 233322 222 33457898864321 22 2333322 6677789999999
Q ss_pred eccccCCCCCHHHHHHHHHHHHHH
Q 016513 209 LSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 209 Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
....--....|.++++.+.+++.+
T Consensus 236 vg~~i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 236 VGRNIFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp CCHHHHTSSSHHHHHHHHHHHHHH
T ss_pred eeHHhhCCCCHHHHHHHHHHHHhc
Confidence 977766667899888888777653
No 100
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=83.91 E-value=8.2 Score=35.92 Aligned_cols=114 Identities=9% Similarity=0.066 Sum_probs=74.5
Q ss_pred HhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHH-hHhhHHHHHhhcCcee--ecC-CcccCCCChh
Q 016513 77 LRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQE-GVVNFDDILRETDSFM--VAR-GDLGMEIPVE 152 (388)
Q Consensus 77 ~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~-av~nldeI~~~~Dgi~--igr-gDLg~e~~~~ 152 (388)
.+.+.+.|+|++++|-. -.|+..++++.+.+.|-+. |..+ ++. ..+.+.+|.+.++|.+ +.+ |==|.. .
T Consensus 109 ~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~--I~lv-aP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~---~ 181 (252)
T 3tha_A 109 VKKAKSLGICALIVPEL-SFEESDDLIKECERYNIAL--ITLV-SVTTPKERVKKLVKHAKGFIYLLASIGITGTK---S 181 (252)
T ss_dssp HHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEE--CEEE-ETTSCHHHHHHHHTTCCSCEEEECCSCSSSCS---H
T ss_pred HHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeE--EEEe-CCCCcHHHHHHHHHhCCCeEEEEecCCCCCcc---c
Confidence 36778899999999987 4577888999998877543 2222 222 3688999999988773 332 111221 2
Q ss_pred hHHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 153 KIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 153 ~v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
.+..-.+..++..+++ ++|+++... .-|...+. .+..++|+++..
T Consensus 182 ~~~~~~~~~v~~vr~~~~~Pv~vGfG---------Ist~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFTNLPIFVGFG---------IQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEESS---------CCSHHHHH----HHTTTSSEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEcC---------cCCHHHHH----HHHhcCCEEEEC
Confidence 3444456777777765 779987543 44444333 345689999985
No 101
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=83.85 E-value=5.5 Score=37.48 Aligned_cols=129 Identities=10% Similarity=0.007 Sum_probs=71.4
Q ss_pred ChhCHHHHHhccccCCCC-EEEeCCC-----------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh--
Q 016513 69 TEKDKEDILRWGVPNNID-MIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-- 134 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d-~v~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 134 (388)
+..|....++.+.+.|+| +|-+.+- .+.+.+.++.+.+.+. .+.+++.|+=.--..+++.++++.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~ 182 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILN 182 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 334444444666788999 8888552 2566666666666543 257899998321122234343432
Q ss_pred ---cCceeecCCc---ccCC-------------C----ChhhHHHHHHHHHHHHHH-c--CCCEEEhhhHHHHhhcCCCC
Q 016513 135 ---TDSFMVARGD---LGME-------------I----PVEKIFLAQKMMIYKCNL-V--GKPVVTATQMLESMIKSPRP 188 (388)
Q Consensus 135 ---~Dgi~igrgD---Lg~e-------------~----~~~~v~~~qk~ii~~c~~-~--gkpvi~atq~lesM~~~~~p 188 (388)
+|+|.+.-.- +..+ . +....+... ..+...++ . ..|++....+-
T Consensus 183 ~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~GGI~--------- 252 (311)
T 1jub_A 183 QFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGTGGIE--------- 252 (311)
T ss_dssp TSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEESSCC---------
T ss_pred HcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEECCCC---------
Confidence 5887664110 0000 0 111223333 34444444 4 68888755432
Q ss_pred ChHHHHHHHHHHHcCCceeEecc
Q 016513 189 TRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 189 traEv~dv~~av~~g~d~i~Ls~ 211 (388)
...|+..++..|+|++++..
T Consensus 253 ---~~~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 253 ---TGQDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp ---SHHHHHHHHHHTCSEEEECH
T ss_pred ---CHHHHHHHHHcCCCEEEEch
Confidence 23567888889999999963
No 102
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=83.83 E-value=3.4 Score=37.51 Aligned_cols=132 Identities=12% Similarity=0.105 Sum_probs=67.9
Q ss_pred CHHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCc--eEEE-------eecCH--------HhHhhHHHHH
Q 016513 72 DKEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNI--QLMS-------KVENQ--------EGVVNFDDIL 132 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~--~Iia-------kIEt~--------~av~nldeI~ 132 (388)
+.+++ +.+++.|+|+|++.. .++++.+.++.+.++. ..+ .+=+ ++++. ..++.+..+.
T Consensus 85 ~~~~~-~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~ 161 (253)
T 1thf_D 85 DFETA-SELILRGADKVSINTAAVENPSLITQIAQTFGS--QAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE 161 (253)
T ss_dssp SHHHH-HHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHH-HHHHHcCCCEEEEChHHHhChHHHHHHHHHcCC--CcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHH
Confidence 45667 777888999998865 2345556655555431 111 1111 12221 1344455555
Q ss_pred hh-cCceeec---CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeE
Q 016513 133 RE-TDSFMVA---RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVM 208 (388)
Q Consensus 133 ~~-~Dgi~ig---rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~ 208 (388)
+. +|.+++- |..-.....++.+ +++ ++..+.|++... ..-+.. |+..+...|+|+++
T Consensus 162 ~~G~~~i~~~~~~~~g~~~g~~~~~~----~~l---~~~~~ipvia~G---------GI~~~~---d~~~~~~~Gadgv~ 222 (253)
T 1thf_D 162 KRGAGEILLTSIDRDGTKSGYDTEMI----RFV---RPLTTLPIIASG---------GAGKME---HFLEAFLAGADAAL 222 (253)
T ss_dssp HTTCSEEEEEETTTTTSCSCCCHHHH----HHH---GGGCCSCEEEES---------CCCSHH---HHHHHHHTTCSEEE
T ss_pred HCCCCEEEEEeccCCCCCCCCCHHHH----HHH---HHhcCCCEEEEC---------CCCCHH---HHHHHHHcCChHHH
Confidence 55 6878774 2211111222222 222 234589988643 233333 45555568999999
Q ss_pred eccccCCCC-CHHHHHHH
Q 016513 209 LSGESAAGA-YPEIAVKI 225 (388)
Q Consensus 209 Ls~eta~G~-~P~~~v~~ 225 (388)
...=--.+. .|.++++.
T Consensus 223 vGsal~~~~~~~~~~~~~ 240 (253)
T 1thf_D 223 AASVFHFREIDVRELKEY 240 (253)
T ss_dssp ESHHHHTTCSCHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHH
Confidence 864333343 45555554
No 103
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=83.81 E-value=5.5 Score=40.55 Aligned_cols=119 Identities=16% Similarity=0.141 Sum_probs=72.6
Q ss_pred HHHHHhccccCCCCEEEeCCC--CCh---hhHHHHHHHHccCCCC-ce-EEEeecCHHhHhhHHHHHhhcCceeecCCcc
Q 016513 73 KEDILRWGVPNNIDMIALSFV--RKG---SDLVNVRKVLGPHAKN-IQ-LMSKVENQEGVVNFDDILRETDSFMVARGDL 145 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV--~sa---~dv~~v~~~l~~~~~~-~~-IiakIEt~~av~nldeI~~~~Dgi~igrgDL 145 (388)
.+.+ +...+.|++.+.+..- .+. +.++.+++.. .+ +. +..-+.|.+..+.+.+. -+|++.+|.|-=
T Consensus 244 ~e~~-~~l~e~gv~~l~Vd~~~g~~~~~~~~i~~lk~~~----~~~~~Vi~G~V~t~~~a~~l~~a--Gad~I~Vg~~~g 316 (503)
T 1me8_A 244 RERV-PALVEAGADVLCIDSSDGFSEWQKITIGWIREKY----GDKVKVGAGNIVDGEGFRYLADA--GADFIKIGIGGG 316 (503)
T ss_dssp HHHH-HHHHHHTCSEEEECCSCCCSHHHHHHHHHHHHHH----GGGSCEEEEEECSHHHHHHHHHH--TCSEEEECSSCS
T ss_pred HHHH-HHHHhhhccceEEecccCcccchhhHHHHHHHhC----CCCceEeeccccCHHHHHHHHHh--CCCeEEecccCC
Confidence 3344 6677889998877322 222 2333333332 22 44 44578888777665443 389988775321
Q ss_pred cC-------CCChhhHHHHHHHHHHHHHHc------CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 146 GM-------EIPVEKIFLAQKMMIYKCNLV------GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 146 g~-------e~~~~~v~~~qk~ii~~c~~~------gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
+. ..+.+ -..+...+.++|++. +.|+|.+..+. --.|++.|+..|||++|+..
T Consensus 317 ~~~~~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~------------~~~di~kAlalGA~~V~iG~ 382 (503)
T 1me8_A 317 SICITREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDGGIV------------YDYHMTLALAMGADFIMLGR 382 (503)
T ss_dssp TTCCSTTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEESCCC------------SHHHHHHHHHTTCSEEEESH
T ss_pred cCcccccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC------------CHHHHHHHHHcCCCEEEECc
Confidence 11 11222 334556677778777 89998755433 34689999999999999963
No 104
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=83.76 E-value=7.3 Score=38.15 Aligned_cols=114 Identities=16% Similarity=0.242 Sum_probs=63.0
Q ss_pred hccccCCCCEEEeC-------CCC---ChhhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 78 RWGVPNNIDMIALS-------FVR---KGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 78 ~~~l~~g~d~v~~s-------fV~---sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+...+.|+|++.+. +.. +.+++..+++.. +++++++ +-|++.. ....+. +|+|.+|+|--
T Consensus 172 ~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-----~~pvi~ggi~t~e~a---~~~~~~Gad~i~vg~Gg~ 243 (393)
T 2qr6_A 172 PIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-----DVPVIAGGVNDYTTA---LHMMRTGAVGIIVGGGEN 243 (393)
T ss_dssp HHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-----SSCEEEECCCSHHHH---HHHHTTTCSEEEESCCSC
T ss_pred HHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-----CCCEEECCcCCHHHH---HHHHHcCCCEEEECCCcc
Confidence 44457899988764 222 345666666553 4667764 4454433 333333 79999987431
Q ss_pred cC----CCChhhHHHHHHHHHHHH----HHcC---CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccc
Q 016513 146 GM----EIPVEKIFLAQKMMIYKC----NLVG---KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 146 g~----e~~~~~v~~~qk~ii~~c----~~~g---kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~e 212 (388)
+. ..+.+ .......+.+++ .+.+ .|+|.+..+- .-.|+..++..|+|++++..-
T Consensus 244 ~~~~~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~------------~~~dv~kalalGA~~V~iG~~ 308 (393)
T 2qr6_A 244 TNSLALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIADGSIE------------NSGDVVKAIACGADAVVLGSP 308 (393)
T ss_dssp CHHHHTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCC------------SHHHHHHHHHHTCSEEEECGG
T ss_pred cccccCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEECCCC------------CHHHHHHHHHcCCCEEEECHH
Confidence 11 11111 112222233332 2245 8888755432 246899999999999999643
No 105
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.07 E-value=4.6 Score=36.57 Aligned_cols=132 Identities=15% Similarity=0.162 Sum_probs=68.4
Q ss_pred HHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCceEE--E-------eecCH--------HhHhhHHHHHh
Q 016513 73 KEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQLM--S-------KVENQ--------EGVVNFDDILR 133 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~~Ii--a-------kIEt~--------~av~nldeI~~ 133 (388)
.+++ +.+++.|+|+|+++- .++++.+.++.+..+. ..+.+- + ++++. ...+.+.++.+
T Consensus 87 ~~~~-~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 87 LEDA-RKLLLSGADKVSVNSAAVRRPELIRELADHFGA--QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHH-HHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHH-HHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC--CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 4566 667777888888764 4555556666655531 111111 1 12221 12444555555
Q ss_pred h-cCceeecC-C-cccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 134 E-TDSFMVAR-G-DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 134 ~-~Dgi~igr-g-DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
. ++++++.. + | +...+. ++. ..++ .++..+.|++... ..-+.. |+......|+|+++..
T Consensus 164 ~G~~~i~~~~~~~~-g~~~g~-~~~-~i~~---l~~~~~ipvia~G---------GI~~~~---d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 164 LGAGEILLTSMDRD-GTKEGY-DLR-LTRM---VAEAVGVPVIASG---------GAGRME---HFLEAFQAGAEAALAA 225 (252)
T ss_dssp HTCCEEEEEETTTT-TTCSCC-CHH-HHHH---HHHHCSSCEEEES---------CCCSHH---HHHHHHHTTCSEEEES
T ss_pred cCCCEEEEecccCC-CCcCCC-CHH-HHHH---HHHHcCCCEEEeC---------CCCCHH---HHHHHHHCCCHHHHHH
Confidence 5 78888741 1 1 122222 111 1122 2344589998643 333343 5555556799999997
Q ss_pred cccCCCC-CHHHHHHH
Q 016513 211 GESAAGA-YPEIAVKI 225 (388)
Q Consensus 211 ~eta~G~-~P~~~v~~ 225 (388)
.---.+. .|.++.+.
T Consensus 226 sal~~~~~~~~~~~~~ 241 (252)
T 1ka9_F 226 SVFHFGEIPIPKLKRY 241 (252)
T ss_dssp HHHHTTSSCHHHHHHH
T ss_pred HHHHcCCCCHHHHHHH
Confidence 5544455 44444444
No 106
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=83.05 E-value=7.7 Score=36.29 Aligned_cols=148 Identities=18% Similarity=0.180 Sum_probs=89.4
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgD 144 (388)
|..|+.|...+.+.+.+.|+..|+++ +.-+..+++.+. +..+.+.+=|=-|.|-...+.-+.. .+++--|..+
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 45577777666578888999999884 677888888884 4457777777666665544444322 2333334333
Q ss_pred ccCCCCh--------hhHHHHHHHHHHHHHHcCCC--EEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEecccc
Q 016513 145 LGMEIPV--------EKIFLAQKMMIYKCNLVGKP--VVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGES 213 (388)
Q Consensus 145 Lg~e~~~--------~~v~~~qk~ii~~c~~~gkp--vi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~et 213 (388)
+-+-+++ +.+..-.+.+.++|. |+| +|+-|-. -|..|+..... +...|+|+|=-|.==
T Consensus 128 IDmViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~---------Lt~eei~~A~~ia~eaGADfVKTSTGf 196 (260)
T 3r12_A 128 IDMVINVGMLKAKEWEYVYEDIRSVVESVK--GKVVKVIIETCY---------LDTEEKIAACVISKLAGAHFVKTSTGF 196 (260)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCGGG---------CCHHHHHHHHHHHHHTTCSEEECCCSS
T ss_pred EEEEeehhhhccccHHHHHHHHHHHHHhcC--CCcEEEEEeCCC---------CCHHHHHHHHHHHHHhCcCEEEcCCCC
Confidence 3333333 233344445555554 444 4554443 36677766655 667899998766211
Q ss_pred CCCCCHHHHHHHHHHHH
Q 016513 214 AAGAYPEIAVKIMRRIC 230 (388)
Q Consensus 214 a~G~~P~~~v~~~~~i~ 230 (388)
..|.--++.|+.|++.+
T Consensus 197 ~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 197 GTGGATAEDVHLMKWIV 213 (260)
T ss_dssp SSCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHh
Confidence 12233567888888875
No 107
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=82.34 E-value=11 Score=32.79 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=68.3
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecC---Ccc---cCCCCh
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVAR---GDL---GMEIPV 151 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igr---gDL---g~e~~~ 151 (388)
+.+.+.|+|+|.++.-.- +...++++. ....+..-+.|++-+... ...-+|.+++++ +.- +...++
T Consensus 80 ~~a~~~gad~v~l~~~~~--~~~~~~~~~----~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~~ 151 (215)
T 1xi3_A 80 DVALAVDADGVQLGPEDM--PIEVAKEIA----PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVIGL 151 (215)
T ss_dssp HHHHHHTCSEEEECTTSC--CHHHHHHHC----TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCCHH
T ss_pred HHHHHcCCCEEEECCccC--CHHHHHHhC----CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCcCH
Confidence 445677999999875321 234444442 233444456666543321 112379888753 110 122233
Q ss_pred hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHH
Q 016513 152 EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 231 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~ 231 (388)
+.+.. + ++...+|++.+..+ .|. ++..+...|+|++.+++---..+.|.+.++.+.+.++
T Consensus 152 ~~l~~----l---~~~~~~pvia~GGI--------~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 152 EGLRK----I---VESVKIPVVAIGGI--------NKD-----NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVE 211 (215)
T ss_dssp HHHHH----H---HHHCSSCEEEESSC--------CTT-----THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHH----H---HHhCCCCEEEECCc--------CHH-----HHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHh
Confidence 33322 2 22347898875431 122 4466677899999997644444567777777665554
No 108
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=81.79 E-value=10 Score=34.17 Aligned_cols=143 Identities=13% Similarity=0.148 Sum_probs=77.4
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh-------h-cCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR-------E-TDS 137 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-------~-~Dg 137 (388)
|..|..+.+.+.+.+.+.|++.+.++ ++-+...++.+. .+.+.+-++-|.|......... . +|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 55688887777677778999998743 456777677664 4678888887777654443221 1 344
Q ss_pred eeecCCcccCCCCh---hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEecccc
Q 016513 138 FMVARGDLGMEIPV---EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGES 213 (388)
Q Consensus 138 i~igrgDLg~e~~~---~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~et 213 (388)
|= +-+.++. .+..... +.+++.+++..|+++-- ++| .+.-|..|+.+++. +...|+|++-.|.--
T Consensus 87 Id-----~viN~g~~~~~~~~~~~-~~i~~v~~a~~pv~vKv-i~e----~~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 87 LD-----IVWNLSAFKSEKYDFVV-EELKEIFRETPSAVHKV-IVE----TPYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp EE-----EECCHHHHHTTCHHHHH-HHHHHHHHTCTTSEEEE-ECC----GGGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EE-----EEecHHHHhcCChHHHH-HHHHHHHHHhcCceEEE-EEe----CCCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 43 1111111 0112222 33555555544765421 122 23446667766666 456699999433211
Q ss_pred CCCCCHHHHHHHHH
Q 016513 214 AAGAYPEIAVKIMR 227 (388)
Q Consensus 214 a~G~~P~~~v~~~~ 227 (388)
..|.+-.+.++.|.
T Consensus 156 ~~gga~~~~i~~v~ 169 (225)
T 1mzh_A 156 APRGTTLEEVRLIK 169 (225)
T ss_dssp SSSCCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHH
Confidence 12333445555544
No 109
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=81.69 E-value=3 Score=38.18 Aligned_cols=134 Identities=10% Similarity=0.062 Sum_probs=81.1
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHH---HHccCCCCceEEEeecCHHhHhhHHHHHh--hcCceeec---CCcccCCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRK---VLGPHAKNIQLMSKVENQEGVVNFDDILR--ETDSFMVA---RGDLGMEI 149 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~---~l~~~~~~~~IiakIEt~~av~nldeI~~--~~Dgi~ig---rgDLg~e~ 149 (388)
....+ +|++.+..-.+.+++.++.+ .+++.|..+.+-..-.|+ ++.+++++. ..|.+++. ||==|...
T Consensus 81 ~~~~~--Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f 156 (227)
T 1tqx_A 81 PLLKT--SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFGGQSF 156 (227)
T ss_dssp GGCTT--SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCSSCCC
T ss_pred HHHHh--CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCCCccc
Confidence 44444 89887766554446777777 888888776665555565 788999999 78988665 34334444
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHH
Q 016513 150 PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 229 (388)
Q Consensus 150 ~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i 229 (388)
....+..++ ++-+... +.++.+...+ +. ..+..+...|+|.++..+--.-...|.++++.+++.
T Consensus 157 ~~~~l~ki~-~lr~~~~--~~~I~VdGGI----------~~---~ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~ 220 (227)
T 1tqx_A 157 MHDMMGKVS-FLRKKYK--NLNIQVDGGL----------NI---ETTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVS 220 (227)
T ss_dssp CGGGHHHHH-HHHHHCT--TCEEEEESSC----------CH---HHHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHH
T ss_pred chHHHHHHH-HHHHhcc--CCeEEEECCC----------CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHH
Confidence 333232222 1111111 5555443221 11 244667788999999975433344799999988765
Q ss_pred HH
Q 016513 230 CI 231 (388)
Q Consensus 230 ~~ 231 (388)
+.
T Consensus 221 ~~ 222 (227)
T 1tqx_A 221 VQ 222 (227)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 110
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=81.50 E-value=9.7 Score=35.17 Aligned_cols=150 Identities=13% Similarity=0.119 Sum_probs=88.2
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgD 144 (388)
|..|+.|.+.+.+.+.+.|+..|.++ +.-+..+++.+. +..+.+.+=|==|.|-...+.-+.. -+++--|.-+
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 45677777766578888999999885 567888888884 4457777667554444333333221 1222223332
Q ss_pred ccCCCCh--------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccCC
Q 016513 145 LGMEIPV--------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAA 215 (388)
Q Consensus 145 Lg~e~~~--------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta~ 215 (388)
+-+-+++ +.+..-.+.+.++|...-.++|+-|-.| |..|+..... +...|+|+|=-|.==..
T Consensus 112 IDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------t~eei~~a~~ia~~aGADfVKTSTGf~~ 182 (239)
T 3ngj_A 112 VDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYL---------TNEEKVEVCKRCVAAGAEYVKTSTGFGT 182 (239)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---------CHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred EEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCC---------CHHHHHHHHHHHHHHCcCEEECCCCCCC
Confidence 2223332 3444445566666653334567665543 5667765555 46779999876622112
Q ss_pred CCCHHHHHHHHHHHH
Q 016513 216 GAYPEIAVKIMRRIC 230 (388)
Q Consensus 216 G~~P~~~v~~~~~i~ 230 (388)
|.--++.|+.|++.+
T Consensus 183 ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 183 HGATPEDVKLMKDTV 197 (239)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhh
Confidence 233468899988876
No 111
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=81.21 E-value=9.5 Score=37.66 Aligned_cols=109 Identities=12% Similarity=0.119 Sum_probs=78.2
Q ss_pred hccccCCCCEEEeCCC-----------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCccc
Q 016513 78 RWGVPNNIDMIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg 146 (388)
+.+.+.|+|+|...-- -..+..+.++++..+. .+.+++-+-.+..++-+. +.+|.+-||.+++.
T Consensus 163 ~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l~---~~vd~lkIgs~~~~ 237 (385)
T 3nvt_A 163 ESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVAL---DYVDVIQIGARNMQ 237 (385)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHHT---TTCSEEEECGGGTT
T ss_pred HHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHHH---hhCCEEEECccccc
Confidence 5667899998865421 1257788888887665 478888887777766554 45899999988764
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc-CCceeEec
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLS 210 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~-g~d~i~Ls 210 (388)
.. .+++++.+.||||++.|.|. .|..|+...+..+.. |.+=++|.
T Consensus 238 n~-----------~LL~~~a~~gkPVilk~G~~--------~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 238 NF-----------ELLKAAGRVDKPILLKRGLS--------ATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp CH-----------HHHHHHHTSSSCEEEECCTT--------CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CH-----------HHHHHHHccCCcEEEecCCC--------CCHHHHHHHHHHHHHcCCCeEEEE
Confidence 31 45666778999999966542 778899888888865 76556664
No 112
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=80.07 E-value=10 Score=35.98 Aligned_cols=95 Identities=15% Similarity=0.017 Sum_probs=61.1
Q ss_pred hccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCC-cc
Q 016513 78 RWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARG-DL 145 (388)
Q Consensus 78 ~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrg-DL 145 (388)
++.++.|+|+|++. +.-|.++=+++.+. ....+.++.+|+-+ -|.++++......+. +|++++-+- ..
T Consensus 42 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 42 HKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 78889999999853 33445555555444 44556788999987 455666666555555 799998643 33
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
......+.+...-+.|. .+.+.|+++.
T Consensus 122 ~~~~s~~~l~~~f~~ia---~a~~lPiilY 148 (307)
T 3s5o_A 122 RGRMSSAALIHHYTKVA---DLSPIPVVLY 148 (307)
T ss_dssp GGGCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHH---hhcCCCEEEE
Confidence 22344556666666664 4568998864
No 113
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=80.01 E-value=8.9 Score=34.32 Aligned_cols=133 Identities=13% Similarity=0.135 Sum_probs=69.4
Q ss_pred CHHHHHhccccCCCCEEEeCCCCC--h--hhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCce---eecC--
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRK--G--SDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSF---MVAR-- 142 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~s--a--~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi---~igr-- 142 (388)
+.+.+ +.+++.|+|+|.+..... + +.+.++.+.+.+...+..++..+.|.+-.... ...-+|.| +.|.
T Consensus 90 ~~~~i-~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a--~~~Gad~i~~~v~g~~~ 166 (234)
T 1yxy_A 90 TMTEV-DQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVA--HQAGIDFVGTTLSGYTP 166 (234)
T ss_dssp SHHHH-HHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHH--HHTTCSEEECTTTTSST
T ss_pred hHHHH-HHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHH--HHcCCCEEeeeccccCC
Confidence 45677 888999999998755422 1 12233333333322345677777776442221 11226877 3332
Q ss_pred CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHH
Q 016513 143 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIA 222 (388)
Q Consensus 143 gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~ 222 (388)
+..+. .+ ..+..+ +++ +.. +.|++.... .-|.. |+..+...|+|++++.. ++-+ |.++
T Consensus 167 ~~~~~-~~-~~~~~i-~~~---~~~-~ipvia~GG---------I~s~~---~~~~~~~~Gad~v~vGs--al~~-p~~~ 224 (234)
T 1yxy_A 167 YSRQE-AG-PDVALI-EAL---CKA-GIAVIAEGK---------IHSPE---EAKKINDLGVAGIVVGG--AITR-PKEI 224 (234)
T ss_dssp TSCCS-SS-CCHHHH-HHH---HHT-TCCEEEESC---------CCSHH---HHHHHHTTCCSEEEECH--HHHC-HHHH
T ss_pred CCcCC-CC-CCHHHH-HHH---HhC-CCCEEEECC---------CCCHH---HHHHHHHCCCCEEEEch--HHhC-hHHH
Confidence 22111 11 122211 222 223 789886442 22233 55666777999999974 2222 7666
Q ss_pred HHHHHHH
Q 016513 223 VKIMRRI 229 (388)
Q Consensus 223 v~~~~~i 229 (388)
++.+.+.
T Consensus 225 ~~~l~~~ 231 (234)
T 1yxy_A 225 AERFIEA 231 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
No 114
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=79.89 E-value=16 Score=33.27 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=62.6
Q ss_pred EEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHH--------
Q 016513 87 MIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQ-------- 158 (388)
Q Consensus 87 ~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~q-------- 158 (388)
.|.+=...+++++..+.+.+-+.|-+. |-.-.-|+.+++.+.+|.+..+.++||-| .=+..+.+..+.
T Consensus 15 vi~Vir~~~~~~a~~~a~al~~gGi~~-iEvt~~t~~a~~~I~~l~~~~p~~~IGAG---TVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 15 LIPVIVIDDLVHAIPMAKALVAGGVHL-LEVTLRTEAGLAAISAIKKAVPEAIVGAG---TVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCE-EEEETTSTTHHHHHHHHHHHCTTSEEEEE---CCCSHHHHHHHHHHTCSEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcCCCE-EEEeCCCccHHHHHHHHHHHCCCCeEeec---cccCHHHHHHHHHcCCCEEE
Confidence 344555566666666666665544332 22233456666666666665555566654 112233333222
Q ss_pred -----HHHHHHHHHcCC------CEE--EhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 159 -----KMMIYKCNLVGK------PVV--TATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 159 -----k~ii~~c~~~gk------pvi--~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
..+++.|+++|. |++ ++| .+++..|...|+|.+=+.
T Consensus 91 sP~~~~evi~~~~~~~v~~~~~~~~~PG~~T----------------ptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 91 SPGLTPELIEKAKQVKLDGQWQGVFLPGVAT----------------ASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp ESSCCHHHHHHHHHHHHHCSCCCEEEEEECS----------------HHHHHHHHHTTCCEEEET
T ss_pred eCCCcHHHHHHHHHcCCCccCCCeEeCCCCC----------------HHHHHHHHHcCCCEEEEC
Confidence 478899999999 864 332 355688999999999774
No 115
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=79.54 E-value=33 Score=31.02 Aligned_cols=105 Identities=8% Similarity=0.037 Sum_probs=66.3
Q ss_pred hhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee-------cC----HHhHhhHHHHHhh----
Q 016513 70 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV-------EN----QEGVVNFDDILRE---- 134 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI-------Et----~~av~nldeI~~~---- 134 (388)
..+..+.++++.++|.|+|=+....-.++++++++.+.+.|-.+..+.-- .. .++++.+...++.
T Consensus 37 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~l 116 (287)
T 3kws_A 37 GESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGEL 116 (287)
T ss_dssp CSSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 34555544888899999999988877889999999998877554333210 01 2345555555554
Q ss_pred -cCceeecCCc--ccCCCC-----hhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 135 -TDSFMVARGD--LGMEIP-----VEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 135 -~Dgi~igrgD--Lg~e~~-----~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
++.+.+.+|. ..-..| ++.+...-+++...|.++|..+.+
T Consensus 117 Ga~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 117 GSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp TCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3556655442 211111 234555666788888888887765
No 116
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=78.97 E-value=6.4 Score=35.24 Aligned_cols=112 Identities=17% Similarity=0.196 Sum_probs=65.0
Q ss_pred HHHHHhccccCCCCEEEe-----CCCCC----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecC
Q 016513 73 KEDILRWGVPNNIDMIAL-----SFVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~-----sfV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igr 142 (388)
.+.+ +.+.+.|+|++-+ +|+.+ .+.++++++.+ +....+..++..++ +.++...++ +|++.+.-
T Consensus 26 ~~~i-~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~ 99 (230)
T 1rpx_A 26 GEQV-KAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHC 99 (230)
T ss_dssp HHHH-HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEEC
T ss_pred HHHH-HHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEe
Confidence 3445 7778899998877 35554 45555555443 33455667787743 456666655 79998762
Q ss_pred CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 143 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 143 gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
.... .+.. ...++.++++|+.++++. +|. |..|. ..++..|+|.+++.
T Consensus 100 ~~~~----~~~~----~~~~~~~~~~g~~ig~~~--------~p~-t~~e~---~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 100 EQSS----TIHL----HRTINQIKSLGAKAGVVL--------NPG-TPLTA---IEYVLDAVDLVLIM 147 (230)
T ss_dssp STTT----CSCH----HHHHHHHHHTTSEEEEEE--------CTT-CCGGG---GTTTTTTCSEEEEE
T ss_pred cCcc----chhH----HHHHHHHHHcCCcEEEEe--------CCC-CCHHH---HHHHHhhCCEEEEE
Confidence 2001 1222 356677788898888753 111 11121 23445789988554
No 117
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=78.88 E-value=6 Score=36.66 Aligned_cols=117 Identities=13% Similarity=0.074 Sum_probs=67.4
Q ss_pred HHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeec--C-CcccCCCC
Q 016513 74 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA--R-GDLGMEIP 150 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~ig--r-gDLg~e~~ 150 (388)
..+ +.+.+.|+|++++|-.. .+++.++.+.+.++|.+ ++..+.-....+.+.+|++.++|.+.. . |=-|..-+
T Consensus 113 ~f~-~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~ 188 (262)
T 2ekc_A 113 KFC-RLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREK 188 (262)
T ss_dssp HHH-HHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC-------
T ss_pred HHH-HHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCC
Confidence 344 66788999999998654 47788888888877644 233333223456888999888765422 1 12222222
Q ss_pred hhhHH-HHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 151 VEKIF-LAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 151 ~~~v~-~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
. . .-....++..+++ +.|+.+... .-|. .++.. +..|+|+++..
T Consensus 189 ~---~~~~~~~~v~~vr~~~~~pv~vG~G---------I~t~---e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 189 L---PYERIKKKVEEYRELCDKPVVVGFG---------VSKK---EHARE-IGSFADGVVVG 234 (262)
T ss_dssp -----CHHHHHHHHHHHHHCCSCEEEESS---------CCSH---HHHHH-HHTTSSEEEEC
T ss_pred c---CcccHHHHHHHHHhhcCCCEEEeCC---------CCCH---HHHHH-HHcCCCEEEEC
Confidence 1 1 1122344444443 789876443 2222 23344 78899999985
No 118
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=78.39 E-value=5.8 Score=37.22 Aligned_cols=109 Identities=17% Similarity=0.231 Sum_probs=71.2
Q ss_pred CHHHHHhccccCCCCEEEeC-----CCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhh---HHHHHhh-cCceeecC
Q 016513 72 DKEDILRWGVPNNIDMIALS-----FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVN---FDDILRE-TDSFMVAR 142 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-----fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~n---ldeI~~~-~Dgi~igr 142 (388)
|...+++...+.|+++|-+- |-.+.++++++++.. +++++.| +.+-+ +++-.+. +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 55666455556899999763 233578888888765 4567655 23322 3333333 79999987
Q ss_pred CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 143 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 143 gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
.+|. . .-.+.++..|++.|..+++.++ |..| +..+...|+|.+-.++
T Consensus 144 a~l~----~----~~l~~l~~~a~~lGl~~lvev~-----------t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AALE----Q----SVLVSMLDRTESLGMTALVEVH-----------TEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp GGSC----H----HHHHHHHHHHHHTTCEEEEEES-----------SHHH---HHHHHHHTCSEEEEES
T ss_pred ccCC----H----HHHHHHHHHHHHCCCcEEEEcC-----------CHHH---HHHHHHCCCCEEEECC
Confidence 7774 2 2245678889999999876431 2333 3456677999998875
No 119
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=78.28 E-value=26 Score=33.65 Aligned_cols=150 Identities=16% Similarity=0.106 Sum_probs=88.4
Q ss_pred CChhCHHHHHhccccCCCCEEEe-----CCCCC-------hhhHHHHHHHHccCCCCceEEEee-cCHHhHhhHHHHHhh
Q 016513 68 LTEKDKEDILRWGVPNNIDMIAL-----SFVRK-------GSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE 134 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~-----sfV~s-------a~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~ 134 (388)
++..++..+++...+.|+|.|=+ ++..| +.+.+.++++.. ..+++.+.+.. =+..-.+.++...+.
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~a 105 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQA 105 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHhC
Confidence 46667777745566789999988 33322 334444555443 34567777662 211112344444444
Q ss_pred -cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccc
Q 016513 135 -TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGE 212 (388)
Q Consensus 135 -~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~e 212 (388)
.|++.|. + +..++ ...+..++.|+++|+.+...- ...+.-+...+.+++. +...|+|.|.|.+=
T Consensus 106 Gvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~~------~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT 171 (345)
T 1nvm_A 106 GARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGFL------MMSHMIPAEKLAEQGKLMESYGATCIYMADS 171 (345)
T ss_dssp TCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEEE------ESTTSSCHHHHHHHHHHHHHHTCSEEEEECT
T ss_pred CcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEEE------EeCCCCCHHHHHHHHHHHHHCCCCEEEECCC
Confidence 6887774 2 22111 124667888999999987641 1123344455666666 45568999999644
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 016513 213 SAAGAYPEIAVKIMRRICIEA 233 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~a 233 (388)
|-. ..|-++-+.++.+.++.
T Consensus 172 ~G~-~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 172 GGA-MSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp TCC-CCHHHHHHHHHHHHHHS
T ss_pred cCc-cCHHHHHHHHHHHHHhc
Confidence 444 45988888777776554
No 120
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=78.19 E-value=16 Score=36.61 Aligned_cols=120 Identities=18% Similarity=0.207 Sum_probs=72.0
Q ss_pred CHHHHHhccccCCCCEEEeCCCC-Chh----hHHHHHHHHccCCCCce-EEEeecCHHhHhhHHHHHhhcCceeecCCc-
Q 016513 72 DKEDILRWGVPNNIDMIALSFVR-KGS----DLVNVRKVLGPHAKNIQ-LMSKVENQEGVVNFDDILRETDSFMVARGD- 144 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~-sa~----dv~~v~~~l~~~~~~~~-IiakIEt~~av~nldeI~~~~Dgi~igrgD- 144 (388)
..+.+ +++++.|+|.|++.... ..+ .++++++.+ ..+. +.-.+-+.+....+.+ .-+|+|.+|-|-
T Consensus 234 ~~~~a-~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~----p~~pvi~G~v~t~~~a~~~~~--~Gad~I~vg~g~g 306 (491)
T 1zfj_A 234 TFERA-EALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHF----PNRTLIAGNIATAEGARALYD--AGVDVVKVGIGPG 306 (491)
T ss_dssp HHHHH-HHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHC----SSSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCC
T ss_pred HHHHH-HHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHC----CCCcEeCCCccCHHHHHHHHH--cCCCEEEECccCC
Confidence 45666 88899999999987632 122 233333332 1333 3445666655443322 238999887431
Q ss_pred -ccC-----CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 145 -LGM-----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 145 -Lg~-----e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
... ..+.+ ...+.+.+..+++..+.|+|....+- -..|++.++..|+|++++..
T Consensus 307 ~~~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~GGi~------------~~~di~kal~~GA~~v~vG~ 366 (491)
T 1zfj_A 307 SICTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIADGGIK------------YSGDIVKALAAGGNAVMLGS 366 (491)
T ss_dssp TTBCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEESCCC------------SHHHHHHHHHTTCSEEEEST
T ss_pred cceEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEeeCCCC------------CHHHHHHHHHcCCcceeeCH
Confidence 000 11111 34445677778888899998754332 34688999999999999953
No 121
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=78.14 E-value=16 Score=36.76 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=69.9
Q ss_pred HHHHHhccccCCCCEEEeCCC--CChhhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhhcCceeecCCcccCC-
Q 016513 73 KEDILRWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRETDSFMVARGDLGME- 148 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV--~sa~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~~Dgi~igrgDLg~e- 148 (388)
.+.+ .+.++.|+|.+.+.-. .+..-+..++.+-... ++++++ .+-++++...+. -+|++.+|.|-=+..
T Consensus 230 ~~~a-~~l~~~gvd~lvvdta~G~~~~~L~~I~~l~~~~--~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~ 302 (486)
T 2cu0_A 230 IKRA-IELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKV--DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICT 302 (486)
T ss_dssp HHHH-HHHHHTTCSEEEEECSCCCCHHHHHHHHHHHHTC--CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBC
T ss_pred HHHH-HHHHHhcCCceEEEecCCcEeehhhHHHHHHHHh--CCccccCCcCCHHHHHHhh----CCCeEEEeeeecccee
Confidence 4555 7778899998766522 2223333333322221 456666 466777665554 689888864431111
Q ss_pred ------CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccc
Q 016513 149 ------IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 149 ------~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~e 212 (388)
.+.+. ......+.+.+.+.+.|+|.+..+. --.|++.|+..|||++|+..=
T Consensus 303 ~r~~~~~g~~~-~~~l~~~~~~~~~~~vpVia~GGi~------------~~~di~kalalGA~~v~~g~~ 359 (486)
T 2cu0_A 303 TRIVAGVGVPQ-ITAVAMVADRAQEYGLYVIADGGIR------------YSGDIVKAIAAGADAVMLGNL 359 (486)
T ss_dssp HHHHTCCCCCH-HHHHHHHHHHHHHHTCEEEEESCCC------------SHHHHHHHHHTTCSEEEESTT
T ss_pred eeEEeecCcch-HHHHHHHHHHHHHcCCcEEecCCCC------------CHHHHHHHHHcCCCceeeChh
Confidence 11111 2333344445566689998755433 246889999999999999643
No 122
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=77.76 E-value=3.8 Score=37.35 Aligned_cols=128 Identities=13% Similarity=0.149 Sum_probs=70.9
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhH----HHHHhh-----cCceeecCCcccCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNF----DDILRE-----TDSFMVARGDLGME 148 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nl----deI~~~-----~Dgi~igrgDLg~e 148 (388)
+...+.|+|++.+.-.-..+-++.+.+.+.+.|+.+.+++..-++.+.+.+ +.++.. .||++.+.
T Consensus 85 ~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a------ 158 (228)
T 3m47_A 85 RATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS------ 158 (228)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS------
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC------
Confidence 556678999998865555666888888887766666666677666543322 223322 36655432
Q ss_pred CChhhHHHHHHHHHHHHHHcCC-CEEEhhhHHHHhhcCCCCC-hHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 149 IPVEKIFLAQKMMIYKCNLVGK-PVVTATQMLESMIKSPRPT-RAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~~gk-pvi~atq~lesM~~~~~pt-raEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
...+++..+. +. .|. ..++ | |- +++-.+. .++..|+|.++.+.-..-...|.++++.+
T Consensus 159 t~~~e~~~ir----~~---~~~~~~iv-~-----------PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~ 218 (228)
T 3m47_A 159 TRPERLSRLR----EI---IGQDSFLI-S-----------PGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGA 218 (228)
T ss_dssp SCHHHHHHHH----HH---HCSSSEEE-E-----------CC----------CGGGTCSEEEECHHHHTSSCHHHHHHHH
T ss_pred CChHHHHHHH----Hh---cCCCCEEE-e-----------cCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHH
Confidence 1122332221 11 233 1222 1 11 3333456 77889999999876666667898888777
Q ss_pred HHHHH
Q 016513 227 RRICI 231 (388)
Q Consensus 227 ~~i~~ 231 (388)
.+.++
T Consensus 219 ~~~~~ 223 (228)
T 3m47_A 219 IESIK 223 (228)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 66543
No 123
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=77.63 E-value=7.7 Score=36.92 Aligned_cols=96 Identities=11% Similarity=0.126 Sum_probs=61.1
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++- +.-|.++=+++.+. ....+.++.+|+-+ -|.++++....-.+. +||+++-+-..
T Consensus 35 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 35 VDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred HHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 378889999999873 22344444444443 34446678999987 356666666555554 79999986654
Q ss_pred c--CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 G--MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g--~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
. ...+.+.+...-+.|.+ +.+.|+++.
T Consensus 115 ~~~~~~s~~~l~~~f~~va~---a~~lPiilY 143 (309)
T 3fkr_A 115 GATFRVPEAQIFEFYARVSD---AIAIPIMVQ 143 (309)
T ss_dssp TTTBCCCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHH---hcCCCEEEE
Confidence 3 23345666666666644 458888764
No 124
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=77.59 E-value=12 Score=35.22 Aligned_cols=95 Identities=11% Similarity=0.076 Sum_probs=61.5
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. ....+.++.+|+-+ -|.++++......+. +|++|+-+-.+
T Consensus 29 v~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 108 (292)
T 3daq_A 29 VNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYY 108 (292)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 378889999999764 23334444444443 34446678999988 366666666665555 79999886544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|.+++ +.|+++.
T Consensus 109 ~~-~~~~~l~~~f~~ia~a~---~lPiilY 134 (292)
T 3daq_A 109 NK-TNQRGLVKHFEAIADAV---KLPVVLY 134 (292)
T ss_dssp SC-CCHHHHHHHHHHHHHHH---CSCEEEE
T ss_pred CC-CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 32 24456666666665554 8999874
No 125
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=76.80 E-value=8.4 Score=37.60 Aligned_cols=96 Identities=16% Similarity=0.240 Sum_probs=65.2
Q ss_pred hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 96 GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 96 a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.++.+.++++..+. .+.+++-.=..++++-+ .+. +|.+=||.+|+ .. ++ +++++.+.|||+|+
T Consensus 77 ~e~~~~L~~~~~~~--Gi~~~st~fD~~svd~l---~~~~v~~~KI~S~~~-~N-----~p-----LL~~va~~gKPviL 140 (350)
T 3g8r_A 77 PEQMQKLVAEMKAN--GFKAICTPFDEESVDLI---EAHGIEIIKIASCSF-TD-----WP-----LLERIARSDKPVVA 140 (350)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECSHHHHHHH---HHTTCCEEEECSSST-TC-----HH-----HHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEeccCCHHHHHHH---HHcCCCEEEECcccc-cC-----HH-----HHHHHHhhCCcEEE
Confidence 45566666776654 36777755555555444 445 89999998887 22 22 34456678999999
Q ss_pred hhhHHHHhhcCCCCChHHHHHHHHHHHc-CCceeEeccccCCCCCH
Q 016513 175 ATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLSGESAAGAYP 219 (388)
Q Consensus 175 atq~lesM~~~~~ptraEv~dv~~av~~-g~d~i~Ls~eta~G~~P 219 (388)
.|.| -|..|+...++++.. |.+.++|--++ .||
T Consensus 141 stGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s---~YP 174 (350)
T 3g8r_A 141 STAG---------ARREDIDKVVSFMLHRGKDLTIMHCVA---EYP 174 (350)
T ss_dssp ECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCC---CSS
T ss_pred ECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCC---CCC
Confidence 8874 277899999998875 67766665554 366
No 126
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=76.76 E-value=15 Score=33.62 Aligned_cols=43 Identities=7% Similarity=0.047 Sum_probs=31.6
Q ss_pred CHHHHHhccccCCCCEEEeCCCC----------ChhhHHHHHHHHccCCCCce
Q 016513 72 DKEDILRWGVPNNIDMIALSFVR----------KGSDLVNVRKVLGPHAKNIQ 114 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~----------sa~dv~~v~~~l~~~~~~~~ 114 (388)
+..+..+.+.+.|.|+|=+..-. +.++++++++.+.+.|-.+.
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 44444478889999999887654 46778899999988765543
No 127
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=76.62 E-value=12 Score=32.69 Aligned_cols=108 Identities=12% Similarity=0.116 Sum_probs=64.0
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCC-Ch-hhHHHHHHHHccCCCCceEEE-eecCHHhHhhHHHHHhh-cCceeecCCc
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVR-KG-SDLVNVRKVLGPHAKNIQLMS-KVENQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~-sa-~dv~~v~~~l~~~~~~~~Iia-kIEt~~av~nldeI~~~-~Dgi~igrgD 144 (388)
+..+...+.+...+.|+++|-+.+-. .+ +.++++|+... ++..+-+ .+.|++- +++-.+. +|.+ ++++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPHL 92 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCCC
Confidence 33444444356667899999775432 22 23566666553 2333333 3455543 3333333 7988 77662
Q ss_pred ccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 145 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 145 Lg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
+ ..+++.|+++|+|++... .|. +++..+...|+|.+-+.
T Consensus 93 -----~--------~~~~~~~~~~g~~vi~g~-----------~t~---~e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 93 -----D--------EEISQFCKEKGVFYMPGV-----------MTP---TELVKAMKLGHTILKLF 131 (205)
T ss_dssp -----C--------HHHHHHHHHHTCEEECEE-----------CSH---HHHHHHHHTTCCEEEET
T ss_pred -----C--------HHHHHHHHHcCCcEECCc-----------CCH---HHHHHHHHcCCCEEEEc
Confidence 1 357888999999998521 232 34678899999998764
No 128
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=76.37 E-value=15 Score=33.58 Aligned_cols=154 Identities=16% Similarity=0.074 Sum_probs=91.3
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCc
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgD 144 (388)
|..|+.|.+.+.+.+.+.|+..|.++ +..+..++ .+. +..+.+.+=|=-|.|-...+.-+.. .+++--|.-+
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l~--~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GVA--PSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HHC--CTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 55677787776578889999999884 56777777 663 4457777767555555444333321 2233333332
Q ss_pred ccCCCCh--------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccC-
Q 016513 145 LGMEIPV--------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESA- 214 (388)
Q Consensus 145 Lg~e~~~--------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta- 214 (388)
+-+-+++ +.+..-.+.+.++|...-..+|+-|-.|+. ..|..|+..... +...|+|+|=-|.==.
T Consensus 97 IDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVKTSTGf~~ 171 (231)
T 3ndo_A 97 IDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVKTSTGFHP 171 (231)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEECCCSCCT
T ss_pred EEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEEcCCCCCC
Confidence 3223332 234444455666664222346888877732 247788877666 6678999986552111
Q ss_pred CCCCHHHHHHHHHHHHH
Q 016513 215 AGAYPEIAVKIMRRICI 231 (388)
Q Consensus 215 ~G~~P~~~v~~~~~i~~ 231 (388)
.|.--++.|+.|++.+.
T Consensus 172 ~~gAt~edv~lm~~~v~ 188 (231)
T 3ndo_A 172 SGGASVQAVEIMARTVG 188 (231)
T ss_dssp TCSCCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhC
Confidence 22234688888888763
No 129
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=76.16 E-value=65 Score=32.04 Aligned_cols=155 Identities=12% Similarity=0.084 Sum_probs=94.0
Q ss_pred CCChhCHHHHHhccccCCCCEEEeC-CCCChhhHHHHHHHHccCCCCceEEEee-cCHHhHhhHHHHHhh-cC--ceeec
Q 016513 67 TLTEKDKEDILRWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE-TD--SFMVA 141 (388)
Q Consensus 67 ~lt~~D~~di~~~~l~~g~d~v~~s-fV~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~-~D--gi~ig 141 (388)
.++..++..|++...+.|+|.|=+. ..-++.|.+.++.+. +.+.+..+.+.+ .+.++++ .-++. .| .++++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~di~---~A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDDAR---VAVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHHHH---HHHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhhHH---HHHHcCCCEEEEEee
Confidence 3577788888566667899999884 455666666666555 344555555432 3444432 22322 45 44555
Q ss_pred CCcccC----CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccCCC
Q 016513 142 RGDLGM----EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAAG 216 (388)
Q Consensus 142 rgDLg~----e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta~G 216 (388)
-.|+-. ....+++.......++.|+++|..|.+... ...+.+...+.+++. +...|+|.+.| .+|.=.
T Consensus 133 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e------da~r~d~~~~~~v~~~~~~~Ga~~i~l-~DTvG~ 205 (423)
T 3ivs_A 133 TSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLSLYKAVDKIGVNRVGI-ADTVGC 205 (423)
T ss_dssp C-------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHHHHHHHHHHCCSEEEE-EETTSC
T ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc------cCcCCCHHHHHHHHHHHHHhCCCcccc-CCccCc
Confidence 555432 223456667777899999999999876421 111233444555555 45679999999 588878
Q ss_pred CCHHHHHHHHHHHHHH
Q 016513 217 AYPEIAVKIMRRICIE 232 (388)
Q Consensus 217 ~~P~~~v~~~~~i~~~ 232 (388)
-.|.+.-+.++.+...
T Consensus 206 ~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 206 ATPRQVYDLIRTLRGV 221 (423)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8898877777776643
No 130
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=75.91 E-value=18 Score=33.92 Aligned_cols=99 Identities=9% Similarity=0.093 Sum_probs=63.0
Q ss_pred HhccccCCCCEEEe------CCCCChhhHHHHHHHH-ccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIAL------SFVRKGSDLVNVRKVL-GPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~------sfV~sa~dv~~v~~~l-~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++ .+.-|.++=+++.+.. ...+.++.+|+-+= |.++++....-.+. +|++|+-+-.+
T Consensus 30 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 109 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSY 109 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 37888999999986 2445555555555544 44456788999884 46677666666555 79999986555
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.-..+.+.+...-+.|.+++-+-+.|+++.
T Consensus 110 ~~~~s~~~l~~~f~~va~a~p~~~lPiilY 139 (294)
T 3b4u_A 110 FKNVSDDGLFAWFSAVFSKIGKDARDILVY 139 (294)
T ss_dssp SCSCCHHHHHHHHHHHHHHHCTTCCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 331344566655566644331117999873
No 131
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=75.83 E-value=1.5 Score=41.68 Aligned_cols=72 Identities=21% Similarity=0.219 Sum_probs=52.1
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC------
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR------ 142 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr------ 142 (388)
+.+.+ +.+++.|+|+|++.. -++++++++++.+...+.++.+.| .-| .+|+.++++. +|+|-+|.
T Consensus 202 tleea-~eA~~aGaD~I~LDn-~~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGslt~sa~ 275 (285)
T 1o4u_A 202 NLEDA-LRAVEAGADIVMLDN-LSPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSRLTLQEV 275 (285)
T ss_dssp SHHHH-HHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGGGTSSCC
T ss_pred CHHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeHHHcCCC
Confidence 46677 778899999999998 588999999998865444554433 223 4677777776 89999985
Q ss_pred -CcccCCC
Q 016513 143 -GDLGMEI 149 (388)
Q Consensus 143 -gDLg~e~ 149 (388)
-||++++
T Consensus 276 ~~D~sl~i 283 (285)
T 1o4u_A 276 FVDLSLEI 283 (285)
T ss_dssp CCCEEEEE
T ss_pred CcceEEEE
Confidence 3666553
No 132
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=75.42 E-value=32 Score=30.20 Aligned_cols=125 Identities=16% Similarity=0.101 Sum_probs=69.0
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh-hcCceeecCC---cc----cCCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR-ETDSFMVARG---DL----GMEI 149 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-~~Dgi~igrg---DL----g~e~ 149 (388)
+.+.+.|+|+|.++... .++.++++.++ . ..+-.-..|++-+ .+..+ -+|.+++++- .- +...
T Consensus 88 ~~a~~~gad~v~l~~~~--~~~~~~~~~~g---~-~~~~~s~~t~~e~---~~a~~~g~d~v~~~~v~~t~~~~~~~~~~ 158 (227)
T 2tps_A 88 ELALNLKADGIHIGQED--ANAKEVRAAIG---D-MILGVSAHTMSEV---KQAEEDGADYVGLGPIYPTETKKDTRAVQ 158 (227)
T ss_dssp HHHHHHTCSEEEECTTS--SCHHHHHHHHT---T-SEEEEEECSHHHH---HHHHHHTCSEEEECCSSCCCSSSSCCCCC
T ss_pred HHHHHcCCCEEEECCCc--cCHHHHHHhcC---C-cEEEEecCCHHHH---HHHHhCCCCEEEECCCcCCCCCCCCCCcc
Confidence 44667899999986543 34666665542 2 2222223454432 22222 3799987531 11 2334
Q ss_pred ChhhHHHHHHHHHHHHHHcC-CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHH
Q 016513 150 PVEKIFLAQKMMIYKCNLVG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRR 228 (388)
Q Consensus 150 ~~~~v~~~qk~ii~~c~~~g-kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~ 228 (388)
+++.+..+ ++..+ +|++.+..+ .|. ++..+...|+|++.+++---..+.|.+.++.+.+
T Consensus 159 ~~~~l~~~-------~~~~~~~pvia~GGI--------~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 159 GVSLIEAV-------RRQGISIPIVGIGGI--------TID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218 (227)
T ss_dssp TTHHHHHH-------HHTTCCCCEEEESSC--------CTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CHHHHHHH-------HHhCCCCCEEEEcCC--------CHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHH
Confidence 44444332 22334 898875431 122 3455667799999998654444678777776665
Q ss_pred HHH
Q 016513 229 ICI 231 (388)
Q Consensus 229 i~~ 231 (388)
.++
T Consensus 219 ~~~ 221 (227)
T 2tps_A 219 EIQ 221 (227)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 133
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=74.82 E-value=13 Score=35.04 Aligned_cols=124 Identities=16% Similarity=0.161 Sum_probs=73.2
Q ss_pred hccccCCCCEE-EeC-------------CCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecC
Q 016513 78 RWGVPNNIDMI-ALS-------------FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 78 ~~~l~~g~d~v-~~s-------------fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igr 142 (388)
+.+.+.|+|+| .+- ..++++.++++++.. +++++.++=.- ..+..+...+. +|++. +.
T Consensus 35 ~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~-----~iPv~~k~r~g-~~~~~~~~~a~GAd~V~-~~ 107 (305)
T 2nv1_A 35 KIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV-----SIPVMAKARIG-HIVEARVLEAMGVDYID-ES 107 (305)
T ss_dssp HHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC-----SSCEEEEECTT-CHHHHHHHHHHTCSEEE-EC
T ss_pred HHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC-----CCCEEeccccc-chHHHHHHHHCCCCEEE-Ee
Confidence 67788999999 442 223566677665543 46777776331 02223333333 79986 44
Q ss_pred CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHH
Q 016513 143 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIA 222 (388)
Q Consensus 143 gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~ 222 (388)
.++.. +++ ++.+. |+..|.++++... + ..+...++..|+|.+.++||+..| -..++
T Consensus 108 ~~l~~----~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~~~~ 163 (305)
T 2nv1_A 108 EVLTP----ADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NIVEA 163 (305)
T ss_dssp TTSCC----SCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CTHHH
T ss_pred ccCCH----HHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-chHHH
Confidence 44422 111 11222 4567889887432 2 224456678999999999998777 55677
Q ss_pred HHHHHHHHHH
Q 016513 223 VKIMRRICIE 232 (388)
Q Consensus 223 v~~~~~i~~~ 232 (388)
+...+.+..+
T Consensus 164 ~~h~rt~~~~ 173 (305)
T 2nv1_A 164 VRHMRKVNAQ 173 (305)
T ss_dssp HHHHHHHHHH
T ss_pred Hhhhhhhhcc
Confidence 6766554333
No 134
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=74.66 E-value=6.4 Score=35.37 Aligned_cols=117 Identities=10% Similarity=0.085 Sum_probs=62.7
Q ss_pred CHHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCce--EEEe-------ecCH-------HhHhhHHHHHh
Q 016513 72 DKEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQ--LMSK-------VENQ-------EGVVNFDDILR 133 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~~--Iiak-------IEt~-------~av~nldeI~~ 133 (388)
+.+++ +.+++.|+|.|.+.. ..+++.+.++.+.++. .+. +=++ +.+. ..++.++...+
T Consensus 85 ~~~~~-~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g~---~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~ 160 (244)
T 2y88_A 85 DDESL-AAALATGCARVNVGTAALENPQWCARVIGEHGD---QVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDS 160 (244)
T ss_dssp SHHHH-HHHHHTTCSEEEECHHHHHCHHHHHHHHHHHGG---GEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHH
T ss_pred CHHHH-HHHHHcCCCEEEECchHhhChHHHHHHHHHcCC---CEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHh
Confidence 44566 777888999988764 2445556555555432 211 1112 2222 22455555555
Q ss_pred h-cCceeecCCcc---cCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc---CCce
Q 016513 134 E-TDSFMVARGDL---GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDC 206 (388)
Q Consensus 134 ~-~Dgi~igrgDL---g~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~---g~d~ 206 (388)
. +|.|++-..+. .....++.+.. +. +..+.|++.... .-+. .|+..+... |+|+
T Consensus 161 ~G~~~i~~~~~~~~~~~~g~~~~~~~~----l~---~~~~ipvia~GG---------I~~~---~d~~~~~~~~~~Gad~ 221 (244)
T 2y88_A 161 EGCSRFVVTDITKDGTLGGPNLDLLAG----VA---DRTDAPVIASGG---------VSSL---DDLRAIATLTHRGVEG 221 (244)
T ss_dssp TTCCCEEEEETTTTTTTSCCCHHHHHH----HH---TTCSSCEEEESC---------CCSH---HHHHHHHTTGGGTEEE
T ss_pred CCCCEEEEEecCCccccCCCCHHHHHH----HH---HhCCCCEEEECC---------CCCH---HHHHHHHhhccCCCCE
Confidence 5 78887743332 22223332222 21 235889886443 3333 455566666 9999
Q ss_pred eEecc
Q 016513 207 VMLSG 211 (388)
Q Consensus 207 i~Ls~ 211 (388)
+|+..
T Consensus 222 v~vG~ 226 (244)
T 2y88_A 222 AIVGK 226 (244)
T ss_dssp EEECH
T ss_pred EEEcH
Confidence 99964
No 135
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=74.13 E-value=13 Score=34.71 Aligned_cols=127 Identities=17% Similarity=0.165 Sum_probs=67.3
Q ss_pred hhCHHHHHhcccc-CCCCEEEeCCC------------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh---
Q 016513 70 EKDKEDILRWGVP-NNIDMIALSFV------------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR--- 133 (388)
Q Consensus 70 ~~D~~di~~~~l~-~g~d~v~~sfV------------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~--- 133 (388)
..+....++.+.+ .|+|+|-+.|- .+++.+.++.+.+.+.- +..++.|+= + ++.++.++++
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~-~-~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLS-P-NVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEEC-S-CSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEEC-C-ChHHHHHHHHHHH
Confidence 3444444344555 89999977542 24444455555444331 467888873 1 2233444332
Q ss_pred -h-cCceeecCCcccCC-----------------CChhhHHHHHHHHHHHHH-HcCCCEEEhhhHHHHhhcCCCCChHHH
Q 016513 134 -E-TDSFMVARGDLGME-----------------IPVEKIFLAQKMMIYKCN-LVGKPVVTATQMLESMIKSPRPTRAEA 193 (388)
Q Consensus 134 -~-~Dgi~igrgDLg~e-----------------~~~~~v~~~qk~ii~~c~-~~gkpvi~atq~lesM~~~~~ptraEv 193 (388)
. +|+|.+.-+..+.. -+....+.. -..+...+ ..+.|++.+..+- ..
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~-~~~i~~i~~~~~ipvia~GGI~------------~~ 253 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVA-LKLIHQVAQDVDIPIIGMGGVA------------NA 253 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHH-HHHHHHHHTTCSSCEEECSSCC------------SH
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHH-HHHHHHHHHhcCCCEEEECCcC------------CH
Confidence 2 68888832111100 111222222 23333333 3489998765432 23
Q ss_pred HHHHHHHHcCCceeEeccc
Q 016513 194 TDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 194 ~dv~~av~~g~d~i~Ls~e 212 (388)
.|+..++..|+|++++..-
T Consensus 254 ~d~~~~l~~GAd~V~vg~~ 272 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVGTA 272 (311)
T ss_dssp HHHHHHHHHTCSEEEECTH
T ss_pred HHHHHHHHcCCCEEEECHH
Confidence 4678888899999999744
No 136
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=74.08 E-value=9.1 Score=35.44 Aligned_cols=118 Identities=11% Similarity=0.013 Sum_probs=69.0
Q ss_pred HHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeec--C-CcccCCCC
Q 016513 74 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVA--R-GDLGMEIP 150 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~ig--r-gDLg~e~~ 150 (388)
..+ +.+.+.|+|++++|-.. .+++.++.+.++++|.+ .+..+.-....+.+++|++.++|.+.- . |--|..-+
T Consensus 113 ~~~-~~~~~aGadgii~~d~~-~e~~~~~~~~~~~~g~~--~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~ 188 (268)
T 1qop_A 113 AFY-ARCEQVGVDSVLVADVP-VEESAPFRQAALRHNIA--PIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENR 188 (268)
T ss_dssp HHH-HHHHHHTCCEEEETTCC-GGGCHHHHHHHHHTTCE--EECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSC
T ss_pred HHH-HHHHHcCCCEEEEcCCC-HHHHHHHHHHHHHcCCc--EEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccC
Confidence 445 67788999999998665 46788888888877644 222332223456788999888764322 1 12222222
Q ss_pred h-hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 151 V-EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 151 ~-~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
. +.+....+++-+ ..+.|+++... .-|. .++..++..|+|+++..
T Consensus 189 ~~~~~~~~i~~lr~---~~~~pi~vggG---------I~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 189 GALPLHHLIEKLKE---YHAAPALQGFG---------ISSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp C--CCHHHHHHHHH---TTCCCEEEESS---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred CCchHHHHHHHHHh---ccCCcEEEECC---------CCCH---HHHHHHHHcCCCEEEEC
Confidence 1 112222222211 22788877443 2222 34577789999999985
No 137
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=74.07 E-value=6.6 Score=36.78 Aligned_cols=113 Identities=13% Similarity=0.086 Sum_probs=65.5
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecC---CcccCCCChhhH
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVAR---GDLGMEIPVEKI 154 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igr---gDLg~e~~~~~v 154 (388)
+.+.+.|+|++++|-.-. +++.++.+.+.++|-+ .+..+--....+.+++|.+.+.|....- |--|..-+ .
T Consensus 113 ~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~--~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~---~ 186 (271)
T 1ujp_A 113 GLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLE--TVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRER---L 186 (271)
T ss_dssp HHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCE--EECEECTTCCHHHHHHHHTTCCSCEEEECC-------------
T ss_pred HHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCc--eEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCCC---C
Confidence 567788999999997754 7788888888776643 2233322234578999999887655321 11111111 1
Q ss_pred HHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 155 FLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 155 ~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
..-....++..+++ +.|+++... .-|...+ .. + .|+|+++..
T Consensus 187 ~~~~~~~v~~vr~~~~~Pv~vGfG---------I~t~e~a---~~-~-~~ADgVIVG 229 (271)
T 1ujp_A 187 PEEVKDLVRRIKARTALPVAVGFG---------VSGKATA---AQ-A-AVADGVVVG 229 (271)
T ss_dssp --CCHHHHHHHHTTCCSCEEEESC---------CCSHHHH---HH-H-TTSSEEEEC
T ss_pred CccHHHHHHHHHhhcCCCEEEEcC---------CCCHHHH---HH-h-cCCCEEEEC
Confidence 11112344555554 789987543 3334433 34 3 899999985
No 138
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=73.91 E-value=11 Score=35.98 Aligned_cols=94 Identities=10% Similarity=0.111 Sum_probs=61.0
Q ss_pred hccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 78 RWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
++.++.|+|++++. +.-|.++=+++.+. .+..+.++.+|+-+= |.++++......+. +|++|+-+-.+.
T Consensus 51 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (314)
T 3qze_A 51 DFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYN 130 (314)
T ss_dssp HHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Confidence 77889999999873 33344555444443 344456789999884 56677666666655 799998865443
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
....+.+...-+.|.+ +.+.|+++.
T Consensus 131 -~~s~~~l~~~f~~va~---a~~lPiilY 155 (314)
T 3qze_A 131 -KPTQEGMYQHFRHIAE---AVAIPQILY 155 (314)
T ss_dssp -CCCHHHHHHHHHHHHH---HSCSCEEEE
T ss_pred -CCCHHHHHHHHHHHHH---hcCCCEEEE
Confidence 2234556666566644 458999874
No 139
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=73.86 E-value=28 Score=32.33 Aligned_cols=121 Identities=14% Similarity=0.152 Sum_probs=79.0
Q ss_pred hccccCCCCEEEeCCCC--C---------hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCccc
Q 016513 78 RWGVPNNIDMIALSFVR--K---------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~--s---------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg 146 (388)
+.+.+.|+|.|....-. + .+..+.+++++.+. .+.+++-+-.+..++-+.+. .|.+-||.+++.
T Consensus 44 ~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIga~~~~ 118 (262)
T 1zco_A 44 EFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAKY---SDILQIGARNSQ 118 (262)
T ss_dssp HHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHHH---CSEEEECGGGTT
T ss_pred HHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHhh---CCEEEECccccc
Confidence 66677899988765321 1 77888898888665 47888988888777666554 799999987663
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc-CCceeEec--cccCCCCCHHHH
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLS--GESAAGAYPEIA 222 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~-g~d~i~Ls--~eta~G~~P~~~ 222 (388)
- . .+++++.+.|||+++.|.| .+|..|+.+.+..+.. |.+-++|- |=+..-+||.+.
T Consensus 119 n------~-----~ll~~~a~~~kPV~lk~G~--------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~ 178 (262)
T 1zco_A 119 N------F-----ELLKEVGKVENPVLLKRGM--------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFT 178 (262)
T ss_dssp C------H-----HHHHHHTTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSB
T ss_pred C------H-----HHHHHHHhcCCcEEEecCC--------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhh
Confidence 2 1 1233344589999985432 2578888887876654 55334442 212333666553
No 140
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=73.70 E-value=4.3 Score=38.47 Aligned_cols=64 Identities=14% Similarity=0.116 Sum_probs=48.9
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr 142 (388)
.+.+ +.+++.|+|+|++-. -++++++++++.+...+.++. ||=.-| .+|+.++.+. +|+|-+|.
T Consensus 204 ~eea-~eal~aGaD~I~LDn-~~~~~~~~~v~~l~~~~~~v~----ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQL-DAVLPEKPELILLDN-FAVWQTQTAVQRRDSRAPTVM----LESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHH-HHHGGGCCSEEEEET-CCHHHHHHHHHHHHHHCTTCE----EEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeE----EEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 5666 778889999999998 478999999998876444544 433334 4788999888 89999985
No 141
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=73.61 E-value=8.7 Score=34.59 Aligned_cols=123 Identities=14% Similarity=0.178 Sum_probs=62.8
Q ss_pred CHHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCceEE--E---eecCH-------HhHhhHHHHHhh-cC
Q 016513 72 DKEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQLM--S---KVENQ-------EGVVNFDDILRE-TD 136 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~~Ii--a---kIEt~-------~av~nldeI~~~-~D 136 (388)
+.+++ +.+++.|+|.|.+.. ..+++.+.++.+.++ ..+.+- + ++++. ..++.+.+..+. +|
T Consensus 86 ~~~~~-~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g---~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~ 161 (244)
T 1vzw_A 86 DDDTL-AAALATGCTRVNLGTAALETPEWVAKVIAEHG---DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCA 161 (244)
T ss_dssp SHHHH-HHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG---GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCC
T ss_pred CHHHH-HHHHHcCCCEEEECchHhhCHHHHHHHHHHcC---CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCC
Confidence 45567 778889999988753 234444555555443 222211 1 12322 234445555555 78
Q ss_pred ceeec---CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc---CCceeEec
Q 016513 137 SFMVA---RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD---GTDCVMLS 210 (388)
Q Consensus 137 gi~ig---rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~---g~d~i~Ls 210 (388)
.|++- |+.-+....++.+. ++ +...+.|++.... .-+ ..|+..+... |+|++++.
T Consensus 162 ~i~~~~~~~~~~~~g~~~~~~~----~i---~~~~~ipvia~GG---------I~~---~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 162 RYVVTDIAKDGTLQGPNLELLK----NV---CAATDRPVVASGG---------VSS---LDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp CEEEEEC-------CCCHHHHH----HH---HHTCSSCEEEESC---------CCS---HHHHHHHHTTGGGTEEEEEEC
T ss_pred EEEEeccCcccccCCCCHHHHH----HH---HHhcCCCEEEECC---------CCC---HHHHHHHHhhccCCCceeeee
Confidence 77764 22111112222222 22 2345899987543 222 3455666666 99999997
Q ss_pred cccCCCC
Q 016513 211 GESAAGA 217 (388)
Q Consensus 211 ~eta~G~ 217 (388)
.---.+.
T Consensus 223 ~al~~~~ 229 (244)
T 1vzw_A 223 KALYAKA 229 (244)
T ss_dssp HHHHTTS
T ss_pred HHHHcCC
Confidence 4333344
No 142
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=73.28 E-value=8.7 Score=34.22 Aligned_cols=119 Identities=17% Similarity=0.184 Sum_probs=60.9
Q ss_pred CHHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCce-----------EEEeecC------HHhHhhHHHHH
Q 016513 72 DKEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQ-----------LMSKVEN------QEGVVNFDDIL 132 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~~-----------IiakIEt------~~av~nldeI~ 132 (388)
+.+++ +.+++.|+|+|.+.. ..+++.+.++.+.++. +.+. +..++.. ...++.+..+.
T Consensus 88 ~~~~~-~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~~g~--~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~ 164 (253)
T 1h5y_A 88 SLEDA-TTLFRAGADKVSVNTAAVRNPQLVALLAREFGS--QSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVE 164 (253)
T ss_dssp SHHHH-HHHHHHTCSEEEESHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHH-HHHHHcCCCEEEEChHHhhCcHHHHHHHHHcCC--CcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHH
Confidence 34566 667778999988663 2334444444443321 1111 1233321 12334455555
Q ss_pred hh-cCceeecCCcc---cCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeE
Q 016513 133 RE-TDSFMVARGDL---GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVM 208 (388)
Q Consensus 133 ~~-~Dgi~igrgDL---g~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~ 208 (388)
+. +|.|.+..-+. .....++.+ +++. +..+.|++.... .-+. .|+..+...|+|+++
T Consensus 165 ~~G~d~i~~~~~~~~g~~~~~~~~~i----~~l~---~~~~~pvia~GG---------i~~~---~~~~~~~~~Ga~~v~ 225 (253)
T 1h5y_A 165 ELGAGEILLTSIDRDGTGLGYDVELI----RRVA---DSVRIPVIASGG---------AGRV---EHFYEAAAAGADAVL 225 (253)
T ss_dssp HHTCSEEEEEETTTTTTCSCCCHHHH----HHHH---HHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEE
T ss_pred hCCCCEEEEecccCCCCcCcCCHHHH----HHHH---HhcCCCEEEeCC---------CCCH---HHHHHHHHcCCcHHH
Confidence 55 78887653222 122222222 2222 234789886432 2222 456666778999999
Q ss_pred eccc
Q 016513 209 LSGE 212 (388)
Q Consensus 209 Ls~e 212 (388)
+..-
T Consensus 226 vgsa 229 (253)
T 1h5y_A 226 AASL 229 (253)
T ss_dssp ESHH
T ss_pred HHHH
Confidence 9743
No 143
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=73.24 E-value=5.6 Score=35.86 Aligned_cols=129 Identities=12% Similarity=0.021 Sum_probs=65.7
Q ss_pred hccccCCCCEEEeCCC---CChhhHHHHHHHHccCCCCceEEEee-cCHHhHhhHHHHHhhcCceeecCCcc-cCCCC--
Q 016513 78 RWGVPNNIDMIALSFV---RKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRETDSFMVARGDL-GMEIP-- 150 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV---~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~~Dgi~igrgDL-g~e~~-- 150 (388)
..+.+.|+|+|+++.- ...+++.++.+...+.|- ..+.-+ |+.+ .+.+.++ -.+-|-+.+.++ | .|
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl--~~iv~v~~~~e-~~~~~~~--~~~~i~~~~~~~iG--tG~~ 148 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGL--ETIVCTNNINT-SKAVAAL--SPDCIAVEPPELIG--TGIP 148 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTC--EEEEEESSSHH-HHHHTTT--CCSEEEECCCC---------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCC--eEEEEeCCchH-HHHHHhC--CCCEEEEEeccccc--cCCC
Confidence 4456789999999986 445566666666655543 334444 4433 2222222 124444556665 2 22
Q ss_pred -hhhHHH-HHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 151 -VEKIFL-AQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 151 -~~~v~~-~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
...-+. ++ ...+..++. +.|++... ..-+. .++......|+|+++..+-.-.-..|.+.++.+
T Consensus 149 ~~t~~~~~~~-~~~~~ir~~~~~~~ii~gg---------GI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 149 VSKANPEVVE-GTVRAVKEINKDVKVLCGA---------GISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp -------CSH-HHHHHHHHHCTTCEEEECS---------SCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred CccCCHHHHH-HHHHHHHhccCCCeEEEEe---------CcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 011111 22 233333333 56776532 22222 344556778999999865544455676666554
No 144
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=73.10 E-value=18 Score=34.07 Aligned_cols=95 Identities=11% Similarity=0.115 Sum_probs=61.1
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++- +.-|.++=+++.+. ....+.++.+|+-+= |.++++....--+. +|++++-+-.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYY 118 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 378889999999863 34455555554444 344456789999884 46777766666655 79999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 119 ~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (301)
T 1xky_A 119 NK-PSQEGMYQHFKAI---AESTPLPVMLY 144 (301)
T ss_dssp SC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 22 2345555555555 44558998873
No 145
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=73.02 E-value=13 Score=35.08 Aligned_cols=94 Identities=11% Similarity=0.092 Sum_probs=59.2
Q ss_pred hccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCC-CceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 78 RWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAK-NIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 78 ~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~-~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
++.++.|+|++++. +.-|.++=+++.+. ....+. ++.+|+-+= |.++++.....-+. +|++++-+-.+
T Consensus 35 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 114 (301)
T 3m5v_A 35 KRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYY 114 (301)
T ss_dssp HHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 78889999999763 22244444444443 344456 789999883 56666666555555 79999886544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|.+ +.+.|+++.
T Consensus 115 ~~-~s~~~l~~~f~~va~---a~~lPiilY 140 (301)
T 3m5v_A 115 NK-PTQQGLYEHYKAIAQ---SVDIPVLLY 140 (301)
T ss_dssp SC-CCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 32 234555555555544 458999864
No 146
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=72.91 E-value=21 Score=32.33 Aligned_cols=111 Identities=10% Similarity=0.104 Sum_probs=70.2
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee--c--------CHHhHhhHHHHHhh-cCc
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--E--------NQEGVVNFDDILRE-TDS 137 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--E--------t~~av~nldeI~~~-~Dg 137 (388)
++.+...+++...+.|+.+|.+ .+.++++++|+.. +++++..+ . ++ -++.+++..+. +|.
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~-~~~~i~~~~~aGad~ 104 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITP-YLQDVDALAQAGADI 104 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSC-SHHHHHHHHHHTCSE
T ss_pred CcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCc-cHHHHHHHHHcCCCE
Confidence 4556667745566789999986 6899999988765 34555322 1 11 23456666665 898
Q ss_pred eeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 138 FMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 138 i~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
|.++-..+. .. ...+.+++.+++.|.+++.-. .|..| ...+...|+|.+-.
T Consensus 105 I~l~~~~~~---~p----~~l~~~i~~~~~~g~~v~~~v-----------~t~ee---a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 105 IAFDASFRS---RP----VDIDSLLTRIRLHGLLAMADC-----------STVNE---GISCHQKGIEFIGT 155 (229)
T ss_dssp EEEECCSSC---CS----SCHHHHHHHHHHTTCEEEEEC-----------SSHHH---HHHHHHTTCSEEEC
T ss_pred EEECccccC---Ch----HHHHHHHHHHHHCCCEEEEec-----------CCHHH---HHHHHhCCCCEEEe
Confidence 887643321 11 134567788888899988632 23333 35678889999953
No 147
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=72.53 E-value=9.6 Score=33.89 Aligned_cols=132 Identities=12% Similarity=0.026 Sum_probs=72.9
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCce--EE-EeecCHHhHhhHHHHHhhcCceeecCCcccCCCC----
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQ--LM-SKVENQEGVVNFDDILRETDSFMVARGDLGMEIP---- 150 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~--Ii-akIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~---- 150 (388)
+.+.+.|+|+|.+..--..+.++.+.+.+++.|.... ++ +. |....+.++++ . .+-+.+.++-++.+.|
T Consensus 74 ~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~--t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~ 149 (216)
T 1q6o_A 74 RMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW--TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWG 149 (216)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC--CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCC
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC--ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCC
Confidence 4566889999998776665558888888877665432 22 21 12333444443 1 3333333333333333
Q ss_pred hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHH
Q 016513 151 VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 230 (388)
Q Consensus 151 ~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~ 230 (388)
.+++..+.+ .+ ..+.|+++...+ .|.. +..++..|+|.+....--.....|.++++.+++.+
T Consensus 150 ~~~i~~lr~----~~-~~~~~i~v~GGI--------~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i 211 (216)
T 1q6o_A 150 EADITAIKR----LS-DMGFKVTVTGGL--------ALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSI 211 (216)
T ss_dssp HHHHHHHHH----HH-HTTCEEEEESSC--------CGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHH----hc-CCCCcEEEECCc--------Chhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHH
Confidence 233333322 22 234555543221 2222 35677889999998754434456989988887655
Q ss_pred H
Q 016513 231 I 231 (388)
Q Consensus 231 ~ 231 (388)
.
T Consensus 212 ~ 212 (216)
T 1q6o_A 212 A 212 (216)
T ss_dssp H
T ss_pred H
Confidence 4
No 148
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=72.45 E-value=34 Score=29.83 Aligned_cols=129 Identities=8% Similarity=0.023 Sum_probs=68.6
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCCh
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPV 151 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~ 151 (388)
+..++ +.+++.|+|+|.++. .+. ++. +...+.|. .++.-+.|++-+. .....-+|.+.+-+++ ..++
T Consensus 69 ~~~~i-~~a~~~Gad~V~~~~-~~~-~~~---~~~~~~g~--~~~~g~~t~~e~~--~a~~~G~d~v~v~~t~---~~g~ 135 (212)
T 2v82_A 69 KPEQV-DALARMGCQLIVTPN-IHS-EVI---RRAVGYGM--TVCPGCATATEAF--TALEAGAQALKIFPSS---AFGP 135 (212)
T ss_dssp SHHHH-HHHHHTTCCEEECSS-CCH-HHH---HHHHHTTC--EEECEECSHHHHH--HHHHTTCSEEEETTHH---HHCH
T ss_pred CHHHH-HHHHHcCCCEEEeCC-CCH-HHH---HHHHHcCC--CEEeecCCHHHHH--HHHHCCCCEEEEecCC---CCCH
Confidence 34567 888999999998665 222 222 23333332 3333345544321 1111226888874433 1233
Q ss_pred hhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCC----CCHHHHHHH
Q 016513 152 EKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAG----AYPEIAVKI 225 (388)
Q Consensus 152 ~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G----~~P~~~v~~ 225 (388)
+.+.. + ++.. +.|++....+ +. .++..+...|+|++...+--..+ ..|.+.++.
T Consensus 136 ~~~~~----l---~~~~~~~ipvia~GGI----------~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~ 195 (212)
T 2v82_A 136 QYIKA----L---KAVLPSDIAVFAVGGV----------TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAA 195 (212)
T ss_dssp HHHHH----H---HTTSCTTCEEEEESSC----------CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHH
T ss_pred HHHHH----H---HHhccCCCeEEEeCCC----------CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHH
Confidence 22222 2 2233 3787754321 21 35566777899999986443333 357777777
Q ss_pred HHHHHHHH
Q 016513 226 MRRICIEA 233 (388)
Q Consensus 226 ~~~i~~~a 233 (388)
+.+.+.++
T Consensus 196 l~~~~~~~ 203 (212)
T 2v82_A 196 FVKAYREA 203 (212)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666543
No 149
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=71.92 E-value=28 Score=31.50 Aligned_cols=112 Identities=8% Similarity=0.040 Sum_probs=70.4
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEE--eecCH-------HhHhhHHHHHhh-cCce
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMS--KVENQ-------EGVVNFDDILRE-TDSF 138 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~-------~av~nldeI~~~-~Dgi 138 (388)
++.+...+++...+.|+.+|.+ .+.++++++|+.. +++++. |.+-. .-++.+++..+. +|.|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V 105 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAII 105 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEE
Confidence 4556677755566789999876 5889999988765 345554 22100 123456666665 8988
Q ss_pred eecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 139 MVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 139 ~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
.++-..+.- | ...+.+++.++++|.+++.-. .|..| ...+...|+|.+..
T Consensus 106 ~l~~~~~~~--p-----~~l~~~i~~~~~~g~~v~~~v-----------~t~ee---a~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 106 AVDGTARQR--P-----VAVEALLARIHHHHLLTMADC-----------SSVDD---GLACQRLGADIIGT 155 (232)
T ss_dssp EEECCSSCC--S-----SCHHHHHHHHHHTTCEEEEEC-----------CSHHH---HHHHHHTTCSEEEC
T ss_pred EECccccCC--H-----HHHHHHHHHHHHCCCEEEEeC-----------CCHHH---HHHHHhCCCCEEEE
Confidence 886432211 1 234567788888899988632 23333 35678889999953
No 150
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=71.21 E-value=11 Score=35.67 Aligned_cols=95 Identities=8% Similarity=0.095 Sum_probs=59.3
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. .+..+.++.+|+-+ -|.++++......+. +|++++-+-.+
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 121 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYY 121 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 378889999999764 22244444444443 34446678999988 345666666555555 79999875443
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 122 ~~-~s~~~l~~~f~~v---a~a~~lPiilY 147 (304)
T 3l21_A 122 SK-PPQRGLQAHFTAV---ADATELPMLLY 147 (304)
T ss_dssp SC-CCHHHHHHHHHHH---HTSCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 22 2344555555555 44458999874
No 151
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=71.09 E-value=15 Score=33.35 Aligned_cols=118 Identities=17% Similarity=0.173 Sum_probs=71.5
Q ss_pred HHHHhccccCCCCEEEe-----CCCCC----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCC
Q 016513 74 EDILRWGVPNNIDMIAL-----SFVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARG 143 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~-----sfV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrg 143 (388)
+++ +...+.|+|++.+ .||.+ ++-++++|+..+. ...+-+--++++++. -++...++ +|.+-+..
T Consensus 21 ~~i-~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~-~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH~- 95 (228)
T 3ovp_A 21 AEC-LRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQ-DPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFHL- 95 (228)
T ss_dssp HHH-HHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCS-SSCEEEEEECSCGGG--GHHHHHHHTCSEEEEEG-
T ss_pred HHH-HHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCC-CCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEcc-
Confidence 444 6667789999999 88764 4567777766411 111223347888864 46777665 79888852
Q ss_pred cccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe-ccccCCCC
Q 016513 144 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML-SGESAAGA 217 (388)
Q Consensus 144 DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L-s~eta~G~ 217 (388)
|-+ +. -.+.+++++++|+.++++. ||.-.-.. ...+.+..|.+++ |-+...|.
T Consensus 96 ----Ea~-~~----~~~~i~~i~~~G~k~gval--------~p~t~~e~----l~~~l~~~D~Vl~msv~pGf~G 149 (228)
T 3ovp_A 96 ----EAT-EN----PGALIKDIRENGMKVGLAI--------KPGTSVEY----LAPWANQIDMALVMTVEPGFGG 149 (228)
T ss_dssp ----GGC-SC----HHHHHHHHHHTTCEEEEEE--------CTTSCGGG----TGGGGGGCSEEEEESSCTTTCS
T ss_pred ----CCc-hh----HHHHHHHHHHcCCCEEEEE--------cCCCCHHH----HHHHhccCCeEEEeeecCCCCC
Confidence 111 12 2567788899999998863 23211111 2244456888765 54665554
No 152
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=70.91 E-value=21 Score=33.33 Aligned_cols=90 Identities=18% Similarity=0.261 Sum_probs=52.8
Q ss_pred HHHHhccccCCCCEEE--eCC---CCChhhHH-----------------HHHHHHccCCCCceEEEeec-CH---HhHhh
Q 016513 74 EDILRWGVPNNIDMIA--LSF---VRKGSDLV-----------------NVRKVLGPHAKNIQLMSKVE-NQ---EGVVN 127 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~--~sf---V~sa~dv~-----------------~v~~~l~~~~~~~~IiakIE-t~---~av~n 127 (388)
+.+ +...+.|+|+|- +|| +-+..-++ ++.+.+++.+.+++++.+.. ++ -|+++
T Consensus 36 ~~~-~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~ 114 (267)
T 3vnd_A 36 KII-QTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDE 114 (267)
T ss_dssp HHH-HHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHH
T ss_pred HHH-HHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHH
Confidence 344 555578999754 566 22222232 22233333334677777765 54 36665
Q ss_pred HHHHH-hh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 128 FDDIL-RE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 128 ldeI~-~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
+-+-+ ++ +||+++. ++|.++ .....+.|+++|...+.
T Consensus 115 f~~~~~~aGvdgvii~------Dlp~ee----~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIA------DVPVEE----SAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp HHHHHHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHcCCCEEEeC------CCCHhh----HHHHHHHHHHcCCeEEE
Confidence 54433 33 7999994 555555 45678899999987653
No 153
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=70.49 E-value=2.6 Score=38.06 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=41.7
Q ss_pred CHHHHHhccccCCCCEEEeC-----CCCCh--hhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh-cCceeec
Q 016513 72 DKEDILRWGVPNNIDMIALS-----FVRKG--SDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE-TDSFMVA 141 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-----fV~sa--~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-~Dgi~ig 141 (388)
|...+++...+.|+|+|.+. |.... +.++++++.. +++++. .|.+++ .+++.++. +|++.+|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~-----~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKL-----DVQVELSGGIRDDE---SLAAALATGCARVNVG 103 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHC-----SSEEEEESSCCSHH---HHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhc-----CCcEEEECCCCCHH---HHHHHHHcCCCEEEEC
Confidence 44555466778899999983 55555 3444444332 355665 466654 46666665 8999999
Q ss_pred CCcc
Q 016513 142 RGDL 145 (388)
Q Consensus 142 rgDL 145 (388)
+..|
T Consensus 104 ~~~l 107 (244)
T 2y88_A 104 TAAL 107 (244)
T ss_dssp HHHH
T ss_pred chHh
Confidence 7765
No 154
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=70.41 E-value=31 Score=32.26 Aligned_cols=95 Identities=13% Similarity=0.098 Sum_probs=61.4
Q ss_pred Hhcccc-CCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCc
Q 016513 77 LRWGVP-NNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGD 144 (388)
Q Consensus 77 ~~~~l~-~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgD 144 (388)
+++.++ .|+|+|++. +.-|.++=+++.+. ....+.++++|+-+= |.++++.....-+. +|++++-+-.
T Consensus 30 v~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPF 109 (293)
T ss_dssp HHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 378889 999999863 44455555554444 344456789999984 46777666665554 7999887554
Q ss_pred ccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 145 LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 145 Lg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
+.- .+.+.+...-+.|.+ +.+.|+++.
T Consensus 110 y~~-~~~~~l~~~f~~va~---a~~lPiilY 136 (293)
T 1f6k_A 110 YYK-FSFPEIKHYYDTIIA---ETGSNMIVY 136 (293)
T ss_dssp SSC-CCHHHHHHHHHHHHH---HHCCCEEEE
T ss_pred CCC-CCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 421 234566666666654 447898863
No 155
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=69.97 E-value=14 Score=35.28 Aligned_cols=95 Identities=9% Similarity=0.166 Sum_probs=59.1
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. ....+.++.+|+-+= |.++++......+. +|++++-+-.+
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 128 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYY 128 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 378889999999742 22234444444443 344456789999883 56666666655555 79999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
. ..+.+.+...-+.|.+ +.+.|+++.
T Consensus 129 ~-~~~~~~l~~~f~~va~---a~~lPiilY 154 (315)
T 3si9_A 129 N-RPNQRGLYTHFSSIAK---AISIPIIIY 154 (315)
T ss_dssp S-CCCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred C-CCCHHHHHHHHHHHHH---cCCCCEEEE
Confidence 2 2234556555555544 458999874
No 156
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=69.62 E-value=5 Score=38.07 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=51.2
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecC-------
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVAR------- 142 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igr------- 142 (388)
.+.+.+ +.+++.|+|+|++... +++++++.++.+.. ++++.| +=.. -.+|+.++++. +|+|-+|.
T Consensus 204 ~t~eea-~eA~~aGaD~I~ld~~-~~~~~k~av~~v~~---~ipi~A-sGGI-t~eni~~~a~tGvD~IsVgs~~~~a~~ 276 (286)
T 1x1o_A 204 RSLEEL-EEALEAGADLILLDNF-PLEALREAVRRVGG---RVPLEA-SGNM-TLERAKAAAEAGVDYVSVGALTHSAKA 276 (286)
T ss_dssp SSHHHH-HHHHHHTCSEEEEESC-CHHHHHHHHHHHTT---SSCEEE-ESSC-CHHHHHHHHHHTCSEEECTHHHHSCCC
T ss_pred CCHHHH-HHHHHcCCCEEEECCC-CHHHHHHHHHHhCC---CCeEEE-EcCC-CHHHHHHHHHcCCCEEEEcHHHcCCCc
Confidence 346777 7788999999999986 77888888877742 455555 1111 26888888887 89998873
Q ss_pred CcccCCC
Q 016513 143 GDLGMEI 149 (388)
Q Consensus 143 gDLg~e~ 149 (388)
-||++++
T Consensus 277 ~D~sl~i 283 (286)
T 1x1o_A 277 LDLSLLV 283 (286)
T ss_dssp CCEEEEE
T ss_pred eeeEEEE
Confidence 3666553
No 157
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=69.61 E-value=24 Score=33.24 Aligned_cols=96 Identities=18% Similarity=0.181 Sum_probs=62.1
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++- +.-|.++=+++.+. ....+.++++|+-+= |.++++.....-+. +|++++-+-.+
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFY 117 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCC
Confidence 378889999999863 34455555555444 344456789999884 46777766666555 79998875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|.+++. +.|+++.
T Consensus 118 ~~-~s~~~l~~~f~~va~a~~--~lPiilY 144 (303)
T 2wkj_A 118 YP-FSFEEHCDHYRAIIDSAD--GLPMVVY 144 (303)
T ss_dssp SC-CCHHHHHHHHHHHHHHHT--TCCEEEE
T ss_pred CC-CCHHHHHHHHHHHHHhCC--CCCEEEE
Confidence 22 245666666666655442 2898863
No 158
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=69.21 E-value=19 Score=33.92 Aligned_cols=153 Identities=9% Similarity=0.064 Sum_probs=85.7
Q ss_pred CCCChhCHHHHHhccccC--CCCEEEeCCCCChhhHHHHHHHHccCCC--CceEEEeecCHHhHhhHHHHHhh-cCceee
Q 016513 66 PTLTEKDKEDILRWGVPN--NIDMIALSFVRKGSDLVNVRKVLGPHAK--NIQLMSKVENQEGVVNFDDILRE-TDSFMV 140 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~--g~d~v~~sfV~sa~dv~~v~~~l~~~~~--~~~IiakIEt~~av~nldeI~~~-~Dgi~i 140 (388)
|.-|+.|.+.+.+.+.+. |++.|.++ +..+..+++.+...+. .+.+.+-|==|.|-...+..+.. .+++--
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 445777777666788888 99999875 5567777777753233 57777777444444444333221 122222
Q ss_pred cCCcccCCCChh-----------hHHHHHHHHHHHHHHcCCC--EEEhhhHHHHhhcCCCCChHH-HHHHH-HHHHcCCc
Q 016513 141 ARGDLGMEIPVE-----------KIFLAQKMMIYKCNLVGKP--VVTATQMLESMIKSPRPTRAE-ATDVA-NAVLDGTD 205 (388)
Q Consensus 141 grgDLg~e~~~~-----------~v~~~qk~ii~~c~~~gkp--vi~atq~lesM~~~~~ptraE-v~dv~-~av~~g~d 205 (388)
|.-++-+-+++. .+..-.+.+.++|. ++| ||+.|-.| +..| +.... -++..|+|
T Consensus 119 GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~L---------~d~e~i~~A~~ia~eaGAD 187 (281)
T 2a4a_A 119 GADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLT--NKILKVIIEVGEL---------KTEDLIIKTTLAVLNGNAD 187 (281)
T ss_dssp TCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCT--TSEEEEECCHHHH---------CSHHHHHHHHHHHHTTTCS
T ss_pred CCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhc--CCceEEEEecccC---------CcHHHHHHHHHHHHHhCCC
Confidence 222222222221 23333333444443 456 48888777 4456 32333 37788999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHH
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEA 233 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~a 233 (388)
+|=-|.-=..|.--.+.|+.|++.+++.
T Consensus 188 fVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 188 FIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp EEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 9865522111333468999999988754
No 159
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=68.83 E-value=23 Score=32.41 Aligned_cols=123 Identities=14% Similarity=0.155 Sum_probs=71.5
Q ss_pred ccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh----hcCceeecCC---ccc---CC
Q 016513 79 WGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR----ETDSFMVARG---DLG---ME 148 (388)
Q Consensus 79 ~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~----~~Dgi~igrg---DLg---~e 148 (388)
.+++.|+|+|.++-- .-....+|++++. ...|-.-+ .+.+|+.+ -+|.|.+|+- +.- ..
T Consensus 107 lA~~~gAdGVHLg~~--dl~~~~~r~~~~~---~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~ 175 (243)
T 3o63_A 107 IARAAGADVLHLGQR--DLPVNVARQILAP---DTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAA 175 (243)
T ss_dssp HHHHHTCSEEEECTT--SSCHHHHHHHSCT---TCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----C
T ss_pred HHHHhCCCEEEecCC--cCCHHHHHHhhCC---CCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcch
Confidence 356679999988743 2345666666532 33333333 33444433 2799999862 111 12
Q ss_pred CChhhHHHHHHHHHHHHHH--cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 149 IPVEKIFLAQKMMIYKCNL--VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~--~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
.+++.+..+ +.. .++|++.... . +. .++......|+|++.+.+.--.-..|.++++.+
T Consensus 176 ~gl~~l~~~-------~~~~~~~iPvvAiGG---------I-~~---~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l 235 (243)
T 3o63_A 176 PGLGLVRVA-------AELGGDDKPWFAIGG---------I-NA---QRLPAVLDAGARRIVVVRAITSADDPRAAAEQL 235 (243)
T ss_dssp CCHHHHHHH-------HTC---CCCEEEESS---------C-CT---TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred hhHHHHHHH-------HHhccCCCCEEEecC---------C-CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHH
Confidence 343333222 222 3788875332 1 22 345777888999999876555557899999988
Q ss_pred HHHHHH
Q 016513 227 RRICIE 232 (388)
Q Consensus 227 ~~i~~~ 232 (388)
.+.+.+
T Consensus 236 ~~~~~~ 241 (243)
T 3o63_A 236 RSALTA 241 (243)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 877653
No 160
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=68.81 E-value=23 Score=33.17 Aligned_cols=95 Identities=9% Similarity=0.013 Sum_probs=60.7
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|++++- +.-|.++=+++.+. ....+.++++|+-+= |.++++....--+. +|++++-+-.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 378889999999763 33444444444444 344456789999984 46677666665554 79999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 107 ~~-~s~~~l~~~f~~ia---~a~~lPiilY 132 (289)
T 2yxg_A 107 NK-PTQEGLRKHFGKVA---ESINLPIVLY 132 (289)
T ss_dssp SC-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 22 24455655556654 4558998863
No 161
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=68.80 E-value=20 Score=34.04 Aligned_cols=95 Identities=9% Similarity=-0.002 Sum_probs=57.4
Q ss_pred HhccccCCCCEEEeCC------CCChhhHHHHHHH-HccCCCCceEEEee--cCHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 77 LRWGVPNNIDMIALSF------VRKGSDLVNVRKV-LGPHAKNIQLMSKV--ENQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 77 ~~~~l~~g~d~v~~sf------V~sa~dv~~v~~~-l~~~~~~~~IiakI--Et~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+++.++.|+|+|++.= .-|.++=+++.+. ....+.++.+|+-+ -|.++++......+. +|++++-+-..
T Consensus 39 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y- 117 (316)
T 3e96_A 39 VDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIH- 117 (316)
T ss_dssp HHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCC-
Confidence 3788899999997532 1234444444443 34445678999988 333444444333333 79999874433
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
...+.+.+...-+.|.+++ +.|+++.
T Consensus 118 ~~~s~~~l~~~f~~va~a~---~lPiilY 143 (316)
T 3e96_A 118 PYVTAGGVYAYFRDIIEAL---DFPSLVY 143 (316)
T ss_dssp SCCCHHHHHHHHHHHHHHH---TSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 2234566666666766555 6999874
No 162
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=68.37 E-value=66 Score=28.74 Aligned_cols=104 Identities=16% Similarity=0.087 Sum_probs=61.2
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEe-e---------------cCHHhHhhHHHHH
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK-V---------------ENQEGVVNFDDIL 132 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak-I---------------Et~~av~nldeI~ 132 (388)
.+.+..+..+.+.+.|.|+|=+..- ...+++++++.+.+.|-.+..+.- . +..++++.+...+
T Consensus 21 ~~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i 99 (269)
T 3ngf_A 21 NEVPFLERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIAL 99 (269)
T ss_dssp TTSCHHHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHH
Confidence 3345555448888999999988653 345789999999887654433220 0 0123455555555
Q ss_pred hh-----cCceeecCCcccCCCC----hhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 133 RE-----TDSFMVARGDLGMEIP----VEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 133 ~~-----~Dgi~igrgDLg~e~~----~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
+. ++.+.+.+| ..-..+ ++.+...-+++...|.+.|..+.+
T Consensus 100 ~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 100 HYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLV 149 (269)
T ss_dssp HHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 54 356666566 322222 234445556677777777776654
No 163
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=68.27 E-value=23 Score=32.39 Aligned_cols=130 Identities=14% Similarity=0.098 Sum_probs=73.7
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHH----------hHhhHHHHHhh-cCc
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQE----------GVVNFDDILRE-TDS 137 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~----------av~nldeI~~~-~Dg 137 (388)
+..|...+.+.+.+.|++.|.... .-+..+ ......+..++.++-... -++.+++.++. +|.
T Consensus 43 ~~~~~~~~~~~~~~~g~~~i~~~~----~~~~~~---~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~ 115 (273)
T 2qjg_A 43 GLIDIRKTVNDVAEGGANAVLLHK----GIVRHG---HRGYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADA 115 (273)
T ss_dssp TSSSHHHHHHHHHHHTCSEEEECH----HHHHSC---CCSSSCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhcCCCEEEeCH----HHHHHH---HHhhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCE
Confidence 445666554777889999998642 222211 111223455665553211 14566666665 787
Q ss_pred e--eecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHH-HHHHHcCCceeEec
Q 016513 138 F--MVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDV-ANAVLDGTDCVMLS 210 (388)
Q Consensus 138 i--~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv-~~av~~g~d~i~Ls 210 (388)
| .+-.+. .+.+++...-+++++.|+++|.|+++-+..-.-...+ .-+..++.+. ..+...|+|.+-++
T Consensus 116 v~~~l~~~~----~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~-~~~~~~~~~~a~~a~~~Gad~i~~~ 186 (273)
T 2qjg_A 116 VSIHVNVGS----DEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQN-ERDPELVAHAARLGAELGADIVKTS 186 (273)
T ss_dssp EEEEEEETS----TTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSC-TTCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred EEEEEecCC----CCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCC-CCCHhHHHHHHHHHHHcCCCEEEEC
Confidence 7 332332 2556676777899999999999998732000000000 0123355555 56788999998887
No 164
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=68.22 E-value=25 Score=32.95 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=60.8
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|++++. +.-|.++=+++.+. ....+.++++|+-+= |.++++....-.+. +|++++-+-.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 378889999999863 34455555554444 344456789999884 46677666665554 79999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 107 ~~-~s~~~l~~~f~~v---a~a~~lPiilY 132 (294)
T 2ehh_A 107 NK-PTQRGLYEHFKTV---AQEVDIPIIIY 132 (294)
T ss_dssp SC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 22 2445555555555 44558998873
No 165
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=68.03 E-value=38 Score=32.04 Aligned_cols=129 Identities=14% Similarity=0.129 Sum_probs=74.0
Q ss_pred hccccCCCCEEEeC-CCCCh------hhHHHHHHHHccCCCCceEEEeecCHHh---------HhhHHHHHhh--cCcee
Q 016513 78 RWGVPNNIDMIALS-FVRKG------SDLVNVRKVLGPHAKNIQLMSKVENQEG---------VVNFDDILRE--TDSFM 139 (388)
Q Consensus 78 ~~~l~~g~d~v~~s-fV~sa------~dv~~v~~~l~~~~~~~~IiakIEt~~a---------v~nldeI~~~--~Dgi~ 139 (388)
+.++++|+|.|.+- |+.+. +++.++++.+.+.| +++|+ |++.| +...-.++.. +|.|=
T Consensus 132 e~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G--lpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~VK 207 (295)
T 3glc_A 132 DDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG--MPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQIIK 207 (295)
T ss_dssp HHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT--CCEEE--EECC----CCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC--CEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCEEE
Confidence 56678899987754 33343 23334444454443 55553 55432 2222223322 46544
Q ss_pred ecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCC-CChHHHHHHHHHHHcCCceeEeccccCCCCC
Q 016513 140 VARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPR-PTRAEATDVANAVLDGTDCVMLSGESAAGAY 218 (388)
Q Consensus 140 igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~-ptraEv~dv~~av~~g~d~i~Ls~eta~G~~ 218 (388)
.. ++.+. .+++++.| ..|++++.. +. +++.=...+..++..|++++......--...
T Consensus 208 t~-------~t~e~----~~~vv~~~---~vPVv~~GG--------~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 208 TY-------YVEKG----FERIVAGC---PVPIVIAGG--------KKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp EE-------CCTTT----HHHHHHTC---SSCEEEECC--------SCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred eC-------CCHHH----HHHHHHhC---CCcEEEEEC--------CCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 43 11122 24444444 689886542 12 2222235677899999999999877666679
Q ss_pred HHHHHHHHHHHHHH
Q 016513 219 PEIAVKIMRRICIE 232 (388)
Q Consensus 219 P~~~v~~~~~i~~~ 232 (388)
|.+.++.+..++.+
T Consensus 266 p~~~~~al~~ivh~ 279 (295)
T 3glc_A 266 PVAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988764
No 166
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=67.75 E-value=14 Score=32.61 Aligned_cols=127 Identities=12% Similarity=0.082 Sum_probs=69.6
Q ss_pred HHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh----HhhHHHHHhh-----cCceeecCCc
Q 016513 74 EDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG----VVNFDDILRE-----TDSFMVARGD 144 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a----v~nldeI~~~-----~Dgi~igrgD 144 (388)
..+ +...+.|+|+|.+..--..+-++.+++ .+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 69 ~~v-~~~~~~Gad~vtvh~~~g~~~i~~~~~----~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~- 141 (208)
T 2czd_A 69 LIA-RKVFGAGADYVIVHTFVGRDSVMAVKE----LG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT- 141 (208)
T ss_dssp HHH-HHHHHTTCSEEEEESTTCHHHHHHHHT----TS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS-
T ss_pred HHH-HHHHhcCCCEEEEeccCCHHHHHHHHH----hC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC-
Confidence 444 666789999997776666555554443 22 4455555433221 3444555443 366655421
Q ss_pred ccCCCChhhHHHHHHHHHHHHHHcC-CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHH
Q 016513 145 LGMEIPVEKIFLAQKMMIYKCNLVG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAV 223 (388)
Q Consensus 145 Lg~e~~~~~v~~~qk~ii~~c~~~g-kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v 223 (388)
..+++..+++ .+ + .++++... -.+ +-.++..++..|+|.+..+.--.....|.+++
T Consensus 142 -----~~~~i~~lr~----~~---~~~~~iv~gG--------I~~---~g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~ 198 (208)
T 2czd_A 142 -----RPERIGYIRD----RL---KEGIKILAPG--------IGA---QGGKAKDAVKAGADYIIVGRAIYNAPNPREAA 198 (208)
T ss_dssp -----STHHHHHHHH----HS---CTTCEEEECC--------CCS---STTHHHHHHHHTCSEEEECHHHHTSSSHHHHH
T ss_pred -----ChHHHHHHHH----hC---CCCeEEEECC--------CCC---CCCCHHHHHHcCCCEEEEChHHhcCCCHHHHH
Confidence 2345433322 22 3 34454211 122 22246777888999999865544455698888
Q ss_pred HHHHHHH
Q 016513 224 KIMRRIC 230 (388)
Q Consensus 224 ~~~~~i~ 230 (388)
+.+++.+
T Consensus 199 ~~l~~~i 205 (208)
T 2czd_A 199 KAIYDEI 205 (208)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876544
No 167
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=67.66 E-value=93 Score=30.21 Aligned_cols=154 Identities=13% Similarity=0.099 Sum_probs=96.4
Q ss_pred CChhCHHHHHhccccCCCCEEEeCC-CCChhhHHHHHHHHccCCCCceEEEee-cCHHhHhhHHHHHhh-cC--ceeecC
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSF-VRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE-TD--SFMVAR 142 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sf-V~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~-~D--gi~igr 142 (388)
++..|+..|.+...+.|+|.|=+-| .-++.+.+.++.+. +.+.+..+.+.. .+.+. ++..++. .| .++++-
T Consensus 22 ~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~-~~~~~~~v~~~~r~~~~d---i~~a~~~g~~~v~i~~~~ 97 (382)
T 2ztj_A 22 FSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLA-SLGLKAKVVTHIQCRLDA---AKVAVETGVQGIDLLFGT 97 (382)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHH---HHHHHHTTCSEEEEEECC
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHH-hcCCCcEEEEEcccChhh---HHHHHHcCCCEEEEEecc
Confidence 4667777775666678999999866 45666666655544 445556665543 12333 3443433 45 444554
Q ss_pred CcccCC---CChhhHHHHHHHHHHHHHHcC--CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCC
Q 016513 143 GDLGME---IPVEKIFLAQKMMIYKCNLVG--KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGA 217 (388)
Q Consensus 143 gDLg~e---~~~~~v~~~qk~ii~~c~~~g--kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~ 217 (388)
.|+-.. ...++.....+..++.++++| ..+.+.- ...++-+...+.+++.++.+-+|.+.| .+|.=.-
T Consensus 98 s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~~~~~~~~~~~~~~~~~~~a~~i~l-~DT~G~~ 170 (382)
T 2ztj_A 98 SKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDTFRSEEQDLLAVYEAVAPYVDRVGL-ADTVGVA 170 (382)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTTTTSCHHHHHHHHHHHGGGCSEEEE-EETTSCC
T ss_pred CHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeCCCCCHHHHHHHHHHHHHhcCEEEe-cCCCCCC
Confidence 442222 234666677788999999999 6554421 233455566777888876666999999 4787778
Q ss_pred CHHHHHHHHHHHHHH
Q 016513 218 YPEIAVKIMRRICIE 232 (388)
Q Consensus 218 ~P~~~v~~~~~i~~~ 232 (388)
.|.++-+.++.+.+.
T Consensus 171 ~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 171 TPRQVYALVREVRRV 185 (382)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 899988888877664
No 168
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=66.95 E-value=15 Score=35.44 Aligned_cols=95 Identities=7% Similarity=0.051 Sum_probs=61.4
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. ....+.++.+|+-+= |.++++......+. +|++++-+-.+
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 378889999999863 34455555554444 344456789999984 46777666666555 79998875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 138 ~~-~s~~~l~~~f~~VA---~a~~lPiilY 163 (343)
T 2v9d_A 138 WK-VSEANLIRYFEQVA---DSVTLPVMLY 163 (343)
T ss_dssp SC-CCHHHHHHHHHHHH---HTCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 22 24455655556554 4558999873
No 169
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=66.90 E-value=27 Score=31.33 Aligned_cols=135 Identities=7% Similarity=-0.059 Sum_probs=79.2
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCC--ceEEEeecCHHhHhhHHHHHhh-cCceeecCCccc----CCCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKN--IQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLG----MEIP 150 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~--~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg----~e~~ 150 (388)
+.+.+.|+|++.+.-.-..+.++++++.+++.|.. ..-+..+-+. ..+.+.++++. .|-+.+.++-++ +-.+
T Consensus 76 ~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s 154 (221)
T 3exr_A 76 KNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWG 154 (221)
T ss_dssp HHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCC
T ss_pred HHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccC
Confidence 34567899999987766777799999988776632 2333444422 45566677653 455555554432 2233
Q ss_pred hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHH
Q 016513 151 VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 230 (388)
Q Consensus 151 ~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~ 230 (388)
..++..+++. | ..+.++.+...+ +|. ++..+...|+|.++...--.....|.++++.+.+.+
T Consensus 155 ~~e~~~ir~~----~-~~~~~i~v~gGI--------~~~-----~~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~ 216 (221)
T 3exr_A 155 EKDLNKVKKL----I-EMGFRVSVTGGL--------SVD-----TLKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEI 216 (221)
T ss_dssp HHHHHHHHHH----H-HHTCEEEEESSC--------CGG-----GGGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----h-cCCceEEEECCC--------CHH-----HHHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHH
Confidence 3344433332 2 234444332111 222 234578899999999765444567999888777655
Q ss_pred H
Q 016513 231 I 231 (388)
Q Consensus 231 ~ 231 (388)
+
T Consensus 217 ~ 217 (221)
T 3exr_A 217 K 217 (221)
T ss_dssp H
T ss_pred H
Confidence 3
No 170
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=66.72 E-value=23 Score=33.37 Aligned_cols=95 Identities=11% Similarity=0.164 Sum_probs=60.9
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. ....+.++++|+-+= |.++++.....-+. +|++|+-+-.+
T Consensus 27 v~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (297)
T 2rfg_A 27 VDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYY 106 (297)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 378889999999752 34455555554444 344455788999884 46777766666555 79999876544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 107 ~~-~s~~~l~~~f~~va---~a~~lPiilY 132 (297)
T 2rfg_A 107 NR-PSQEGLYQHFKMVH---DAIDIPIIVY 132 (297)
T ss_dssp TC-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 22 24455555555554 4557898863
No 171
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=66.26 E-value=24 Score=33.11 Aligned_cols=94 Identities=14% Similarity=0.134 Sum_probs=58.7
Q ss_pred hccccCCCCEEEeCCC------CChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 78 RWGVPNNIDMIALSFV------RKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV------~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
++.++.|+|++++.=. -|.++=+++.+. .+..+.++.+|+-+= |.++++......+. +|++++-+-.+.
T Consensus 35 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 114 (297)
T 3flu_A 35 DWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYN 114 (297)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSS
T ss_pred HHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 7888999999986322 234444444443 344456789999883 56666666665555 799998755443
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
..+.+.+...-+.|. .+.+.|+++.
T Consensus 115 -~~~~~~l~~~f~~va---~a~~lPiilY 139 (297)
T 3flu_A 115 -KPSQEGIYQHFKTIA---EATSIPMIIY 139 (297)
T ss_dssp -CCCHHHHHHHHHHHH---HHCCSCEEEE
T ss_pred -CCCHHHHHHHHHHHH---HhCCCCEEEE
Confidence 123455555555554 4458999874
No 172
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=65.95 E-value=29 Score=32.48 Aligned_cols=94 Identities=13% Similarity=0.141 Sum_probs=58.7
Q ss_pred hccccCCCCEEEeCCCC------ChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 78 RWGVPNNIDMIALSFVR------KGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~------sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
++.++.|+|++++.-.. |.++=+++.+. ....+.++.+|+-+= |.++++.....-+. +|++++-+-.+.
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 108 (291)
T 3tak_A 29 EWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYN 108 (291)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSS
T ss_pred HHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 78889999999653321 33444444443 334456789999883 56666666555555 799998765443
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
..+.+.+...-+.|.+ +.+.|+++.
T Consensus 109 -~~~~~~l~~~f~~ia~---a~~lPiilY 133 (291)
T 3tak_A 109 -KPTQEGLYQHYKAIAE---AVELPLILY 133 (291)
T ss_dssp -CCCHHHHHHHHHHHHH---HCCSCEEEE
T ss_pred -CCCHHHHHHHHHHHHH---hcCCCEEEE
Confidence 2234556555566644 458999874
No 173
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=65.90 E-value=80 Score=29.45 Aligned_cols=79 Identities=19% Similarity=0.221 Sum_probs=49.1
Q ss_pred CceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCC
Q 016513 136 DSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAA 215 (388)
Q Consensus 136 Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~ 215 (388)
|.+|--...-|...|+.+ +...+.+.+ ..+.|||+... .-| -+|++.++..|+|++++.+=-+.
T Consensus 158 ~aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~eGG---------I~T---PsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 158 IAVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVDAG---------VGT---ASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp SEEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEESC---------CCS---HHHHHHHHHHTCSEEEESHHHHT
T ss_pred CEEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEeCC---------CCC---HHHHHHHHHcCCCEEEEChHHhC
Confidence 455442222333333333 334455544 46899997543 222 25779999999999999877677
Q ss_pred CCCHHHHHHHHHHHH
Q 016513 216 GAYPEIAVKIMRRIC 230 (388)
Q Consensus 216 G~~P~~~v~~~~~i~ 230 (388)
++.|.+-.+.+..-+
T Consensus 222 a~dP~~ma~af~~Av 236 (265)
T 1wv2_A 222 AKDPVMMAEAMKHAI 236 (265)
T ss_dssp SSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 899977666665544
No 174
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=65.79 E-value=68 Score=29.96 Aligned_cols=123 Identities=15% Similarity=0.151 Sum_probs=76.5
Q ss_pred hccccCCCCEEEeC----------CCC-ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCccc
Q 016513 78 RWGVPNNIDMIALS----------FVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~s----------fV~-sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg 146 (388)
+.+.+.|+|.+-.- |-. ..+..+.+++++.+.| +.+++-+-.++.++-+.+. .|.+-||.+++-
T Consensus 59 ~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~~---vd~~kIgs~~~~ 133 (276)
T 1vs1_A 59 LAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAG--LPVVTEVLDPRHVETVSRY---ADMLQIGARNMQ 133 (276)
T ss_dssp HHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CCEEEECCCGGGHHHHHHH---CSEEEECGGGTT
T ss_pred HHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcC--CcEEEecCCHHHHHHHHHh---CCeEEECccccc
Confidence 45556777765331 110 2577888888876654 7788888888777766664 799999966652
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHH-cCCceeEe-c-cccCCCCCHHHHH
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVML-S-GESAAGAYPEIAV 223 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~-~g~d~i~L-s-~eta~G~~P~~~v 223 (388)
. -.+++++.+.||||++.|.|- .|..|+...++++. .|.+-++| - +=+..-.||.+.+
T Consensus 134 ------n-----~~ll~~~a~~~kPV~lk~G~~--------~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~v 194 (276)
T 1vs1_A 134 ------N-----FPLLREVGRSGKPVLLKRGFG--------NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTL 194 (276)
T ss_dssp ------C-----HHHHHHHHHHTCCEEEECCTT--------CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBC
T ss_pred ------C-----HHHHHHHHccCCeEEEcCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchh
Confidence 1 223444557899999865432 47788888888665 46634444 2 3333334665544
Q ss_pred H
Q 016513 224 K 224 (388)
Q Consensus 224 ~ 224 (388)
.
T Consensus 195 d 195 (276)
T 1vs1_A 195 D 195 (276)
T ss_dssp B
T ss_pred C
Confidence 3
No 175
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=65.77 E-value=68 Score=27.97 Aligned_cols=112 Identities=11% Similarity=0.117 Sum_probs=66.3
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCH---------HhHhhHHHHHhh-cCceee
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQ---------EGVVNFDDILRE-TDSFMV 140 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~---------~av~nldeI~~~-~Dgi~i 140 (388)
.+...+++...+.|++++.+ .+.+.++++++..+ ..++..+-+. .-.+.++..++. +|.+.+
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~~-----~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l 94 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRA---NTKEDILAIKETVD-----LPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIAL 94 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHCC-----SCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred ccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhcC-----CCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEE
Confidence 34455546667889999865 58888888887652 2333211110 012345555554 798888
Q ss_pred cCCcccCCCChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 141 ARGDLGMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 141 grgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
+-.++.- |.+.+ .++++.+++. |+++++-. .|..| ...+...|+|.++++
T Consensus 95 ~~~~~~~--p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 95 DATLQQR--PKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTT 146 (223)
T ss_dssp ECSCSCC--SSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECT
T ss_pred eeecccC--cccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeC
Confidence 7544311 10122 4677777877 88886521 23333 456788999999875
No 176
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=65.67 E-value=61 Score=29.37 Aligned_cols=90 Identities=11% Similarity=0.082 Sum_probs=50.2
Q ss_pred HHHHHhccccCCCCEEEe--CCCC--------------------ChhhHHHHHHHHccCCCCceEEEee-cCHHhHhhHH
Q 016513 73 KEDILRWGVPNNIDMIAL--SFVR--------------------KGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFD 129 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~--sfV~--------------------sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nld 129 (388)
.+.+ +...+.|+|+|-+ ||.. +.++..++.+.+++. .+++++.+. .++.-...++
T Consensus 35 ~~~~-~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~~ 112 (262)
T 1rd5_A 35 AEAL-RLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSLA 112 (262)
T ss_dssp HHHH-HHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCTH
T ss_pred HHHH-HHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHHH
Confidence 3444 6777889998877 4431 333333333344333 345666664 2221111233
Q ss_pred HHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 130 DILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 130 eI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
...++ +||+.+. |+.. ++ -++++..|+++|.+.+.
T Consensus 113 ~a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 113 KMKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVL 148 (262)
T ss_dssp HHHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECE
T ss_pred HHHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEE
Confidence 34444 7999984 5544 22 35677789999988654
No 177
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=65.43 E-value=23 Score=31.05 Aligned_cols=72 Identities=4% Similarity=0.004 Sum_probs=43.5
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
.+...+ ..+.+.|+|+|.+ |-........++++......++++++- .--..+|+.++++. +||+.+|++=+.
T Consensus 109 ~t~~e~-~~a~~~G~d~v~v-~~t~~~g~~~~~~l~~~~~~~ipvia~--GGI~~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 109 ATATEA-FTALEAGAQALKI-FPSSAFGPQYIKALKAVLPSDIAVFAV--GGVTPENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp CSHHHH-HHHHHTTCSEEEE-TTHHHHCHHHHHHHHTTSCTTCEEEEE--SSCCTTTHHHHHHHTCSEEEECTTTCC
T ss_pred CCHHHH-HHHHHCCCCEEEE-ecCCCCCHHHHHHHHHhccCCCeEEEe--CCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 355666 6778899999986 322223445555544433224666552 10124788888877 899999976544
No 178
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=65.38 E-value=31 Score=32.49 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=61.1
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. ....+.++++|+-+= |.++++....--+. +|++++-+-.+
T Consensus 43 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 122 (304)
T 3cpr_A 43 AAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY 122 (304)
T ss_dssp HHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 378889999999863 34455555554444 344456789999984 46677766666554 79999876544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 123 ~~-~~~~~l~~~f~~ia---~a~~lPiilY 148 (304)
T 3cpr_A 123 SK-PSQEGLLAHFGAIA---AATEVPICLY 148 (304)
T ss_dssp SC-CCHHHHHHHHHHHH---HHCCSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 21 23455555555554 4558998863
No 179
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=65.13 E-value=26 Score=32.83 Aligned_cols=94 Identities=10% Similarity=0.138 Sum_probs=59.5
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|++++- +.-|.++=+++.+. ....+.++++|+-+= |.++++....--+. +|++|+-+-.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (292)
T 2vc6_A 27 VEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYY 106 (292)
T ss_dssp HHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 378889999999752 33455554444444 344455788999884 46666666665554 79999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.- .+.+.+...-+.| |.+.+.|+++
T Consensus 107 ~~-~s~~~l~~~f~~i---a~a~~lPiil 131 (292)
T 2vc6_A 107 NK-PTQEGIYQHFKAI---DAASTIPIIV 131 (292)
T ss_dssp SC-CCHHHHHHHHHHH---HHHCSSCEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhCCCCEEE
Confidence 22 2445555555555 4455899887
No 180
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=65.08 E-value=19 Score=33.17 Aligned_cols=129 Identities=15% Similarity=0.126 Sum_probs=75.6
Q ss_pred HHHHhccccCCCCEEEe-----CCCCC----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCC
Q 016513 74 EDILRWGVPNNIDMIAL-----SFVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARG 143 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~-----sfV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrg 143 (388)
+.+ +...+.|+|++.+ .||.+ ++-++++|+.... ..+-+=-|+++++.. ++...++ +|.+-+..
T Consensus 44 ~~i-~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~--~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH~- 117 (246)
T 3inp_A 44 DDV-KAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGIT--AGMDVHLMVKPVDAL--IESFAKAGATSIVFHP- 117 (246)
T ss_dssp HHH-HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCC--SCEEEEEECSSCHHH--HHHHHHHTCSEEEECG-
T ss_pred HHH-HHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCC--CeEEEEEeeCCHHHH--HHHHHHcCCCEEEEcc-
Confidence 444 6666789998887 77654 4567777765411 122343568888664 6666665 79888851
Q ss_pred cccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCC-CCChHHHHHHHHHHHcCCceeEe-ccccCCCC----
Q 016513 144 DLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSP-RPTRAEATDVANAVLDGTDCVML-SGESAAGA---- 217 (388)
Q Consensus 144 DLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~-~ptraEv~dv~~av~~g~d~i~L-s~eta~G~---- 217 (388)
|-. +. -.+.+++++++|+-++++. || .|-.. ...++++.|.+++ |-+...|.
T Consensus 118 ----Ea~-~~----~~~~i~~ir~~G~k~Gval--------np~Tp~e~-----l~~~l~~vD~VlvMsV~PGfgGQ~fi 175 (246)
T 3inp_A 118 ----EAS-EH----IDRSLQLIKSFGIQAGLAL--------NPATGIDC-----LKYVESNIDRVLIMSVNPGFGGQKFI 175 (246)
T ss_dssp ----GGC-SC----HHHHHHHHHTTTSEEEEEE--------CTTCCSGG-----GTTTGGGCSEEEEECSCTTC--CCCC
T ss_pred ----ccc-hh----HHHHHHHHHHcCCeEEEEe--------cCCCCHHH-----HHHHHhcCCEEEEeeecCCCCCcccc
Confidence 111 12 2567788899999999864 33 23211 3355667898876 44544443
Q ss_pred -CHHHHHHHHHHHH
Q 016513 218 -YPEIAVKIMRRIC 230 (388)
Q Consensus 218 -~P~~~v~~~~~i~ 230 (388)
+..+=++.+++++
T Consensus 176 ~~~l~KI~~lr~~~ 189 (246)
T 3inp_A 176 PAMLDKAKEISKWI 189 (246)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 3334444444444
No 181
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=65.02 E-value=42 Score=29.53 Aligned_cols=105 Identities=11% Similarity=0.154 Sum_probs=59.5
Q ss_pred CHHHHHhccccCCCCEEEeC-CCCChhhHHHHHHHHccCCCC-ceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCC
Q 016513 72 DKEDILRWGVPNNIDMIALS-FVRKGSDLVNVRKVLGPHAKN-IQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGME 148 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-fV~sa~dv~~v~~~l~~~~~~-~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e 148 (388)
+..++ ..+++.|+|+|.+. +--+.++..++.+.+.+.+.. ..++. . +.++...+. +|++-++-.|+
T Consensus 31 ~l~~~-~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v--~-----~~~~~a~~~gad~v~l~~~~~--- 99 (221)
T 1yad_A 31 ELARI-IITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVM--N-----GRVDIALFSTIHRVQLPSGSF--- 99 (221)
T ss_dssp HHHHH-HHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEE--E-----SCHHHHHTTTCCEEEECTTSC---
T ss_pred hHHHH-HHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEE--e-----ChHHHHHHcCCCEEEeCCCcc---
Confidence 34566 77889999999774 334556666666655443221 12332 2 344555544 79999875543
Q ss_pred CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 149 IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
+.+. +++ + .. |+.+++.. .|.. ++..+...|+|.++++.
T Consensus 100 -~~~~---~~~-~----~~-~~~ig~sv-----------~t~~---~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 100 -SPKQ---IRA-R----FP-HLHIGRSV-----------HSLE---EAVQAEKEDADYVLFGH 138 (221)
T ss_dssp -CHHH---HHH-H----CT-TCEEEEEE-----------CSHH---HHHHHHHTTCSEEEEEC
T ss_pred -CHHH---HHH-H----CC-CCEEEEEc-----------CCHH---HHHHHHhCCCCEEEECC
Confidence 2211 111 1 11 66666532 1333 34667789999999965
No 182
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=64.34 E-value=26 Score=33.60 Aligned_cols=95 Identities=11% Similarity=0.081 Sum_probs=61.1
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++- +.-|.++=+++.+. ....+.++++|+-+= |.++++....-.+. +|++++.+-.+
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 378889999999863 33455555444444 344456789999884 46777666665554 79999876544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 141 ~~-~s~~~l~~~f~~VA---~a~~lPiilY 166 (332)
T 2r8w_A 141 TP-LTQEEAYHHFAAVA---GATALPLAIY 166 (332)
T ss_dssp SC-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 22 34455665556664 4557898863
No 183
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=63.80 E-value=31 Score=32.78 Aligned_cols=95 Identities=9% Similarity=0.042 Sum_probs=59.2
Q ss_pred hccccCCCCEEEeCC------CCChhhHHHHHHH-HccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCCc-c
Q 016513 78 RWGVPNNIDMIALSF------VRKGSDLVNVRKV-LGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGD-L 145 (388)
Q Consensus 78 ~~~l~~g~d~v~~sf------V~sa~dv~~v~~~-l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrgD-L 145 (388)
++.++.|+|+|++.= .-|.++=+++.+. ....+.++.+|+-+ -|.++++......+. +|++++-+-. +
T Consensus 39 ~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 39 AYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 788899999987642 2344444444443 34446678999988 456666666555554 7999987653 3
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.-....+.+...-+.|.+ +.+.|+++.
T Consensus 119 ~kp~~~~~l~~~f~~ia~---a~~lPiilY 145 (318)
T 3qfe_A 119 GKATTPPVIKSFFDDVSC---QSPLPVVIY 145 (318)
T ss_dssp --CCCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHh---hCCCCEEEE
Confidence 222334566666666654 458999873
No 184
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=63.69 E-value=41 Score=31.80 Aligned_cols=93 Identities=12% Similarity=-0.012 Sum_probs=59.0
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. +... .++.+|+-+ -|.++++......+. +|++++-+-..
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~ 113 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPS 113 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 378889999999763 33344444444444 4444 678999988 455666666555555 79999976542
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcC--CCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVG--KPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~g--kpvi~a 175 (388)
-.+.+.+...-+.|.+ +.+ .|+++.
T Consensus 114 --~~s~~~l~~~f~~va~---a~~~~lPiilY 140 (313)
T 3dz1_A 114 --LRTDEQITTYFRQATE---AIGDDVPWVLQ 140 (313)
T ss_dssp --CCSHHHHHHHHHHHHH---HHCTTSCEEEE
T ss_pred --CCCHHHHHHHHHHHHH---hCCCCCcEEEE
Confidence 2344556555566644 445 898863
No 185
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=63.65 E-value=29 Score=33.40 Aligned_cols=130 Identities=18% Similarity=0.246 Sum_probs=66.5
Q ss_pred CCChhCHHHHH-------hccccCCCCEEEeCC-------------CCChhh------------HHHHHHHHc-cCCCCc
Q 016513 67 TLTEKDKEDIL-------RWGVPNNIDMIALSF-------------VRKGSD------------LVNVRKVLG-PHAKNI 113 (388)
Q Consensus 67 ~lt~~D~~di~-------~~~l~~g~d~v~~sf-------------V~sa~d------------v~~v~~~l~-~~~~~~ 113 (388)
.+|..|++.++ +.+.+.|+|+|=+.. .+...| +.++.+.+. ..|++.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 57777777763 567789999987643 322211 222222222 235667
Q ss_pred eEEEeecC----------HHhHhhHHHHHhh-cCceeecCCcccCC--CChhhHHHHHHHHHHHHH-HcCCCEEEhhhHH
Q 016513 114 QLMSKVEN----------QEGVVNFDDILRE-TDSFMVARGDLGME--IPVEKIFLAQKMMIYKCN-LVGKPVVTATQML 179 (388)
Q Consensus 114 ~IiakIEt----------~~av~nldeI~~~-~Dgi~igrgDLg~e--~~~~~v~~~qk~ii~~c~-~~gkpvi~atq~l 179 (388)
.|..||-- .+.++-+..+.+. .|.|-+.-|....+ ++... ..+-..++..+ ..+.|++....+
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~Ggi- 297 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAP--GFQVPFADAVRKRVGLRTGAVGLI- 297 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCT--TTTHHHHHHHHHHHCCEEEECSSC-
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCc--cccHHHHHHHHHHcCceEEEECCC-
Confidence 78888842 1222222233222 58777764433221 11100 01112222222 248898865432
Q ss_pred HHhhcCCCCChHHHHHHHHHHHcC-CceeEec
Q 016513 180 ESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 210 (388)
Q Consensus 180 esM~~~~~ptraEv~dv~~av~~g-~d~i~Ls 210 (388)
-|. .+...++..| +|+|++.
T Consensus 298 --------~t~---e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 298 --------TTP---EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp --------CCH---HHHHHHHHTTSCSEEEES
T ss_pred --------CCH---HHHHHHHHCCCceEEEec
Confidence 122 2345678888 9999996
No 186
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=63.44 E-value=67 Score=28.78 Aligned_cols=103 Identities=13% Similarity=0.082 Sum_probs=55.1
Q ss_pred CHHHHHhccccCCCCEEEeCCC-------CChhhHHHHHHHHccCCCCceEEEe-ec------CHHhHhhHHHHHhh---
Q 016513 72 DKEDILRWGVPNNIDMIALSFV-------RKGSDLVNVRKVLGPHAKNIQLMSK-VE------NQEGVVNFDDILRE--- 134 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV-------~sa~dv~~v~~~l~~~~~~~~Iiak-IE------t~~av~nldeI~~~--- 134 (388)
+.....+.+.++|.|+|=+... .+.++++++++.+.+.|-.+..++- .. ..+.++.+...++.
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~ 95 (286)
T 3dx5_A 16 SFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANW 95 (286)
T ss_dssp CHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 3344437888999999987432 2357889999999888765443321 10 02334444444443
Q ss_pred --cCceeecCCcccCCCC----hhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 135 --TDSFMVARGDLGMEIP----VEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 135 --~Dgi~igrgDLg~e~~----~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
++.+.+.+|...-... ++.+...-+++...|.++|..+.+
T Consensus 96 lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 141 (286)
T 3dx5_A 96 FKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL 141 (286)
T ss_dssp HTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 2445444443221111 123334445566666666665543
No 187
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=63.19 E-value=23 Score=33.71 Aligned_cols=94 Identities=14% Similarity=0.087 Sum_probs=59.6
Q ss_pred hccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 78 RWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
++.++.|+|+|++. +.-|.++=+++.+. ....+.++.+|+-+= |.++++......+. +|++++-+-.+.
T Consensus 52 ~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 131 (315)
T 3na8_A 52 ERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYW 131 (315)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCC
Confidence 78889999999753 22244444444443 344456788999884 56666666666555 799999865443
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
- .+.+.+...-+.|. .+.+.|+++.
T Consensus 132 ~-~s~~~l~~~f~~va---~a~~lPiilY 156 (315)
T 3na8_A 132 K-LNEAEVFQHYRAVG---EAIGVPVMLY 156 (315)
T ss_dssp C-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred C-CCHHHHHHHHHHHH---HhCCCcEEEE
Confidence 2 24455655555554 4457898864
No 188
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=63.03 E-value=10 Score=35.64 Aligned_cols=130 Identities=11% Similarity=0.065 Sum_probs=66.3
Q ss_pred ChhCHHHHHhccccCCCC---EEEeCCC-----------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh
Q 016513 69 TEKDKEDILRWGVPNNID---MIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE 134 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d---~v~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~ 134 (388)
+..|....++.+.+.|+| +|-+.|- .+.+.+.++.+.+.+. -+..++.|+=.--..+++.++++.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~ 182 (314)
T 2e6f_A 104 SVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAV 182 (314)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHH
Confidence 334444443566677889 8877653 1444444444444322 146788897322112234343432
Q ss_pred ------cCceeecCCc-----ccC-----CC----------ChhhHHHHHHHHHHHHH-Hc-CCCEEEhhhHHHHhhcCC
Q 016513 135 ------TDSFMVARGD-----LGM-----EI----------PVEKIFLAQKMMIYKCN-LV-GKPVVTATQMLESMIKSP 186 (388)
Q Consensus 135 ------~Dgi~igrgD-----Lg~-----e~----------~~~~v~~~qk~ii~~c~-~~-gkpvi~atq~lesM~~~~ 186 (388)
+|+|.+.-.. +.. .+ +....+... ..+...+ .. ..|++....+-
T Consensus 183 ~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~-~~i~~v~~~~~~ipvi~~GGI~------- 254 (314)
T 2e6f_A 183 LNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTAL-ANVNAFYRRCPDKLVFGCGGVY------- 254 (314)
T ss_dssp HHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHH-HHHHHHHHHCTTSEEEEESSCC-------
T ss_pred HHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHH-HHHHHHHHhcCCCCEEEECCCC-------
Confidence 5666543211 100 00 111123223 3344444 44 78888654322
Q ss_pred CCChHHHHHHHHHHHcCCceeEeccc
Q 016513 187 RPTRAEATDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 187 ~ptraEv~dv~~av~~g~d~i~Ls~e 212 (388)
...|+..++..|+|++++..-
T Consensus 255 -----~~~da~~~l~~GAd~V~ig~~ 275 (314)
T 2e6f_A 255 -----SGEDAFLHILAGASMVQVGTA 275 (314)
T ss_dssp -----SHHHHHHHHHHTCSSEEECHH
T ss_pred -----CHHHHHHHHHcCCCEEEEchh
Confidence 235778888899999999744
No 189
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=62.92 E-value=9.4 Score=35.42 Aligned_cols=71 Identities=11% Similarity=0.129 Sum_probs=50.8
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeec--C-HHhHhhHHHHHhh-cCceeecCCcccCCCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVE--N-QEGVVNFDDILRE-TDSFMVARGDLGMEIP 150 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIE--t-~~av~nldeI~~~-~Dgi~igrgDLg~e~~ 150 (388)
+.+.+.|+|||-.||-.+.++++++++.... -.+..+--|- | .++++|+.+.++. +||+.+||.=+..+-|
T Consensus 166 ~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~~--~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp 240 (263)
T 1w8s_A 166 RIALELGADAMKIKYTGDPKTFSWAVKVAGK--VPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDA 240 (263)
T ss_dssp HHHHHHTCSEEEEECCSSHHHHHHHHHHTTT--SCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTH
T ss_pred HHHHHcCCCEEEEcCCCCHHHHHHHHHhCCC--CeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCH
Confidence 5678899999999986678888888876521 0244444442 3 5667788888876 7999999886665533
No 190
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=62.72 E-value=26 Score=35.71 Aligned_cols=96 Identities=14% Similarity=0.107 Sum_probs=56.3
Q ss_pred ChhhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHH----
Q 016513 95 KGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNL---- 167 (388)
Q Consensus 95 sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~---- 167 (388)
+.++++.+++.. +.+|+.| +-+ .+......+. +|+|.++ .|--..+.+... ..+...+.+++++
T Consensus 331 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~~~ 401 (511)
T 1kbi_A 331 TWKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRNLK 401 (511)
T ss_dssp CHHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhccC
Confidence 356777777764 4678888 333 2333333333 7999994 221111222222 2334555555543
Q ss_pred cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 168 VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 168 ~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
...|+|....+- --.|+..++..|||++|+..
T Consensus 402 ~~ipVia~GGI~------------~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 402 DKLEVFVDGGVR------------RGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TTBEEEEESSCC------------SHHHHHHHHHHTCSEEEECH
T ss_pred CCcEEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 267888755432 34788999999999999975
No 191
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=62.45 E-value=44 Score=30.76 Aligned_cols=93 Identities=17% Similarity=0.160 Sum_probs=54.1
Q ss_pred hhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCC
Q 016513 126 VNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGT 204 (388)
Q Consensus 126 ~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~ 204 (388)
+.+..+.+. +|.|+.-.++.|..-+... +...+++.+ ....|+++... .-| -.|+..++..|+
T Consensus 138 ~~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~~---~~~iPviv~gG---------I~t---~eda~~~~~~GA 201 (264)
T 1xm3_A 138 VLARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFIIE---QAKVPVIVDAG---------IGS---PKDAAYAMELGA 201 (264)
T ss_dssp HHHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEESC---------CCS---HHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHHh---cCCCCEEEEeC---------CCC---HHHHHHHHHcCC
Confidence 345555554 5766442444444333222 222233322 35789887432 222 246688889999
Q ss_pred ceeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 205 DCVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 205 d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
|+++...--.....|.++++.+.+.+++..
T Consensus 202 dgViVGSAi~~a~dp~~~~~~l~~~v~~~~ 231 (264)
T 1xm3_A 202 DGVLLNTAVSGADDPVKMARAMKLAVEAGR 231 (264)
T ss_dssp SEEEESHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEcHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 999997644344569888888887776544
No 192
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=62.27 E-value=21 Score=32.41 Aligned_cols=130 Identities=11% Similarity=0.059 Sum_probs=58.8
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChh--hHHHHHHHHccCC--C-Cce--EEE-------eecCHH--------hHhhHH
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGS--DLVNVRKVLGPHA--K-NIQ--LMS-------KVENQE--------GVVNFD 129 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~--dv~~v~~~l~~~~--~-~~~--Iia-------kIEt~~--------av~nld 129 (388)
+..++ ..+++.|+|++++.-.---. +...+++++...+ . .+. +=+ ++++.. ..+.+.
T Consensus 85 ~~~~i-~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~ 163 (266)
T 2w6r_A 85 KMEHF-LEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVV 163 (266)
T ss_dssp STHHH-HHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHH
T ss_pred CHHHH-HHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHH
Confidence 44566 66778899999887432211 4555666655544 2 211 111 122211 223334
Q ss_pred HHHhh-cCceeecC-CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCcee
Q 016513 130 DILRE-TDSFMVAR-GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV 207 (388)
Q Consensus 130 eI~~~-~Dgi~igr-gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i 207 (388)
.+.+. ++.|++.. .--|...+. .+ ...++ .+...+.|++.... .-+.. |+......|+|++
T Consensus 164 ~~~~~G~~~i~~t~~~~~g~~~g~-~~-~~i~~---l~~~~~ipvia~GG---------I~~~e---d~~~~~~~Gadgv 226 (266)
T 2w6r_A 164 EVEKRGAGEILLTSIDRDGTKSGY-DT-EMIRF---VRPLTTLPIIASGG---------AGKME---HFLEAFLAGADAA 226 (266)
T ss_dssp HHHHTTCSEEEEEETTTTTTCSCC-CH-HHHHH---HGGGCCSCEEEESC---------CCSHH---HHHHHHHHTCSEE
T ss_pred HHHHcCCCEEEEEeecCCCCcCCC-CH-HHHHH---HHHHcCCCEEEeCC---------CCCHH---HHHHHHHcCCHHH
Confidence 44443 56666631 101111222 11 11122 23345899986442 33333 5555566799999
Q ss_pred EeccccCCCCCH
Q 016513 208 MLSGESAAGAYP 219 (388)
Q Consensus 208 ~Ls~eta~G~~P 219 (388)
++..---.+.++
T Consensus 227 ~vgsal~~~~~~ 238 (266)
T 2w6r_A 227 LAASVFHFREID 238 (266)
T ss_dssp EESTTTC-----
T ss_pred HccHHHHcCCCC
Confidence 997544444433
No 193
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=61.85 E-value=1.1e+02 Score=28.83 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=26.3
Q ss_pred HhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 016513 269 NKARAKLIVVLTRGGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 269 ~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav 301 (388)
++.+|.+|++--..-..++.+++-= ++|++.+
T Consensus 189 ~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igI 220 (281)
T 1oy0_A 189 AEAGAFAVVMEMVPAELATQITGKL-TIPTVGI 220 (281)
T ss_dssp HHHTCSEEEEESCCHHHHHHHHHHC-SSCEEEE
T ss_pred HHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEe
Confidence 4679999999877667888888776 4999999
No 194
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=61.84 E-value=7.5 Score=36.42 Aligned_cols=64 Identities=9% Similarity=0.093 Sum_probs=47.0
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr 142 (388)
.+.+ ..+++.|+|+|.++. -++++++++++.+....++++|.| .-| .+|+.++++. +|++-+|.
T Consensus 192 lee~-~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~A----sGGI~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 192 FEEA-KNAMNAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEA----SGNISLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHH-HHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEE----ESSCCTTTHHHHHTTTCSEEECTH
T ss_pred HHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEE----ECCCCHHHHHHHHHcCCcEEEEcH
Confidence 4556 677889999999987 468999998888865444555544 123 4788888887 79888874
No 195
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=61.68 E-value=13 Score=36.99 Aligned_cols=103 Identities=13% Similarity=0.087 Sum_probs=58.6
Q ss_pred ccccCCCCChhCHHHHHhccccCCCCEEEeCCCCC---------------------h---hhHHHHHHHHccCCCCceEE
Q 016513 61 VVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRK---------------------G---SDLVNVRKVLGPHAKNIQLM 116 (388)
Q Consensus 61 ~~~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~s---------------------a---~dv~~v~~~l~~~~~~~~Ii 116 (388)
+++. |.+++.|..++++.+.+.|+|+|.++.--. + +-+.++++.+ +.++.||
T Consensus 274 VKi~-pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v---~~~iPII 349 (415)
T 3i65_A 274 VKLA-PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT---NKQIPII 349 (415)
T ss_dssp EEEC-SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHT---TTCSCEE
T ss_pred EEec-CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHh---CCCCCEE
Confidence 3443 556776777776778899999999997421 0 2233333333 3467777
Q ss_pred Ee--ecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCC
Q 016513 117 SK--VENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKP 171 (388)
Q Consensus 117 ak--IEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkp 171 (388)
+- |.|.+-+ .+-|..-+|++++||+=+.- |..-+..+.+.+-+...+.|..
T Consensus 350 g~GGI~s~eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 350 ASGGIFSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp ECSSCCSHHHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred EECCCCCHHHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 63 4444322 23333338999999885521 2223444555555555555543
No 196
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=61.59 E-value=20 Score=33.04 Aligned_cols=131 Identities=11% Similarity=0.034 Sum_probs=72.8
Q ss_pred CHHHHHhccccCCCCEEEeCCC-CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC-C
Q 016513 72 DKEDILRWGVPNNIDMIALSFV-RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM-E 148 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV-~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~-e 148 (388)
|...+ ..+.+.|+|+|.+.-. -+ ++++++.+.....| +..+.-+.+.+ .++..++. +|-|-++.-+|.. .
T Consensus 117 d~~qi-~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG--l~~lvev~~~~---E~~~a~~~gad~IGvn~~~l~~~~ 189 (254)
T 1vc4_A 117 DPFML-EEARAFGASAALLIVALLG-ELTGAYLEEARRLG--LEALVEVHTER---ELEIALEAGAEVLGINNRDLATLH 189 (254)
T ss_dssp SHHHH-HHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT--CEEEEEECSHH---HHHHHHHHTCSEEEEESBCTTTCC
T ss_pred CHHHH-HHHHHcCCCEEEECccchH-HHHHHHHHHHHHCC--CeEEEEECCHH---HHHHHHHcCCCEEEEccccCcCCC
Confidence 34456 6788999999987432 11 55555555443444 23333333433 23333332 5777777655531 1
Q ss_pred CChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHH
Q 016513 149 IPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIM 226 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~ 226 (388)
..++... ++....... ++|++. ....-|.+ |+..... |+|+++...---.+..|.++++.+
T Consensus 190 ~dl~~~~----~L~~~i~~~~~~~~vIA---------egGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 190 INLETAP----RLGRLARKRGFGGVLVA---------ESGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp BCTTHHH----HHHHHHHHTTCCSEEEE---------ESCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred CCHHHHH----HHHHhCccccCCCeEEE---------EcCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 1222322 233333333 567664 23444444 5566677 999999976666678888887765
No 197
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=61.38 E-value=61 Score=30.13 Aligned_cols=94 Identities=7% Similarity=-0.096 Sum_probs=60.7
Q ss_pred HhccccCCCCEEEe------CCCCChhhHHHHHHHHccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 77 LRWGVPNNIDMIAL------SFVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 77 ~~~~l~~g~d~v~~------sfV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+++.++.|+|++++ .+.-|.++=+++.+...+.... +|+-+= |.++++....--+. +|++++-+-.+.
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 103 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYF 103 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 37888999999986 3445666666666665444333 888873 46677666666554 799998765543
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-..+.+.+...-+.|. .+.+.|+++.
T Consensus 104 ~~~s~~~l~~~f~~va---~a~~lPiilY 129 (288)
T 2nuw_A 104 PRLPEKFLAKYYEEIA---RISSHSLYIY 129 (288)
T ss_dssp CSCCHHHHHHHHHHHH---HHCCSCEEEE
T ss_pred CCCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 2124455655556654 4558999873
No 198
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=61.35 E-value=35 Score=33.21 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=65.6
Q ss_pred CCCCEEEeCC----------CCChhhHHHHHHHHccC------CCCceEEEeecCHHhHhhHHHHHhh-----cCceeec
Q 016513 83 NNIDMIALSF----------VRKGSDLVNVRKVLGPH------AKNIQLMSKVENQEGVVNFDDILRE-----TDSFMVA 141 (388)
Q Consensus 83 ~g~d~v~~sf----------V~sa~dv~~v~~~l~~~------~~~~~IiakIEt~~av~nldeI~~~-----~Dgi~ig 141 (388)
.++|+|-+.+ -++++.+.++.+.+.+. ..+.+|+.||=---..+++.+|++. +|||.+-
T Consensus 175 ~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 175 PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 3588887643 23455566655555321 2457899999321112355555553 6888864
Q ss_pred -----CCc-----ccCCCC----hhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCc
Q 016513 142 -----RGD-----LGMEIP----VEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTD 205 (388)
Q Consensus 142 -----rgD-----Lg~e~~----~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d 205 (388)
|-+ ++.+.+ ....+...+.+-+..++. ..|+|....+. ...|+..++..|+|
T Consensus 255 ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~------------s~~da~~~l~~GAd 322 (367)
T 3zwt_A 255 NTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS------------SGQDALEKIRAGAS 322 (367)
T ss_dssp CCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC------------SHHHHHHHHHHTCS
T ss_pred CCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC------------CHHHHHHHHHcCCC
Confidence 211 111121 122333334443444445 68998765433 24577888889999
Q ss_pred eeEeccc
Q 016513 206 CVMLSGE 212 (388)
Q Consensus 206 ~i~Ls~e 212 (388)
+||+..-
T Consensus 323 ~V~vgra 329 (367)
T 3zwt_A 323 LVQLYTA 329 (367)
T ss_dssp EEEESHH
T ss_pred EEEECHH
Confidence 9999743
No 199
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=61.28 E-value=18 Score=36.40 Aligned_cols=107 Identities=13% Similarity=0.084 Sum_probs=60.3
Q ss_pred cccC--CccccCCCCChhCHHHHHhccccCCCCEEEeCCCCC------------------------hhhHHHHHHHHccC
Q 016513 56 VNLP--GVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRK------------------------GSDLVNVRKVLGPH 109 (388)
Q Consensus 56 vn~p--~~~~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~s------------------------a~dv~~v~~~l~~~ 109 (388)
.++| .+++. |.+++.|..++++.+.+.|+|+|.++.-.. .+-+.++++.+
T Consensus 295 ~~~P~V~vKis-pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v--- 370 (443)
T 1tv5_A 295 KKKPLVFVKLA-PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYT--- 370 (443)
T ss_dssp SSCCEEEEEEC-SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHT---
T ss_pred CCCCeEEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHc---
Confidence 3455 33333 446666777776778899999999987421 12233333333
Q ss_pred CCCceEEE--eecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCC
Q 016513 110 AKNIQLMS--KVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGK 170 (388)
Q Consensus 110 ~~~~~Iia--kIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gk 170 (388)
+.++.||+ -|.|.+-. .+-|..-+|++++||+=+-- +..-+..+.+.+-....+.|.
T Consensus 371 ~~~iPVIg~GGI~s~~DA--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 371 NKQIPIIASGGIFSGLDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp TTCSCEEEESSCCSHHHH--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEECCCCCHHHH--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCC
Confidence 34677877 56665443 33333348999999985521 222233344444444444554
No 200
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=60.94 E-value=13 Score=29.69 Aligned_cols=41 Identities=32% Similarity=0.382 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|++.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 4566677888999999988775 2789999998886 999864
No 201
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=60.46 E-value=24 Score=32.11 Aligned_cols=115 Identities=10% Similarity=0.073 Sum_probs=63.7
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCc-eeecC--CcccCCCCh-hh
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDS-FMVAR--GDLGMEIPV-EK 153 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dg-i~igr--gDLg~e~~~-~~ 153 (388)
+.+.+.|+|+|.++-.. .++++++.+.+.++|.+..+...-. ...+.+.++.+..++ +.+.. |--|..-+. +.
T Consensus 112 ~~a~~aGadgv~v~d~~-~~~~~~~~~~~~~~g~~~i~~~a~~--t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~ 188 (262)
T 1rd5_A 112 AKMKEAGVHGLIVPDLP-YVAAHSLWSEAKNNNLELVLLTTPA--IPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPR 188 (262)
T ss_dssp HHHHHTTCCEEECTTCB-TTTHHHHHHHHHHTTCEECEEECTT--SCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTH
T ss_pred HHHHHcCCCEEEEcCCC-hhhHHHHHHHHHHcCCceEEEECCC--CCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCch
Confidence 34678999999997543 4567788777777665433322222 335667777777665 33322 112222222 12
Q ss_pred HHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 154 IFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 154 v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
.....+++ .+..+.|+++... .-|. .++......|+|++...
T Consensus 189 ~~~~i~~v---~~~~~~pI~vgGG---------I~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEV---KKVTNKPVAVGFG---------ISKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHH---HHHCSSCEEEESC---------CCSH---HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHH---HhhcCCeEEEECC---------cCCH---HHHHHHHHcCCCEEEEC
Confidence 22222222 2234789887443 2222 34566677899999875
No 202
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=60.42 E-value=27 Score=32.98 Aligned_cols=95 Identities=8% Similarity=0.087 Sum_probs=61.1
Q ss_pred HhccccCCCCEEEe------CCCCChhhHHHHHHHH-ccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIAL------SFVRKGSDLVNVRKVL-GPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~------sfV~sa~dv~~v~~~l-~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|++++ .+.-|.++=+++.+.. ...+.++++|+-+= |.++++....--+. +|++++-+-.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 37888999999986 3345555555554443 44456789999884 46677666665554 79999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.| |.+.+.|+++.
T Consensus 119 ~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (306)
T 1o5k_A 119 NK-PTQEGLYQHYKYI---SERTDLGIVVY 144 (306)
T ss_dssp SC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 22 2445555555555 44557998873
No 203
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=60.24 E-value=29 Score=32.97 Aligned_cols=95 Identities=8% Similarity=0.069 Sum_probs=58.6
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec--CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE--NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE--t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+++.++.|+|+|++. +.-|.++=+++.+. ....+.++++|+-+= |.++++.....-+. +|++++-+-.+.
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~ 118 (314)
T 3d0c_A 39 VEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHP 118 (314)
T ss_dssp HHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCS
T ss_pred HHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 378889999999753 23455554444443 444456789999885 44555555444444 799998755442
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
- .+.+.+...-+.| |.+.+.|+++.
T Consensus 119 ~-~s~~~l~~~f~~v---a~a~~lPiilY 143 (314)
T 3d0c_A 119 Y-ITDAGAVEYYRNI---IEALDAPSIIY 143 (314)
T ss_dssp C-CCHHHHHHHHHHH---HHHSSSCEEEE
T ss_pred C-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 1 2345555555555 44567998873
No 204
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=60.05 E-value=21 Score=28.36 Aligned_cols=41 Identities=34% Similarity=0.484 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTRG---------GTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~s---------G~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|++.+++.||+-++. |+++..+.+.- +|||+.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~-~~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC-CCCEEEe
Confidence 45666788899999999998863 78899998886 5999987
No 205
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=60.03 E-value=15 Score=35.77 Aligned_cols=129 Identities=12% Similarity=0.071 Sum_probs=67.8
Q ss_pred ChhCHHHHHhccc---cCCCCEEEeCCC-----------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh-
Q 016513 69 TEKDKEDILRWGV---PNNIDMIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR- 133 (388)
Q Consensus 69 t~~D~~di~~~~l---~~g~d~v~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~- 133 (388)
+..|....++..- +.|+|+|-+.+- ++++.+.++.+.+.+. .+++|+.||=----.+++.++++
T Consensus 137 ~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~ 215 (354)
T 4ef8_A 137 SMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEI 215 (354)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHH
Confidence 3444444423333 357898876543 3566666666666543 25789999942212233444443
Q ss_pred -----hcCceeec----CC---cc---------cCC---CChhhH-HHHHHHHHHHHHH-c-CCCEEEhhhHHHHhhcCC
Q 016513 134 -----ETDSFMVA----RG---DL---------GME---IPVEKI-FLAQKMMIYKCNL-V-GKPVVTATQMLESMIKSP 186 (388)
Q Consensus 134 -----~~Dgi~ig----rg---DL---------g~e---~~~~~v-~~~qk~ii~~c~~-~-gkpvi~atq~lesM~~~~ 186 (388)
-+|+|.+- +| |+ ... +.-..+ +... +++...++ . ..|+|....+.
T Consensus 216 ~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~-~~i~~v~~~~~~ipII~~GGI~------- 287 (354)
T 4ef8_A 216 LNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTAL-ANINAFYRRCPGKLIFGCGGVY------- 287 (354)
T ss_dssp HHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHH-HHHHHHHHHCTTSEEEEESCCC-------
T ss_pred HHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHH-HHHHHHHHhCCCCCEEEECCcC-------
Confidence 15666531 11 10 001 101122 3333 33444444 3 47887654332
Q ss_pred CCChHHHHHHHHHHHcCCceeEecc
Q 016513 187 RPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 187 ~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
...|+..++..|+|++|+..
T Consensus 288 -----s~~da~~~l~aGAd~V~vgr 307 (354)
T 4ef8_A 288 -----TGEDAFLHVLAGASMVQVGT 307 (354)
T ss_dssp -----SHHHHHHHHHHTEEEEEECH
T ss_pred -----CHHHHHHHHHcCCCEEEEhH
Confidence 23577888999999999964
No 206
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=59.97 E-value=45 Score=33.19 Aligned_cols=116 Identities=14% Similarity=0.203 Sum_probs=65.3
Q ss_pred CCCEEEeCCC----------CChhhHHHHHHHHccC-------------------CCCce-EEEeecCHHhHhhHHHHHh
Q 016513 84 NIDMIALSFV----------RKGSDLVNVRKVLGPH-------------------AKNIQ-LMSKVENQEGVVNFDDILR 133 (388)
Q Consensus 84 g~d~v~~sfV----------~sa~dv~~v~~~l~~~-------------------~~~~~-IiakIEt~~av~nldeI~~ 133 (388)
-+|+|-+.+- ++++.+.++.+.+.+. ..+.+ |+.||=---.-+++.+|++
T Consensus 211 ~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~ 290 (415)
T 3i65_A 211 YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIAD 290 (415)
T ss_dssp GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHH
T ss_pred hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHH
Confidence 3888875432 5566666655554332 13566 8999932111224566655
Q ss_pred h-----cCceeecC-----Ccc---cCCCC----hhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHH
Q 016513 134 E-----TDSFMVAR-----GDL---GMEIP----VEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEAT 194 (388)
Q Consensus 134 ~-----~Dgi~igr-----gDL---g~e~~----~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~ 194 (388)
. +|||.+-- -|+ +.+.+ ....+...+.+-+..++. .+|+|....+. -..
T Consensus 291 ~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~------------s~e 358 (415)
T 3i65_A 291 VLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF------------SGL 358 (415)
T ss_dssp HHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC------------SHH
T ss_pred HHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC------------CHH
Confidence 4 69888762 121 11111 123344444444444444 58988755433 346
Q ss_pred HHHHHHHcCCceeEecc
Q 016513 195 DVANAVLDGTDCVMLSG 211 (388)
Q Consensus 195 dv~~av~~g~d~i~Ls~ 211 (388)
|+..++..|+|+|++..
T Consensus 359 Da~e~l~aGAd~VqIgr 375 (415)
T 3i65_A 359 DALEKIEAGASVCQLYS 375 (415)
T ss_dssp HHHHHHHHTEEEEEESH
T ss_pred HHHHHHHcCCCEEEEcH
Confidence 78899999999999963
No 207
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=59.78 E-value=30 Score=35.09 Aligned_cols=122 Identities=17% Similarity=0.234 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|..+....+...-..|++.+....+... ..+..+++...+++++....++.
T Consensus 127 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~ 194 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNSIVL 194 (527)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSEECC
T ss_pred HHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCcEec
Confidence 4556788899998763 23333334556667789998877654221 12334555555555543222211
Q ss_pred HHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
.+ |. .|.++..-....+.++.++++ .++|++.+-+|.|.--++++ .|.+.|+++
T Consensus 195 ~~-~~-------n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigv 254 (527)
T 3pc3_A 195 DQ-YR-------NAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGV 254 (527)
T ss_dssp CT-TT-------CTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CC-CC-------CcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 10 00 011122223345677887774 79999999999987766654 799999999
No 208
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=59.54 E-value=1.1e+02 Score=28.55 Aligned_cols=94 Identities=11% Similarity=0.027 Sum_probs=61.2
Q ss_pred CChhCHHHHHhccccCCCCEEEeCCC-------------CChhhHHHHHHHHccCCCCceEEEeecC------HHhHhhH
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSFV-------------RKGSDLVNVRKVLGPHAKNIQLMSKVEN------QEGVVNF 128 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sfV-------------~sa~dv~~v~~~l~~~~~~~~IiakIEt------~~av~nl 128 (388)
+|.+|..-- +.+-++|+|.|++..- -+.+|+..-.+.+.+.-++..+++=+|+ .++++|.
T Consensus 34 ~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a 112 (275)
T 3vav_A 34 LTCYDASFA-ALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASA 112 (275)
T ss_dssp EECCSHHHH-HHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHH
T ss_pred EeCcCHHHH-HHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHH
Confidence 466787776 7777899999987621 1234444333334344456889999998 4677888
Q ss_pred HHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 129 DDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 129 deI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
..+++. +++|-+-=|. . .-..|++..++|+|++-
T Consensus 113 ~rl~kaGa~aVklEdg~--------~----~~~~i~~l~~~GIpv~g 147 (275)
T 3vav_A 113 VKLMRAGAQMVKFEGGE--------W----LAETVRFLVERAVPVCA 147 (275)
T ss_dssp HHHHHTTCSEEEEECCG--------G----GHHHHHHHHHTTCCEEE
T ss_pred HHHHHcCCCEEEECCch--------h----HHHHHHHHHHCCCCEEE
Confidence 888875 6777774331 1 23345555679999873
No 209
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=59.37 E-value=12 Score=35.90 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=45.9
Q ss_pred CHHHHHhccccCCCCEEEeCCCCC-----hh---------hHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhhc
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRK-----GS---------DLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRET 135 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~s-----a~---------dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~~ 135 (388)
+.++. +.+.+.|+|+|.++.--- .. .+..+.+..... ++.||+ -|-|..-+ +..+..=+
T Consensus 159 s~e~A-~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv--~kalalGA 233 (336)
T 1ypf_A 159 TPEAV-RELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDV--AKSIRFGA 233 (336)
T ss_dssp SHHHH-HHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHH--HHHHHTTC
T ss_pred CHHHH-HHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHH--HHHHHcCC
Confidence 35676 788899999999964320 00 233343333322 678888 67665544 33333348
Q ss_pred CceeecCCcccCCC
Q 016513 136 DSFMVARGDLGMEI 149 (388)
Q Consensus 136 Dgi~igrgDLg~e~ 149 (388)
|++++||.=|+.+-
T Consensus 234 daV~iGr~~l~t~E 247 (336)
T 1ypf_A 234 TMVMIGSLFAGHEE 247 (336)
T ss_dssp SEEEESGGGTTCTT
T ss_pred CEEEeChhhhcccc
Confidence 99999999986544
No 210
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=59.35 E-value=24 Score=32.78 Aligned_cols=104 Identities=10% Similarity=0.039 Sum_probs=61.1
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee---cC--------HHhHhhHHHHHhhcCcee
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV---EN--------QEGVVNFDDILRETDSFM 139 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI---Et--------~~av~nldeI~~~~Dgi~ 139 (388)
.|...+++.+.++|++.++++-+ +.++.+.+.++..+.+ ++...+=| +. .+.++.+++.++..+.-.
T Consensus 27 ~d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 104 (301)
T 2xio_A 27 DDLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKV 104 (301)
T ss_dssp CCHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTE
T ss_pred cCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCe
Confidence 35666557788899999888754 6788888877776543 32222222 11 123444555444322234
Q ss_pred ecCCcccCCCCh-h-hHHHHH----HHHHHHHHHcCCCEEEhh
Q 016513 140 VARGDLGMEIPV-E-KIFLAQ----KMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 140 igrgDLg~e~~~-~-~v~~~q----k~ii~~c~~~gkpvi~at 176 (388)
+|=|..|.+... . .-...| +..++.|++.|+|+++-|
T Consensus 105 ~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 105 VAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp EEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred EEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 455666666532 1 112334 566788999999999865
No 211
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=59.07 E-value=1.2e+02 Score=28.64 Aligned_cols=32 Identities=6% Similarity=0.146 Sum_probs=22.1
Q ss_pred HcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcC-CceeEec
Q 016513 167 LVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 210 (388)
Q Consensus 167 ~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g-~d~i~Ls 210 (388)
..++|++....+ -|. .|...++..| +|+|++.
T Consensus 275 ~~~iPVi~~Ggi---------~s~---~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 275 QADMATGAVGMI---------TDG---SMAEEILQNGRADLIFIG 307 (338)
T ss_dssp HHCCEEEECSSC---------CSH---HHHHHHHHTTSCSEEEEC
T ss_pred HCCCCEEEECCC---------CCH---HHHHHHHHcCCceEEeec
Confidence 348999875432 222 3556788888 9999996
No 212
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=59.06 E-value=72 Score=32.89 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=49.0
Q ss_pred EeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCc-------------------cccCCCCChhCHHHHHhccc
Q 016513 21 CADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGV-------------------VVDLPTLTEKDKEDILRWGV 81 (388)
Q Consensus 21 iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~-------------------~~~~~~lt~~D~~di~~~~l 81 (388)
++++.+..+|.. +..+ -.+=|.=.++..+++|.. .++... +..|...+ +..+
T Consensus 207 v~~~~v~~~V~~----gG~L---~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr-~a~Dv~~~-r~~L 277 (550)
T 3gr4_A 207 KGADFLVTEVEN----GGSL---GSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIR-KASDVHEV-RKVL 277 (550)
T ss_dssp ECSSEEEEEEEE----CEEE---CSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCC-SHHHHHHH-HHHH
T ss_pred EeCCEEEEEEEe----CcEE---cCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCC-CHHHHHHH-HHHH
Confidence 566778778762 2222 124456667777888732 122222 45666666 4434
Q ss_pred -cCCCCEEEeCCCCChhhHHHHHHHH
Q 016513 82 -PNNIDMIALSFVRKGSDLVNVRKVL 106 (388)
Q Consensus 82 -~~g~d~v~~sfV~sa~dv~~v~~~l 106 (388)
+.|.+.-+++++++++-++.+.+++
T Consensus 278 ~~~g~~i~IIAKIE~~eav~nldeIl 303 (550)
T 3gr4_A 278 GEKGKNIKIISKIENHEGVRRFDEIL 303 (550)
T ss_dssp TTTTTTSEEEEEECSHHHHHTHHHHH
T ss_pred HhcCCCceEEEEeCCHHHHHHHHHHH
Confidence 4566777889999999999998886
No 213
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=59.00 E-value=1e+02 Score=29.25 Aligned_cols=113 Identities=20% Similarity=0.286 Sum_probs=69.8
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+.- |..+....+...-..|++.+...+. .-++.+...+++++-...+.
T Consensus 90 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~v~~~------~~~~~~~a~~l~~~~~~~~i- 151 (346)
T 3l6b_A 90 ALTYAAKLEGIPAYIVV-----------PQTAPDCKKLAIQAYGASIVYCEPS------DESRENVAKRVTEETEGIMV- 151 (346)
T ss_dssp HHHHHHHHTTCCEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECSS------HHHHHHHHHHHHHHHTCEEC-
T ss_pred HHHHHHHHhCCCEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC------HHHHHHHHHHHHHhcCCEEE-
Confidence 45567999999987631 2222223455666789998766432 35677776666654322111
Q ss_pred HHHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSP--LESLASSAVRTANKA-RAKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l-~A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
.+.. ++ ...-...+.++.+++ ..+.|++.+-+|.|.--++++ +|.+.|+++
T Consensus 152 ----------~~~~-np~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigV 209 (346)
T 3l6b_A 152 ----------HPNQ-EPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAA 209 (346)
T ss_dssp ----------CSSS-CHHHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ----------CCCC-ChHHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 0000 11 122334456777776 589999999999887666544 799999999
No 214
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=58.85 E-value=67 Score=28.90 Aligned_cols=39 Identities=3% Similarity=0.009 Sum_probs=29.3
Q ss_pred hccccCCCCEEEeCCCC----ChhhHHHHHHHHccCCCCceEE
Q 016513 78 RWGVPNNIDMIALSFVR----KGSDLVNVRKVLGPHAKNIQLM 116 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~----sa~dv~~v~~~l~~~~~~~~Ii 116 (388)
+.+.++|.|+|=+..-. +.++++++++.+.+.|-.+..+
T Consensus 28 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 28 EVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp HHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 66778899999887643 4678999999998877554433
No 215
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=58.21 E-value=11 Score=36.17 Aligned_cols=85 Identities=21% Similarity=0.262 Sum_probs=59.1
Q ss_pred CceEEEeecC--------HHhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHh
Q 016513 112 NIQLMSKVEN--------QEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESM 182 (388)
Q Consensus 112 ~~~IiakIEt--------~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM 182 (388)
+++++++.|+ ..-.+.++.++.. ..+|++.|||+- | +.+++.|++.|.|++. |
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~---p--------eelie~A~~~~IPVL~-T------ 110 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP---P--------EELIEAAKEHETPLIT-S------ 110 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC---C--------HHHHHHHHHTTCCEEE-C------
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC---C--------HHHHHHHHHCCCeEEE-E------
Confidence 5667776655 2233455556543 579999999984 2 2378889999999884 3
Q ss_pred hcCCCCChHHHHHHHHHHHc---------------CCceeEeccccCCCC
Q 016513 183 IKSPRPTRAEATDVANAVLD---------------GTDCVMLSGESAAGA 217 (388)
Q Consensus 183 ~~~~~ptraEv~dv~~av~~---------------g~d~i~Ls~eta~G~ 217 (388)
+.+|-.=+..+.+++.. +--++++.|++..||
T Consensus 111 ---~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 111 ---KIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp ---CSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred ---CCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 35555555667777765 225899999999999
No 216
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=58.13 E-value=43 Score=32.24 Aligned_cols=95 Identities=8% Similarity=-0.020 Sum_probs=62.3
Q ss_pred HhccccCCCCEEEe------CCCCChhhHHHHHHHHccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 77 LRWGVPNNIDMIAL------SFVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 77 ~~~~l~~g~d~v~~------sfV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+++.++.|+|+|++ .+.-|.++=+++.+. ..+.++.+|+-+= |.++++....-.+. +|++++-+-.+.
T Consensus 53 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 53 GKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 37888999999986 355566666666665 3345788999884 46677666666555 799998765543
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-..+.+.+...-+.|.++ +.+.|+++.
T Consensus 131 ~~~s~~~l~~~f~~IA~a--a~~lPiilY 157 (344)
T 2hmc_A 131 RGSVIAAQKAHFKAILSA--APEIPAVIY 157 (344)
T ss_dssp STTCHHHHHHHHHHHHHH--STTSCEEEE
T ss_pred CCCCHHHHHHHHHHHHhh--CCCCcEEEE
Confidence 212345555555555432 457898863
No 217
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=57.59 E-value=64 Score=29.93 Aligned_cols=94 Identities=9% Similarity=0.044 Sum_probs=58.6
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHHHccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+++.++.|+|++++. +.-|.++=+++.+...+.... +|+-+= |.++++.....-+. +|++|+-+-.+.
T Consensus 25 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 102 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYF 102 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCC
Confidence 378889999999863 444555555555544333223 888873 46777666666555 799998765543
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-..+.+.+...-+.|. .+.+.|+++.
T Consensus 103 ~~~s~~~l~~~f~~va---~a~~lPiilY 128 (286)
T 2r91_A 103 PRLSERQIAKYFRDLC---SAVSIPVFLY 128 (286)
T ss_dssp TTCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 2124455555555554 4558998873
No 218
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=57.59 E-value=94 Score=29.15 Aligned_cols=128 Identities=13% Similarity=-0.023 Sum_probs=68.7
Q ss_pred ccccCCccccCCCCChhCHHHHHhccccCCCCEEE-eCCCCChhhHHHHHHHHccC-CC--CceEEEee--cCHHhHhhH
Q 016513 55 NVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIA-LSFVRKGSDLVNVRKVLGPH-AK--NIQLMSKV--ENQEGVVNF 128 (388)
Q Consensus 55 ~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~-~sfV~sa~dv~~v~~~l~~~-~~--~~~IiakI--Et~~av~nl 128 (388)
++..|=..-++..++ +.+.. ..+.+.|..+++ .....+++++.+..+.+.+. +. .+.++..- ..+.--+.+
T Consensus 13 ~~~~Pii~apM~gvs--~~~la-~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~ 89 (328)
T 2gjl_A 13 GVEHPIMQGGMQWVG--RAEMA-AAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYR 89 (328)
T ss_dssp TCSSSEEECCCTTTC--SHHHH-HHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHH
T ss_pred CCCCCEEECCCCCCC--cHHHH-HHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHH
Confidence 344443333344444 44555 556677765554 44556677765544433322 11 23344320 022223445
Q ss_pred HHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCcee
Q 016513 129 DDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV 207 (388)
Q Consensus 129 deI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i 207 (388)
+.+++. +|+|.++-|+ | ..+++.++++|+|++... .+. .+...+...|+|++
T Consensus 90 ~~~~~~g~d~V~~~~g~-----p--------~~~~~~l~~~gi~vi~~v-----------~t~---~~a~~~~~~GaD~i 142 (328)
T 2gjl_A 90 AAIIEAGIRVVETAGND-----P--------GEHIAEFRRHGVKVIHKC-----------TAV---RHALKAERLGVDAV 142 (328)
T ss_dssp HHHHHTTCCEEEEEESC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSEE
T ss_pred HHHHhcCCCEEEEcCCC-----c--------HHHHHHHHHcCCCEEeeC-----------CCH---HHHHHHHHcCCCEE
Confidence 555554 7898887442 3 245677788899988421 122 23456788999999
Q ss_pred Eeccc
Q 016513 208 MLSGE 212 (388)
Q Consensus 208 ~Ls~e 212 (388)
.+++=
T Consensus 143 ~v~g~ 147 (328)
T 2gjl_A 143 SIDGF 147 (328)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 99653
No 219
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=57.58 E-value=55 Score=30.53 Aligned_cols=108 Identities=10% Similarity=0.064 Sum_probs=72.8
Q ss_pred CHHHHHhccccCCCCEEEe-----CCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHh---hHHHHHhh-cCceeecC
Q 016513 72 DKEDILRWGVPNNIDMIAL-----SFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVV---NFDDILRE-TDSFMVAR 142 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~-----sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~---nldeI~~~-~Dgi~igr 142 (388)
|...+++...+.|+++|.+ -|-.+.++++++++.. +++|+.|= .+- .+++.... +|+|++.-
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~Kd----fi~d~~qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRKD----FLFDPYQVYEARSWGADCILIIM 150 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEES----CCCSTHHHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEECC----ccCCHHHHHHHHHcCCCEEEEcc
Confidence 5566645566789999987 3558999999998765 46676651 211 24444443 89999987
Q ss_pred CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 143 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 143 gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
.+| +. .--+.++..|+..|.-+++-++ +.. ++..+...|+|.|-.+
T Consensus 151 a~L----~~----~~l~~l~~~a~~lGl~~lvevh-----------~~e---El~~A~~~ga~iIGin 196 (272)
T 3tsm_A 151 ASV----DD----DLAKELEDTAFALGMDALIEVH-----------DEA---EMERALKLSSRLLGVN 196 (272)
T ss_dssp TTS----CH----HHHHHHHHHHHHTTCEEEEEEC-----------SHH---HHHHHTTSCCSEEEEE
T ss_pred ccc----CH----HHHHHHHHHHHHcCCeEEEEeC-----------CHH---HHHHHHhcCCCEEEEC
Confidence 766 22 2346778889999998876442 233 3466778899987665
No 220
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=57.37 E-value=46 Score=31.45 Aligned_cols=117 Identities=13% Similarity=0.134 Sum_probs=70.4
Q ss_pred HHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 016513 159 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLD 238 (388)
Q Consensus 159 k~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~ 238 (388)
..+..+|+..|.++.+.. |..+....+...-..|++.+....+ +. ..++.+...++.++-...++
T Consensus 86 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~-~~~~~~~a~~l~~~~~~~~~ 150 (325)
T 3dwg_A 86 ISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAE---GG-SNTAVATAKELAATNPSWVM 150 (325)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECST---TT-HHHHHHHHHHHHHHCTTSBC
T ss_pred HHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCeEe
Confidence 456677889999987631 2222233445566779998877543 12 24666665555443221111
Q ss_pred hHHHHHHHHhcCCCCCCch---hHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 239 YRAVFKEMIRSTPLPMSPL---ESLASSAVRTANKAR-AKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~---~~ia~aAv~~A~~l~-A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
..+ | .++. .-....+.++.++++ .+.|++.+-+|.|.--++++ .|.+.|+++
T Consensus 151 ~~~-~----------~np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (325)
T 3dwg_A 151 LYQ-Y----------GNPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAA 210 (325)
T ss_dssp CCT-T----------TCHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCC-C----------CCHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 100 0 1221 122445667777774 89999999999987665554 799999999
No 221
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=57.35 E-value=1.9e+02 Score=30.20 Aligned_cols=77 Identities=16% Similarity=0.271 Sum_probs=50.0
Q ss_pred eCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCc-------------------cccCCCCChhCHHHHHhcccc
Q 016513 22 ADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGV-------------------VVDLPTLTEKDKEDILRWGVP 82 (388)
Q Consensus 22 ddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~-------------------~~~~~~lt~~D~~di~~~~l~ 82 (388)
+++.+..+|. .+..+. .+=|.-.++..+++|.. .+++.. +..|...+.++.-+
T Consensus 159 ~~~~v~~~V~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr-~a~Dv~~~r~~l~~ 230 (606)
T 3t05_A 159 AKKEVKCDIL----NSGELK---NKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVR-RPSDVLEIREILEE 230 (606)
T ss_dssp TTTEEEEEEC----SCCEEE---TTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCC-SHHHHHHHHHHHHH
T ss_pred cCCEEEEEEE----ECeEEe---CCceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHh
Confidence 4567777775 233332 34566677777888742 122222 45677777333335
Q ss_pred CCCCEEEeCCCCChhhHHHHHHHH
Q 016513 83 NNIDMIALSFVRKGSDLVNVRKVL 106 (388)
Q Consensus 83 ~g~d~v~~sfV~sa~dv~~v~~~l 106 (388)
.|.+.-+++++++++-++.+.+++
T Consensus 231 ~~~~i~IiaKIE~~eav~nldeIl 254 (606)
T 3t05_A 231 QKANISVFPKIENQEGIDNIEEIL 254 (606)
T ss_dssp TTCCCEEEECCCSHHHHHTHHHHH
T ss_pred cCCCCeEEEEeCCHHHHHhHHHHH
Confidence 677888999999999999988886
No 222
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=57.34 E-value=1.1e+02 Score=29.50 Aligned_cols=98 Identities=13% Similarity=0.311 Sum_probs=69.3
Q ss_pred ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEE
Q 016513 95 KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV 173 (388)
Q Consensus 95 sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi 173 (388)
+.++.+.++++..+.| +.+++-+=..++++-+++ . +|.+=||.+|+- .++ +++++.+.|||++
T Consensus 89 ~~e~~~~L~~~~~~~G--i~~~st~~d~~svd~l~~---~~v~~~KI~S~~~~------n~~-----LL~~va~~gkPvi 152 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKG--MIFISTLFSRAAALRLQR---MDIPAYKIGSGECN------NYP-----LIKLVASFGKPII 152 (349)
T ss_dssp CHHHHHHHHHHHHHTT--CEEEEEECSHHHHHHHHH---HTCSCEEECGGGTT------CHH-----HHHHHHTTCSCEE
T ss_pred CHHHHHHHHHHHHHhC--CeEEEeeCCHHHHHHHHh---cCCCEEEECccccc------CHH-----HHHHHHhcCCeEE
Confidence 4567777888877654 778887767777766555 4 699999988873 222 3556667899999
Q ss_pred EhhhHHHHhhcCCCCChHHHHHHHHHHH-cCCceeEeccccCCCCCHH
Q 016513 174 TATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGESAAGAYPE 220 (388)
Q Consensus 174 ~atq~lesM~~~~~ptraEv~dv~~av~-~g~d~i~Ls~eta~G~~P~ 220 (388)
+.|.| -|..|+...++++. .|.+.++|- -+-.||.
T Consensus 153 LstGm---------at~~Ei~~Ave~i~~~G~~iiLlh---c~s~Yp~ 188 (349)
T 2wqp_A 153 LSTGM---------NSIESIKKSVEIIREAGVPYALLH---CTNIYPT 188 (349)
T ss_dssp EECTT---------CCHHHHHHHHHHHHHHTCCEEEEE---CCCCSSC
T ss_pred EECCC---------CCHHHHHHHHHHHHHcCCCEEEEe---ccCCCCC
Confidence 98874 36789988888876 466777773 2445774
No 223
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=57.18 E-value=39 Score=32.64 Aligned_cols=149 Identities=12% Similarity=0.061 Sum_probs=77.0
Q ss_pred ChhCHHHHHhccccCCCC-EEEeCCC-----------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh--
Q 016513 69 TEKDKEDILRWGVPNNID-MIALSFV-----------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-- 134 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d-~v~~sfV-----------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-- 134 (388)
+..|....++..-+.|+| +|-+.+- ++++.+.++.+.+.+. .+.+|+.||=--.....+.++++.
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~~~~~~a~~~~~ag 217 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYFDIVHFDQAAAIFN 217 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHhC
Confidence 444544443334346776 7776553 4566666666666544 357899999432223333344433
Q ss_pred cCcee-------------ecCCccc----CCC----ChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChH
Q 016513 135 TDSFM-------------VARGDLG----MEI----PVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRA 191 (388)
Q Consensus 135 ~Dgi~-------------igrgDLg----~e~----~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptra 191 (388)
+|++- +.+.-.. .+. |....+...+.+-+..++. ..|+|....+-
T Consensus 218 a~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~------------ 285 (345)
T 3oix_A 218 XYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVX------------ 285 (345)
T ss_dssp TSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC------------
T ss_pred CCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCC------------
Confidence 35542 1111110 011 1122334444444444444 47888654432
Q ss_pred HHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhc
Q 016513 192 EATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 192 Ev~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
...|+..++..|+|+|++..--..+. | .+..+|.++.+.
T Consensus 286 s~~da~~~l~aGAd~V~igra~~~~g-P----~~~~~i~~~L~~ 324 (345)
T 3oix_A 286 TGRDAFEHILCGASMVQIGTALHQEG-P----QIFKRITKELXA 324 (345)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHHHC-T----HHHHHHHHHHHH
T ss_pred ChHHHHHHHHhCCCEEEEChHHHhcC-h----HHHHHHHHHHHH
Confidence 23577888899999999975422221 3 345556555443
No 224
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=57.17 E-value=1.2e+02 Score=29.22 Aligned_cols=122 Identities=13% Similarity=0.107 Sum_probs=65.7
Q ss_pred CCChhCHHHH-------HhccccCCCCEEEe-------------CCCCChhh----------------HHHHHHHHccCC
Q 016513 67 TLTEKDKEDI-------LRWGVPNNIDMIAL-------------SFVRKGSD----------------LVNVRKVLGPHA 110 (388)
Q Consensus 67 ~lt~~D~~di-------~~~~l~~g~d~v~~-------------sfV~sa~d----------------v~~v~~~l~~~~ 110 (388)
.+|..|+..+ ++.+.++|+|+|=+ |..+...| ++++|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEW---S 226 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHS---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhc---C
Confidence 3566665554 24667899999987 55454444 44444444 3
Q ss_pred CCceEEEeecCH---H-------hHhhHHHHHhh-----cCceeecCCcccCCCChhhHHHHHHHHHHH-HHHcCCCEEE
Q 016513 111 KNIQLMSKVENQ---E-------GVVNFDDILRE-----TDSFMVARGDLGMEIPVEKIFLAQKMMIYK-CNLVGKPVVT 174 (388)
Q Consensus 111 ~~~~IiakIEt~---~-------av~nldeI~~~-----~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~-c~~~gkpvi~ 174 (388)
.+ .|..||-.- . .++..-++++. .|.|-+..+..... +...+ ..++. .+..++|++.
T Consensus 227 ~~-~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~~-----~~~~~v~~~~~iPvi~ 299 (364)
T 1vyr_A 227 AD-RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYSE-----AFRQKVRERFHGVIIG 299 (364)
T ss_dssp GG-GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCCH-----HHHHHHHHHCCSEEEE
T ss_pred CC-cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-CcccH-----HHHHHHHHHCCCCEEE
Confidence 34 677777321 1 22333333332 57777664432111 11111 12222 3345889887
Q ss_pred hhhHHHHhhcCCCCChHHHHHHHHHHHcC-CceeEecc
Q 016513 175 ATQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLSG 211 (388)
Q Consensus 175 atq~lesM~~~~~ptraEv~dv~~av~~g-~d~i~Ls~ 211 (388)
... . |+ .+...++..| +|+|++..
T Consensus 300 ~Gg---------i-t~---~~a~~~l~~g~aD~V~~gR 324 (364)
T 1vyr_A 300 AGA---------Y-TA---EKAEDLIGKGLIDAVAFGR 324 (364)
T ss_dssp ESS---------C-CH---HHHHHHHHTTSCSEEEESH
T ss_pred ECC---------c-CH---HHHHHHHHCCCccEEEECH
Confidence 543 2 32 3456778888 99999963
No 225
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=57.07 E-value=62 Score=31.02 Aligned_cols=149 Identities=13% Similarity=0.170 Sum_probs=85.2
Q ss_pred hhCHHHHHhccccCCCC--EEEeCCCCChhhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhhc----CceeecC
Q 016513 70 EKDKEDILRWGVPNNID--MIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRET----DSFMVAR 142 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d--~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~~----Dgi~igr 142 (388)
..+.+-+ +.+++.|++ .++-|.-.. ...++-..+.+.| ..++++ ....+-++.+-+.+... +-|++.|
T Consensus 141 T~~~eV~-eaAleagag~~~lINsv~~~--~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDP 215 (323)
T 4djd_D 141 EKDHEVL-EAVAEAAAGENLLLGNAEQE--NYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDHIVIDP 215 (323)
T ss_dssp HHHHHHH-HHHHHHTTTSCCEEEEEBTT--BCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred CCCHHHH-HHHHHhcCCCCCeEEECCcc--cHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeC
Confidence 3466777 889988876 233333222 1233434444443 344443 22333333443333332 5688888
Q ss_pred CcccCCCChhhHHHHHHHHHHHH----HHcCCCEEEhhhHHHHhhcC-------------CCCChH---HHHHHHHHHHc
Q 016513 143 GDLGMEIPVEKIFLAQKMMIYKC----NLVGKPVVTATQMLESMIKS-------------PRPTRA---EATDVANAVLD 202 (388)
Q Consensus 143 gDLg~e~~~~~v~~~qk~ii~~c----~~~gkpvi~atq~lesM~~~-------------~~ptra---Ev~dv~~av~~ 202 (388)
|=....-+.+.-....+++=..+ +..|-|+++..- -+||+.. +...|. |+.--...+..
T Consensus 216 g~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvS-rksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~ 294 (323)
T 4djd_D 216 SIGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVG-YEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQA 294 (323)
T ss_dssp CCCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHH-HHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecc-hhhhhhccccccccccccccccchhhHHHHHHHHHHHHHh
Confidence 87655566676666666665433 368999987531 2344433 122233 33444567889
Q ss_pred CCceeEeccccCCCCCHHHHHHHHHHHHHH
Q 016513 203 GTDCVMLSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 203 g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
|+|.++| ++| ++|+++++++.+
T Consensus 295 ~~~i~v~-------~~p-~~~~~~~~~~~~ 316 (323)
T 4djd_D 295 GAHILLM-------RHP-EAVARVKENIDQ 316 (323)
T ss_dssp TCSEEEE-------CCH-HHHHHHHHHHHH
T ss_pred cCCEEEE-------cCH-HHHHHHHHHHHH
Confidence 9999999 467 789998888754
No 226
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=56.47 E-value=35 Score=30.77 Aligned_cols=105 Identities=12% Similarity=0.120 Sum_probs=59.5
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee------c-------CHHhHhhHHHHHhhcCc
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV------E-------NQEGVVNFDDILRETDS 137 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI------E-------t~~av~nldeI~~~~Dg 137 (388)
.|...+++.+.+.|++.++.+- .+.++.+.+.++..+.+.++....-+ . +.+.++.+.+.+.....
T Consensus 20 ~~~~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 98 (272)
T 2y1h_A 20 RDLDDVLEKAKKANVVALVAVA-EHSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKD 98 (272)
T ss_dssp TTHHHHHHHHHHTTEEEEEECC-SSGGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHGG
T ss_pred cCHHHHHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCCC
Confidence 3555554778889999887764 34677777777665443222211111 1 22344444444432212
Q ss_pred eeecCCcccCCCC--h--h-hHHHHH----HHHHHHHHHcCCCEEEhh
Q 016513 138 FMVARGDLGMEIP--V--E-KIFLAQ----KMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 138 i~igrgDLg~e~~--~--~-~v~~~q----k~ii~~c~~~gkpvi~at 176 (388)
-.+|=|..|.+.. . . .....| +..++.|++.|+|+++-|
T Consensus 99 ~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~ 146 (272)
T 2y1h_A 99 RLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHS 146 (272)
T ss_dssp GCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 2345577777762 1 1 123344 467888999999999865
No 227
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=56.37 E-value=12 Score=35.05 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=27.5
Q ss_pred HHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHH
Q 016513 194 TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 231 (388)
Q Consensus 194 ~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~ 231 (388)
.|+..+...|+|++++..---....|.++++.+.+.+.
T Consensus 222 e~i~~~~~aGadgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 222 ADAALMMHLGMDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp HHHHHHHHTTCSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 56777788899999997443333568888888776654
No 228
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=56.08 E-value=70 Score=29.83 Aligned_cols=94 Identities=7% Similarity=-0.063 Sum_probs=58.6
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHHHccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+++.++.|+|++++. +.-|.++=+++.+...+.... +|+-+= |.++++.....-+. +|++|+-+-.+.
T Consensus 26 v~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 103 (293)
T 1w3i_A 26 AENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYY 103 (293)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 378889999999863 445555666665555444333 888873 46666655555544 799988755443
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-..+.+.+...-+.|. .+.+.|+++.
T Consensus 104 ~~~s~~~l~~~f~~va---~a~~lPiilY 129 (293)
T 1w3i_A 104 PRMSEKHLVKYFKTLC---EVSPHPVYLY 129 (293)
T ss_dssp SSCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCCHHHHHHHHHHHH---hhCCCCEEEE
Confidence 2124455655556654 4558998873
No 229
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=55.86 E-value=43 Score=31.26 Aligned_cols=103 Identities=11% Similarity=0.070 Sum_probs=61.0
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCC-CceEEEee---------cCHHhHhhHHHHHhhcCceee
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAK-NIQLMSKV---------ENQEGVVNFDDILRETDSFMV 140 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~-~~~IiakI---------Et~~av~nldeI~~~~Dgi~i 140 (388)
.|...+++.+.+.|++.++++- .+.++.+.+.++..+... ...+++-+ .+.+-++.+++.++....+
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vv-- 93 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVR-- 93 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEE--
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeE--
Confidence 4667666889999999988874 467777777776654321 12233333 1223345555555433334
Q ss_pred cCCcccCCCCh-----hhHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 141 ARGDLGMEIPV-----EKIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 141 grgDLg~e~~~-----~~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
|=|..|.+... +.=..+-++.++.|++.|+|+++-+
T Consensus 94 aIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~ 134 (287)
T 3rcm_A 94 AVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHE 134 (287)
T ss_dssp EEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 44566655532 1112233577888999999999855
No 230
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=55.76 E-value=22 Score=33.32 Aligned_cols=94 Identities=10% Similarity=0.078 Sum_probs=58.1
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|++++. +.-|.++=+++.+. ....+.++++|+-+= |.++++.....-+. +|++++-+-.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 28 IDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 378889999999863 34455555554444 344456788999884 35556555554443 79998875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.- .+.+.+...-+.|. .+.+.|+++
T Consensus 108 ~~-~s~~~l~~~f~~ia---~a~~lPiil 132 (292)
T 2ojp_A 108 NR-PSQEGLYQHFKAIA---EHTDLPQIL 132 (292)
T ss_dssp SC-CCHHHHHHHHHHHH---TTCSSCEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhcCCCEEE
Confidence 22 24455555555553 445789886
No 231
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=55.71 E-value=26 Score=28.59 Aligned_cols=41 Identities=22% Similarity=0.292 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|++.+++.||+-++ -|+++..+.+.- +|||+.+
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv 157 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVV 157 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEE
Confidence 5666678889999999999886 377899998886 5999999
No 232
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=55.40 E-value=31 Score=32.69 Aligned_cols=94 Identities=10% Similarity=0.076 Sum_probs=60.1
Q ss_pred hccccCCCCEEEeCC------CCChhhHHHHHH-HHccCCCCceEEEee---cCHHhHhhHHHHHhh-c-CceeecCCcc
Q 016513 78 RWGVPNNIDMIALSF------VRKGSDLVNVRK-VLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-T-DSFMVARGDL 145 (388)
Q Consensus 78 ~~~l~~g~d~v~~sf------V~sa~dv~~v~~-~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~-Dgi~igrgDL 145 (388)
++.++.|+|++++.= .-|.++=+++.+ .....+.++.+|+-+ -|.++++.....-+. . |++|+-+-.+
T Consensus 35 ~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y 114 (311)
T 3h5d_A 35 EHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYY 114 (311)
T ss_dssp HHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCC
Confidence 788899999987642 223444444444 344556678999988 366777777776665 4 9999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 115 ~~-~s~~~l~~~f~~va---~a~~lPiilY 140 (311)
T 3h5d_A 115 NK-PSQEGMYQHFKAIA---DASDLPIIIY 140 (311)
T ss_dssp SC-CCHHHHHHHHHHHH---HSCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HhCCCCEEEE
Confidence 22 23345555555554 4458999874
No 233
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=55.28 E-value=83 Score=29.09 Aligned_cols=115 Identities=15% Similarity=0.106 Sum_probs=70.1
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+.. |.......+...-..|++.+...++. .| .++.+...++.++ +..++-
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~---~~-~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER---RM-LAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT---HH-HHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHhc-CCCEeC
Confidence 35667889999987631 22222334556666799988765431 12 4566665555544 222110
Q ss_pred HHHHHHHHhcCCCCCCch--hH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPL--ES-LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~~-ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
. + -.++. .. ....+.++.++++ .+.|++.+-+|.++.-++++ .|...|+++
T Consensus 140 ~----------~-~~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~v 199 (304)
T 1ve1_A 140 D----------Q-FKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAV 199 (304)
T ss_dssp C----------T-TTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEE
T ss_pred C----------C-CCChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEE
Confidence 0 0 01222 12 2334678888875 79999999999998766653 689999999
No 234
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=53.92 E-value=21 Score=28.63 Aligned_cols=41 Identities=34% Similarity=0.494 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTRG--------GTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~s--------G~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|++.+++.||+-++. |.++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 145 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAV 145 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEE
Confidence 45666778889999998888752 677888888775 999998
No 235
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=53.79 E-value=65 Score=30.15 Aligned_cols=92 Identities=11% Similarity=0.061 Sum_probs=56.3
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHH-HHHHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATD-VANAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~d-v~~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.++.+..|++..+ ...+-.|.-+ ...|-..|+|++|+..=
T Consensus 42 v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 42 IDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp CCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 6898874 21122344455555555555555543357888754 2333445544 44577789999999754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhc
Q 016513 213 SAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
--..--+.+.++..+.|+..++-
T Consensus 113 ~y~~~s~~~l~~~f~~va~a~~l 135 (301)
T 3m5v_A 113 YYNKPTQQGLYEHYKAIAQSVDI 135 (301)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCCCCHHHHHHHHHHHHHhCCC
Confidence 43333456788888888887753
No 236
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=53.78 E-value=1.3e+02 Score=28.22 Aligned_cols=130 Identities=13% Similarity=0.101 Sum_probs=75.1
Q ss_pred CChhCHHHHHhccccCCCCEEEeCC-------------CCChhhHHHHHHHHccCCCCceEEEeecC-------HHhHhh
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSF-------------VRKGSDLVNVRKVLGPHAKNIQLMSKVEN-------QEGVVN 127 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sf-------------V~sa~dv~~v~~~l~~~~~~~~IiakIEt-------~~av~n 127 (388)
+|.+|..-- +.+-+.|+|.|.+.. --+.+|+..-.+.+.+..+...|++=++- .++++|
T Consensus 22 ~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 100 (275)
T 1o66_A 22 LTAYESSFA-ALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAA 100 (275)
T ss_dssp EECCSHHHH-HHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHH
T ss_pred EeCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHH
Confidence 355676666 667788999997742 12345555444444444455677777662 467888
Q ss_pred HHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEE----EhhhHH---HHhhcCCCCCh-HHH-HHHH
Q 016513 128 FDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV----TATQML---ESMIKSPRPTR-AEA-TDVA 197 (388)
Q Consensus 128 ldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi----~atq~l---esM~~~~~ptr-aEv-~dv~ 197 (388)
...+++. +++|-+-=|+ -+-..|+++.++|+||+ +--|-. .......+..+ .|+ .|..
T Consensus 101 a~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~ 168 (275)
T 1o66_A 101 AAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAK 168 (275)
T ss_dssp HHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHH
Confidence 8888885 6888774341 23345666678999986 222211 11111112122 222 4666
Q ss_pred HHHHcCCceeEec
Q 016513 198 NAVLDGTDCVMLS 210 (388)
Q Consensus 198 ~av~~g~d~i~Ls 210 (388)
.....|+|+++|-
T Consensus 169 a~~eAGA~~ivlE 181 (275)
T 1o66_A 169 AHDDAGAAVVLME 181 (275)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHcCCcEEEEe
Confidence 6778899999984
No 237
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=53.73 E-value=23 Score=33.36 Aligned_cols=95 Identities=9% Similarity=0.013 Sum_probs=60.2
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|+|++. +.-|.++=+++.+. ....+.++.+|+-+ -|.++++......+. +|++++-+-.+
T Consensus 31 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (300)
T 3eb2_A 31 CDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAY 110 (300)
T ss_dssp HHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCS
T ss_pred HHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 378889999999643 22344444444443 34446678888877 467777777666665 89999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.- .+.+.+...-+.|. .+.+.|+++.
T Consensus 111 ~~-~~~~~l~~~f~~va---~a~~lPiilY 136 (300)
T 3eb2_A 111 FP-LKDAQIESYFRAIA---DAVEIPVVIY 136 (300)
T ss_dssp SC-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CC-CCHHHHHHHHHHHH---HHCCCCEEEE
Confidence 32 24455555555554 4457999873
No 238
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=53.56 E-value=23 Score=34.08 Aligned_cols=125 Identities=14% Similarity=0.122 Sum_probs=62.3
Q ss_pred hCHHHHHhccccCCCCEEEeCCC----------------CChhhHHHHHHHHccCCCCceEEEeecC-------H-HhHh
Q 016513 71 KDKEDILRWGVPNNIDMIALSFV----------------RKGSDLVNVRKVLGPHAKNIQLMSKVEN-------Q-EGVV 126 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV----------------~sa~dv~~v~~~l~~~~~~~~IiakIEt-------~-~av~ 126 (388)
.+....++.+.+.|+|+|-+.+- ++++.+.++.+.+.+.- ++.+..|+-. . +.++
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~ 148 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQ 148 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHH
Confidence 34444436777889999887652 33444555555554322 4678888731 1 1222
Q ss_pred hHHHHHhh-cCceeecCCcc--cCCCChh--hHHHHHHHHHHHHH-Hc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHH
Q 016513 127 NFDDILRE-TDSFMVARGDL--GMEIPVE--KIFLAQKMMIYKCN-LV-GKPVVTATQMLESMIKSPRPTRAEATDVANA 199 (388)
Q Consensus 127 nldeI~~~-~Dgi~igrgDL--g~e~~~~--~v~~~qk~ii~~c~-~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~a 199 (388)
-+..+.+. +|+|.+-.+.- +.. |.. ..+...-..+...+ .. +.|+|....+ -|.. |+..+
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI---------~s~e---da~~~ 215 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTNGGI---------RSLE---EALFH 215 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSC---------CSHH---HHHHH
T ss_pred HHHHHHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEECCc---------CCHH---HHHHH
Confidence 22233333 68888864321 111 100 00001112233333 34 7899875542 3333 44445
Q ss_pred HHcCCceeEec
Q 016513 200 VLDGTDCVMLS 210 (388)
Q Consensus 200 v~~g~d~i~Ls 210 (388)
+. |+|++|+.
T Consensus 216 l~-GaD~V~iG 225 (350)
T 3b0p_A 216 LK-RVDGVMLG 225 (350)
T ss_dssp HT-TSSEEEEC
T ss_pred Hh-CCCEEEEC
Confidence 54 99999996
No 239
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=52.98 E-value=64 Score=28.47 Aligned_cols=111 Identities=10% Similarity=0.047 Sum_probs=64.8
Q ss_pred CChh--CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEe-----------ecCHHhHhhHHHHHhh
Q 016513 68 LTEK--DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK-----------VENQEGVVNFDDILRE 134 (388)
Q Consensus 68 lt~~--D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak-----------IEt~~av~nldeI~~~ 134 (388)
.++. +...+++.+.+.|++++.+ ++++.++.+++.. +.+++.- |+. -.+.+++.++.
T Consensus 31 ~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~~~ 100 (234)
T 1yxy_A 31 YSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLAAL 100 (234)
T ss_dssp CCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHHTT
T ss_pred cCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHHHc
Confidence 3445 5555546777899999876 4788888888764 2344321 222 23455666555
Q ss_pred -cCceeecCCcccCCCChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCcee
Q 016513 135 -TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV 207 (388)
Q Consensus 135 -~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i 207 (388)
+|.|.++-.-+.-.-+ +.+ .++++.+++. +++++.-. -|.. +...+...|+|.+
T Consensus 101 Gad~V~l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~-----------~t~~---ea~~a~~~Gad~i 157 (234)
T 1yxy_A 101 NIAVIAMDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADI-----------STFD---EGLVAHQAGIDFV 157 (234)
T ss_dssp TCSEEEEECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEEC-----------SSHH---HHHHHHHTTCSEE
T ss_pred CCCEEEEcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeC-----------CCHH---HHHHHHHcCCCEE
Confidence 7888776332210000 112 4567777776 77776522 1222 3567888999999
No 240
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=52.85 E-value=48 Score=31.46 Aligned_cols=117 Identities=11% Similarity=0.093 Sum_probs=70.5
Q ss_pred HHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccc
Q 016513 159 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLD 238 (388)
Q Consensus 159 k~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~ 238 (388)
..+..+|+..|.++.+. .|..+....+...-..|++.+....+. .| .++++...++.++-+..++
T Consensus 85 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~ 149 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---GM-KGAVAMAKKIVAANPNAVL 149 (334)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---Cc-hHHHHHHHHHHHhCCCEEE
Confidence 35667788899998763 133233344566678899988876542 12 3555555555433211111
Q ss_pred hHHHHHHHHhcCCCCCCch---hHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 239 YRAVFKEMIRSTPLPMSPL---ESLASSAVRTANKA--RAKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~---~~ia~aAv~~A~~l--~A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
- .+. .++. .-....+.++.+++ ..+.|++.+-+|.|.--++++ +|...|+++
T Consensus 150 i----------~~~-~np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigV 210 (334)
T 3tbh_A 150 A----------DQF-ATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAV 210 (334)
T ss_dssp C----------CTT-TCHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred C----------Ccc-CChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEE
Confidence 1 000 1121 11234566777776 479999999999987665554 799999999
No 241
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=52.75 E-value=42 Score=32.39 Aligned_cols=128 Identities=18% Similarity=0.135 Sum_probs=67.3
Q ss_pred CCChhCHHHHH-------hccccCCCCEEEeCC-------------CCChhh------------HHHHHHHHcc-CCCCc
Q 016513 67 TLTEKDKEDIL-------RWGVPNNIDMIALSF-------------VRKGSD------------LVNVRKVLGP-HAKNI 113 (388)
Q Consensus 67 ~lt~~D~~di~-------~~~l~~g~d~v~~sf-------------V~sa~d------------v~~v~~~l~~-~~~~~ 113 (388)
.+|..|++.++ +.+.+.|+|+|=+.. .+...| +.++.+.+.+ .+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 47777777663 567789999987643 222222 2333333333 35677
Q ss_pred eEEEeecC---H----HhHhhHHHHHhh-----cCceeecCCcccCC--C--Chh-hHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 114 QLMSKVEN---Q----EGVVNFDDILRE-----TDSFMVARGDLGME--I--PVE-KIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 114 ~IiakIEt---~----~av~nldeI~~~-----~Dgi~igrgDLg~e--~--~~~-~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
.|..||-- . ..++...++++. .|.|-+.-|...-. . +.. .+. ..+.+- +..+.|++...
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~-~~~~ir---~~~~iPVi~~G 302 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGP-IAERVR---REAKLPVTSAW 302 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHH-HHHHHH---HHHTCCEEECS
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHH-HHHHHH---HHcCCcEEEeC
Confidence 78888821 1 123333333332 57777764433211 1 111 121 112222 22479998754
Q ss_pred hHHHHhhcCCCCChHHHHHHHHHHHcC-CceeEec
Q 016513 177 QMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 210 (388)
Q Consensus 177 q~lesM~~~~~ptraEv~dv~~av~~g-~d~i~Ls 210 (388)
.+- |. .+...++..| +|+|++.
T Consensus 303 gI~---------s~---e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 303 GFG---------TP---QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp STT---------SH---HHHHHHHHTTSCSEEECC
T ss_pred CCC---------CH---HHHHHHHHCCCccEEEec
Confidence 321 22 3445678888 9999986
No 242
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=52.47 E-value=1.1e+02 Score=29.53 Aligned_cols=113 Identities=17% Similarity=0.254 Sum_probs=68.0
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
+..+|+..|.++.+. .|..+....+...-..|++.+...+ .| .++.+...++.++.+..++.
T Consensus 108 lA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~a~~~a~~l~~~~~~~~~v- 169 (372)
T 1p5j_A 108 AAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----LL-DEAFELAKALAKNNPGWVYI- 169 (372)
T ss_dssp HHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----CH-HHHHHHHHHHHHHSTTEEEC-
T ss_pred HHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHhcCCcEEe-
Confidence 456788999998763 2222223455566677998775532 23 45666655555432221111
Q ss_pred HHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----C-CCCcEEEE
Q 016513 241 AVFKEMIRSTPLPMSP--LESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----R-PAVPILSV 301 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----R-P~~pIiav 301 (388)
.+.. ++ ...-...+.++.++++ .+.|++.+-+|.|+.-++++ . |...|+++
T Consensus 170 ---------~~~~-n~~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigV 229 (372)
T 1p5j_A 170 ---------PPFD-DPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAM 229 (372)
T ss_dssp ---------CSSC-CHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred ---------CCCC-CHHHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEE
Confidence 0111 22 1223345677777774 68999999999998766543 3 88999999
No 243
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=52.26 E-value=1.7e+02 Score=28.28 Aligned_cols=133 Identities=13% Similarity=0.125 Sum_probs=73.2
Q ss_pred ecCCCccccCCccccCCCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee-cCHHhHhhH
Q 016513 50 LGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNF 128 (388)
Q Consensus 50 l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nl 128 (388)
|....++++|=..-.+..+++.+... ..+..-|.-++. .-.+.++..+..+.+++.+ ...+-+-+ -+....+.+
T Consensus 39 lt~~~~l~~Pii~apM~~vs~~~lA~--avA~aGGlg~i~--~~~s~e~~~~~i~~vk~~~-~l~vga~vg~~~~~~~~~ 113 (366)
T 4fo4_A 39 LTKNIALNIPMVSASMDTVTEARLAI--ALAQEGGIGFIH--KNMSIEQQAAQVHQVKISG-GLRVGAAVGAAPGNEERV 113 (366)
T ss_dssp EETTEEESSSEEECCCTTTCSHHHHH--HHHHTTCEEEEC--SSSCHHHHHHHHHHHHTTT-SCCCEEECCSCTTCHHHH
T ss_pred cccccccCCCEEeCCCCCCChHHHHH--HHHHcCCceEee--cCCCHHHHHHHHHHHHhcC-ceeEEEEeccChhHHHHH
Confidence 44556788885555677777653332 233344444333 2356666555555554432 23344433 234456777
Q ss_pred HHHHhh-cCceeec--CCcccCCCChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcC
Q 016513 129 DDILRE-TDSFMVA--RGDLGMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 203 (388)
Q Consensus 129 deI~~~-~Dgi~ig--rgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g 203 (388)
+.+++. +|.|.|. .|+ .+ -+...++.++++ +.|++..+ ..|..+ ...+...|
T Consensus 114 ~~lieaGvd~I~idta~G~------~~----~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~---A~~a~~aG 170 (366)
T 4fo4_A 114 KALVEAGVDVLLIDSSHGH------SE----GVLQRIRETRAAYPHLEIIGGN----------VATAEG---ARALIEAG 170 (366)
T ss_dssp HHHHHTTCSEEEEECSCTT------SH----HHHHHHHHHHHHCTTCEEEEEE----------ECSHHH---HHHHHHHT
T ss_pred HHHHhCCCCEEEEeCCCCC------CH----HHHHHHHHHHHhcCCCceEeee----------eCCHHH---HHHHHHcC
Confidence 888876 7888873 221 12 223345555555 77876532 233443 35567779
Q ss_pred CceeEec
Q 016513 204 TDCVMLS 210 (388)
Q Consensus 204 ~d~i~Ls 210 (388)
+|++.++
T Consensus 171 AD~I~vG 177 (366)
T 4fo4_A 171 VSAVKVG 177 (366)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9999994
No 244
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=52.07 E-value=1.6e+02 Score=27.75 Aligned_cols=127 Identities=13% Similarity=0.025 Sum_probs=71.2
Q ss_pred CccccCCccccCCCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEe--ecCHHhHhhHHHH
Q 016513 54 KNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDI 131 (388)
Q Consensus 54 k~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI 131 (388)
.++..|=..-++..++ +.+.. ..+.+.|.-+++.+---+++++.+..+.+.+.-.. .+... +-++.--+.++.+
T Consensus 23 l~~~~Pii~apM~gvs--~~~la-~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~-p~gVnl~~~~~~~~~~~~~~ 98 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAG--TPTLA-AAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDK-PFGVNIILVSPWADDLVKVC 98 (326)
T ss_dssp HTCSSSEEECCCTTTS--CHHHH-HHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSS-CEEEEEETTSTTHHHHHHHH
T ss_pred cCCCCCEEECCCCCCC--CHHHH-HHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCC-CEEEEEeccCCCHHHHHHHH
Confidence 4555664433444444 44555 55667787666655444777766655555443221 22222 2233333344444
Q ss_pred Hhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 132 LRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 132 ~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
++. +|.|.++-|+ | ..+++.+++.|.+++... .+. .+...+...|+|++.++
T Consensus 99 ~~~g~d~V~l~~g~-----p--------~~~~~~l~~~g~~v~~~v-----------~s~---~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 99 IEEKVPVVTFGAGN-----P--------TKYIRELKENGTKVIPVV-----------ASD---SLARMVERAGADAVIAE 151 (326)
T ss_dssp HHTTCSEEEEESSC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEE
T ss_pred HHCCCCEEEECCCC-----c--------HHHHHHHHHcCCcEEEEc-----------CCH---HHHHHHHHcCCCEEEEE
Confidence 444 6888887553 3 134566778899988621 222 23455778899999996
Q ss_pred c
Q 016513 211 G 211 (388)
Q Consensus 211 ~ 211 (388)
+
T Consensus 152 g 152 (326)
T 3bo9_A 152 G 152 (326)
T ss_dssp C
T ss_pred C
Confidence 5
No 245
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=52.04 E-value=90 Score=31.93 Aligned_cols=77 Identities=18% Similarity=0.242 Sum_probs=47.9
Q ss_pred EeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCcc--------------------ccCCCCChhCHHHHHhcc
Q 016513 21 CADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV--------------------VDLPTLTEKDKEDILRWG 80 (388)
Q Consensus 21 iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~--------------------~~~~~lt~~D~~di~~~~ 80 (388)
++++.+..+|. .+..+ -.+=|.-.++..+++|... ++... +..|...+ +..
T Consensus 181 ~~~~~v~~~V~----~gG~L---~~~KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr-~a~Dv~~~-r~~ 251 (520)
T 3khd_A 181 THEDHVITEVL----NSAVI---GERKNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQ-SADDVRLI-RNL 251 (520)
T ss_dssp ECSSCEEEEEC----C-CCC---CSSCEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCC-SHHHHHHH-HHH
T ss_pred EECCEEEEEEE----eCeEE---eCCceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCC-CHHHHHHH-HHH
Confidence 45677877776 23233 1244555666667777421 12222 45666666 433
Q ss_pred c-cCCCCEEEeCCCCChhhHHHHHHHH
Q 016513 81 V-PNNIDMIALSFVRKGSDLVNVRKVL 106 (388)
Q Consensus 81 l-~~g~d~v~~sfV~sa~dv~~v~~~l 106 (388)
+ +.|.+.-+++++++++-++.+.+++
T Consensus 252 l~~~g~~i~IIAKIE~~eav~nldeIl 278 (520)
T 3khd_A 252 LGPRGRHIKIIPKIENIEGIIHFDKIL 278 (520)
T ss_dssp HTTTTTTSEEEEEECSHHHHHTHHHHH
T ss_pred HHhcCCCCcEEEEECCHHHHHhHHHHH
Confidence 3 4566777889999999999998886
No 246
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=52.02 E-value=1.8e+02 Score=28.38 Aligned_cols=136 Identities=9% Similarity=0.083 Sum_probs=88.5
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee-cCH-HhHhhHHHHHhhcCceeecCCcccCCCChhhHH
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV-ENQ-EGVVNFDDILRETDSFMVARGDLGMEIPVEKIF 155 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI-Et~-~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~ 155 (388)
....+.|+|.|=+.. .+.++++.++.+-.. -+++++|=| -+. .++. .+-.-+|.+=|.||.+|- .++
T Consensus 53 ~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a~e~G~dklRINPGNig~---~~~-- 121 (366)
T 3noy_A 53 KRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---SMEKGVHGIRINPGNIGK---EEI-- 121 (366)
T ss_dssp HHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---HHHTTCSEEEECHHHHSC---HHH--
T ss_pred HHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---HHHhCCCeEEECCcccCc---hhH--
Confidence 556689999988875 456667666665544 368999987 333 3332 333338999999999984 233
Q ss_pred HHHHHHHHHHHHcCCCEEE-------hhhHHHHhhcCCCCChHHH-----HHHHHHHHcCCceeEeccccCCCCCHHHHH
Q 016513 156 LAQKMMIYKCNLVGKPVVT-------ATQMLESMIKSPRPTRAEA-----TDVANAVLDGTDCVMLSGESAAGAYPEIAV 223 (388)
Q Consensus 156 ~~qk~ii~~c~~~gkpvi~-------atq~lesM~~~~~ptraEv-----~dv~~av~~g~d~i~Ls~eta~G~~P~~~v 223 (388)
.+.++++|+++|+|+=+ -..+|+.+- .||...+ .-+.-+-..|+|-+++|--. ..+..+|
T Consensus 122 --~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg---~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~---S~v~~~i 193 (366)
T 3noy_A 122 --VREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG---YPSAEALAESALRWSEKFEKWGFTNYKVSIKG---SDVLQNV 193 (366)
T ss_dssp --HHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC---SSHHHHH
T ss_pred --HHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHhCCCCeEEEeeec---CChHHHH
Confidence 36799999999999844 355665442 2443322 23334566699999998654 3566667
Q ss_pred HHHHHHHHH
Q 016513 224 KIMRRICIE 232 (388)
Q Consensus 224 ~~~~~i~~~ 232 (388)
+.-+.+.++
T Consensus 194 ~ayr~la~~ 202 (366)
T 3noy_A 194 RANLIFAER 202 (366)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 665555544
No 247
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=51.83 E-value=76 Score=28.65 Aligned_cols=124 Identities=13% Similarity=0.104 Sum_probs=71.9
Q ss_pred hccccCCCCEEEe-----CCCCC----hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 78 RWGVPNNIDMIAL-----SFVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 78 ~~~l~~g~d~v~~-----sfV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+ +.|+|++.+ .||.+ ..-++.+|+.. +..+-+--|+++++-. ++...++ +|++.+-.
T Consensus 20 ~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh~----- 88 (231)
T 3ctl_A 20 EFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQDY--IAQLARAGADFITLHP----- 88 (231)
T ss_dssp HHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGGT--HHHHHHHTCSEEEECG-----
T ss_pred HHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHHH--HHHHHHcCCCEEEECc-----
Confidence 555 788887533 33333 45566666542 3345677788888553 5666666 79888751
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe-ccccCCC--CCHHHHHH
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML-SGESAAG--AYPEIAVK 224 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L-s~eta~G--~~P~~~v~ 224 (388)
|-+ -.. -.+.++.++++|+-++++. ||. |..| ....+++++|.+++ |-+...| +|.-++++
T Consensus 89 Ea~---~~~-~~~~i~~i~~~G~k~gv~l--------np~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~l~ 152 (231)
T 3ctl_A 89 ETI---NGQ-AFRLIDEIRRHDMKVGLIL--------NPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIPEMLD 152 (231)
T ss_dssp GGC---TTT-HHHHHHHHHHTTCEEEEEE--------CTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCTTHHH
T ss_pred ccC---Ccc-HHHHHHHHHHcCCeEEEEE--------ECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccHHHHH
Confidence 210 111 2578999999999999863 332 2221 13455678998853 5555444 34433443
Q ss_pred HHHH
Q 016513 225 IMRR 228 (388)
Q Consensus 225 ~~~~ 228 (388)
-+++
T Consensus 153 kI~~ 156 (231)
T 3ctl_A 153 KLAE 156 (231)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
No 248
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=51.60 E-value=1.5e+02 Score=28.01 Aligned_cols=113 Identities=14% Similarity=0.242 Sum_probs=69.1
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|.......+...-..|++.+...+ .| .++.+...++.++- ..++.
T Consensus 102 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~~-~~~~~~a~~l~~~~-~~~~~ 163 (342)
T 2gn0_A 102 GVSLSCAMLGIDGKVV-----------MPKGAPKSKVAATCDYSAEVVLHGD-----NF-NDTIAKVSEIVETE-GRIFI 163 (342)
T ss_dssp HHHHHHHHHTCCEEEE-----------ECTTSCHHHHHHHHHHSCEEEECCS-----SH-HHHHHHHHHHHHHH-CCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhc-CCEEe
Confidence 4566788999998763 1222223455566677998775432 23 46666666665442 21110
Q ss_pred HHHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSP--LESLASSAVRTANKA-RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l-~A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
.+.. ++ .......+.++.+++ +.+.|++.+-+|.|..-+++ ..|...|+++
T Consensus 164 ----------~~~~-n~~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 221 (342)
T 2gn0_A 164 ----------PPYD-DPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGV 221 (342)
T ss_dssp ----------CSSS-SHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ----------CCCC-CHHHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEE
Confidence 0110 11 122344467777777 48999999999999776655 4699999999
No 249
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=51.35 E-value=1.9e+02 Score=29.99 Aligned_cols=77 Identities=19% Similarity=0.337 Sum_probs=49.0
Q ss_pred eCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCc-------------------cccCCCCChhCHHHHHhcccc
Q 016513 22 ADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGV-------------------VVDLPTLTEKDKEDILRWGVP 82 (388)
Q Consensus 22 ddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~-------------------~~~~~~lt~~D~~di~~~~l~ 82 (388)
+++.+..+|. .+..+. .+=|.-.++..+++|.. .+++.. +..|.+.+.++.-+
T Consensus 139 ~~~~i~~~v~----~gg~l~---~~KgvnlPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~-~a~dv~~~~~~l~~ 210 (587)
T 2e28_A 139 QAGEIVTTVL----NGGVLK---NKKGVNVPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVR-RASDVLEIRELLEA 210 (587)
T ss_dssp TTTEEEEECC----SCCCBC---SSCBEECTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCC-SHHHHHHHHHHHHH
T ss_pred CCCeEEEEEe----cCCEEc---CCceeecCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCC-CHHHHHHHHHHHHH
Confidence 4567777775 233332 24466677777888732 223232 56677776333334
Q ss_pred CCC-CEEEeCCCCChhhHHHHHHHH
Q 016513 83 NNI-DMIALSFVRKGSDLVNVRKVL 106 (388)
Q Consensus 83 ~g~-d~v~~sfV~sa~dv~~v~~~l 106 (388)
.|. +..+++++++++-++.+.+++
T Consensus 211 ~~~~~~~iiakIE~~eav~nldeIl 235 (587)
T 2e28_A 211 HDALHIQIIAKIENEEGVANIDEIL 235 (587)
T ss_dssp TTCTTSEEEEEECSHHHHHTHHHHH
T ss_pred cCCCCceEEEEECCHHHHHhHHHHH
Confidence 564 678899999999998888876
No 250
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=50.97 E-value=10 Score=35.89 Aligned_cols=69 Identities=14% Similarity=0.228 Sum_probs=49.1
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeec-------
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVA------- 141 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~ig------- 141 (388)
+.+.+ +.+++.|+|+|++-. -++++++++++.+.. ++ +||-.-| .+|+.++++. +|+|-+|
T Consensus 207 tl~ea-~eAl~aGaD~I~LDn-~~~~~l~~av~~~~~---~v----~ieaSGGIt~~~i~~~a~tGVD~IsvGalt~sa~ 277 (287)
T 3tqv_A 207 NLDEL-NQAIAAKADIVMLDN-FSGEDIDIAVSIARG---KV----ALEVSGNIDRNSIVAIAKTGVDFISVGAITKHIK 277 (287)
T ss_dssp SHHHH-HHHHHTTCSEEEEES-CCHHHHHHHHHHHTT---TC----EEEEESSCCTTTHHHHHTTTCSEEECSHHHHSBC
T ss_pred CHHHH-HHHHHcCCCEEEEcC-CCHHHHHHHHHhhcC---Cc----eEEEECCCCHHHHHHHHHcCCCEEEEChhhcCCc
Confidence 45666 778899999999987 567889988888752 33 3333333 4788888887 8999887
Q ss_pred CCcccCCC
Q 016513 142 RGDLGMEI 149 (388)
Q Consensus 142 rgDLg~e~ 149 (388)
.-|||+++
T Consensus 278 ~lD~sl~i 285 (287)
T 3tqv_A 278 AIDLSLQV 285 (287)
T ss_dssp CCCEEEEE
T ss_pred ccceEEEe
Confidence 24666554
No 251
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=50.59 E-value=95 Score=29.29 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=64.2
Q ss_pred cccCCccccCCCCChhCHHHHHhccccCCC-CEEEeCCCCChhhHHHHHHHHccCCCCceEEEee--cCHHhHhhHHHHH
Q 016513 56 VNLPGVVVDLPTLTEKDKEDILRWGVPNNI-DMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--ENQEGVVNFDDIL 132 (388)
Q Consensus 56 vn~p~~~~~~~~lt~~D~~di~~~~l~~g~-d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--Et~~av~nldeI~ 132 (388)
+..|=..-++..++ +.+.. ..+.+.|. .++...++ +++++.+..+.+.+.-+. .+.+.+ -++.--+.++...
T Consensus 11 ~~~Pii~apM~g~s--~~~la-~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~~-p~gvnl~~~~~~~~~~~~~a~ 85 (332)
T 2z6i_A 11 IDYPIFQGGMAWVA--DGDLA-GAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTDK-PFGVNIMLLSPFVEDIVDLVI 85 (332)
T ss_dssp CSSSEEECCCTTTC--CHHHH-HHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCCS-CEEEEECTTSTTHHHHHHHHH
T ss_pred CCCCEEeCCCCCCC--cHHHH-HHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcCC-CEEEEecCCCCCHHHHHHHHH
Confidence 34443333344444 44555 56667776 55555554 566655443333322111 222222 1332122233333
Q ss_pred hh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 133 RE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 133 ~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
+. +|+|.++-|. | ..+++.+++.|.|++.-. .+.. +...+...|+|++.+++
T Consensus 86 ~~g~d~V~~~~g~-----p--------~~~i~~l~~~g~~v~~~v-----------~~~~---~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 86 EEGVKVVTTGAGN-----P--------SKYMERFHEAGIIVIPVV-----------PSVA---LAKRMEKIGADAVIAEG 138 (332)
T ss_dssp HTTCSEEEECSSC-----G--------GGTHHHHHHTTCEEEEEE-----------SSHH---HHHHHHHTTCSCEEEEC
T ss_pred HCCCCEEEECCCC-----h--------HHHHHHHHHcCCeEEEEe-----------CCHH---HHHHHHHcCCCEEEEEC
Confidence 33 6999987552 2 235666777899988531 1222 33456778999999964
No 252
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=50.36 E-value=1.6e+02 Score=29.90 Aligned_cols=112 Identities=16% Similarity=0.188 Sum_probs=68.4
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
+..+|++.|.++.+. .|.......+...-..|++.+... ...-++.+...+++++-...+.
T Consensus 94 vA~aa~~lGi~~~Iv-----------mP~~~p~~Kv~~~r~~GAeVvlv~------~~~dda~~~a~ela~e~g~~~v-- 154 (514)
T 1tdj_A 94 VAFSSARLGVKALIV-----------MPTATADIKVDAVRGFGGEVLLHG------ANFDEAKAKAIELSQQQGFTWV-- 154 (514)
T ss_dssp HHHHHHHTTCCEEEE-----------CCSSCCHHHHHHHHHHSCEEECCC------SSHHHHHHHHHHHHHHHCCEEC--
T ss_pred HHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEEC------CCHHHHHHHHHHHHHhcCCEee--
Confidence 456788999998763 122222345556666799876532 2345676666666554221110
Q ss_pred HHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 241 AVFKEMIRSTPLPMSP--LESLASSAVRTANKAR-AKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l~-A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
.+. .++ ...-..-+.++.++++ .++|++.+-+|.++--++++ +|...|+++
T Consensus 155 ---------~pf-dnp~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgV 212 (514)
T 1tdj_A 155 ---------PPF-DHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAV 212 (514)
T ss_dssp ---------CSS-CCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ---------CCC-CCHHHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEE
Confidence 111 022 1222334677777774 89999999999987766654 799999999
No 253
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=50.35 E-value=58 Score=32.07 Aligned_cols=98 Identities=10% Similarity=0.222 Sum_probs=65.0
Q ss_pred ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEE
Q 016513 95 KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV 173 (388)
Q Consensus 95 sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi 173 (388)
+.++.+.++++..+.| +.+++-.=..+++ |.+.+. +|.+=||.+|+- .++ +++++.+.|||++
T Consensus 99 ~~e~~~~L~~~~~~~G--i~~~stpfD~~sv---d~l~~~~vd~~KIgS~~~~------N~p-----LL~~va~~gKPVi 162 (385)
T 1vli_A 99 PAEWILPLLDYCREKQ--VIFLSTVCDEGSA---DLLQSTSPSAFKIASYEIN------HLP-----LLKYVARLNRPMI 162 (385)
T ss_dssp CGGGHHHHHHHHHHTT--CEEECBCCSHHHH---HHHHTTCCSCEEECGGGTT------CHH-----HHHHHHTTCSCEE
T ss_pred CHHHHHHHHHHHHHcC--CcEEEccCCHHHH---HHHHhcCCCEEEECccccc------CHH-----HHHHHHhcCCeEE
Confidence 3567777777776654 5666644444454 444455 799999988773 222 3556667899999
Q ss_pred EhhhHHHHhhcCCCCChHHHHHHHHHHHc-CC-ceeEeccccCCCCCHH
Q 016513 174 TATQMLESMIKSPRPTRAEATDVANAVLD-GT-DCVMLSGESAAGAYPE 220 (388)
Q Consensus 174 ~atq~lesM~~~~~ptraEv~dv~~av~~-g~-d~i~Ls~eta~G~~P~ 220 (388)
+.|.| -|.+|+...++++.. |. +.++|-. +-.||.
T Consensus 163 LStGm---------aTl~Ei~~Ave~i~~~Gn~~iiLlhc---~s~YPt 199 (385)
T 1vli_A 163 FSTAG---------AEISDVHEAWRTIRAEGNNQIAIMHC---VAKYPA 199 (385)
T ss_dssp EECTT---------CCHHHHHHHHHHHHTTTCCCEEEEEE---CSSSSC
T ss_pred EECCC---------CCHHHHHHHHHHHHHCCCCcEEEEec---cCCCCC
Confidence 98874 367899998888875 65 5555532 345763
No 254
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=50.19 E-value=31 Score=27.41 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=34.2
Q ss_pred HHHHHHHH-HHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 259 SLASSAVR-TANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 259 ~ia~aAv~-~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
..+...++ .|++.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 94 ~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 94 IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 35667777 888999999998874 4788999988876 999987
No 255
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=50.16 E-value=38 Score=30.68 Aligned_cols=52 Identities=10% Similarity=0.115 Sum_probs=39.3
Q ss_pred HHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHH
Q 016513 158 QKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRI 229 (388)
Q Consensus 158 qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i 229 (388)
-+..++.|+++|+++.+-| .- +-.+...++..|+|+|+- .||..+.+.++++
T Consensus 193 ~~~~v~~~~~~G~~V~~WT----------vn---~~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~ 244 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWA----------AH---TPSQITKALDLGVKVFTT-------DRPTLAIALRTEH 244 (250)
T ss_dssp CHHHHHHHHHTTCEEEEEC----------CC---SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEe----------CC---CHHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHh
Confidence 4678999999999998865 11 224556778899999985 6898888776654
No 256
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=50.09 E-value=1.2e+02 Score=31.02 Aligned_cols=77 Identities=18% Similarity=0.212 Sum_probs=47.4
Q ss_pred EeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCcc--------------------ccCCCCChhCHHHHHhcc
Q 016513 21 CADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV--------------------VDLPTLTEKDKEDILRWG 80 (388)
Q Consensus 21 iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~--------------------~~~~~lt~~D~~di~~~~ 80 (388)
++++.+..+|. .+..+ -.+=|.-.++..+++|... ++... +..|...+ +..
T Consensus 172 v~~~~i~~~V~----~gG~L---~~~KgvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr-~a~Dv~~~-r~~ 242 (511)
T 3gg8_A 172 VGSDYVITQAQ----NTATI---GERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQ-SADDVRYI-RGL 242 (511)
T ss_dssp ECSSEEEEEES----SCEEE---CSSCBEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCC-SHHHHHHH-HHH
T ss_pred EeCCEEEEEEE----eCeEE---cCCcceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-CHHHHHHH-HHH
Confidence 45677777775 22222 1244555666667776421 11111 45566666 444
Q ss_pred c-cCCCCEEEeCCCCChhhHHHHHHHH
Q 016513 81 V-PNNIDMIALSFVRKGSDLVNVRKVL 106 (388)
Q Consensus 81 l-~~g~d~v~~sfV~sa~dv~~v~~~l 106 (388)
+ +.|.+.-+++++++++-++.+.+++
T Consensus 243 l~~~~~~~~iiaKIE~~eav~nldeIl 269 (511)
T 3gg8_A 243 LGPRGRHIRIIPKIENVEGLVNFDEIL 269 (511)
T ss_dssp HTGGGTTCEEEEEECSHHHHHTHHHHH
T ss_pred HHhcCCCCeEEEEECCHHHHHhHHHHH
Confidence 4 4566778899999999999888876
No 257
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=50.09 E-value=40 Score=32.76 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=53.7
Q ss_pred CChhhHHHHHHHHccCCCCceEEEe-ecCHHhHhhHHHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCC
Q 016513 94 RKGSDLVNVRKVLGPHAKNIQLMSK-VENQEGVVNFDDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGK 170 (388)
Q Consensus 94 ~sa~dv~~v~~~l~~~~~~~~Iiak-IEt~~av~nldeI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gk 170 (388)
-+.++++.+++.. +.+++.| +-++ +......+. +|+|.+. .|-=..+.+...+ .+..++.++.. ..+
T Consensus 216 ~~~~~i~~lr~~~-----~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v~-~~i 285 (368)
T 2nli_A 216 ISPRDIEEIAGHS-----GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERVN-KRV 285 (368)
T ss_dssp CCHHHHHHHHHHS-----SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHHT-TSS
T ss_pred hhHHHHHHHHHHc-----CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHhC-CCC
Confidence 3567778777765 3577887 3332 333333333 7999984 1210012222222 22222322221 258
Q ss_pred CEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 171 PVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 171 pvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
|+|....+- .-.|+..++..|+|++|+..
T Consensus 286 pVia~GGI~------------~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 286 PIVFDSGVR------------RGEHVAKALASGADVVALGR 314 (368)
T ss_dssp CEEECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred eEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 998755432 34688999999999999974
No 258
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=50.02 E-value=36 Score=32.02 Aligned_cols=121 Identities=11% Similarity=0.062 Sum_probs=69.1
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. |-.+..| ...+...-..|++.+....+... .++.++.+...++.++-...+.+
T Consensus 86 alA~~a~~~G~~~~iv------~p~~~~~----~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~~~ 154 (325)
T 1j0a_A 86 VTGLAAKKLGLDAILV------LRGKEEL----KGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPYVI 154 (325)
T ss_dssp HHHHHHHHTTCEEEEE------EESCCCS----CHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEEEE
T ss_pred HHHHHHHHhCCcEEEE------ECCCCCC----CchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceEEE
Confidence 4556789999998763 1111101 22345556789998777544321 11234555544444321111111
Q ss_pred HHHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSP--LESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
. + +. .++ .+.....+.++.++++ .+.|++..-+|.|+.-+++ .+|...|+++
T Consensus 155 p--~-----~~---~n~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigV 214 (325)
T 1j0a_A 155 P--P-----GG---ASPIGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGI 214 (325)
T ss_dssp C--G-----GG---CSHHHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred c--C-----CC---CCHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEE
Confidence 1 0 00 011 1223455778888874 7999999999999876665 4699999999
No 259
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=49.94 E-value=1.4e+02 Score=30.34 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=48.1
Q ss_pred Ee-CCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCcc-----------------ccCCCC-ChhCHHHHHhccc
Q 016513 21 CA-DGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV-----------------VDLPTL-TEKDKEDILRWGV 81 (388)
Q Consensus 21 id-dG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~-----------------~~~~~l-t~~D~~di~~~~l 81 (388)
++ ++.+..+|. .+..+. .+-|.=.++..+++|... +-+|.+ +..|...+ +..+
T Consensus 156 ~~~~~~i~~~v~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~-r~~l 227 (499)
T 3hqn_D 156 HEDEQTLECTVT----NSHTIS---DRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDV-RKAL 227 (499)
T ss_dssp EEETTEEEEEEC----SCEEEE---TTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHH-HHHH
T ss_pred EcCCCeEEEEEE----eCcEee---CCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHH-HHHH
Confidence 44 456767665 233331 355666677778888421 112222 45666666 4334
Q ss_pred -cCCCCEEEeCCCCChhhHHHHHHHH
Q 016513 82 -PNNIDMIALSFVRKGSDLVNVRKVL 106 (388)
Q Consensus 82 -~~g~d~v~~sfV~sa~dv~~v~~~l 106 (388)
+.|-+.-+++++++++-++.+.+++
T Consensus 228 ~~~~~~i~IiaKIE~~eav~nldeIl 253 (499)
T 3hqn_D 228 GPKGRDIMIICKIENHQGVQNIDSII 253 (499)
T ss_dssp CGGGTTSEEEEEECSHHHHHTHHHHH
T ss_pred HhcCCCCeEEEEECCHHHHHhHHHHH
Confidence 3566777789999999999998886
No 260
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=49.81 E-value=34 Score=27.03 Aligned_cols=42 Identities=21% Similarity=0.282 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC--------CchHHHHHHhhCCCCcEEEE
Q 016513 259 SLASSAVRTANKARAKLIVVLTR--------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 259 ~ia~aAv~~A~~l~A~aIvv~T~--------sG~tA~~vSk~RP~~pIiav 301 (388)
..+...++.|++.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 93 ~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~-~pVlvv 142 (143)
T 3fdx_A 93 SPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAE-CSVLVV 142 (143)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCS-SEEEEE
T ss_pred ChHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCC-CCEEEe
Confidence 35667778899999999999885 4778888888764 999987
No 261
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=49.79 E-value=30 Score=30.79 Aligned_cols=103 Identities=10% Similarity=0.106 Sum_probs=63.9
Q ss_pred CHHHHHhccccCCCCEEEeCCCC-ChhhHHHHHHHHccCCCCceEEE---eecC------HHhHhhHHHHHhh-----cC
Q 016513 72 DKEDILRWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMS---KVEN------QEGVVNFDDILRE-----TD 136 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~-sa~dv~~v~~~l~~~~~~~~Iia---kIEt------~~av~nldeI~~~-----~D 136 (388)
+..+..+.+.++|.|+|=+..-. +..+++++++.+.+.|-.+..+. .+-+ .++++.+...++. ++
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~ 98 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGAD 98 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44444488889999999876421 35678899999988775543332 1211 2345666666654 36
Q ss_pred ceeecCCcccC-CCC----hhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 137 SFMVARGDLGM-EIP----VEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 137 gi~igrgDLg~-e~~----~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.+.+..|...- +.+ ++.+...-+++...|.++|..+.+
T Consensus 99 ~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 99 CLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp CEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 66666664431 122 234555667788888888888775
No 262
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=49.62 E-value=10 Score=36.18 Aligned_cols=69 Identities=20% Similarity=0.315 Sum_probs=50.8
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC------
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR------ 142 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr------ 142 (388)
+.+.+ +.+++.|+|.|++-+. ++++++++++.+.. ++ +||---| ++|+.++++. +|.|-+|.
T Consensus 216 tl~e~-~eAl~aGaDiImLDn~-s~~~l~~av~~~~~---~v----~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa~ 286 (300)
T 3l0g_A 216 NISQV-EESLSNNVDMILLDNM-SISEIKKAVDIVNG---KS----VLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQ 286 (300)
T ss_dssp SHHHH-HHHHHTTCSEEEEESC-CHHHHHHHHHHHTT---SS----EEEEESSCCTTTHHHHHTTTCSEEECGGGTSSCC
T ss_pred CHHHH-HHHHHcCCCEEEECCC-CHHHHHHHHHhhcC---ce----EEEEECCCCHHHHHHHHHcCCCEEEeCccccCCC
Confidence 35666 7889999999999874 67899999888853 33 4443333 4788888887 89998873
Q ss_pred -CcccCCC
Q 016513 143 -GDLGMEI 149 (388)
Q Consensus 143 -gDLg~e~ 149 (388)
-||++++
T Consensus 287 ~lDisl~i 294 (300)
T 3l0g_A 287 NKDIGLDI 294 (300)
T ss_dssp CCCEEEEE
T ss_pred cceeEEEe
Confidence 5777665
No 263
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=49.60 E-value=31 Score=31.10 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=55.0
Q ss_pred HHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh-hcCceeecCCcccCCCChhh
Q 016513 75 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR-ETDSFMVARGDLGMEIPVEK 153 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-~~Dgi~igrgDLg~e~~~~~ 153 (388)
.+.+.+.+.|+|++.+|- ..++++..+|+.++. -..+.+=|= ++| .+..+.++ -+|.++|||+=+..+=|.+.
T Consensus 126 ~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~~---~~~vtPGI~-~~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~~a 199 (222)
T 4dbe_A 126 YIKNVIREISPKGIVVGG-TKLDHITQYRRDFEK---MTIVSPGMG-SQG-GSYGDAVCAGADYEIIGRSIYNAGNPLTA 199 (222)
T ss_dssp HHHHHHHHHCCSEEEECT-TCHHHHHHHHHHCTT---CEEEECCBS-TTS-BCTTHHHHHTCSEEEECHHHHTSSSHHHH
T ss_pred HHHHHHHHhCCCEEEECC-CCHHHHHHHHHhCCC---CEEEcCCcc-cCc-cCHHHHHHcCCCEEEECHHhcCCCCHHHH
Confidence 343778889999998874 446889999887742 223344452 222 14544444 49999999999998888765
Q ss_pred HHHHHHHHHHH
Q 016513 154 IFLAQKMMIYK 164 (388)
Q Consensus 154 v~~~qk~ii~~ 164 (388)
...+++.+-+.
T Consensus 200 a~~i~~~i~~~ 210 (222)
T 4dbe_A 200 LRTINKIIEDK 210 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555443
No 264
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=49.52 E-value=72 Score=29.47 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=65.7
Q ss_pred HHHHhccccCCCCEEEeC--------------CCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCce
Q 016513 74 EDILRWGVPNNIDMIALS--------------FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSF 138 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~s--------------fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi 138 (388)
+.+ +...+.|+++|.+. .-++.+.++++++. . +++++.++-.. -.+.++...+. +|++
T Consensus 32 ~~a-~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~---~--~~Pvi~~~~~~-~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 32 EQA-VIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAA---V--SIPVMAKVRIG-HFVEAMILEAIGVDFI 104 (297)
T ss_dssp HHH-HHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTT---C--SSCEEEEEETT-CHHHHHHHHHTTCSEE
T ss_pred HHH-HHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHh---c--CCCeEEEeccC-CHHHHHHHHHCCCCEE
Confidence 344 66778899999762 12244445444432 2 34555543211 14455555554 7888
Q ss_pred eecCCcccCCCChhhHHHHHHHHHHHHHHc--CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCC
Q 016513 139 MVARGDLGMEIPVEKIFLAQKMMIYKCNLV--GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAG 216 (388)
Q Consensus 139 ~igrgDLg~e~~~~~v~~~qk~ii~~c~~~--gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G 216 (388)
|.......++ +++.+++. +.++..-+ -+..| ...+...|+|.+...+|...|
T Consensus 105 -----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v-----------~~~~~---~~~a~~~Gad~I~v~G~~~~g 158 (297)
T 2zbt_A 105 -----DESEVLTPAD-------EEHHIDKWKFKVPFVCGA-----------RNLGE---ALRRIAEGAAMIRTKGEAGTG 158 (297)
T ss_dssp -----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE-----------SSHHH---HHHHHHTTCSEEEECCCSSSC
T ss_pred -----eeeCCCChHH-------HHHHHHHhCCCceEEeec-----------CCHHH---HHHHHHcCCCEEEEcccccCc
Confidence 2222122111 22223332 56665211 11222 345788999999999998888
Q ss_pred CCHHHHHHHHHHHHH
Q 016513 217 AYPEIAVKIMRRICI 231 (388)
Q Consensus 217 ~~P~~~v~~~~~i~~ 231 (388)
-+.++..-++++..
T Consensus 159 -~~~e~~~~~~~~~~ 172 (297)
T 2zbt_A 159 -NVVEAVRHARTMWK 172 (297)
T ss_dssp -CTHHHHHHHHHHHH
T ss_pred -chHHHHhhHHHHHH
Confidence 45667666555543
No 265
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=49.42 E-value=37 Score=27.93 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|++.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 105 ~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~-~PVlvv 154 (170)
T 2dum_A 105 PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTK-KPVLII 154 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCC-CCEEEE
Confidence 5666778889999999999876 3668888888865 999999
No 266
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=49.33 E-value=46 Score=33.14 Aligned_cols=122 Identities=17% Similarity=0.201 Sum_probs=67.2
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++++. .|.......+...-..|++.+....+...+ .+...++...++.++....++.
T Consensus 175 AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 4566788999998763 222222334556667799987765432111 1222344444444332221110
Q ss_pred HHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
.+ |. .+.++..-....+.++.++++ .+.||+.+-+|.|+.-++++ .|.+.|+++
T Consensus 243 ~q-~~-------n~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigV 302 (435)
T 1jbq_A 243 DQ-YR-------NASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGV 302 (435)
T ss_dssp CT-TT-------CTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred Cc-cC-------CcccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEE
Confidence 00 00 011111112334677777774 79999999999998766654 699999999
No 267
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=49.26 E-value=50 Score=31.44 Aligned_cols=31 Identities=26% Similarity=0.515 Sum_probs=22.9
Q ss_pred CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 169 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 169 gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
+.|+|....+- ...|+..++..|+|++++..
T Consensus 251 ~ipvia~GGI~------------~~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 251 ASTMIASGGLQ------------DALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp TSEEEEESSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred CCeEEEECCCC------------CHHHHHHHHHcCCCEEEEcH
Confidence 68887644322 23588899999999999974
No 268
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=49.05 E-value=57 Score=32.46 Aligned_cols=119 Identities=13% Similarity=0.177 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|..+....+...-..|++.+....+. .| -++++...+++++-+..++.
T Consensus 189 AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~~-~~a~~~a~el~~~~~~~~~i 253 (430)
T 4aec_A 189 GLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---GM-TGAVQKAEEILKNTPDAYML 253 (430)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---Ch-HHHHHHHHHHHHhcCCcEEe
Confidence 4556688999998763 233333445566777899988775331 12 35555555554432222211
Q ss_pred HHHHHHHHhcCCCCCCchhHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPLESLASSAVRTANKA--RAKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l--~A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
.+ |. .|..+..-....+.++.+++ ..+.|++..-+|.|.--++++ .|.+.|+++
T Consensus 254 ~~-~~-------np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigV 313 (430)
T 4aec_A 254 QQ-FD-------NPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGV 313 (430)
T ss_dssp CT-TT-------CTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cC-CC-------CccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 00 00 01111122344567777777 478999999999987766554 799999999
No 269
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=49.02 E-value=25 Score=32.87 Aligned_cols=94 Identities=12% Similarity=0.177 Sum_probs=58.5
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHH-HccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKV-LGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~-l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|++++. +.-|.++=+++.+. ....+.++++|+-+= |.++++.....-+. +|++++-+-.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 28 IEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 378889999999863 34455555555444 344455788999884 46677666666555 79999875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.- .+.+.+...-+.| |.+.+.|+++
T Consensus 108 ~~-~s~~~l~~~f~~i---a~a~~lPiil 132 (291)
T 3a5f_A 108 NK-TTQKGLVKHFKAV---SDAVSTPIII 132 (291)
T ss_dssp SC-CCHHHHHHHC-CT---GGGCCSCEEE
T ss_pred CC-CCHHHHHHHHHHH---HHhcCCCEEE
Confidence 22 2334444444444 3445788876
No 270
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=48.94 E-value=79 Score=29.57 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=68.7
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
+..+|+..|.++.+. .|.......+...-..|++.+...++. .| .++.+...+++++-...++-.
T Consensus 82 lA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~i~ 146 (322)
T 1z7w_A 82 LAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---GM-KGAIAKAEEILAKTPNGYMLQ 146 (322)
T ss_dssp HHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEECC
T ss_pred HHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCeEeCC
Confidence 556788999998763 122222344566667799987654321 12 356665555544321211100
Q ss_pred HHHHHHHhcCCCCCCchhHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 241 AVFKEMIRSTPLPMSPLESLASSAVRTANKA--RAKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l--~A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
+ |. .+..+..-....+.++.+++ +.+.|++.+-+|.|..-++++ .|...|+++
T Consensus 147 ~-~~-------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 205 (322)
T 1z7w_A 147 Q-FE-------NPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGV 205 (322)
T ss_dssp T-TT-------CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred C-CC-------ChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEE
Confidence 0 00 01011111233467777787 379999999999998766654 699999999
No 271
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=48.94 E-value=71 Score=29.62 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=67.3
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+.- |.......+...-..|++.+....+. .| .++.+...++.++-.. ++.
T Consensus 79 a~A~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~l~~~~~~-~~~ 142 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLVM-----------PDTMSLERRNLLRAYGAELVLTPGAQ---GM-RGAIAKAEELVREHGY-FMP 142 (308)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ESCSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHHCC-BCC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHHCcC-CcC
Confidence 46677889999987631 22122234455667799988776432 12 4666666666554322 111
Q ss_pred HHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
.+ |. . +.....-....+.++.++++ .+.|++.+-+|.|+.-+++ ..|...|+++
T Consensus 143 ~~-~~-----n--~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigv 202 (308)
T 2egu_A 143 QQ-FK-----N--EANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAV 202 (308)
T ss_dssp ----------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred Cc-CC-----C--hhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEE
Confidence 11 11 0 11111112334566776764 7899999999999776664 4699999999
No 272
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=48.63 E-value=33 Score=28.50 Aligned_cols=41 Identities=27% Similarity=0.293 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|++.+++.||+-++ -|+++..+.+.-| |||+.+
T Consensus 107 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~-~PVlvV 156 (163)
T 1tq8_A 107 PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAK-VDVLIV 156 (163)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCC-CCEEEE
Confidence 4566677888999999999886 2667888888765 999999
No 273
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=48.24 E-value=2.1e+02 Score=28.72 Aligned_cols=186 Identities=16% Similarity=0.062 Sum_probs=106.9
Q ss_pred CCChhCHHHHHhccccCCCCEEEeCC----C-----CChhhHHHHHHHHccCCCCceEEEeec--CHHhH---------h
Q 016513 67 TLTEKDKEDILRWGVPNNIDMIALSF----V-----RKGSDLVNVRKVLGPHAKNIQLMSKVE--NQEGV---------V 126 (388)
Q Consensus 67 ~lt~~D~~di~~~~l~~g~d~v~~sf----V-----~sa~dv~~v~~~l~~~~~~~~IiakIE--t~~av---------~ 126 (388)
.++..|+..|++...+.|++.|=+-+ + -++++.+.++.+-.. .+++.+.+.+= +..|. .
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 35556666664555678999987753 1 145555555554432 24555555542 22232 2
Q ss_pred hHHHHHhh-cCce--eecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHc
Q 016513 127 NFDDILRE-TDSF--MVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLD 202 (388)
Q Consensus 127 nldeI~~~-~Dgi--~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~ 202 (388)
+++..++. .|.+ +.+-.|+ .-.+..++.++++|+.+..+- |+...+.=+...+.+++. +...
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 170 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDV----------RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAEL 170 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcCEEEEEEecCHH----------HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHC
Confidence 23444443 4633 3333333 234678899999999885322 222333335666777666 6677
Q ss_pred CCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCC
Q 016513 203 GTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRG 282 (388)
Q Consensus 203 g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~s 282 (388)
|+|.|.| .+|+=+-.|-++-+.+..+.++..-.+.. ..+. ..-+|.+...+|-+.+|+ +|=-|-.
T Consensus 171 Gad~I~l-~DT~G~~~P~~v~~lv~~l~~~~~~~i~~-------H~Hn------d~GlAvAN~laAv~AGa~-~VD~ti~ 235 (464)
T 2nx9_A 171 GVDSIAL-KDMAGILTPYAAEELVSTLKKQVDVELHL-------HCHS------TAGLADMTLLKAIEAGVD-RVDTAIS 235 (464)
T ss_dssp TCSEEEE-EETTSCCCHHHHHHHHHHHHHHCCSCEEE-------EECC------TTSCHHHHHHHHHHTTCS-EEEEBCG
T ss_pred CCCEEEE-cCCCCCcCHHHHHHHHHHHHHhcCCeEEE-------EECC------CCChHHHHHHHHHHhCCC-EEEEecc
Confidence 9999999 48888888999888888777654211110 0011 123466666777788888 4444433
No 274
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=48.05 E-value=30 Score=33.11 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=65.5
Q ss_pred hhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCC--CceEEEee-------cC--HH-hHhhHHHHHhhcCc
Q 016513 70 EKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAK--NIQLMSKV-------EN--QE-GVVNFDDILRETDS 137 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~--~~~IiakI-------Et--~~-av~nldeI~~~~Dg 137 (388)
+.|...+++.|.+.|++.++++-+ +.++.+.+.++..+... .+.+++-+ .. .+ .++.+.+.++..+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 567777768999999999888865 67788877777654321 01334333 11 11 45556666654433
Q ss_pred eeecCCcccCCCCh-h-hHHHHH----HHHHHHHHH-cCCCEEEhh
Q 016513 138 FMVARGDLGMEIPV-E-KIFLAQ----KMMIYKCNL-VGKPVVTAT 176 (388)
Q Consensus 138 i~igrgDLg~e~~~-~-~v~~~q----k~ii~~c~~-~gkpvi~at 176 (388)
-++|=|+.|.+.-. . .-...| ++-++.|++ .++|+++-+
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~ 175 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHC 175 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 45555777766532 1 111233 466788999 999999865
No 275
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=47.86 E-value=89 Score=29.97 Aligned_cols=114 Identities=16% Similarity=0.210 Sum_probs=68.2
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|++.|.++.+. .|..+....+...-..|++.+...+ .| -++.+...+++++-...++-
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~~~~ 169 (364)
T 4h27_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGWVYI 169 (364)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCeEEe
Confidence 3566789999998763 1222223345556667999876642 23 35666666655432111111
Q ss_pred HHHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----C-CCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSP--LESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----R-PAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----R-P~~pIiav 301 (388)
.+. .++ .+.-...+.++.++++ .+.|++.+-+|.|.--++++ . |+++|+++
T Consensus 170 ----------~~~-~np~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigV 229 (364)
T 4h27_A 170 ----------PPF-DDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAM 229 (364)
T ss_dssp ----------CSS-CSHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEE
T ss_pred ----------CCC-CCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEE
Confidence 010 122 1222345677888874 69999999999987655443 3 88999998
No 276
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=47.80 E-value=28 Score=34.27 Aligned_cols=95 Identities=14% Similarity=0.138 Sum_probs=48.7
Q ss_pred hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEE
Q 016513 96 GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV 173 (388)
Q Consensus 96 a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi 173 (388)
.++++.+++.. +.+++.|.= ...+......+. +|+|.+. +|-=..+.+...+ .+..++.++.. -..|+|
T Consensus 241 ~~~i~~lr~~~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~-~~l~~v~~av~-~~ipVi 311 (392)
T 2nzl_A 241 WEDIKWLRRLT-----SLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLDGVPATI-DVLPEIVEAVE-GKVEVF 311 (392)
T ss_dssp HHHHHHHC--C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHH-HHHHHHHHHHT-TSSEEE
T ss_pred HHHHHHHHHhh-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChH-HHHHHHHHHcC-CCCEEE
Confidence 44455544433 367888721 123333333443 7999994 1110011222222 11222222221 248888
Q ss_pred EhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 174 TATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 174 ~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
....+- -..|+..++..|+|++++..
T Consensus 312 a~GGI~------------~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 312 LDGGVR------------KGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp ECSSCC------------SHHHHHHHHHTTCSEEEECH
T ss_pred EECCCC------------CHHHHHHHHHhCCCeeEECH
Confidence 755432 34789999999999999975
No 277
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=47.69 E-value=80 Score=29.79 Aligned_cols=171 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred CHHHHHhccccCCCCEEEeC---------CCC-----ChhhHHHHHHHHccCCCCceEEEe--ecCHHhHhhHHHHHhh-
Q 016513 72 DKEDILRWGVPNNIDMIALS---------FVR-----KGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE- 134 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s---------fV~-----sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~- 134 (388)
+.+.. +..-+.|++.|.+= |-. +.++++++++.+ .+++++| |-. ++..+.+.+.
T Consensus 30 ~~e~A-~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-----~iPvl~k~~i~~---ide~qil~aaG 100 (297)
T 4adt_A 30 NVEQA-KIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-----SINVLAKVRIGH---FVEAQILEELK 100 (297)
T ss_dssp SHHHH-HHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-----CSEEEEEEETTC---HHHHHHHHHTT
T ss_pred cHHHH-HHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-----CCCEEEeccCCc---HHHHHHHHHcC
Q ss_pred cCceeecCCcccCCCChhhHHHHHHHHHHHHHH--cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccc
Q 016513 135 TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNL--VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~--~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~e 212 (388)
+|+| |.+..+...++ +..+++ .|.++++-.. ...+...++..|+|.|-..+.
T Consensus 101 AD~I-----d~s~~~~~~~l-------i~~i~~~~~g~~vvv~v~--------------~~~Ea~~a~~~Gad~I~v~g~ 154 (297)
T 4adt_A 101 VDML-----DESEVLTMADE-------YNHINKHKFKTPFVCGCT--------------NLGEALRRISEGASMIRTKGE 154 (297)
T ss_dssp CSEE-----EEETTSCCSCS-------SCCCCGGGCSSCEEEEES--------------SHHHHHHHHHHTCSEEEECCC
T ss_pred CCEE-----EcCCCCCHHHH-------HHHHHhcCCCCeEEEEeC--------------CHHHHHHHHhCCCCEEEECCC
Q ss_pred cCCCCCHHHHHHHHHHHHHHH---------------hcccchHHHHHHHHhcCCCCCC--chhHH-HHHHHHHHHhcCCc
Q 016513 213 SAAGAYPEIAVKIMRRICIEA---------------ESSLDYRAVFKEMIRSTPLPMS--PLESL-ASSAVRTANKARAK 274 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~a---------------E~~~~~~~~~~~~~~~~~~~~~--~~~~i-a~aAv~~A~~l~A~ 274 (388)
-..| .-.++|+++..+-.+. -....-..+..++....+.|.- ..--| ...-+..+...+|+
T Consensus 155 ~gTG-~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~GAd 233 (297)
T 4adt_A 155 AGTG-NIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLGMD 233 (297)
T ss_dssp TTSC-CCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTTCS
T ss_pred cCCC-chHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcCCC
Q ss_pred EEEE
Q 016513 275 LIVV 278 (388)
Q Consensus 275 aIvv 278 (388)
++++
T Consensus 234 gVlV 237 (297)
T 4adt_A 234 GVFV 237 (297)
T ss_dssp CEEE
T ss_pred EEEE
No 278
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=47.62 E-value=61 Score=38.81 Aligned_cols=119 Identities=9% Similarity=0.016 Sum_probs=71.1
Q ss_pred HHHHhccccCCCCE--EEeCCCC-ChhhHHHHHHHHccCCCCceEEEeecCH-HhHhhHHHHHhh-cCcee---ecCCcc
Q 016513 74 EDILRWGVPNNIDM--IALSFVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQ-EGVVNFDDILRE-TDSFM---VARGDL 145 (388)
Q Consensus 74 ~di~~~~l~~g~d~--v~~sfV~-sa~dv~~v~~~l~~~~~~~~IiakIEt~-~av~nldeI~~~-~Dgi~---igrgDL 145 (388)
..+ +.+++.|++. |.+++-. +.++ +.+++.+. .+.++..+-+. ++.+....+.+. +|+|+ +--+|=
T Consensus 657 ~~~-~~~~~~gv~i~gv~~~~G~p~~e~---~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~ea 730 (2060)
T 2uva_G 657 PLL-GRLRADGVPIEGLTIGAGVPSIEV---ANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRG 730 (2060)
T ss_dssp HHH-HHHHTTTCCEEEEEEESSCCCHHH---HHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTS
T ss_pred HHH-HHHHHcCCCcceEeecCCCCCHHH---HHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccC
Confidence 445 7788999998 8777754 3333 34455544 35666666443 344443445554 79988 443444
Q ss_pred cCCCChhhHHHHHHHHHHHHHH-cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHH-----------HcCCceeEec
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNL-VGKPVVTATQMLESMIKSPRPTRAEATDVANAV-----------LDGTDCVMLS 210 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~-~gkpvi~atq~lesM~~~~~ptraEv~dv~~av-----------~~g~d~i~Ls 210 (388)
|-..+.+++....-.++...++ .+.|+|.+..+- .-.|++.++ ..|+|++++.
T Consensus 731 GGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~------------~g~~i~aaltg~ws~~~g~palGAdgV~~G 795 (2060)
T 2uva_G 731 GGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG------------GSEDTYPYLTGSWSTKFGYPPMPFDGCMFG 795 (2060)
T ss_dssp SSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC------------SHHHHHHHHHTCGGGTTTSCCCCCSCEEES
T ss_pred CCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC------------CHHHHHHHhcCcchhhcCCCCCCCCEEEEc
Confidence 4444432221222234444444 479999877644 346889999 9999999983
No 279
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=47.57 E-value=26 Score=34.49 Aligned_cols=87 Identities=16% Similarity=0.199 Sum_probs=58.6
Q ss_pred ChhCHHHHHhccccC-CCCEEEeCC-------CCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceee
Q 016513 69 TEKDKEDILRWGVPN-NIDMIALSF-------VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMV 140 (388)
Q Consensus 69 t~~D~~di~~~~l~~-g~d~v~~sf-------V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~i 140 (388)
.+.|...| +.+.+. |+++|-++- +-+.+++.++++.+.++|-.+ +-+|+ +.--++| ..
T Consensus 29 g~~d~~~L-~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i---~~i~s---~~~~~~i-------~~ 94 (386)
T 3bdk_A 29 GKKDPVTL-EEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEI---TVIES---IPVHEDI-------KQ 94 (386)
T ss_dssp CTTCSSCH-HHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEE---EEEEC---CCCCHHH-------HT
T ss_pred CCCCHHHH-HHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEE---EEEec---ccccccc-------cc
Confidence 33555666 778889 999998762 446689999999999877443 33444 1101122 22
Q ss_pred cCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 141 ARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 141 grgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
+..+ .++....-++.++.|.+.|.++++.
T Consensus 95 ~~~~------r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 95 GKPN------RDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp TCTT------HHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CcHH------HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 2211 5667777889999999999999874
No 280
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=47.37 E-value=38 Score=33.03 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=23.6
Q ss_pred CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 169 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 169 gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
..|+|....+- --.|++.++..|||++++..
T Consensus 278 ~ipvia~GGI~------------~g~Dv~KaLalGAdaV~ig~ 308 (365)
T 3sr7_A 278 KVEILASGGIR------------HPLDIIKALVLGAKAVGLSR 308 (365)
T ss_dssp TSEEEECSSCC------------SHHHHHHHHHHTCSEEEESH
T ss_pred CCeEEEeCCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 56777655433 24699999999999999975
No 281
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=47.33 E-value=1.4e+02 Score=28.78 Aligned_cols=119 Identities=15% Similarity=0.188 Sum_probs=65.6
Q ss_pred CChhCHHHH-------HhccccCCCCEEEe-------------CCCCChhh----------------HHHHHHHHccCCC
Q 016513 68 LTEKDKEDI-------LRWGVPNNIDMIAL-------------SFVRKGSD----------------LVNVRKVLGPHAK 111 (388)
Q Consensus 68 lt~~D~~di-------~~~~l~~g~d~v~~-------------sfV~sa~d----------------v~~v~~~l~~~~~ 111 (388)
+|..|+..+ ++.+.+.|+|+|=+ |..+...| ++.+|+.++ .
T Consensus 151 mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg---~ 227 (365)
T 2gou_A 151 MTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIG---A 227 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHC---G
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcC---C
Confidence 555555444 25668899999988 43333333 555555553 3
Q ss_pred CceEEEeecCH---------HhHhhHHHHHhh-----cCceeecCCcccC--CCChhhHHHHHHHHHHH-HHHcCCCEEE
Q 016513 112 NIQLMSKVENQ---------EGVVNFDDILRE-----TDSFMVARGDLGM--EIPVEKIFLAQKMMIYK-CNLVGKPVVT 174 (388)
Q Consensus 112 ~~~IiakIEt~---------~av~nldeI~~~-----~Dgi~igrgDLg~--e~~~~~v~~~qk~ii~~-c~~~gkpvi~ 174 (388)
+ .|..||-.- ..++...++++. .|.|-+..+.+.- ..+. ..++. .+..++|++.
T Consensus 228 ~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~--------~~~~~i~~~~~iPvi~ 298 (365)
T 2gou_A 228 E-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV--------SFKRALREAYQGVLIY 298 (365)
T ss_dssp G-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH--------HHHHHHHHHCCSEEEE
T ss_pred C-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH--------HHHHHHHHHCCCcEEE
Confidence 4 677777321 123333333332 5878776554311 1121 22222 2345789887
Q ss_pred hhhHHHHhhcCCCCChHHHHHHHHHHHcC-CceeEecc
Q 016513 175 ATQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLSG 211 (388)
Q Consensus 175 atq~lesM~~~~~ptraEv~dv~~av~~g-~d~i~Ls~ 211 (388)
... . |. .+...++..| +|+|++..
T Consensus 299 ~Gg---------i-~~---~~a~~~l~~g~aD~V~igR 323 (365)
T 2gou_A 299 AGR---------Y-NA---EKAEQAINDGLADMIGFGR 323 (365)
T ss_dssp ESS---------C-CH---HHHHHHHHTTSCSEEECCH
T ss_pred eCC---------C-CH---HHHHHHHHCCCcceehhcH
Confidence 543 2 32 3557788888 99999963
No 282
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=47.19 E-value=32 Score=33.48 Aligned_cols=72 Identities=11% Similarity=0.117 Sum_probs=43.0
Q ss_pred HHHHHhccccCCCCEEEeCC------------CCChhhHHHHHHH----HccCCC-CceEEEeecCHHhHhhHHHHHh--
Q 016513 73 KEDILRWGVPNNIDMIALSF------------VRKGSDLVNVRKV----LGPHAK-NIQLMSKVENQEGVVNFDDILR-- 133 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sf------------V~sa~dv~~v~~~----l~~~~~-~~~IiakIEt~~av~nldeI~~-- 133 (388)
.++. +.+.+.|+|+|.++. ..+.+.+.++++. +.+.+. ++.||+- -|+.+-.++++
T Consensus 222 ~e~a-~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kal 296 (393)
T 2qr6_A 222 YTTA-LHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAI 296 (393)
T ss_dssp HHHH-HHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHH
T ss_pred HHHH-HHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHH
Confidence 4566 777889999999975 3334445555554 121232 3777771 23444444443
Q ss_pred --hcCceeecCCcccCCC
Q 016513 134 --ETDSFMVARGDLGMEI 149 (388)
Q Consensus 134 --~~Dgi~igrgDLg~e~ 149 (388)
=+|++++||.=|...-
T Consensus 297 alGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 297 ACGADAVVLGSPLARAEE 314 (393)
T ss_dssp HHTCSEEEECGGGGGSTT
T ss_pred HcCCCEEEECHHHHcCCC
Confidence 3799999988665553
No 283
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=46.95 E-value=89 Score=29.20 Aligned_cols=81 Identities=17% Similarity=0.174 Sum_probs=49.1
Q ss_pred cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcC-CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecccc
Q 016513 135 TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVG-KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES 213 (388)
Q Consensus 135 ~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~g-kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~et 213 (388)
+|.||--...-|...|+.. +...+.+++. ... .|||++.. .-| -+|++.++..|+|++++.+=.
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GG---------I~t---psDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAG---------LGL---PSHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESC---------CCS---HHHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCC---------CCC---HHHHHHHHHcCCCEEEEChHH
Confidence 4566543333344444433 3333333221 234 79987543 222 257899999999999998877
Q ss_pred CCCCCHHHHHHHHHHHH
Q 016513 214 AAGAYPEIAVKIMRRIC 230 (388)
Q Consensus 214 a~G~~P~~~v~~~~~i~ 230 (388)
+.++.|.+-.+.|..-+
T Consensus 211 ~~a~dP~~ma~af~~Av 227 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAV 227 (268)
T ss_dssp HTSSSHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 88899976666655544
No 284
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=46.70 E-value=60 Score=29.77 Aligned_cols=96 Identities=11% Similarity=0.228 Sum_probs=59.4
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee--------cCHHhHhhHHHHHhhcCceeecCC
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV--------ENQEGVVNFDDILRETDSFMVARG 143 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI--------Et~~av~nldeI~~~~Dgi~igrg 143 (388)
|...+.+.+.+.|++.+++ -.+.++.+.+.++..+. + .+++-+ +..+-++.+++.+. .. +|=|
T Consensus 15 d~~~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~~-~--~v~~~~GiHP~~~~~~~~~l~~l~~~~~--~~--vaIG 85 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV--TTTPAAWRGTLALAAGR-P--HVWTALGFHPEVVSERAADLPWFDRYLP--ET--RFVG 85 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTTC-T--TEEECBCCCGGGTTTTGGGTHHHHHHGG--GC--SEEE
T ss_pred CHHHHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHhC-C--CeEEEEeeCcccccccHHHHHHHHHHhh--hc--cEEE
Confidence 6666658888999998775 46888888888776543 1 233322 22233344444442 22 4456
Q ss_pred cccCCCChh--hHHHHH----HHHHHHHHHcCCCEE-Ehh
Q 016513 144 DLGMEIPVE--KIFLAQ----KMMIYKCNLVGKPVV-TAT 176 (388)
Q Consensus 144 DLg~e~~~~--~v~~~q----k~ii~~c~~~gkpvi-~at 176 (388)
.-|.+.-.. .-...| ++.++.|++.++|++ +-+
T Consensus 86 EiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~ 125 (254)
T 3gg7_A 86 EVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHS 125 (254)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 777776542 233445 467788999999999 854
No 285
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=46.63 E-value=92 Score=27.53 Aligned_cols=91 Identities=7% Similarity=-0.043 Sum_probs=53.0
Q ss_pred CHHHHHhccccCCCCEEEeCCC-----CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-----cCceeec
Q 016513 72 DKEDILRWGVPNNIDMIALSFV-----RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-----TDSFMVA 141 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV-----~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-----~Dgi~ig 141 (388)
+..+..+.+.++|.|+|=+... .+.++++++++.+.+.|-.+..+.-- ..+.++.+...++. ++.+.+.
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEec
Confidence 4455548888999999977643 46888999999998887654332211 00233344444333 3444443
Q ss_pred CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 142 RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 142 rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
++ . ...+++...|.++|..+.+
T Consensus 110 p~-------~----~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 110 PN-------Y----ELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp EC-------G----GGHHHHHHHHHHHTCEEEE
T ss_pred CC-------H----HHHHHHHHHHHHcCCEEEE
Confidence 33 1 1234566666666766553
No 286
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=46.59 E-value=1.6e+02 Score=27.79 Aligned_cols=154 Identities=16% Similarity=0.085 Sum_probs=88.1
Q ss_pred CCCChhCHHHHHhccc-cCCCCEEEeCCCCChhhHHHHHHHHccCC---CCceEEEeecCHHhHhhHHHHHhh-cCceee
Q 016513 66 PTLTEKDKEDILRWGV-PNNIDMIALSFVRKGSDLVNVRKVLGPHA---KNIQLMSKVENQEGVVNFDDILRE-TDSFMV 140 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l-~~g~d~v~~sfV~sa~dv~~v~~~l~~~~---~~~~IiakIEt~~av~nldeI~~~-~Dgi~i 140 (388)
|..|+.|...+.+.|. +.++..|.++ +.-|..+++.|...+ .++.+.+=|==|.|-...+..+.. .+++--
T Consensus 37 p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~ 112 (297)
T 4eiv_A 37 DGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALKD 112 (297)
T ss_dssp TTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 4557777666547777 6787777764 567888888887654 467777777555554444433321 111111
Q ss_pred cCC--cccCCCCh---------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHH-HHHHH-HHHHcCCcee
Q 016513 141 ARG--DLGMEIPV---------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE-ATDVA-NAVLDGTDCV 207 (388)
Q Consensus 141 grg--DLg~e~~~---------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraE-v~dv~-~av~~g~d~i 207 (388)
|.. |+-+.++. +.+..-.+.+.++|..+-..||+-|-.| +..| +.... -++..|+|+|
T Consensus 113 GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~AGADFV 183 (297)
T 4eiv_A 113 GADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALEGGADFL 183 (297)
T ss_dssp TCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHHHTCSEE
T ss_pred CCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhCCCEE
Confidence 111 22223322 2333444566666643333457655544 3445 33332 3677899998
Q ss_pred EeccccCCCCCHHHHHHHHHHHHHH
Q 016513 208 MLSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 208 ~Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
==|.==..|.--.+.|+.|.+.+++
T Consensus 184 KTSTGf~~~gAT~edV~lM~~~v~~ 208 (297)
T 4eiv_A 184 QTSSGLGATHATMFTVHLISIALRE 208 (297)
T ss_dssp ECCCSSSSCCCCHHHHHHHHHHHHH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 7664333334567999999999964
No 287
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=46.58 E-value=1.3e+02 Score=28.27 Aligned_cols=72 Identities=10% Similarity=0.149 Sum_probs=47.9
Q ss_pred HHHHhh-cCceeecCC-----cccCCC--ChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcC-CCCChHHHHHHHHH
Q 016513 129 DDILRE-TDSFMVARG-----DLGMEI--PVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKS-PRPTRAEATDVANA 199 (388)
Q Consensus 129 deI~~~-~Dgi~igrg-----DLg~e~--~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~-~~ptraEv~dv~~a 199 (388)
.+++++ +|.|.+=+| ..|... ..++-+....++.+++++..+-+++ |.+. |.-+ -.|+..+
T Consensus 177 ~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdviv-------Lc~gGpIst---peDv~~~ 246 (286)
T 2p10_A 177 VAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIII-------LSHGGPIAN---PEDARFI 246 (286)
T ss_dssp HHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEE-------EEESTTCCS---HHHHHHH
T ss_pred HHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEE-------EecCCCCCC---HHHHHHH
Confidence 334444 688888766 455554 4567688899999999999887776 3344 4443 4577888
Q ss_pred HHc--CCceeEec
Q 016513 200 VLD--GTDCVMLS 210 (388)
Q Consensus 200 v~~--g~d~i~Ls 210 (388)
+.. |+|++...
T Consensus 247 l~~t~G~~G~~gA 259 (286)
T 2p10_A 247 LDSCQGCHGFYGA 259 (286)
T ss_dssp HHHCTTCCEEEES
T ss_pred HhcCCCccEEEee
Confidence 888 99999984
No 288
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=46.46 E-value=2.1e+02 Score=27.54 Aligned_cols=136 Identities=12% Similarity=0.102 Sum_probs=73.0
Q ss_pred eecCCCccccCCccccCCCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhH
Q 016513 49 MLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNF 128 (388)
Q Consensus 49 ~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nl 128 (388)
.|....++++|=..-++...++.+... ..+..-|+.++. . -.++++..+..+.+.+.+ +..+.+.+=... .+.+
T Consensus 37 ~l~~~~~l~~Pii~apM~~vt~~~lA~--avA~~GGlgii~-~-~~s~e~~~~~I~~vk~~~-~~pvga~ig~~~-~e~a 110 (361)
T 3khj_A 37 KLTKNVSLKIPLISSAMDTVTEHLMAV--GMARLGGIGIIH-K-NMDMESQVNEVLKVKNSG-GLRVGAAIGVNE-IERA 110 (361)
T ss_dssp ESSSSCEESSSEEECSSTTTCSHHHHH--HHHHTTCEEEEC-S-SSCHHHHHHHHHHHHHTT-CCCCEEEECTTC-HHHH
T ss_pred ecccccccCCCEEeecCCCCCcHHHHH--HHHHcCCCeEEe-c-CCCHHHHHHHHHHHHhcc-CceEEEEeCCCH-HHHH
Confidence 344566788885555667777653322 234444555443 3 345665554444444332 334445542222 6677
Q ss_pred HHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHH-cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCce
Q 016513 129 DDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNL-VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDC 206 (388)
Q Consensus 129 deI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~-~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~ 206 (388)
+.+++. +|.|.+.-+. +.. ..+...++..++ .+.|+++.+ ..|..+ ...+...|+|+
T Consensus 111 ~~l~eaGad~I~ld~a~-----G~~---~~~~~~i~~i~~~~~~~Vivg~----------v~t~e~---A~~l~~aGaD~ 169 (361)
T 3khj_A 111 KLLVEAGVDVIVLDSAH-----GHS---LNIIRTLKEIKSKMNIDVIVGN----------VVTEEA---TKELIENGADG 169 (361)
T ss_dssp HHHHHTTCSEEEECCSC-----CSB---HHHHHHHHHHHHHCCCEEEEEE----------ECSHHH---HHHHHHTTCSE
T ss_pred HHHHHcCcCeEEEeCCC-----CCc---HHHHHHHHHHHHhcCCcEEEcc----------CCCHHH---HHHHHHcCcCE
Confidence 777776 7888774221 111 122233444443 489988622 234333 45677889999
Q ss_pred eEecc
Q 016513 207 VMLSG 211 (388)
Q Consensus 207 i~Ls~ 211 (388)
|.++.
T Consensus 170 I~VG~ 174 (361)
T 3khj_A 170 IKVGI 174 (361)
T ss_dssp EEECS
T ss_pred EEEec
Confidence 99953
No 289
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=46.39 E-value=54 Score=31.80 Aligned_cols=96 Identities=15% Similarity=0.147 Sum_probs=52.7
Q ss_pred CChhhHHHHHHHHccCCCCceEEEee-cCHHhHhhHHHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCC
Q 016513 94 RKGSDLVNVRKVLGPHAKNIQLMSKV-ENQEGVVNFDDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGK 170 (388)
Q Consensus 94 ~sa~dv~~v~~~l~~~~~~~~IiakI-Et~~av~nldeI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gk 170 (388)
-+.++++.+++.. +.+++.|. -+ .+......+. +|+|.+. .|--..+-+.. -..+..++.++. .-..
T Consensus 204 ~~w~~i~~lr~~~-----~~PvivK~v~~---~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~-~~~~L~~i~~av-~~~i 273 (352)
T 3sgz_A 204 FCWNDLSLLQSIT-----RLPIILKGILT---KEDAELAMKHNVQGIVVSNHGGRQLDEVSA-SIDALREVVAAV-KGKI 273 (352)
T ss_dssp CCHHHHHHHHHHC-----CSCEEEEEECS---HHHHHHHHHTTCSEEEECCGGGTSSCSSCC-HHHHHHHHHHHH-TTSS
T ss_pred CCHHHHHHHHHhc-----CCCEEEEecCc---HHHHHHHHHcCCCEEEEeCCCCCccCCCcc-HHHHHHHHHHHh-CCCC
Confidence 3557788888764 35777774 33 2333333333 7999883 11111111111 111222222222 1257
Q ss_pred CEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 171 PVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 171 pvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
|+|....+- -..|+..++..|+|++++..
T Consensus 274 pVia~GGI~------------~g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 274 EVYMDGGVR------------TGTDVLKALALGARCIFLGR 302 (352)
T ss_dssp EEEEESSCC------------SHHHHHHHHHTTCSEEEESH
T ss_pred eEEEECCCC------------CHHHHHHHHHcCCCEEEECH
Confidence 888755432 24799999999999999964
No 290
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=46.37 E-value=44 Score=31.80 Aligned_cols=116 Identities=13% Similarity=0.125 Sum_probs=69.9
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|.......+...-..|++.+...++. .| .++.+...++.++-...+++
T Consensus 92 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIA-----------MPSTMSVERQMIMKAFGAELILTEGKK---GM-PGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCcEEE
Confidence 4667788999998763 122222344566667799988765431 12 35666555555432221011
Q ss_pred HHHHHHHHhcCCCCCCch--hH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPL--ES-LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~~-ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
. .+. .++. .+ ....+ ++.++++ .+.|++.+-+|.++.-+++ .+|...|+++
T Consensus 157 ~---------~~~-~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigV 216 (343)
T 2pqm_A 157 A---------NQF-GNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAV 216 (343)
T ss_dssp C---------CTT-TCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred C---------CCC-CChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEE
Confidence 0 000 1221 11 34455 8888885 6899999999999876665 4699999999
No 291
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=46.37 E-value=1.8e+02 Score=27.15 Aligned_cols=96 Identities=14% Similarity=0.011 Sum_probs=56.9
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++ -..|++..+ ...+-.|.-+.+ .|-..|+|
T Consensus 39 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGv---------g~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 39 QFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHV---------GCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhCCCC
Confidence 333433 7898875 1112233455555555555555543 246887644 233334554444 46667999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--...-+.+.++..+.|+..+.
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 109 AVSAVTPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99997544333345677888999998887
No 292
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=46.19 E-value=76 Score=27.40 Aligned_cols=106 Identities=15% Similarity=0.182 Sum_probs=61.1
Q ss_pred cCCCCEEEeC--C--CCChhhHHHHHHHHccCCCCceEEEeecCHHhHhh-HHHHHhh-cCceeecCCcccCCCChhhHH
Q 016513 82 PNNIDMIALS--F--VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVN-FDDILRE-TDSFMVARGDLGMEIPVEKIF 155 (388)
Q Consensus 82 ~~g~d~v~~s--f--V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~n-ldeI~~~-~Dgi~igrgDLg~e~~~~~v~ 155 (388)
..|+|++.+- | -...+.++++|+.. .+..+.+-.=...+.+. +++..+. +|++.+. ++. . .
T Consensus 23 ~~~~diie~G~p~~~~~g~~~i~~ir~~~----~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~----~---~ 89 (211)
T 3f4w_A 23 VDDVDIIEVGTPFLIREGVNAIKAIKEKY----PHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT----D---V 89 (211)
T ss_dssp GGGCSEEEECHHHHHHHTTHHHHHHHHHC----TTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS----C---H
T ss_pred hcCccEEEeCcHHHHhccHHHHHHHHHhC----CCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC----C---h
Confidence 3589987764 3 33455666666542 23444443222234444 5666655 7999984 222 1 1
Q ss_pred HHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 156 LAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 156 ~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
.-.+.+++.|+++|+++++. | .+| .|. ...+..+...|+|.+.+.
T Consensus 90 ~~~~~~~~~~~~~g~~~~v~------~-~~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 90 LTIQSCIRAAKEAGKQVVVD------M-ICV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHHHHHHHTCEEEEE------C-TTC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred hHHHHHHHHHHHcCCeEEEE------e-cCC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 23367888899999998852 0 111 122 233466778899998764
No 293
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=46.18 E-value=25 Score=33.31 Aligned_cols=74 Identities=12% Similarity=0.131 Sum_probs=42.2
Q ss_pred CCChhCHHHHHhccccCCCCEEEeCCCC------------------C--------hhhHHHHHHHHccCCCCceEEE--e
Q 016513 67 TLTEKDKEDILRWGVPNNIDMIALSFVR------------------K--------GSDLVNVRKVLGPHAKNIQLMS--K 118 (388)
Q Consensus 67 ~lt~~D~~di~~~~l~~g~d~v~~sfV~------------------s--------a~dv~~v~~~l~~~~~~~~Iia--k 118 (388)
.++..|...+++.+.+.|+|+|.++.-. + .+.+.++++.+ +.++.||+ -
T Consensus 221 ~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~---~~~ipVi~~GG 297 (336)
T 1f76_A 221 DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL---NGRLPIIGVGG 297 (336)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH---TTSSCEEEESS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh---CCCCCEEEECC
Confidence 3555555555477888999999987421 1 13344444444 23466666 4
Q ss_pred ecCHHhHhhHHHHHhhcCceeecCCcc
Q 016513 119 VENQEGVVNFDDILRETDSFMVARGDL 145 (388)
Q Consensus 119 IEt~~av~nldeI~~~~Dgi~igrgDL 145 (388)
|.|.+-+. +.|..-+|++++||+=|
T Consensus 298 I~~~~da~--~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 298 IDSVIAAR--EKIAAGASLVQIYSGFI 322 (336)
T ss_dssp CCSHHHHH--HHHHHTCSEEEESHHHH
T ss_pred CCCHHHHH--HHHHCCCCEEEeeHHHH
Confidence 55554332 22222388888887644
No 294
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=45.95 E-value=60 Score=27.97 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=54.2
Q ss_pred HHHHhccccCCCCEEEeCCC-CChhh----HHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 74 EDILRWGVPNNIDMIALSFV-RKGSD----LVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV-~sa~d----v~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+ +.+.+.|+|+|-+-+- .+.++ ++++++..... .+.++.. +.++...+. +|++.++-+|+.
T Consensus 30 ~~~-~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~--~v~v~v~-------~~~~~a~~~gad~v~l~~~~~~- 98 (215)
T 1xi3_A 30 ESV-REALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREY--DALFFVD-------DRVDVALAVDADGVQLGPEDMP- 98 (215)
T ss_dssp HHH-HHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHT--TCEEEEE-------SCHHHHHHHTCSEEEECTTSCC-
T ss_pred HHH-HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHc--CCeEEEc-------ChHHHHHHcCCCEEEECCccCC-
Confidence 445 7788999999987431 23333 33344443332 3444442 334444444 799998766652
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
.+ .+++ .. .++.+++.. .|..|+ ..+...|+|.+++++
T Consensus 99 ---~~---~~~~-----~~-~~~~~~v~~-----------~t~~e~---~~~~~~g~d~i~~~~ 136 (215)
T 1xi3_A 99 ---IE---VAKE-----IA-PNLIIGASV-----------YSLEEA---LEAEKKGADYLGAGS 136 (215)
T ss_dssp ---HH---HHHH-----HC-TTSEEEEEE-----------SSHHHH---HHHHHHTCSEEEEEC
T ss_pred ---HH---HHHH-----hC-CCCEEEEec-----------CCHHHH---HHHHhcCCCEEEEcC
Confidence 11 1111 11 344444322 233443 446678999999864
No 295
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=45.93 E-value=1e+02 Score=27.33 Aligned_cols=101 Identities=11% Similarity=0.108 Sum_probs=57.2
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee---c----CHHhHhhHHHHHhhcCceeecCCc
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV---E----NQEGVVNFDDILRETDSFMVARGD 144 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI---E----t~~av~nldeI~~~~Dgi~igrgD 144 (388)
|...+.+.+.+.|++.++++-. +.++.+.+.++..+.. ++....-+ + +.+.++.+++.++.. -.+|=|.
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~--~~~~iGE 95 (264)
T 1xwy_A 20 DRDDVVACAFDAGVNGLLITGT-NLRESQQAQKLARQYS-SCWSTAGVHPHDSSQWQAATEEAIIELAAQP--EVVAIGE 95 (264)
T ss_dssp THHHHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHHST-TEEEEECCCGGGGGGCCHHHHHHHHHHHTST--TEEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHhCC-CEEEEEEECCcccccCCHHHHHHHHHHhcCC--CeEEEEE
Confidence 5555547778899999876643 5778877777765543 32211111 1 112344455554321 2234455
Q ss_pred ccCCCChh----hH-HHHHHHHHHHHHHcCCCEEEhh
Q 016513 145 LGMEIPVE----KI-FLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 145 Lg~e~~~~----~v-~~~qk~ii~~c~~~gkpvi~at 176 (388)
.|.+.... +. ...-+..++.|++.|+|+++.|
T Consensus 96 ~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~ 132 (264)
T 1xwy_A 96 CGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHC 132 (264)
T ss_dssp EEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 55554321 11 1233467889999999999865
No 296
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=45.84 E-value=1.6e+02 Score=26.84 Aligned_cols=145 Identities=17% Similarity=0.175 Sum_probs=79.0
Q ss_pred cCeeecCCCccccCCccccCCCCChhCH-HHHHhccccCCCCEE-----EeCCCCChhhHHHHHHHHccCCCCceEEEee
Q 016513 46 NTAMLGERKNVNLPGVVVDLPTLTEKDK-EDILRWGVPNNIDMI-----ALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV 119 (388)
Q Consensus 46 ~~g~l~~~k~vn~p~~~~~~~~lt~~D~-~di~~~~l~~g~d~v-----~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI 119 (388)
++=+|+.++ |-+.+++..-|.++. ..+ +.+...|+|.| .+....+.+++.++-..+.+.-.+.++|.-+
T Consensus 11 ~~~~ig~g~----PkIcvpl~~~t~~e~l~~a-~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~ 85 (258)
T 4h3d_A 11 KNITIGEGR----PKICVPIIGKNKKDIIKEA-KELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTF 85 (258)
T ss_dssp TTEEETSSS----CEEEEEECCSSHHHHHHHH-HHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred cCEEeCCCC----CEEEEEeCCCCHHHHHHHH-HHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 455556544 444454433343332 233 55667788876 3344555566655555554443456677766
Q ss_pred cCH-Hh----------HhhHHHHHhh--cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCC
Q 016513 120 ENQ-EG----------VVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSP 186 (388)
Q Consensus 120 Et~-~a----------v~nldeI~~~--~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~ 186 (388)
=|. +| ++-+.+++.. +|.| |+ |+.. -....+.++..+++.|..+|.+-+=+ +.
T Consensus 86 Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~i-----Dv--El~~--~~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~ 151 (258)
T 4h3d_A 86 RSVVEGGEKLISRDYYTTLNKEISNTGLVDLI-----DV--ELFM--GDEVIDEVVNFAHKKEVKVIISNHDF-----NK 151 (258)
T ss_dssp CCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEE-----EE--EGGG--CHHHHHHHHHHHHHTTCEEEEEEEES-----SC
T ss_pred echhhCCCCCCCHHHHHHHHHHHHhcCCchhh-----HH--hhhc--cHHHHHHHHHHHHhCCCEEEEEEecC-----CC
Confidence 432 11 1112222221 2222 22 2221 22456788889999999999876533 45
Q ss_pred CCChHHHHH-HHHHHHcCCceeEe
Q 016513 187 RPTRAEATD-VANAVLDGTDCVML 209 (388)
Q Consensus 187 ~ptraEv~d-v~~av~~g~d~i~L 209 (388)
.|+..|+.. +..+...|+|.+=+
T Consensus 152 TP~~~el~~~~~~~~~~gaDIvKi 175 (258)
T 4h3d_A 152 TPKKEEIVSRLCRMQELGADLPKI 175 (258)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEE
Confidence 788888754 55567778887655
No 297
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=45.34 E-value=1.3e+02 Score=28.23 Aligned_cols=56 Identities=14% Similarity=0.179 Sum_probs=39.2
Q ss_pred cCCC-EEEhhhHHHHhhcCCCCChHH-HHHHHHHHHcCCceeEeccccCCC----CCHHHHH--------HHHHHHHHHH
Q 016513 168 VGKP-VVTATQMLESMIKSPRPTRAE-ATDVANAVLDGTDCVMLSGESAAG----AYPEIAV--------KIMRRICIEA 233 (388)
Q Consensus 168 ~gkp-vi~atq~lesM~~~~~ptraE-v~dv~~av~~g~d~i~Ls~eta~G----~~P~~~v--------~~~~~i~~~a 233 (388)
.+.| ++++.-. +..+ ...+..++..|++++....-+.-- ..|.+++ +.+++++.+.
T Consensus 220 ~~~P~Vv~aGG~----------~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~ 289 (304)
T 1to3_A 220 INMPWVILSSGV----------DEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEM 289 (304)
T ss_dssp CCSCEEECCTTS----------CTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEecCC----------CHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcC
Confidence 5889 7766532 2222 244667788899999997766555 8898888 8888777653
No 298
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=45.31 E-value=43 Score=32.58 Aligned_cols=98 Identities=13% Similarity=0.073 Sum_probs=55.6
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCC--------------------------hhhHHHHHHHHccCCCCceEEE--
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRK--------------------------GSDLVNVRKVLGPHAKNIQLMS-- 117 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~s--------------------------a~dv~~v~~~l~~~~~~~~Iia-- 117 (388)
|.+++.|..++++.+.+.|+|+|.++.... -+.+.++++.+ +.++.||+
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v---~~~ipvI~~G 305 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALT---QGRVPIIGVG 305 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHT---TTCSCEEEES
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHc---CCCceEEEEC
Confidence 456666777775777889999999885421 13344444444 33567776
Q ss_pred eecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCC
Q 016513 118 KVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGK 170 (388)
Q Consensus 118 kIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gk 170 (388)
-|.|.+-+ .+-|..-+|++++||+=|-- +..-+..+.+.+-....+.|.
T Consensus 306 GI~s~~da--~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 306 GVSSGQDA--LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp SCCSHHHH--HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHH--HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 35554333 22222338999999986521 222334444555544555553
No 299
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=45.27 E-value=1.6e+02 Score=25.97 Aligned_cols=53 Identities=17% Similarity=0.119 Sum_probs=32.5
Q ss_pred CceEEEeec-CH---Hh-HhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 112 NIQLMSKVE-NQ---EG-VVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 112 ~~~IiakIE-t~---~a-v~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
++.+..+.- ++ .+ .+.++..++. +|++.++ |+.. ++ -+++++.|+++|..+++
T Consensus 80 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~----~~----~~~~~~~~~~~g~~~~~ 138 (248)
T 1geq_A 80 STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPV----FH----AKEFTEIAREEGIKTVF 138 (248)
T ss_dssp CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCG----GG----HHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCCh----hh----HHHHHHHHHHhCCCeEE
Confidence 345666663 32 11 2344445554 7999995 5433 33 35678889999988876
No 300
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=44.90 E-value=1.1e+02 Score=27.10 Aligned_cols=103 Identities=14% Similarity=0.208 Sum_probs=55.9
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee------c-CHHhHhhHHHHHhhcCceeecCCc
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV------E-NQEGVVNFDDILRETDSFMVARGD 144 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI------E-t~~av~nldeI~~~~Dgi~igrgD 144 (388)
|.+.+++.+.+.|++.++.+ -.+.++.+.+.++..+.. ++....-+ + +.+.++.+++.+.....-.+|=|.
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~-~~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~iGE 97 (259)
T 1zzm_A 20 DEEASLQRAAQAGVGKIIVP-ATEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGE 97 (259)
T ss_dssp CHHHHHHHHHHTTEEEEEEE-CCSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 44444377888999987765 334677777777665433 32222222 1 223455555555431112234455
Q ss_pred ccCCCChh-hHHHHH----HHHHHHHHHcCCCEEEhh
Q 016513 145 LGMEIPVE-KIFLAQ----KMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 145 Lg~e~~~~-~v~~~q----k~ii~~c~~~gkpvi~at 176 (388)
.|.+.... .-...| +..++.|.+.|+|+++-|
T Consensus 98 iGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 98 IGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 55554221 011233 456777999999999865
No 301
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=44.84 E-value=48 Score=30.71 Aligned_cols=46 Identities=15% Similarity=0.193 Sum_probs=30.9
Q ss_pred CCChHHHHH------HHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHH
Q 016513 187 RPTRAEATD------VANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 187 ~ptraEv~d------v~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
+|.-+...| ...++..|+|.++...-..-...|.++++.+.+-+.+
T Consensus 187 r~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~ 238 (259)
T 3tfx_A 187 RPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNA 238 (259)
T ss_dssp CCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTC
T ss_pred CCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHH
Confidence 565555555 6678999999999977666677899988877765443
No 302
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=44.81 E-value=62 Score=30.76 Aligned_cols=92 Identities=10% Similarity=0.110 Sum_probs=54.3
Q ss_pred hccccCCCCEEEeCCCCChh---------------hHHHHHHHH----ccCCCCceEEEeecCHHhHhhHH----HHHhh
Q 016513 78 RWGVPNNIDMIALSFVRKGS---------------DLVNVRKVL----GPHAKNIQLMSKVENQEGVVNFD----DILRE 134 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~---------------dv~~v~~~l----~~~~~~~~IiakIEt~~av~nld----eI~~~ 134 (388)
+.+++.|+|+|.+=.+.+.. +...+.+.| +.++.+..|+.+ .|.+-++ ++...
T Consensus 129 ~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~~ 204 (309)
T 2aam_A 129 DRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAST 204 (309)
T ss_dssp HHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHHH
T ss_pred HHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHhh
Confidence 57788999999999887543 222222333 555666766654 4666666 77777
Q ss_pred cCceeecCCcc--cCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 135 TDSFMVARGDL--GMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 135 ~Dgi~igrgDL--g~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.||+..---=. .-..+. +-......-+..++++||||+.
T Consensus 205 id~v~~Es~~~~~~~~~~~-~e~~~~~~~l~~~~~~GkpV~~ 245 (309)
T 2aam_A 205 VSGWAVENLFYLKTIPLEE-NETKSRLEYLIRLNRKGKFILS 245 (309)
T ss_dssp CSEEEEESSSEETTEECCH-HHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCEEEeeeEEecCCCCCCH-HHHHHHHHHHHHHHHcCCcEEE
Confidence 88776531100 001121 2222223445677788999986
No 303
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=44.66 E-value=31 Score=27.96 Aligned_cols=42 Identities=14% Similarity=0.304 Sum_probs=33.6
Q ss_pred HHHHHHHHH-HHhcCCcEEEEEcC--------CchHHHHHHhhCCCCcEEEE
Q 016513 259 SLASSAVRT-ANKARAKLIVVLTR--------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 259 ~ia~aAv~~-A~~l~A~aIvv~T~--------sG~tA~~vSk~RP~~pIiav 301 (388)
..+...++. |++.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 105 ~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~-~PVlvV 155 (156)
T 3fg9_A 105 DVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAP-ISVIVV 155 (156)
T ss_dssp CHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCS-SEEEEE
T ss_pred CHHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCC-CCEEEe
Confidence 356666777 88999999999886 2788999988765 999987
No 304
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=44.35 E-value=21 Score=32.51 Aligned_cols=118 Identities=10% Similarity=0.046 Sum_probs=64.9
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcC-ceee-cCC-----cc---cCCCCh----hhHHHHHHHHHH
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETD-SFMV-ARG-----DL---GMEIPV----EKIFLAQKMMIY 163 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~D-gi~i-grg-----DL---g~e~~~----~~v~~~qk~ii~ 163 (388)
-++.+.+.+.+.+..-.++-.-=+++.+..+.++..... +.++ ... ++ ...++. .....+-...++
T Consensus 127 ~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~ 206 (258)
T 2o55_A 127 DHQRLLLLVEKYHMQERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFHYLTKEQVC 206 (258)
T ss_dssp HHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEEGGGCCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCHHHHHHHHHhcCCeEEecChhhcCHHHHH
Confidence 455666666665543345555556666666666543221 2333 111 11 000110 011123367899
Q ss_pred HHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHH
Q 016513 164 KCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 231 (388)
Q Consensus 164 ~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~ 231 (388)
.++++|+++.+-|- .+ .+ -+..+...++..|+|+|+- .||..+.+.+.++|+
T Consensus 207 ~~~~~G~~v~~wTv------~~-~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 207 TAHEKGLSVTVWMP------WI-FD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp HHHHTTCEEEEECC------TT-CC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred HHHHCCCEEEEeeC------CC-CC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 99999999998771 00 11 1223456677889999875 689999888887774
No 305
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=44.32 E-value=22 Score=33.72 Aligned_cols=64 Identities=14% Similarity=0.160 Sum_probs=46.7
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr 142 (388)
.+.+ ..+++.|+|+|.+.. -++++++++++.+....++++|.|= -| .+|+.++++. +|++-+|.
T Consensus 207 lee~-~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~I~AS----GGIt~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 207 LQEA-VQAAEAGADLVLLDN-FKPEELHPTATVLKAQFPSVAVEAS----GGITLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHH-HHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEEE----SSCCTTTHHHHCCTTCCEEECTH
T ss_pred HHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeeEEEE----CCCCHHHHHHHHHCCCCEEEECh
Confidence 3556 677889999999987 4689999988888654455655542 23 4677888776 79888874
No 306
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=44.32 E-value=52 Score=30.91 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=27.2
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 016513 267 TANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 267 ~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav 301 (388)
+-++.+|.+|++--..-..++.+++-= ++|++.+
T Consensus 169 a~~eAGA~~ivlE~vp~~~a~~it~~l-~iP~igI 202 (275)
T 1o66_A 169 AHDDAGAAVVLMECVLAELAKKVTETV-SCPTIGI 202 (275)
T ss_dssp HHHHTTCSEEEEESCCHHHHHHHHHHC-SSCEEEE
T ss_pred HHHHcCCcEEEEecCCHHHHHHHHHhC-CCCEEEE
Confidence 334679999999877667888888776 4999999
No 307
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=44.31 E-value=23 Score=32.84 Aligned_cols=76 Identities=12% Similarity=0.170 Sum_probs=51.5
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEE-EeecCHHhHh--------hHHHHHhh-cCceeecCCcccC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLM-SKVENQEGVV--------NFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Ii-akIEt~~av~--------nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+.+.|.|++.+| +.++..+|+.++ .+..++ +=|- ++|-+ +..+.++. +|.+++||+=++.
T Consensus 169 ~~a~~aG~~GvV~s----a~e~~~iR~~~g---~~fl~VtPGIr-~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I~~a 240 (255)
T 3ldv_A 169 TLTKNAGLDGVVCS----AQEASLLKQHLG---REFKLVTPGIR-PAGSEQGDQRRIMTPAQAIASGSDYLVIGRPITQA 240 (255)
T ss_dssp HHHHHTTCSEEECC----HHHHHHHHHHHC---TTSEEEEECCC-CTTSTTSSCSSSCCHHHHHHTTCSEEEECHHHHTC
T ss_pred HHHHHcCCCEEEEC----HHHHHHHHHhcC---CCcEEEeCCcc-cCcCCccceeccCCHHHHHHcCCCEEEECHHHhCC
Confidence 34557899999866 789999998874 344444 5563 33433 35666655 8999999998887
Q ss_pred CCChhhHHHHHHHH
Q 016513 148 EIPVEKIFLAQKMM 161 (388)
Q Consensus 148 e~~~~~v~~~qk~i 161 (388)
+=|.+....+++.|
T Consensus 241 ~dp~~a~~~i~~ei 254 (255)
T 3ldv_A 241 AHPEVVLEEINSSL 254 (255)
T ss_dssp SCHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhh
Confidence 77766655555443
No 308
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=44.10 E-value=94 Score=29.64 Aligned_cols=129 Identities=16% Similarity=0.163 Sum_probs=66.0
Q ss_pred CCChhCHHHHH-------hccccCCCCEEEeCCC-------------CChhh------------HHHHHHHHccCCCCce
Q 016513 67 TLTEKDKEDIL-------RWGVPNNIDMIALSFV-------------RKGSD------------LVNVRKVLGPHAKNIQ 114 (388)
Q Consensus 67 ~lt~~D~~di~-------~~~l~~g~d~v~~sfV-------------~sa~d------------v~~v~~~l~~~~~~~~ 114 (388)
.+|..|++.++ +++.+.|+|+|=+... +...| +.++.+.+.+.= +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 57777777763 4677899999977533 22211 223333332222 456
Q ss_pred EEEeecCHH------hHhhHHHHHh----h-cCceeecCCcccC-CCChhhHHHHHHHHHHHHH-HcCCCEEEhhhHHHH
Q 016513 115 LMSKVENQE------GVVNFDDILR----E-TDSFMVARGDLGM-EIPVEKIFLAQKMMIYKCN-LVGKPVVTATQMLES 181 (388)
Q Consensus 115 IiakIEt~~------av~nldeI~~----~-~Dgi~igrgDLg~-e~~~~~v~~~qk~ii~~c~-~~gkpvi~atq~les 181 (388)
|..||---+ -+++.-++++ . .|.|-+.-|.+.- .++.. +..+...++..+ ..++|++....+
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~GgI--- 286 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVGLI--- 286 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEESSC---
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeCCC---
Confidence 777884210 1233333333 2 6877775333221 11100 001112222222 358999875432
Q ss_pred hhcCCCCChHHHHHHHHHHHcC-CceeEec
Q 016513 182 MIKSPRPTRAEATDVANAVLDG-TDCVMLS 210 (388)
Q Consensus 182 M~~~~~ptraEv~dv~~av~~g-~d~i~Ls 210 (388)
-|. .+...++..| +|+|++.
T Consensus 287 ------~s~---e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 287 ------TSG---WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp ------CCH---HHHHHHHHTTSCSEEEEC
T ss_pred ------CCH---HHHHHHHHCCCeeEEEec
Confidence 122 3446778888 9999996
No 309
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=43.67 E-value=1.5e+02 Score=27.40 Aligned_cols=96 Identities=13% Similarity=0.080 Sum_probs=55.6
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+ .|-..|+|
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 28 EFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGT---------GGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp HHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCCC
Confidence 334443 6898874 11122334555555555555555432 47887644 233445555444 46677999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..++
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 98 GALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997544333345667788888887664
No 310
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=43.52 E-value=2e+02 Score=26.56 Aligned_cols=112 Identities=17% Similarity=0.197 Sum_probs=66.8
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
+..+|++.|.++.+.. |....-..+...-..|++.+...+ .| .++.+...++.++ +..+ |.
T Consensus 69 lA~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~-----~~-~~~~~~a~~~~~~-~~~~-~~ 129 (318)
T 2rkb_A 69 AAYAARKLGIPATIVL-----------PESTSLQVVQRLQGEGAEVQLTGK-----VW-DEANLRAQELAKR-DGWE-NV 129 (318)
T ss_dssp HHHHHHHHTCCEEEEE-----------CTTCCHHHHHHHHHTTCEEEECCS-----SH-HHHHHHHHHHHHS-TTEE-EC
T ss_pred HHHHHHHcCCCEEEEE-----------CCCCcHHHHHHHHhcCCEEEEECC-----CH-HHHHHHHHHHHHh-cCCE-Ee
Confidence 5667889999987631 222222344555667998777532 23 4565555554432 1111 10
Q ss_pred HHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh-----CCCCcEEEE
Q 016513 241 AVFKEMIRSTPLPMSP--LESLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY-----RPAVPILSV 301 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~-----RP~~pIiav 301 (388)
.+. .++ ...-...+.++.++++ .+.|++.+-+|.|+.-++++ .|...|+++
T Consensus 130 ---------~~~-~n~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~v 189 (318)
T 2rkb_A 130 ---------PPF-DHPLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAM 189 (318)
T ss_dssp ---------CSS-CSHHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEE
T ss_pred ---------CCC-CChhhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEE
Confidence 111 122 2233455677777775 69999999999998766653 288999999
No 311
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=43.43 E-value=58 Score=34.36 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=21.0
Q ss_pred cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcC-CceeEecc
Q 016513 168 VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLSG 211 (388)
Q Consensus 168 ~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g-~d~i~Ls~ 211 (388)
.++|+|....+ -|. .+...++..| +|+|++.-
T Consensus 290 ~~~pvi~~G~i---------~~~---~~a~~~l~~g~aD~V~~gR 322 (729)
T 1o94_A 290 SKKPVLGVGRY---------TDP---EKMIEIVTKGYADIIGCAR 322 (729)
T ss_dssp CSSCEECCSCC---------CCH---HHHHHHHHTTSCSBEEESH
T ss_pred CCCEEEEeCCC---------CCH---HHHHHHHHCCCCCEEEeCc
Confidence 58898865432 222 2346677787 99999963
No 312
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=43.11 E-value=1.1e+02 Score=27.39 Aligned_cols=102 Identities=17% Similarity=0.126 Sum_probs=58.8
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeec-------CHHhHhhHHHHHhhcCceeecCC
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVE-------NQEGVVNFDDILRETDSFMVARG 143 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIE-------t~~av~nldeI~~~~Dgi~igrg 143 (388)
.|..++++.+-+.|++.++++-. +.++-+.+.++..+.. ++....-+= +.+.++.+++.+. +.-.+|-|
T Consensus 27 ~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~--~~~~~~iG 102 (268)
T 1j6o_A 27 DDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD-RIFCSVGVHPHDAKEVPEDFIEHLEKFAK--DEKVVAIG 102 (268)
T ss_dssp TTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT-TEEEEECCCGGGGGGCCTTHHHHHHHHTT--STTEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEeeccccccccCHHHHHHHHHHhc--cCCEEEEE
Confidence 46666657777899998777543 6777777777775543 332222221 0123444444432 22344446
Q ss_pred cccCCCCh-----hhHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 144 DLGMEIPV-----EKIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 144 DLg~e~~~-----~~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
..|++... +.=...-...++.|.+.|+|+++-+
T Consensus 103 e~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~ 140 (268)
T 1j6o_A 103 ETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHI 140 (268)
T ss_dssp EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 55555432 1111233577889999999999865
No 313
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=43.09 E-value=22 Score=28.20 Aligned_cols=41 Identities=15% Similarity=-0.001 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTRGGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~sG~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|.+.+++.||+-++.-+++..+.+.-| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 45666778889999988887764467888888776 999976
No 314
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=43.06 E-value=14 Score=35.48 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=44.0
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr 142 (388)
.+.+ +.+++.|+|+|.+-.. ++++++++++.+. .++.|.| --| .+|+.++++. +|+|-+|.
T Consensus 241 ldea-~eAl~aGaD~I~LDn~-~~~~l~~av~~l~---~~v~iea----SGGIt~~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 241 LAEL-EEAISAGADIIMLDNF-SLEMMREAVKINA---GRAALEN----SGNITLDNLKECAETGVDYISVGA 304 (320)
T ss_dssp HHHH-HHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TSSEEEE----ESSCCHHHHHHHHTTTCSEEECTH
T ss_pred HHHH-HHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE----ECCCCHHHHHHHHHcCCCEEEECc
Confidence 4556 6788899999999874 7888998888875 2444433 223 4677788876 79998873
No 315
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=43.00 E-value=64 Score=32.27 Aligned_cols=89 Identities=12% Similarity=0.156 Sum_probs=49.8
Q ss_pred Cce-EEEeecCHHhHhhHHHHHhh-----cCceeecCC-----cc---cCCCC-h--hhHHHHHHHHHHHHHH-c--CCC
Q 016513 112 NIQ-LMSKVENQEGVVNFDDILRE-----TDSFMVARG-----DL---GMEIP-V--EKIFLAQKMMIYKCNL-V--GKP 171 (388)
Q Consensus 112 ~~~-IiakIEt~~av~nldeI~~~-----~Dgi~igrg-----DL---g~e~~-~--~~v~~~qk~ii~~c~~-~--gkp 171 (388)
+.+ |+.||=---..+++.+|++. +|||.+.-+ |+ ..+.+ + ..+....-+++...++ . ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 566 89999321122355555543 688877633 21 11111 1 1122222344444444 4 789
Q ss_pred EEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccc
Q 016513 172 VVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 172 vi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~e 212 (388)
+|....+. ...|+..++..|||+|++..-
T Consensus 376 VIg~GGI~------------s~~DA~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 376 IIASGGIF------------SGLDALEKIEAGASVCQLYSC 404 (443)
T ss_dssp EEEESSCC------------SHHHHHHHHHTTEEEEEESHH
T ss_pred EEEECCCC------------CHHHHHHHHHcCCCEEEEcHH
Confidence 88765433 345778999999999999643
No 316
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=42.82 E-value=42 Score=29.58 Aligned_cols=80 Identities=13% Similarity=0.021 Sum_probs=47.1
Q ss_pred hccccCCCCEEEeCCCC--------ChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 78 RWGVPNNIDMIALSFVR--------KGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~--------sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+.+.+.|+|+|.+..+. +.+.++++++.. ++++++ =|.+ .+|+.+.++. +||+++|++=+.
T Consensus 161 ~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~-----~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 161 KEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV-----RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC-----SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc-----CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHHc
Confidence 67778899999874433 234455555442 345554 2333 3566666665 899999986554
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCE
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPV 172 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpv 172 (388)
...+.+ .+.+..+++|.++
T Consensus 233 ~~~~~~-------~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 233 RVLSIA-------QVKRYLKERGVEV 251 (253)
T ss_dssp TSSCHH-------HHHHHHHHTTCBC
T ss_pred CCCCHH-------HHHHHHHHcCCCC
Confidence 444432 3344456666653
No 317
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=42.40 E-value=47 Score=26.19 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC------chHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTRG------GTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~s------G~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|.+.+++.||+-++. |.++..+.+.-| |||+.+
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~~-~pVlvv 136 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIK-IDMLVV 136 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcCC-CCEEEe
Confidence 56666788899999999998762 356777776654 999998
No 318
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=42.37 E-value=39 Score=27.99 Aligned_cols=41 Identities=20% Similarity=0.380 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|.+.+++.||+-++ -|.++..+.+.-| |||+.+
T Consensus 112 ~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv 161 (175)
T 2gm3_A 112 PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTI 161 (175)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEE
Confidence 4556677888999999999885 2567888888875 999999
No 319
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=41.90 E-value=1.1e+02 Score=28.31 Aligned_cols=117 Identities=11% Similarity=0.102 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|.......+...-..|++.+...++. .| .++.+...++.++-...+++
T Consensus 76 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---GM-KGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCCEEE
Confidence 4566788999998763 122222334566667799987765431 12 35655555554332111011
Q ss_pred HHHHHHHHhcCCCCCCch--hH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----C-CCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPL--ES-LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----R-PAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~~-ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----R-P~~pIiav 301 (388)
. .+. .++. .. ....+.++.++++ .+.|++.+-+|.++.-++++ + |...|+++
T Consensus 141 ~---------~~~-~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~v 202 (316)
T 1y7l_A 141 L---------KQF-ENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAV 202 (316)
T ss_dssp C---------CTT-TCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEE
T ss_pred C---------CCC-CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEE
Confidence 0 000 1222 11 2345678888875 68999999999998766653 4 99999999
No 320
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=41.65 E-value=58 Score=26.63 Aligned_cols=42 Identities=24% Similarity=0.245 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 259 SLASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 259 ~ia~aAv~~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
..+...++.|++.+++.||+-++ -|.++..+.+.- +|||+.+
T Consensus 104 ~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a-~~PVLvV 154 (155)
T 3dlo_A 104 EPPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKA-NKPVICI 154 (155)
T ss_dssp CHHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHC-SSCEEEE
T ss_pred CHHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhC-CCCEEEe
Confidence 35667778889999999999874 388999998866 5999987
No 321
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=41.65 E-value=40 Score=30.06 Aligned_cols=43 Identities=14% Similarity=0.045 Sum_probs=26.5
Q ss_pred HcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc-----C-CceeEeccccCCCCCHHH
Q 016513 167 LVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-----G-TDCVMLSGESAAGAYPEI 221 (388)
Q Consensus 167 ~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~-----g-~d~i~Ls~eta~G~~P~~ 221 (388)
...+|++... ..-+..+ +...... | +|+++...=--.|+++.+
T Consensus 186 ~~~iPvia~G---------GI~~~~d---~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~ 234 (241)
T 1qo2_A 186 EAEVKVLAAG---------GISSENS---LKTAQKVHTETNGLLKGVIVGRAFLEGILTVE 234 (241)
T ss_dssp HHTCEEEEES---------SCCSHHH---HHHHHHHHHHTTTSEEEEEECHHHHTTSSCHH
T ss_pred hcCCcEEEEC---------CCCCHHH---HHHHHhcccccCCeEeEEEeeHHHHcCCCCHH
Confidence 3489998643 3444444 4444444 9 999999755555666544
No 322
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=41.63 E-value=1.4e+02 Score=28.55 Aligned_cols=129 Identities=16% Similarity=0.192 Sum_probs=65.8
Q ss_pred CCChhCHHHHH-------hccccCCCCEEEeC---------C----CCChhh------------HHHHHHHHc-cCCCCc
Q 016513 67 TLTEKDKEDIL-------RWGVPNNIDMIALS---------F----VRKGSD------------LVNVRKVLG-PHAKNI 113 (388)
Q Consensus 67 ~lt~~D~~di~-------~~~l~~g~d~v~~s---------f----V~sa~d------------v~~v~~~l~-~~~~~~ 113 (388)
.+|..|++.++ +++.++|+|+|=+. | .+...| +.++.+.+. ..+.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 57777777663 46778999998775 2 222211 233333333 335677
Q ss_pred eEEEeecCHH------hHhhHHHHHh----hcCceeecCCcccC-CCC-hhhHHHHHHHHHHHHH-HcCCCEEEhhhHHH
Q 016513 114 QLMSKVENQE------GVVNFDDILR----ETDSFMVARGDLGM-EIP-VEKIFLAQKMMIYKCN-LVGKPVVTATQMLE 180 (388)
Q Consensus 114 ~IiakIEt~~------av~nldeI~~----~~Dgi~igrgDLg~-e~~-~~~v~~~qk~ii~~c~-~~gkpvi~atq~le 180 (388)
.|..||---+ .+++.-++++ ..|.|-+.-|...- ..+ .+. .+-..++..+ ..++|++....+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~~~---~~~~~~~~ir~~~~iPVi~~Ggi-- 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPG---YQVKYAETIKKRCNIKTSAVGLI-- 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTT---TTHHHHHHHHHHHTCEEEEESSC--
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeecccCc---eeehHHHHHHHhcCcccceeeee--
Confidence 8888884211 1233333333 25777664333211 111 011 1112222222 347998875432
Q ss_pred HhhcCCCCChHHHHHHHHHHHcC-CceeEec
Q 016513 181 SMIKSPRPTRAEATDVANAVLDG-TDCVMLS 210 (388)
Q Consensus 181 sM~~~~~ptraEv~dv~~av~~g-~d~i~Ls 210 (388)
-|. .+...++..| +|+|++.
T Consensus 287 -------~t~---e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 -------TTQ---ELAEEILSNERADLVALG 307 (343)
T ss_dssp -------CCH---HHHHHHHHTTSCSEEEES
T ss_pred -------eHH---HHHHHHHhchhhHHHHHH
Confidence 122 2345677888 9999996
No 323
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=41.57 E-value=1.5e+02 Score=27.37 Aligned_cols=113 Identities=17% Similarity=0.198 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|....-..+...-..|++.+...+. | .++.+...++.++- ..++.
T Consensus 79 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~-~~~~~ 140 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVV-----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEET-GYALI 140 (311)
T ss_dssp HHHHHHHHHTCCEEEE-----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHH-CCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhc-CcEec
Confidence 4566788999998763 12222222456666779987654332 3 24566555555432 11110
Q ss_pred HHHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSP--LESLASSAVRTANKA-----RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l-----~A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
.+.. ++ .......+.++.+++ +.+.|++.+-+|.|+--+++ ..|...|+++
T Consensus 141 ----------~~~~-n~~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigv 202 (311)
T 1ve5_A 141 ----------HPFD-DPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGV 202 (311)
T ss_dssp ----------CSSS-SHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ----------CCCC-CcchhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 0110 11 122344456666665 47899999999999776664 3699999999
No 324
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=41.34 E-value=1.1e+02 Score=28.32 Aligned_cols=111 Identities=12% Similarity=0.220 Sum_probs=60.9
Q ss_pred hccccCCCCEE--EeCC---------CCChh-----------hHHHHHHHHccCCCCceEEEee-cCH---HhHhhHHHH
Q 016513 78 RWGVPNNIDMI--ALSF---------VRKGS-----------DLVNVRKVLGPHAKNIQLMSKV-ENQ---EGVVNFDDI 131 (388)
Q Consensus 78 ~~~l~~g~d~v--~~sf---------V~sa~-----------dv~~v~~~l~~~~~~~~IiakI-Et~---~av~nldeI 131 (388)
+...+.|+|+| -+|| ++.+. ++-++.+.+++.+.+++++.+. .++ -|++++-+-
T Consensus 41 ~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~ 120 (271)
T 3nav_A 41 QTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQR 120 (271)
T ss_dssp HHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHH
T ss_pred HHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHH
Confidence 55557899964 5677 33211 1222223333333466776652 232 366655444
Q ss_pred Hh-h-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 132 LR-E-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 132 ~~-~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
+. + +||+++. ++|.++ .......|+++|...+.- -.|..+.. .+......+.+.+.+
T Consensus 121 ~~~aGvdGvIip------Dlp~ee----~~~~~~~~~~~gl~~I~l--------vap~t~~e---ri~~i~~~~~gfiY~ 179 (271)
T 3nav_A 121 CQKAGVDSVLIA------DVPTNE----SQPFVAAAEKFGIQPIFI--------APPTASDE---TLRAVAQLGKGYTYL 179 (271)
T ss_dssp HHHHTCCEEEET------TSCGGG----CHHHHHHHHHTTCEEEEE--------ECTTCCHH---HHHHHHHHCCSCEEE
T ss_pred HHHCCCCEEEEC------CCCHHH----HHHHHHHHHHcCCeEEEE--------ECCCCCHH---HHHHHHHHCCCeEEE
Confidence 43 3 7999994 566655 456788999999875531 13333333 334445556666665
No 325
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=41.20 E-value=1.7e+02 Score=28.01 Aligned_cols=96 Identities=14% Similarity=0.189 Sum_probs=55.8
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+-.++. +|||++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+. |-..|+|
T Consensus 59 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 59 DDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR-RVPVLIGT---------GGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCCC
Confidence 334443 7898874 11122344555555555555555432 46887644 2344455655444 5667999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..++
T Consensus 129 avlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 129 GIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997544333345667778888876654
No 326
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=41.16 E-value=3e+02 Score=28.12 Aligned_cols=186 Identities=15% Similarity=0.044 Sum_probs=107.7
Q ss_pred CCChhCHHHHHhccccCCCCEEEeCC----CC-----ChhhHHHHHHHHccCCCCceEEEeec--CHHhH---------h
Q 016513 67 TLTEKDKEDILRWGVPNNIDMIALSF----VR-----KGSDLVNVRKVLGPHAKNIQLMSKVE--NQEGV---------V 126 (388)
Q Consensus 67 ~lt~~D~~di~~~~l~~g~d~v~~sf----V~-----sa~dv~~v~~~l~~~~~~~~IiakIE--t~~av---------~ 126 (388)
.++..|+..|.+...+.|++.|=+-+ +. +.++-+.++.+... .+++.+.+.+= +..|. .
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~-~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKL-MPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHH-CTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHh-CCCCEEEEEeccccccCcccCcccccHH
Confidence 45666766664666678999987753 11 45555555554432 24566666551 11122 2
Q ss_pred hHHHHHhh-cCc--eeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHc
Q 016513 127 NFDDILRE-TDS--FMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLD 202 (388)
Q Consensus 127 nldeI~~~-~Dg--i~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~ 202 (388)
+++..++. .|. |+.+-.|+ .-.+..++.++++|+.+-.+= |+...+.=+...+.+++. +...
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDP----------RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEEEehhHH----------HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHHc
Confidence 23444443 463 33333343 224688899999999872110 122333335666667666 5667
Q ss_pred CCceeEeccccCCCCCHHHHHHHHHHHHHHH--hcccchHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEc
Q 016513 203 GTDCVMLSGESAAGAYPEIAVKIMRRICIEA--ESSLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLT 280 (388)
Q Consensus 203 g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~a--E~~~~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T 280 (388)
|+|.|.| .+|+=+-.|-++-+.+..+.++. .-.+... .+. ..-+|.+...+|-+.+|+ +|=-|
T Consensus 188 Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H-------~Hn------d~GlAvAN~laAveAGa~-~VD~t 252 (539)
T 1rqb_A 188 GADSIAL-KDMAALLKPQPAYDIIKAIKDTYGQKTQINLH-------CHS------TTGVTEVSLMKAIEAGVD-VVDTA 252 (539)
T ss_dssp TCSEEEE-EETTCCCCHHHHHHHHHHHHHHHCTTCCEEEE-------EBC------TTSCHHHHHHHHHHTTCS-EEEEB
T ss_pred CCCEEEe-CCCCCCcCHHHHHHHHHHHHHhcCCCceEEEE-------eCC------CCChHHHHHHHHHHhCCC-EEEEe
Confidence 9999999 48888888999888888887655 2111110 011 123566677778888998 44445
Q ss_pred CC
Q 016513 281 RG 282 (388)
Q Consensus 281 ~s 282 (388)
-.
T Consensus 253 i~ 254 (539)
T 1rqb_A 253 IS 254 (539)
T ss_dssp CG
T ss_pred cc
Confidence 33
No 327
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=41.16 E-value=1.7e+02 Score=27.80 Aligned_cols=96 Identities=16% Similarity=0.057 Sum_probs=55.5
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+..++. +|||++. ---=+..+..++-..+.+..++.++. ..|++..+- ..+-.|.-+.+. |-..|+|
T Consensus 62 ~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g-rvpViaGvg---------~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 62 ARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG-RRTLMAGIG---------ALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEEC---------CSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CCCHHHHHHHHHHHHhcCCC
Confidence 334443 7998874 11122334555555555555555432 478876442 333445554444 6667999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..++
T Consensus 132 avlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 132 ALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp EEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997544333334667778888887665
No 328
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=41.12 E-value=38 Score=32.06 Aligned_cols=61 Identities=11% Similarity=0.132 Sum_probs=42.5
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr 142 (388)
.+.+ +.+++.|+|+|.+.. -+.++++++++.+. .+++|.| .-| .+|+.++++. +|+|-+|.
T Consensus 218 lee~-~eA~~aGaD~I~ld~-~~~e~l~~~v~~~~---~~~~I~A----SGGIt~~~i~~~a~~GvD~isvGs 281 (296)
T 1qap_A 218 LDEL-DDALKAGADIIMLDN-FNTDQMREAVKRVN---GQARLEV----SGNVTAETLREFAETGVDFISVGA 281 (296)
T ss_dssp HHHH-HHHHHTTCSEEEESS-CCHHHHHHHHHTTC---TTCCEEE----CCCSCHHHHHHHHHTTCSEEECSH
T ss_pred HHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhC---CCCeEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 4556 677899999999987 67788888887664 2344433 223 4667777766 79888874
No 329
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=41.06 E-value=1.4e+02 Score=28.00 Aligned_cols=91 Identities=16% Similarity=0.148 Sum_probs=55.3
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHH-HHHHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATD-VANAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~d-v~~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+ ...|-..|+|++|+..=
T Consensus 58 v~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 58 TNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG-RIPVIAGT---------GANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp CCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 7999884 11222344555655555556555532 36887654 2333445544 44567789999999754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhc
Q 016513 213 SAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
--..--+.+.++..+.|+..+.-
T Consensus 128 ~y~~~s~~~l~~~f~~va~a~~l 150 (314)
T 3qze_A 128 YYNKPTQEGMYQHFRHIAEAVAI 150 (314)
T ss_dssp CSSCCCHHHHHHHHHHHHHHSCS
T ss_pred CCCCCCHHHHHHHHHHHHHhcCC
Confidence 33333456788888888887753
No 330
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=41.00 E-value=43 Score=31.32 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=26.2
Q ss_pred HHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHH
Q 016513 195 DVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 231 (388)
Q Consensus 195 dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~ 231 (388)
|+..+...|+|++++..---....|.++++.+.+.+.
T Consensus 223 d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~ 259 (305)
T 2nv1_A 223 DAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATT 259 (305)
T ss_dssp HHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHH
Confidence 5667777899999997655444568777766665543
No 331
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=40.75 E-value=1.6e+02 Score=27.37 Aligned_cols=91 Identities=15% Similarity=0.100 Sum_probs=54.7
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHH-HHHHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATD-VANAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~d-v~~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+ ...|-..|+|++|+..=
T Consensus 42 v~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 42 TDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK-RVPVIAGT---------GANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 6998884 11112344555555555555555542 36887644 2334445544 44577789999999754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhc
Q 016513 213 SAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
--..--+.+.++..+.|+..+.-
T Consensus 112 ~y~~~~~~~l~~~f~~va~a~~l 134 (297)
T 3flu_A 112 YYNKPSQEGIYQHFKTIAEATSI 134 (297)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCHHHHHHHHHHHHHhCCC
Confidence 43333356778888888877653
No 332
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=40.69 E-value=2e+02 Score=26.61 Aligned_cols=128 Identities=13% Similarity=0.116 Sum_probs=74.5
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCC-------------CChhhHHHHHHHHccCCCCceEEEeecC------HHhHhhHH
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFV-------------RKGSDLVNVRKVLGPHAKNIQLMSKVEN------QEGVVNFD 129 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV-------------~sa~dv~~v~~~l~~~~~~~~IiakIEt------~~av~nld 129 (388)
|.+|..-- +.+-+.|+|.|.+..- -|.+|+..-.+.+.+..+...+++=.+- .++++|..
T Consensus 23 tayD~~sA-~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~ 101 (264)
T 1m3u_A 23 TAYDYSFA-KLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAA 101 (264)
T ss_dssp ECCSHHHH-HHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHH
T ss_pred eCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHH
Confidence 55676665 6667789999988631 1224444333334333445677777664 45778888
Q ss_pred HHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEE----EhhhHHHHh---hcCCCCChH---H-HHHHH
Q 016513 130 DILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV----TATQMLESM---IKSPRPTRA---E-ATDVA 197 (388)
Q Consensus 130 eI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi----~atq~lesM---~~~~~ptra---E-v~dv~ 197 (388)
.+++. ++++-+-=|+ -+-..|+++.++|.||+ +.-|-...+ ....+ |.+ + +.|..
T Consensus 102 rl~kaGa~aVklEgg~------------e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~gr-t~~~a~~~i~rA~ 168 (264)
T 1m3u_A 102 TVMRAGANMVKIEGGE------------WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGR-GDEAGDQLLSDAL 168 (264)
T ss_dssp HHHHTTCSEEECCCSG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCC-SHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEECCcH------------HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeC-CHHHHHHHHHHHH
Confidence 88875 6788774331 22344666678999986 333322222 11122 211 1 24555
Q ss_pred HHHHcCCceeEec
Q 016513 198 NAVLDGTDCVMLS 210 (388)
Q Consensus 198 ~av~~g~d~i~Ls 210 (388)
.....|+|+++|-
T Consensus 169 a~~eAGA~~ivlE 181 (264)
T 1m3u_A 169 ALEAAGAQLLVLE 181 (264)
T ss_dssp HHHHHTCCEEEEE
T ss_pred HHHHCCCcEEEEe
Confidence 6777899999884
No 333
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=40.56 E-value=25 Score=31.59 Aligned_cols=82 Identities=15% Similarity=0.022 Sum_probs=53.3
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEE-EeecCHHhHhhHHHHHhh-cCceeecCCcccCCCC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLM-SKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIP 150 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Ii-akIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~ 150 (388)
...+++.+.+.|+|++.+|- ..++++..+|+.++. ..++ .-|= +++- ++.+.++. +|.+++||+=+..+=|
T Consensus 117 v~~~a~~a~~~G~~GvV~sa-t~~~e~~~ir~~~~~----f~~v~pGI~-~~g~-~~~~a~~~Gad~iVvGr~I~~a~dp 189 (215)
T 3ve9_A 117 YPYLREVARRVNPKGFVAPA-TRPSMISRVKGDFPD----KLVISPGVG-TQGA-KPGIALCHGADYEIVGRSVYQSADP 189 (215)
T ss_dssp HHHHHHHHHHHCCSEEECCT-TSHHHHHHHHHHCTT----SEEEECCTT-STTC-CTTHHHHTTCSEEEECHHHHTSSSH
T ss_pred HHHHHHHHHHcCCCceeeCC-CCHHHHHHHHHhCCC----cEEEcCCCC-cCcC-CHHHHHHcCCCEEEeCHHHcCCCCH
Confidence 34444778889999998763 447889988887642 2333 4442 1221 35454544 8999999999988877
Q ss_pred hhhHHHHHHHH
Q 016513 151 VEKIFLAQKMM 161 (388)
Q Consensus 151 ~~~v~~~qk~i 161 (388)
.+....+++.+
T Consensus 190 ~~a~~~i~~~i 200 (215)
T 3ve9_A 190 VRKLEEIVRSQ 200 (215)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66555555444
No 334
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=40.20 E-value=1.6e+02 Score=27.36 Aligned_cols=113 Identities=18% Similarity=0.202 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+.. |....-..+...-..|++.+...+. | .++.+...++.++-. .++-
T Consensus 88 alA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~-~~~i 149 (323)
T 1v71_A 88 AIALSAKILGIPAKIIM-----------PLDAPEAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREG-LTII 149 (323)
T ss_dssp HHHHHHHHTTCCEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHT-CBCC
T ss_pred HHHHHHHHcCCCEEEEC-----------CCCCcHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-CEec
Confidence 45667899999987631 2111123456667779998766543 2 134555555544321 1110
Q ss_pred HHHHHHHHhcCCCCCCc--hhHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSP--LESLASSAVRTANKA-RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~ia~aAv~~A~~l-~A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
.+. .++ .......+.++.+++ +.+.|++.+-+|.|+--+++ ++|...|+++
T Consensus 150 ----------~~~-~n~~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigv 207 (323)
T 1v71_A 150 ----------PPY-DHPHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGV 207 (323)
T ss_dssp ----------CSS-SSHHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ----------CCC-CCcchhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEE
Confidence 000 111 122334467777776 48999999999999876665 4699999999
No 335
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=40.10 E-value=39 Score=33.89 Aligned_cols=69 Identities=12% Similarity=0.175 Sum_probs=40.5
Q ss_pred HHHHHhccccCCCCEEEeCC---------------CCChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhhc
Q 016513 73 KEDILRWGVPNNIDMIALSF---------------VRKGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRET 135 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sf---------------V~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~~ 135 (388)
.++. +.+.+.|+|+|.++. ..+.+-+.++++.+.. .++.+|+ .|-+..-+ ...+..-+
T Consensus 289 ~e~a-~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~--~~ipvia~GGI~~~~di--~kala~GA 363 (494)
T 1vrd_A 289 PEGT-EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARK--YDVPIIADGGIRYSGDI--VKALAAGA 363 (494)
T ss_dssp HHHH-HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHT--TTCCEEEESCCCSHHHH--HHHHHTTC
T ss_pred HHHH-HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhh--cCCCEEEECCcCCHHHH--HHHHHcCC
Confidence 4455 566778899888854 2233344444444432 2577888 77665544 22233238
Q ss_pred CceeecCCccc
Q 016513 136 DSFMVARGDLG 146 (388)
Q Consensus 136 Dgi~igrgDLg 146 (388)
|++++||.=++
T Consensus 364 d~V~iGr~~l~ 374 (494)
T 1vrd_A 364 ESVMVGSIFAG 374 (494)
T ss_dssp SEEEESHHHHT
T ss_pred CEEEECHHHhc
Confidence 99999887554
No 336
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=39.99 E-value=1.6e+02 Score=28.57 Aligned_cols=122 Identities=11% Similarity=0.034 Sum_probs=63.4
Q ss_pred CCChhCHHHH-------HhccccCCCCEEEe-------------CCCCChhh----------------HHHHHHHHccCC
Q 016513 67 TLTEKDKEDI-------LRWGVPNNIDMIAL-------------SFVRKGSD----------------LVNVRKVLGPHA 110 (388)
Q Consensus 67 ~lt~~D~~di-------~~~~l~~g~d~v~~-------------sfV~sa~d----------------v~~v~~~l~~~~ 110 (388)
.+|..|++.+ ++.+.+.|+|+|=+ |..+...| ++.+|+.+ +
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---g 231 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVF---G 231 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHc---C
Confidence 4666666555 24667899999987 44333333 34444444 3
Q ss_pred CCceEEEeecC---H------HhHhhHHHHHhh-----cCceeecCCcccCCCChhhHHHHHHHHHHH-HHHcCCCEEEh
Q 016513 111 KNIQLMSKVEN---Q------EGVVNFDDILRE-----TDSFMVARGDLGMEIPVEKIFLAQKMMIYK-CNLVGKPVVTA 175 (388)
Q Consensus 111 ~~~~IiakIEt---~------~av~nldeI~~~-----~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~-c~~~gkpvi~a 175 (388)
.+ .|..||-. . ...+..-++++. .|.|-+..|......+.. +...++. .+..++|++..
T Consensus 232 ~~-~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~-----~~~~~~~ik~~~~iPvi~~ 305 (377)
T 2r14_A 232 PE-RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITY-----PEGFREQMRQRFKGGLIYC 305 (377)
T ss_dssp GG-GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CC-----CTTHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcc-----hHHHHHHHHHHCCCCEEEE
Confidence 34 68888821 1 112333333332 577777554321100100 1112222 23457898875
Q ss_pred hhHHHHhhcCCCCChHHHHHHHHHHHcC-CceeEec
Q 016513 176 TQMLESMIKSPRPTRAEATDVANAVLDG-TDCVMLS 210 (388)
Q Consensus 176 tq~lesM~~~~~ptraEv~dv~~av~~g-~d~i~Ls 210 (388)
.. . + ..+...++..| +|+|++.
T Consensus 306 Gg---------i-~---~~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 306 GN---------Y-D---AGRAQARLDDNTADAVAFG 328 (377)
T ss_dssp SS---------C-C---HHHHHHHHHTTSCSEEEES
T ss_pred CC---------C-C---HHHHHHHHHCCCceEEeec
Confidence 42 2 3 23456778888 9999996
No 337
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=39.97 E-value=93 Score=28.81 Aligned_cols=98 Identities=11% Similarity=-0.040 Sum_probs=49.8
Q ss_pred CChhCHHHHHhccccCCCCEEEeCCCC-------------------------C----hhhHHHHHHHHccCCCCceEEEe
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSFVR-------------------------K----GSDLVNVRKVLGPHAKNIQLMSK 118 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sfV~-------------------------s----a~dv~~v~~~l~~~~~~~~Iiak 118 (388)
++..+...+++.+.+.|+|+|.++.-- . +..++.++++-+..+.++.||+-
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 444455454477788999999887531 0 01233344333333335676653
Q ss_pred --ecCHHhHhhHHHHHh-hcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCC
Q 016513 119 --VENQEGVVNFDDILR-ETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGK 170 (388)
Q Consensus 119 --IEt~~av~nldeI~~-~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gk 170 (388)
|.|++-+ .+.+. -+|++++||+=|. -+..-+..+.+.+-....+.|.
T Consensus 249 GGI~~~~da---~~~l~~GAd~V~vg~~~l~--~~p~~~~~i~~~l~~~l~~~g~ 298 (311)
T 1jub_A 249 GGIETGQDA---FEHLLCGATMLQIGTALHK--EGPAIFDRIIKELEEIMNQKGY 298 (311)
T ss_dssp SSCCSHHHH---HHHHHHTCSEEEECHHHHH--HCTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHH---HHHHHcCCCEEEEchHHHh--cCcHHHHHHHHHHHHHHHHcCC
Confidence 4443222 22222 3899999988663 0112233344444444444443
No 338
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=39.82 E-value=65 Score=31.31 Aligned_cols=93 Identities=6% Similarity=0.114 Sum_probs=56.7
Q ss_pred HhccccCCCCEEEeCC------CCChhhHHHH-HHHHccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 77 LRWGVPNNIDMIALSF------VRKGSDLVNV-RKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 77 ~~~~l~~g~d~v~~sf------V~sa~dv~~v-~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+++.++.|+|++++.= .-|.++=+++ +......+.++.+|+-+= |.++++....-.+. +|++++-+-.+
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY 165 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY 165 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 3788899999998732 1133343333 334444566789999873 56666665555554 79988875544
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
. ..+.+.+...-+.|.++ .|+++.
T Consensus 166 ~-k~sq~gl~~hf~~IA~a-----~PiilY 189 (360)
T 4dpp_A 166 G-KTSIEGLIAHFQSVLHM-----GPTIIY 189 (360)
T ss_dssp S-CCCHHHHHHHHHTTGGG-----SCEEEE
T ss_pred C-CCCHHHHHHHHHHHHHh-----CCEEEE
Confidence 2 23445666666666542 488763
No 339
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=39.79 E-value=53 Score=31.62 Aligned_cols=71 Identities=13% Similarity=0.026 Sum_probs=43.4
Q ss_pred CHHHHHhccccCCCCEEEeCCCC---------------ChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh
Q 016513 72 DKEDILRWGVPNNIDMIALSFVR---------------KGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE 134 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~---------------sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~ 134 (388)
+.++. +.+.++|+|+|.++.-. +..-+.++.+.... .++.+|+ -|-|...+ ...+..=
T Consensus 171 t~e~A-~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~--~~ipvIa~GGI~~g~di--~kAlalG 245 (351)
T 2c6q_A 171 TGEMV-EELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG--LKGHIISDGGCSCPGDV--AKAFGAG 245 (351)
T ss_dssp SHHHH-HHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH--TTCEEEEESCCCSHHHH--HHHHHTT
T ss_pred CHHHH-HHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhh--cCCcEEEeCCCCCHHHH--HHHHHcC
Confidence 45666 77889999999887421 11223344444332 2478888 66665444 4444444
Q ss_pred cCceeecCCcccC
Q 016513 135 TDSFMVARGDLGM 147 (388)
Q Consensus 135 ~Dgi~igrgDLg~ 147 (388)
+|++++|+.=|..
T Consensus 246 A~~V~vG~~fl~~ 258 (351)
T 2c6q_A 246 ADFVMLGGMLAGH 258 (351)
T ss_dssp CSEEEESTTTTTB
T ss_pred CCceeccHHHhcC
Confidence 8999999876653
No 340
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=39.74 E-value=55 Score=29.65 Aligned_cols=67 Identities=12% Similarity=0.185 Sum_probs=46.1
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-++.+++.+.+.|.++.+.+.-+... -+|++++++-.|.|+.+-++ +.....+.+.|++.|+|.+.+
T Consensus 86 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 86 KVESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 45666677777677776655433332 25778888888988876332 235678888999999998864
No 341
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=39.71 E-value=2e+02 Score=26.57 Aligned_cols=96 Identities=11% Similarity=0.036 Sum_probs=54.9
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+. |-..|+|
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 28 NFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGA---------GSNCTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHHHhcCCC
Confidence 334443 7998874 11122334455555555555555432 47887644 2334445554444 6667999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..+.
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 98 AVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997544333334666778888887664
No 342
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=39.55 E-value=1.9e+02 Score=26.61 Aligned_cols=115 Identities=14% Similarity=0.177 Sum_probs=67.9
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
+..+|+..|.++.+.. |.......+...-..|++.+....+. .| .++.+...++.++-...++ .
T Consensus 82 lA~~a~~~G~~~~iv~-----------p~~~~~~k~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~l~~~~~~~~~-~ 145 (313)
T 2q3b_A 82 LAMVCAARGYRCVLTM-----------PETMSLERRMLLRAYGAELILTPGAD---GM-SGAIAKAEELAKTDQRYFV-P 145 (313)
T ss_dssp HHHHHHHHTCEEEEEE-----------ETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHCTTEEC-C
T ss_pred HHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEeCCCC---CH-HHHHHHHHHHHHhCCCEEe-C
Confidence 5667889999987631 22222234455667799987776431 12 3555555554433111010 0
Q ss_pred HHHHHHHhcCCCCCCchh--H-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 241 AVFKEMIRSTPLPMSPLE--S-LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~--~-ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
.+. .++.. . ....+.++.++++ .+.|++.+-+|.|+.-++++ .|...|+++
T Consensus 146 ---------~~~-~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~v 205 (313)
T 2q3b_A 146 ---------QQF-ENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAV 205 (313)
T ss_dssp ---------CTT-TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ---------CCC-CChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEE
Confidence 000 12221 1 2334678888874 79999999999998766654 699999999
No 343
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=39.55 E-value=1.6e+02 Score=26.84 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=71.4
Q ss_pred CHHHHHhccccCCCCEEEe-----CCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh---h-cCceeecC
Q 016513 72 DKEDILRWGVPNNIDMIAL-----SFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR---E-TDSFMVAR 142 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~-----sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~---~-~Dgi~igr 142 (388)
|..++++...+.|+++|.+ -|-.+.++++.+++.. +++++.| ..+-+-.+|.. . +|+|.++-
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v-----~lPvl~k----dfI~d~~qi~~a~~~GAD~VlL~~ 136 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV-----DLPLLRK----DFVVDPFMLEEARAFGASAALLIV 136 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC-----CSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEH
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc-----CCCEEEC----CcCCCHHHHHHHHHcCCCEEEECc
Confidence 5566656777899999988 3445899999998854 3555543 34444434433 3 79999987
Q ss_pred CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 143 GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 143 gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
.+|. ..-++++..|+..|..+.+.++ +..|. ..+...|+|.+-++
T Consensus 137 ~~l~---------~~l~~l~~~a~~lGl~~lvev~-----------~~~E~---~~a~~~gad~IGvn 181 (254)
T 1vc4_A 137 ALLG---------ELTGAYLEEARRLGLEALVEVH-----------TEREL---EIALEAGAEVLGIN 181 (254)
T ss_dssp HHHG---------GGHHHHHHHHHHHTCEEEEEEC-----------SHHHH---HHHHHHTCSEEEEE
T ss_pred cchH---------HHHHHHHHHHHHCCCeEEEEEC-----------CHHHH---HHHHHcCCCEEEEc
Confidence 6663 1245677788888988776442 22343 47788899887664
No 344
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=38.95 E-value=2e+02 Score=25.16 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=29.3
Q ss_pred CHHHHHhccccCCCCEEEeC-CCC-----ChhhHHHHHHHHccCCCCc
Q 016513 72 DKEDILRWGVPNNIDMIALS-FVR-----KGSDLVNVRKVLGPHAKNI 113 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-fV~-----sa~dv~~v~~~l~~~~~~~ 113 (388)
+..+..+.+.+.|.|+|=+. .-. +..+++++++.+.+.|-.+
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 62 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKP 62 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEE
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCe
Confidence 34443378889999999887 321 3467888888888776543
No 345
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=38.95 E-value=1.3e+02 Score=27.89 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|.......+...-..|++.+....+ |. ..++.+...+++++.+.. |
T Consensus 75 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~~--~ 137 (303)
T 2v03_A 75 ALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEGK--L 137 (303)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSCE--E
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCc--c
Confidence 4566788999998763 12222233455666779998877642 12 234555544444321111 1
Q ss_pred HHHHHHHHhcCCCCCCch--h-HHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----CCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPL--E-SLASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~-~ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----RP~~pIiav 301 (388)
. .+. .++. . -....+.++.++++ .+.|++.+-+|.|+.-++++ .|...|+++
T Consensus 138 ~---------~~~-~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigv 198 (303)
T 2v03_A 138 L---------DQF-NNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGL 198 (303)
T ss_dssp C---------CTT-TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEE
T ss_pred c---------CCc-CChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEE
Confidence 0 000 1221 1 12334677888875 79999999999998766654 589999999
No 346
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=38.94 E-value=1.8e+02 Score=26.52 Aligned_cols=84 Identities=11% Similarity=0.096 Sum_probs=55.6
Q ss_pred HHHHHhccccCCCCEEEeCCCC--ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCC
Q 016513 73 KEDILRWGVPNNIDMIALSFVR--KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIP 150 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~--sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~ 150 (388)
.+.+ +...+.|.|.|.+.--. +.+++.++.+.+++ .+++++-..=++ +.+.+-+|++++- ||-.+-.
T Consensus 26 ~~~l-~~~~~~GtDaI~vGgs~gvt~~~~~~~v~~ik~--~~~Piil~p~~~------~~~~~gaD~il~p--slln~~~ 94 (235)
T 3w01_A 26 DDDL-DAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRR--YPLPLVLEISNI------ESVMPGFDFYFVP--TVLNSTD 94 (235)
T ss_dssp HHHH-HHHHTSSCSEEEECCSSCCCHHHHHHHHHHHTT--SCSCEEEECCCS------TTCCTTCSEEEEE--EETTBSS
T ss_pred HHHH-HHHHHcCCCEEEECCcCCcCHHHHHHHHHHhcC--cCCCEEEecCCH------HHhhcCCCEEEEc--cccCCCC
Confidence 4555 55678999999999876 78889999999977 466666555444 3345578999994 3333333
Q ss_pred hhhHHHHHHHHHHHHHHcCC
Q 016513 151 VEKIFLAQKMMIYKCNLVGK 170 (388)
Q Consensus 151 ~~~v~~~qk~ii~~c~~~gk 170 (388)
.+-+...|.+ +++++|.
T Consensus 95 ~~~i~g~~~~---a~~~~gl 111 (235)
T 3w01_A 95 VAFHNGTLLE---ALKTYGH 111 (235)
T ss_dssp GGGTTHHHHH---HHHHHGG
T ss_pred cchhhhHHHH---HHHHcCC
Confidence 3333333433 3777886
No 347
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=38.89 E-value=1.7e+02 Score=26.97 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=56.3
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..|++..+- ..+-.|.-+.+. |-..|+|
T Consensus 28 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---------~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 28 EWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RVPVIAGAG---------SNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp HHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---------CSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---------CccHHHHHHHHHHHHHcCCC
Confidence 444443 7898874 11122344555555555555555432 478876542 333345554444 6677999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--...-+.+.++..+.|+..+.
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 98 GVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99997654333345677778888887664
No 348
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=38.87 E-value=1.8e+02 Score=26.95 Aligned_cols=96 Identities=13% Similarity=0.072 Sum_probs=55.6
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+. |-..|+|
T Consensus 28 ~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 28 DWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGA---------GSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp HHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcc---------CCCCHHHHHHHHHHHHhcCCC
Confidence 334443 7998874 11122334555555555555555432 47887654 2334445555444 5667999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..+.
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 98 AVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp EEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997543333334667778888887664
No 349
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=38.79 E-value=96 Score=27.93 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=27.5
Q ss_pred HHHhcCCcEEEEEcCC---------chHHHHHHhhCCCCcEEEE
Q 016513 267 TANKARAKLIVVLTRG---------GTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 267 ~A~~l~A~aIvv~T~s---------G~tA~~vSk~RP~~pIiav 301 (388)
.+.+.+++.||+-++. |.++..+.+.-| |||+.+
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv 160 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIF 160 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEE
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEe
Confidence 7788999988887752 556777887776 999999
No 350
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=38.67 E-value=57 Score=29.76 Aligned_cols=75 Identities=11% Similarity=0.151 Sum_probs=47.1
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCC---C-----hhhHHHHHHHHccCCCCceEEEe--ecCHHhHhhHHHHHhh-cCc
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVR---K-----GSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE-TDS 137 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~---s-----a~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-~Dg 137 (388)
|-.+.+.+ ..+.+.|+|+|.++-+- + +..+..++++......+++++|- | ..+|+.++++. +||
T Consensus 141 S~ht~~Ea-~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI----~~~ni~~~~~aGa~g 215 (243)
T 3o63_A 141 STHDPDQV-AAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI----NAQRLPAVLDAGARR 215 (243)
T ss_dssp EECSHHHH-HHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC----CTTTHHHHHHTTCCC
T ss_pred eCCCHHHH-HHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC----CHHHHHHHHHcCCCE
Confidence 33566777 77888999999996642 2 12355555554332235566653 4 24788888877 899
Q ss_pred eeecCCcccCC
Q 016513 138 FMVARGDLGME 148 (388)
Q Consensus 138 i~igrgDLg~e 148 (388)
+.++++=+..+
T Consensus 216 vav~sai~~a~ 226 (243)
T 3o63_A 216 IVVVRAITSAD 226 (243)
T ss_dssp EEESHHHHTCS
T ss_pred EEEeHHHhCCC
Confidence 99986544433
No 351
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=38.58 E-value=2.3e+02 Score=25.81 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=59.8
Q ss_pred CCCCChHHHHHHHHHHHcCCceeEecccc---CCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchhHHH
Q 016513 185 SPRPTRAEATDVANAVLDGTDCVMLSGES---AAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLA 261 (388)
Q Consensus 185 ~~~ptraEv~dv~~av~~g~d~i~Ls~et---a~G~~P~~~v~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia 261 (388)
.+.|+..-+..+..|+.+|+|.|=+---- -.|+|. ...+-+..+.+.+.... -+..++. ..++ +.-.
T Consensus 90 G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~-~v~~eI~~v~~a~~~~~-lKVIlEt------~~Lt--~eei 159 (239)
T 3ngj_A 90 GATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYD-DVEKDVKAVVDASGKAL-TKVIIEC------CYLT--NEEK 159 (239)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHH-HHHHHHHHHHHHHTTSE-EEEECCG------GGSC--HHHH
T ss_pred CCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHH-HHHHHHHHHHHHhcCCc-eEEEEec------CCCC--HHHH
Confidence 34577777789999999999987542211 125554 35555666665554210 0001100 0112 3346
Q ss_pred HHHHHHHHhcCCcEEEEEcCCchH-----HHHHHhh----CCCCcEEEE
Q 016513 262 SSAVRTANKARAKLIVVLTRGGTT-----AKLVAKY----RPAVPILSV 301 (388)
Q Consensus 262 ~aAv~~A~~l~A~aIvv~T~sG~t-----A~~vSk~----RP~~pIiav 301 (388)
..|+++|.+.+|+ ++=|.||.+ ..-+.-+ .++++|.+-
T Consensus 160 ~~a~~ia~~aGAD--fVKTSTGf~~ggAt~~dv~lmr~~vg~~v~VKas 206 (239)
T 3ngj_A 160 VEVCKRCVAAGAE--YVKTSTGFGTHGATPEDVKLMKDTVGDKALVKAA 206 (239)
T ss_dssp HHHHHHHHHHTCS--EEECCCSSSSCCCCHHHHHHHHHHHGGGSEEEEE
T ss_pred HHHHHHHHHHCcC--EEECCCCCCCCCCCHHHHHHHHHhhCCCceEEEe
Confidence 6789999999999 455665532 2222222 477888876
No 352
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=38.44 E-value=69 Score=28.70 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=70.3
Q ss_pred hccccCCCCEEEe-----CCCCCh----hhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 78 RWGVPNNIDMIAL-----SFVRKG----SDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 78 ~~~l~~g~d~v~~-----sfV~sa----~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+.+.|+|++-+ +||.+. +.++++|+.. +....+--++++++- .++..+++ +||+.+.-.-..
T Consensus 24 ~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~---~~~~~vhlmv~dp~~--~i~~~~~aGadgv~vh~e~~~- 97 (230)
T 1tqj_A 24 KAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT---KKTLDVHLMIVEPEK--YVEDFAKAGADIISVHVEHNA- 97 (230)
T ss_dssp HHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC---CSEEEEEEESSSGGG--THHHHHHHTCSEEEEECSTTT-
T ss_pred HHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc---CCcEEEEEEccCHHH--HHHHHHHcCCCEEEECccccc-
Confidence 6777889998643 344333 4444444432 112334467777733 35555555 799998722001
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec-cccCCC--CCHHHHHH
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS-GESAAG--AYPEIAVK 224 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls-~eta~G--~~P~~~v~ 224 (388)
+ +. -.+.+++++++|+-++++. ||. |..|. ..++.+++|.+.+. -+...| +|+-...+
T Consensus 98 --~-~~----~~~~~~~i~~~g~~~gv~~--------~p~-t~~e~---~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~ 158 (230)
T 1tqj_A 98 --S-PH----LHRTLCQIRELGKKAGAVL--------NPS-TPLDF---LEYVLPVCDLILIMSVNPGFGGQSFIPEVLP 158 (230)
T ss_dssp --C-TT----HHHHHHHHHHTTCEEEEEE--------CTT-CCGGG---GTTTGGGCSEEEEESSCC----CCCCGGGHH
T ss_pred --c-hh----HHHHHHHHHHcCCcEEEEE--------eCC-CcHHH---HHHHHhcCCEEEEEEeccccCCccCcHHHHH
Confidence 1 11 2367788899999999864 221 11221 34566799977553 232222 45555555
Q ss_pred HHHHHHHHH
Q 016513 225 IMRRICIEA 233 (388)
Q Consensus 225 ~~~~i~~~a 233 (388)
.++++.+..
T Consensus 159 ~i~~lr~~~ 167 (230)
T 1tqj_A 159 KIRALRQMC 167 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555433
No 353
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=38.39 E-value=12 Score=30.19 Aligned_cols=62 Identities=13% Similarity=0.041 Sum_probs=44.4
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
=+..+++...++|-++.+.| .+...+++.+.-.|.+++|| .+....+++-+.|...|+|+.+
T Consensus 22 lv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLgP----------QV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILAP----------QVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEECG----------GGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEECh----------HHHHHHHHHHHHhhhcCCcEEE
Confidence 45677777777777777766 23344666667789999973 4555566777778889999876
No 354
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=38.28 E-value=1.2e+02 Score=27.86 Aligned_cols=118 Identities=11% Similarity=0.066 Sum_probs=65.9
Q ss_pred hccccCCCCEEEe-----CCCCChhhHHHHHHHHccCCCCceEEEeecCHH------------hHhhHHHHHhh--cCce
Q 016513 78 RWGVPNNIDMIAL-----SFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQE------------GVVNFDDILRE--TDSF 138 (388)
Q Consensus 78 ~~~l~~g~d~v~~-----sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~------------av~nldeI~~~--~Dgi 138 (388)
+.+++.|+|.|=+ ....+.+++.+....+.+.-.+.++|.-+-|.. -++-+...++. +|.|
T Consensus 39 ~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~i 118 (257)
T 2yr1_A 39 EEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLV 118 (257)
T ss_dssp HHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEE
T ss_pred HHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 4445567776532 333445555544444433222567777665431 12223333332 2322
Q ss_pred eecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCceeEec
Q 016513 139 MVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLS 210 (388)
Q Consensus 139 ~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d~i~Ls 210 (388)
= +|+...+ ..+++++.+++.|..+|.+-+-+ +..|+..|+...+ .+...|+|.+=+.
T Consensus 119 D-------vEl~~~~---~~~~l~~~~~~~~~kvI~S~Hdf-----~~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 119 D-------YELAYGE---RIADVRRMTEECSVWLVVSRHYF-----DGTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp E-------EEGGGTT---HHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred E-------EECCCCh---hHHHHHHHHHhCCCEEEEEecCC-----CCCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 2 2443333 66678888899999999865433 3578888876555 4677899987664
No 355
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=38.02 E-value=34 Score=31.78 Aligned_cols=74 Identities=12% Similarity=0.082 Sum_probs=47.6
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceE-EEeecCHHh--------HhhHHHHHhh-cCceeecCCcccC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQL-MSKVENQEG--------VVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~I-iakIEt~~a--------v~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+.+.|+|++++| ++++..+|+.++. +..+ .+=|- ++| +-++.+.++. +|.+++||+=+..
T Consensus 151 ~~a~~~G~dGvV~s----~~e~~~ir~~~~~---~f~~vtPGIr-~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a 222 (259)
T 3tfx_A 151 KMAKHSGADGVICS----PLEVKKLHENIGD---DFLYVTPGIR-PAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLA 222 (259)
T ss_dssp HHHHHTTCCEEECC----GGGHHHHHHHHCS---SSEEEECCCC-CC-----------CHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHhCCCEEEEC----HHHHHHHHhhcCC---ccEEEcCCcC-CCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 44567899999876 8899999998743 3333 34442 222 2356666665 8999999987777
Q ss_pred CCChhhHHHHHH
Q 016513 148 EIPVEKIFLAQK 159 (388)
Q Consensus 148 e~~~~~v~~~qk 159 (388)
+=|.+.+..+++
T Consensus 223 ~dp~~a~~~i~~ 234 (259)
T 3tfx_A 223 SDPKAAYEAIKK 234 (259)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 666554444443
No 356
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=37.97 E-value=1.7e+02 Score=27.32 Aligned_cols=92 Identities=13% Similarity=0.152 Sum_probs=56.3
Q ss_pred HHHHHHHHcCCceeEeccccC-CCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCc-hhHHHHHHHHHHHhc
Q 016513 194 TDVANAVLDGTDCVMLSGESA-AGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSP-LESLASSAVRTANKA 271 (388)
Q Consensus 194 ~dv~~av~~g~d~i~Ls~eta-~G~~P~~~v~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~-~~~ia~aAv~~A~~l 271 (388)
...-..+.+|||.|=+.+|+. -|.-|+..-+.++++..-+|... .. ...|...+. .-.++.+|+ +.
T Consensus 42 ~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~------~~--~~~piSIDT~~~~va~aAl----~a 109 (282)
T 1aj0_A 42 KHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIA------QR--FEVWISVDTSKPEVIRESA----KV 109 (282)
T ss_dssp HHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHH------HH--CCCEEEEECCCHHHHHHHH----HT
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHH------hh--cCCeEEEeCCCHHHHHHHH----Hc
Confidence 445668899999999999875 67666666666666665555321 00 011222222 223444444 34
Q ss_pred CCcEEEEEcCCc----hHHHHHHhhCCCCcEEEE
Q 016513 272 RAKLIVVLTRGG----TTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 272 ~A~aIvv~T~sG----~tA~~vSk~RP~~pIiav 301 (388)
+++ ++-.-|| .++..+++| .+|++.+
T Consensus 110 Ga~--iINdvsg~~d~~~~~~~a~~--~~~vVlm 139 (282)
T 1aj0_A 110 GAH--IINDIRSLSEPGALEAAAET--GLPVCLM 139 (282)
T ss_dssp TCC--EEEETTTTCSTTHHHHHHHH--TCCEEEE
T ss_pred CCC--EEEECCCCCCHHHHHHHHHh--CCeEEEE
Confidence 877 4445555 688888888 5899888
No 357
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=37.96 E-value=40 Score=31.42 Aligned_cols=82 Identities=11% Similarity=0.117 Sum_probs=51.3
Q ss_pred ccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHH
Q 016513 79 WGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQ 158 (388)
Q Consensus 79 ~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~q 158 (388)
|.++..+=.-.+-+-=+..+.-.+--.++. .++++ + ..+.++++++.+|++.|+.|=| .++.....
T Consensus 12 ~~~~~~Plvh~iTN~V~~n~~AN~~La~Ga----sP~M~--~---~~~e~~e~~~~a~alvIn~G~l-----~~~~~~~~ 77 (273)
T 3dzv_A 12 FPLTTAPLIQCITNEITCESMANALLYIDA----KPIMA--D---DPREFPQMFQQTSALVLNLGHL-----SQEREQSL 77 (273)
T ss_dssp CSCCSCCEEEEECCTTTHHHHHHHHHHTTC----EEECC--C---CGGGHHHHHTTCSEEEEECCSC-----CHHHHHHH
T ss_pred ccCCCCCEEEEecCcchhhhHHHHHHHcCC----chhhc--C---CHHHHHHHHHHCCeEEEecCCC-----ChHHHHHH
Confidence 444444433333444444444444333332 35555 2 3577888999999999998865 23445556
Q ss_pred HHHHHHHHHcCCCEEE
Q 016513 159 KMMIYKCNLVGKPVVT 174 (388)
Q Consensus 159 k~ii~~c~~~gkpvi~ 174 (388)
...++.++++++|+++
T Consensus 78 ~~a~~~a~~~~~PvVl 93 (273)
T 3dzv_A 78 LAASDYARQVNKLTVV 93 (273)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCcEEE
Confidence 6777889999999986
No 358
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=37.90 E-value=2.3e+02 Score=27.19 Aligned_cols=38 Identities=16% Similarity=0.130 Sum_probs=29.6
Q ss_pred HHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHH
Q 016513 194 TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICI 231 (388)
Q Consensus 194 ~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~ 231 (388)
.|+......|+|+++...-.-.-..|.++++.+.+.+.
T Consensus 255 eda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~ 292 (330)
T 2yzr_A 255 ADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATY 292 (330)
T ss_dssp HHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHH
Confidence 46677777899999997666556789999888777664
No 359
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=37.79 E-value=75 Score=30.41 Aligned_cols=66 Identities=8% Similarity=-0.038 Sum_probs=49.6
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-++.+.+.+.+.|..+.+-+.-+.... +.+++++-.|.|+.+-.+ ...+..+-..|+++++|.+.+
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 467777888888888888876665543 567888778888876322 346678999999999998864
No 360
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=37.45 E-value=93 Score=28.99 Aligned_cols=49 Identities=22% Similarity=0.363 Sum_probs=37.7
Q ss_pred HHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHH
Q 016513 159 KMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 227 (388)
Q Consensus 159 k~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~ 227 (388)
+..++.|+++|++|.+=| .+ +-.+...++..|+|+|+- .||..+.+.+.
T Consensus 258 ~~~v~~~~~~Gl~V~~WT--Vn-----------~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~ 306 (313)
T 3l12_A 258 PELVAEAHDLGLIVLTWT--VN-----------EPEDIRRMATTGVDGIVT-------DYPGRTQRILI 306 (313)
T ss_dssp HHHHHHHHHTTCEEEEBC--CC-----------SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEc--CC-----------CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 688999999999999876 11 224567788889999985 68987776654
No 361
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=37.43 E-value=66 Score=30.25 Aligned_cols=67 Identities=16% Similarity=0.210 Sum_probs=47.4
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh-----------hcCceeecCCcccCCCChhhHHHHHHHHHHHHH
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR-----------ETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCN 166 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~-----------~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~ 166 (388)
-++.+++.+.+.|.++.+.+.-+.....+|+++++. -.|.|+-+- +-+..+..+-++|.
T Consensus 90 Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~----------Dn~~~R~~in~~c~ 159 (292)
T 3h8v_A 90 KVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV----------DNFEARMTINTACN 159 (292)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC----------SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC----------cchhhhhHHHHHHH
Confidence 356677778888899998887777666678887763 245444331 22346678899999
Q ss_pred HcCCCEEE
Q 016513 167 LVGKPVVT 174 (388)
Q Consensus 167 ~~gkpvi~ 174 (388)
++|+|.+.
T Consensus 160 ~~~~Pli~ 167 (292)
T 3h8v_A 160 ELGQTWME 167 (292)
T ss_dssp HHTCCEEE
T ss_pred HhCCCEEE
Confidence 99999874
No 362
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.34 E-value=1.7e+02 Score=25.68 Aligned_cols=45 Identities=7% Similarity=-0.021 Sum_probs=33.0
Q ss_pred CHHHHHhccccCCCCEEEeCCC---------------CChhhHHHHHHHHccCCCCceEE
Q 016513 72 DKEDILRWGVPNNIDMIALSFV---------------RKGSDLVNVRKVLGPHAKNIQLM 116 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV---------------~sa~dv~~v~~~l~~~~~~~~Ii 116 (388)
+.....+.+.++|.|+|=+... .+.++++++++.+.+.|-.+..+
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~ 82 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGT 82 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4444447888999999988642 45788999999999887654433
No 363
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=37.31 E-value=1.9e+02 Score=26.66 Aligned_cols=98 Identities=12% Similarity=0.018 Sum_probs=57.6
Q ss_pred HHHHHh-h-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcC
Q 016513 128 FDDILR-E-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDG 203 (388)
Q Consensus 128 ldeI~~-~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g 203 (388)
++-.++ . +||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+ .|-..|
T Consensus 30 v~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~a~~~G 99 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD-QIALIAQV---------GSVNLKEAVELGKYATELG 99 (293)
T ss_dssp HHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEec---------CCCCHHHHHHHHHHHHhcC
Confidence 444555 3 7998874 11122344555555555555555432 46787654 233334554444 466679
Q ss_pred CceeEeccccCCCCCHHHHHHHHHHHHHHHhc
Q 016513 204 TDCVMLSGESAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 204 ~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
+|++|+..=--...-+.+.++..+.|+..+..
T Consensus 100 adavlv~~P~y~~~~~~~l~~~f~~va~a~~l 131 (293)
T 1f6k_A 100 YDCLSAVTPFYYKFSFPEIKHYYDTIIAETGS 131 (293)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 99999975443333456778888888877653
No 364
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=37.25 E-value=1e+02 Score=28.30 Aligned_cols=72 Identities=11% Similarity=0.204 Sum_probs=39.2
Q ss_pred CCCCCEEEEeCC---eEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCHHHHHhccccCCCCEEE
Q 016513 13 VKPGNTILCADG---TITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIA 89 (388)
Q Consensus 13 ~~~gd~i~iddG---~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~ 89 (388)
+++||.|.+-|| ....++.++ +.+.+.+++..--.........+ ....-+|. .++-...+ +.+.+.|++-|.
T Consensus 36 l~~Gd~v~l~dg~g~~~~a~I~~~--~~~~~~~~i~~~~~~~~e~~~~l-~L~~al~K-~~r~e~il-qkatELGv~~I~ 110 (257)
T 1vhy_A 36 MTEGEQLELFDGSNHIYPAKIIES--NKKSVKVEILGRELADKESHLKI-HLGQVISR-GERMEFTI-QKSVELGVNVIT 110 (257)
T ss_dssp CCTTCEEEEECSSSEEEEEEEEEE--CSSCEEEEECCCEECCCCCSSCE-EEEEEC-----CCHHHH-HHHHHTTCCEEE
T ss_pred cCCCCEEEEEcCCCCEEEEEEEEe--eCCeEEEEEEEEecccCCCCceE-EEEEecCc-hHHHHHHH-HHHHhhCcCEEE
Confidence 578999998775 355677765 56677777764322211111111 01122232 23333444 999999999664
No 365
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=37.19 E-value=1.6e+02 Score=26.58 Aligned_cols=132 Identities=11% Similarity=0.104 Sum_probs=68.5
Q ss_pred hCHHHHHhccccCCCCEEEeCCCC------ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCc
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVR------KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGD 144 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~------sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgD 144 (388)
.+..+.++.+.+.|.|+|=+.+-. +..+++++++.+.+.|-.+..+. . .++
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~---~--------------------~~~ 92 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVE---Y--------------------ITQ 92 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEE---C--------------------BCC
T ss_pred CCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeeh---h--------------------hhc
Confidence 344444488889999999886531 33566777777776654332221 1 122
Q ss_pred ccC--CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHH
Q 016513 145 LGM--EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIA 222 (388)
Q Consensus 145 Lg~--e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~ 222 (388)
+.. +-..+. ....++.++.|.+.|.+.++..-. .+.| +....+..+.+.+-+-++.|.-|+--+.+ +.+
T Consensus 93 ~~~~~~~~~~~-~~~~~~~i~~A~~lGa~~v~~g~~------~~~~-~~~~~~~l~~l~~~a~Gv~l~lE~~~~~~-~~~ 163 (296)
T 2g0w_A 93 WGTAEDRTAEQ-QKKEQTTFHMARLFGVKHINCGLL------EKIP-EEQIIVALGELCDRAEELIIGLEFMPYSG-VAD 163 (296)
T ss_dssp CSSTTTCCHHH-HHHHHHHHHHHHHHTCCEEEECCC------SCCC-HHHHHHHHHHHHHHHTTSEEEEECCTTSS-SCS
T ss_pred cccCChHHHHH-HHHHHHHHHHHHHcCCCEEEEcCC------CCCC-HHHHHHHHHHHHHHhcCCEEEEEecCCCC-CCC
Confidence 211 011122 234467888888889887753211 1112 33333322222221144667777654433 455
Q ss_pred HHHHHHHHHHHh
Q 016513 223 VKIMRRICIEAE 234 (388)
Q Consensus 223 v~~~~~i~~~aE 234 (388)
.+.+.++++++.
T Consensus 164 ~~~~~~l~~~v~ 175 (296)
T 2g0w_A 164 LQAAWRVAEACG 175 (296)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 556666677664
No 366
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=37.18 E-value=1.5e+02 Score=27.52 Aligned_cols=96 Identities=13% Similarity=0.031 Sum_probs=55.1
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+. |-..|+|
T Consensus 29 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 29 DYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGT---------GANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp HHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHTTTSSCS
T ss_pred HHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHHHHHhcCCC
Confidence 434443 7998874 11122344555555555555555432 47887654 2334455555554 5567999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..++
T Consensus 99 avlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 99 GCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997543333334566777777776544
No 367
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=37.01 E-value=1.9e+02 Score=27.21 Aligned_cols=91 Identities=18% Similarity=0.207 Sum_probs=59.0
Q ss_pred HHHHHHHHcCCceeEeccccC-CCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCc-hhHHHHHHHHHHHhc
Q 016513 194 TDVANAVLDGTDCVMLSGESA-AGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSP-LESLASSAVRTANKA 271 (388)
Q Consensus 194 ~dv~~av~~g~d~i~Ls~eta-~G~~P~~~v~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~-~~~ia~aAv~~A~~l 271 (388)
...-..+.+|||.|=+.+|+. -|.-|+..-+.++++..-.+.... ...|...+. .-.++.+|++.
T Consensus 50 ~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~---------~~vpiSIDT~~~~Va~aAl~a---- 116 (294)
T 2y5s_A 50 RRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRP---------LNVPLSIDTYKPAVMRAALAA---- 116 (294)
T ss_dssp HHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGG---------GCSCEEEECCCHHHHHHHHHH----
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhh---------CCCeEEEECCCHHHHHHHHHc----
Confidence 445568899999999999875 476777778888888776664311 022222222 23455555544
Q ss_pred CCcEEEEEcCCch----HHHHHHhhCCCCcEEEE
Q 016513 272 RAKLIVVLTRGGT----TAKLVAKYRPAVPILSV 301 (388)
Q Consensus 272 ~A~aIvv~T~sG~----tA~~vSk~RP~~pIiav 301 (388)
+++ ++-.-||. .+..+++| .+|++.+
T Consensus 117 Ga~--iINdVsg~~d~~m~~~~a~~--~~~vVlm 146 (294)
T 2y5s_A 117 GAD--LINDIWGFRQPGAIDAVRDG--NSGLCAM 146 (294)
T ss_dssp TCS--EEEETTTTCSTTHHHHHSSS--SCEEEEE
T ss_pred CCC--EEEECCCCCchHHHHHHHHh--CCCEEEE
Confidence 777 44555554 77777777 5899998
No 368
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=36.88 E-value=96 Score=29.90 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCCEEEhhhHHHHhhc---C-CCC---------ChHHHH-HHHHHHHcCCceeEeccccCC
Q 016513 157 AQKMMIYKCNLVGKPVVTATQMLESMIK---S-PRP---------TRAEAT-DVANAVLDGTDCVMLSGESAA 215 (388)
Q Consensus 157 ~qk~ii~~c~~~gkpvi~atq~lesM~~---~-~~p---------traEv~-dv~~av~~g~d~i~Ls~eta~ 215 (388)
.-..+.++|+++|.|.++.|+.-.++.. . |.| ++.... -+..+...|++++.++-++..
T Consensus 89 ~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~ 161 (370)
T 1gox_A 89 GEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (370)
T ss_dssp HHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred HHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 3456888999999999987654332222 1 211 222222 233466789999999988754
No 369
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=36.82 E-value=1.7e+02 Score=26.50 Aligned_cols=115 Identities=18% Similarity=0.176 Sum_probs=74.6
Q ss_pred HHHcCCCEEEhhhHHHHhhcCCCC-----ChHHH----HHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhc
Q 016513 165 CNLVGKPVVTATQMLESMIKSPRP-----TRAEA----TDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 165 c~~~gkpvi~atq~lesM~~~~~p-----traEv----~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
|+....|+.+ |+. |+. +..|+ .|+..+...|+|++++..=|..|.--.++.+.+-..+...+
T Consensus 50 ~~~~~ipV~v-------MIR-PR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~- 120 (224)
T 2bdq_A 50 LHEKGISVAV-------MIR-PRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLP- 120 (224)
T ss_dssp HHHTTCEEEE-------ECC-SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCC-
T ss_pred hhhcCCceEE-------EEC-CCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCe-
Confidence 7788999987 554 432 45566 69999999999999999999999988777666555443222
Q ss_pred ccchHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcCCcEEEEEcCCchH-----------HHHHHhhCCCCcEEEE
Q 016513 236 SLDYRAVFKEMIRSTPLPMSPLESLASSAVRTANKARAKLIVVLTRGGTT-----------AKLVAKYRPAVPILSV 301 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~A~aIvv~T~sG~t-----------A~~vSk~RP~~pIiav 301 (388)
..|++-....+. .++ ..|.+...+++.+-|+ |..|.. .+++.+..++.-|++.
T Consensus 121 -----vTFHRAFD~~~~-~d~-----~~ale~L~~lGv~rIL--TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~G 184 (224)
T 2bdq_A 121 -----LVFHMAFDVIPK-SDQ-----KKSIDQLVALGFTRIL--LHGSSNGEPIIENIKHIKALVEYANNRIEIMVG 184 (224)
T ss_dssp -----EEECGGGGGSCT-TTH-----HHHHHHHHHTTCCEEE--ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEEC
T ss_pred -----EEEECchhccCC-cCH-----HHHHHHHHHcCCCEEE--CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeC
Confidence 223333333210 122 2346666688999877 543322 2466667777788876
No 370
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=36.78 E-value=4.8e+02 Score=28.98 Aligned_cols=127 Identities=15% Similarity=0.096 Sum_probs=81.6
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCC-------------------------------CCceEEEeec
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHA-------------------------------KNIQLMSKVE 120 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~-------------------------------~~~~IiakIE 120 (388)
..+++++.|.+.|.+.|++.=-.+...+.++.+.....| ....++..-+
T Consensus 133 ~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAk 212 (1041)
T 3f2b_A 133 SVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQ 212 (1041)
T ss_dssp CHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeC
Confidence 355565899999999999988777777666655432110 0124566667
Q ss_pred CHHhHhhHHHHHhh--------------------cCceeecCCcccCCCC-------------------------h----
Q 016513 121 NQEGVVNFDDILRE--------------------TDSFMVARGDLGMEIP-------------------------V---- 151 (388)
Q Consensus 121 t~~av~nldeI~~~--------------------~Dgi~igrgDLg~e~~-------------------------~---- 151 (388)
+.+|..||-.+++. .+|++++.|-+.-++. .
T Consensus 213 N~~Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~ 292 (1041)
T 3f2b_A 213 NETGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYK 292 (1041)
T ss_dssp SHHHHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGC
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccH
Confidence 99999999888763 2577777553322211 0
Q ss_pred -----------hhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcC
Q 016513 152 -----------EKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDG 203 (388)
Q Consensus 152 -----------~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g 203 (388)
+....+.+++++.+++.|+|++ ||+= ++-..|.+++.-|+-.+...|
T Consensus 293 ~l~~~~~~~~~~~~~~~~~~l~~la~~~~~p~V-AT~d----vhy~~~ed~~~~dvL~~~~~~ 350 (1041)
T 3f2b_A 293 PLIEMDYVKDEEMIKNIIRSIVALGEKLDIPVV-ATGN----VHYLNPEDKIYRKILIHSQGG 350 (1041)
T ss_dssp CC----CCSCHHHHHHHHHHHHHHHHHTTCCEE-ECCC----BSBSSGGGHHHHHHHHHTTGG
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHcCCCEE-EeCC----ceecCHhhHHHHHHHHhhccc
Confidence 1233456789999999999987 4521 233467777777776654433
No 371
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=36.63 E-value=41 Score=31.78 Aligned_cols=61 Identities=7% Similarity=0.075 Sum_probs=43.8
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEe-ec-CHHhHhhHHHHHhh-cCceeecCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSK-VE-NQEGVVNFDDILRE-TDSFMVARG 143 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iiak-IE-t~~av~nldeI~~~-~Dgi~igrg 143 (388)
+...++|+|.|+++-+.+.++++++.+.+. +++++. +| .....-+.+++.+. .+.+++++.
T Consensus 174 ~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~ 237 (295)
T 1xg4_A 174 QAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANITEFGATPLFTTDELRSAHVAMALYPLS 237 (295)
T ss_dssp HHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSH
T ss_pred HHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEecccCCCCCCCHHHHHHcCCCEEEEChH
Confidence 344578999999999998999999998883 456553 34 12334567777776 788888744
No 372
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=36.61 E-value=1.8e+02 Score=27.19 Aligned_cols=96 Identities=9% Similarity=0.027 Sum_probs=54.7
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+. |-..|+|
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv---------g~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 40 RYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-KIPVIVGA---------GTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEcC---------CCccHHHHHHHHHHHHhcCCC
Confidence 334443 7898874 11122344555555555555555442 47887654 2334455554444 5667999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..+.
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 110 GVLVVTPYYNKPTQEGLYQHYKYISERTD 138 (306)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99997543333334666777777776554
No 373
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=36.45 E-value=58 Score=31.72 Aligned_cols=71 Identities=20% Similarity=0.168 Sum_probs=42.1
Q ss_pred CHHHHHhccccCCCCEEEeC-------------CC--CChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh
Q 016513 72 DKEDILRWGVPNNIDMIALS-------------FV--RKGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE 134 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-------------fV--~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~ 134 (388)
+.++. +.+.+.|+|+|.++ .. ...+-+.++++.+.. .++.||+ -|-|.+-+. ..+..=
T Consensus 204 ~~~~a-~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~--~~ipVia~GGI~~~~d~~--~ala~G 278 (404)
T 1eep_A 204 TKEAA-LDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNN--TNICIIADGGIRFSGDVV--KAIAAG 278 (404)
T ss_dssp SHHHH-HHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTT--SSCEEEEESCCCSHHHHH--HHHHHT
T ss_pred cHHHH-HHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhh--cCceEEEECCCCCHHHHH--HHHHcC
Confidence 45666 77888999999883 12 122334444444432 3578887 676654442 222223
Q ss_pred cCceeecCCcccC
Q 016513 135 TDSFMVARGDLGM 147 (388)
Q Consensus 135 ~Dgi~igrgDLg~ 147 (388)
+|++++||+=|..
T Consensus 279 Ad~V~iG~~~l~~ 291 (404)
T 1eep_A 279 ADSVMIGNLFAGT 291 (404)
T ss_dssp CSEEEECHHHHTB
T ss_pred CCHHhhCHHHhcC
Confidence 8999999875543
No 374
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=36.34 E-value=2.6e+02 Score=25.78 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=57.2
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d 205 (388)
+..++. +||+++. ---=+..+..++-..+.+..++.++ -..|++..+ ...+-.|.-+.+ .|-..|+|
T Consensus 30 ~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 30 NFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGT---------GTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp HHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeC---------CcccHHHHHHHHHHHHHcCCC
Confidence 344443 7998875 1111233444555555555555553 346887644 233444554444 46667999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHhc
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
++|+..=--..--+.+.++..+.|+..++-
T Consensus 100 avlv~~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 100 AIMLITPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 999975443333456788888999888754
No 375
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=36.30 E-value=1.4e+02 Score=31.91 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=70.7
Q ss_pred ChhCHHHHHhccccCCCCEEEe-------------------CCCCCh--hhHHHHHHHHccCCCCceEEEeecCHHhHhh
Q 016513 69 TEKDKEDILRWGVPNNIDMIAL-------------------SFVRKG--SDLVNVRKVLGPHAKNIQLMSKVENQEGVVN 127 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~-------------------sfV~sa--~dv~~v~~~l~~~~~~~~IiakIEt~~av~n 127 (388)
++.-+.-| .||.++|.++|++ +|++-- -|+++|.++-.++ .+.|+.-.|+..++.|
T Consensus 370 te~~K~YI-DFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n 446 (738)
T 2d73_A 370 TANVKRYI-DFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRN 446 (738)
T ss_dssp HHHHHHHH-HHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHH
T ss_pred HHHHHHHH-HHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhh
Confidence 44447777 9999999999999 221111 2499999999875 5889999999875444
Q ss_pred ----HHHHHhh-----cCceeecC-CcccCCCCh----hhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 128 ----FDDILRE-----TDSFMVAR-GDLGMEIPV----EKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 128 ----ldeI~~~-----~Dgi~igr-gDLg~e~~~----~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
+|+.++. ..||-++= ||. ++-+- ..+.....++++.|.+++.-|...
T Consensus 447 ~e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfH 507 (738)
T 2d73_A 447 YERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAH 507 (738)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEcc
Confidence 4555553 46776641 221 11111 457777789999999999988863
No 376
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=36.29 E-value=44 Score=32.93 Aligned_cols=58 Identities=17% Similarity=0.246 Sum_probs=42.4
Q ss_pred eEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 114 QLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 114 ~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.+.+-||-..-.-++++.++-+|-|+-|-|=+=-+.-..++|. .+.+.|+++|+|||.
T Consensus 267 ~l~~Gi~~v~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~---gVa~~A~~~~vPvia 324 (383)
T 3cwc_A 267 QLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPI---GVANIAKRYNKPVIG 324 (383)
T ss_dssp EEECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHH---HHHHHHHHTTCCEEE
T ss_pred EEccHHHHHHHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHH---HHHHHHHHhCCCEEE
Confidence 4666677777777999999999999999876655555557664 455579999999975
No 377
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=36.24 E-value=2.5e+02 Score=26.52 Aligned_cols=134 Identities=15% Similarity=0.146 Sum_probs=71.7
Q ss_pred HHHhccccCCCCEEEeCCCCCh---------------hhHHHHHHHHccCCCCceEEEeecC-----HHhHhhHHHHHhh
Q 016513 75 DILRWGVPNNIDMIALSFVRKG---------------SDLVNVRKVLGPHAKNIQLMSKVEN-----QEGVVNFDDILRE 134 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~sa---------------~dv~~v~~~l~~~~~~~~IiakIEt-----~~av~nldeI~~~ 134 (388)
++ +.+++.|+|.|.+.+--|. +.+.++.++..+.|.+ +..-+|. ..-.+.+-++++.
T Consensus 101 ~i-~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (337)
T 3ble_A 101 TV-DWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK--INVYLEDWSNGFRNSPDYVKSLVEH 177 (337)
T ss_dssp HH-HHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE--EEEEEETHHHHHHHCHHHHHHHHHH
T ss_pred hH-HHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCCcCCHHHHHHHHHH
Confidence 78 8899999999988764443 3344444445566654 4444555 2223333333332
Q ss_pred -----cCceeecCCc-ccCCCChhhHHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCcee
Q 016513 135 -----TDSFMVARGD-LGMEIPVEKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV 207 (388)
Q Consensus 135 -----~Dgi~igrgD-Lg~e~~~~~v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i 207 (388)
+|.|.++ | .|.-. +.++....+.+.+ .. +.|+.+.+ +|.. -.| +.-...|+..|+|.+
T Consensus 178 ~~~~Ga~~i~l~--DT~G~~~-P~~v~~lv~~l~~---~~p~~~i~~H~-------Hnd~-GlA-~AN~laAv~aGa~~v 242 (337)
T 3ble_A 178 LSKEHIERIFLP--DTLGVLS-PEETFQGVDSLIQ---KYPDIHFEFHG-------HNDY-DLS-VANSLQAIRAGVKGL 242 (337)
T ss_dssp HHTSCCSEEEEE--CTTCCCC-HHHHHHHHHHHHH---HCTTSCEEEEC-------BCTT-SCH-HHHHHHHHHTTCSEE
T ss_pred HHHcCCCEEEEe--cCCCCcC-HHHHHHHHHHHHH---hcCCCeEEEEe-------cCCc-chH-HHHHHHHHHhCCCEE
Confidence 3555553 3 22222 2333333333322 23 67887754 3322 223 122334788999887
Q ss_pred Eec----cccCCCCCHHHHHHHHH
Q 016513 208 MLS----GESAAGAYPEIAVKIMR 227 (388)
Q Consensus 208 ~Ls----~eta~G~~P~~~v~~~~ 227 (388)
=-| || +.|+=|.|.|-.+-
T Consensus 243 d~tv~GlG~-~aGN~~~E~lv~~L 265 (337)
T 3ble_A 243 HASINGLGE-RAGNTPLEALVTTI 265 (337)
T ss_dssp EEBGGGCSS-TTCBCBHHHHHHHH
T ss_pred EEecccccc-cccchhHHHHHHHH
Confidence 543 55 67888888776543
No 378
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=36.22 E-value=1.7e+02 Score=27.42 Aligned_cols=10 Identities=20% Similarity=-0.240 Sum_probs=6.6
Q ss_pred CCEEEEEeec
Q 016513 367 GDAVVALHRI 376 (388)
Q Consensus 367 GD~vVvv~g~ 376 (388)
-|.||+-.|.
T Consensus 178 ~d~vv~pvG~ 187 (325)
T 3dwg_A 178 ITHFVAGLGT 187 (325)
T ss_dssp CCEEEEECSS
T ss_pred CCEEEEecCc
Confidence 5777776665
No 379
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=36.12 E-value=40 Score=31.01 Aligned_cols=45 Identities=20% Similarity=0.273 Sum_probs=34.0
Q ss_pred HhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 125 VVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 125 v~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
++.+.++++.+|.+.|++|=+ .++.......+++.+++.++|+++
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVl 91 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEE
Confidence 566778888899999986644 344445566778888999999986
No 380
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=35.94 E-value=73 Score=28.86 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=47.2
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-++.+++.+.+.|.++.+.+.-+... -+|++++++-.|.|+-+-.+ +..+..+-+.|+++|+|.+.+
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCEEEE
Confidence 45667777777787877766544332 26788888888988876322 125678888999999998764
No 381
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=35.84 E-value=2.1e+02 Score=25.78 Aligned_cols=121 Identities=10% Similarity=0.053 Sum_probs=70.9
Q ss_pred HHHhccccCCCCEEEeCCCC--ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChh
Q 016513 75 DILRWGVPNNIDMIALSFVR--KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVE 152 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~--sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~ 152 (388)
.+ +...+.|.|.|++..-. +.+++.++.+.+++ -+++++-..=++++ +..-+|++++- +|-.+-..+
T Consensus 23 ~~-~~~~~~GtD~i~vGGs~gvt~~~~~~~v~~ik~--~~~Pvvlfp~~~~~------v~~gaD~~l~p--slln~~~~~ 91 (228)
T 3vzx_A 23 QL-EILCESGTDAVIIGGSDGVTEDNVLRMMSKVRR--FLVPCVLEVSAIEA------IVPGFDLYFIP--SVLNSKNAD 91 (228)
T ss_dssp HH-HHHHTSSCSEEEECCCSCCCHHHHHHHHHHHTT--SSSCEEEECSCGGG------CCSCCSEEEEE--EETTBSSGG
T ss_pred HH-HHHHHcCCCEEEECCcCCCCHHHHHHHHHHhhc--cCCCEEEeCCCHHH------ccccCCEEEEe--eecCCCCcc
Confidence 44 55678999999999876 78889999999976 46677765555543 34568999984 333332222
Q ss_pred hHHHHHHHHHHHHHHcCC-----CEEE----------hhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEecc
Q 016513 153 KIFLAQKMMIYKCNLVGK-----PVVT----------ATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSG 211 (388)
Q Consensus 153 ~v~~~qk~ii~~c~~~gk-----pvi~----------atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~ 211 (388)
-+-..|.+- +++.|. .++. ++.-+- ..++.|+..++...+. +-+.|.+.+.|.+
T Consensus 92 ~i~g~~~~a---~~~~g~~~~~~e~i~~gYivv~p~s~~~~~~--~a~~~~~~e~~~~~a~~a~~~g~~~VYld~ 161 (228)
T 3vzx_A 92 WIVGMHQKA---MKEYGELMSMEEIVAEGYCIANPDCKAAALT--EADADLNMDDIVAYARVSELLQLPIFYLEY 161 (228)
T ss_dssp GTTHHHHHH---HHHHHHHHHHSCEEEEEEEECCSSSHHHHHT--TBCCCCCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred hhhhHHHHH---HHHcCCCCcccceeeeEEEEECCCCcceeee--cccCCCCHHHHHHHHHHHHHcCCCEEEecC
Confidence 333344333 577773 3322 111111 1244454444433333 2256788998877
No 382
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=35.75 E-value=1.8e+02 Score=28.05 Aligned_cols=108 Identities=11% Similarity=0.139 Sum_probs=70.6
Q ss_pred hccccCCCCEEEeCCCC-----------ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCccc
Q 016513 78 RWGVPNNIDMIALSFVR-----------KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLG 146 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~-----------sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg 146 (388)
+.+.+.|+|.+-.-+-. ..+..+.+++++.+.| +.+++-+-.++.++-+.+. +|.+-||.+++-
T Consensus 127 ~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~G--l~~~te~~d~~~~~~l~~~---vd~lkIgAr~~~ 201 (350)
T 1vr6_A 127 HFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYG--MYVVTEALGEDDLPKVAEY---ADIIQIGARNAQ 201 (350)
T ss_dssp HHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHHH---CSEEEECGGGTT
T ss_pred HHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcC--CcEEEEeCCHHHHHHHHHh---CCEEEECccccc
Confidence 55566788876432111 1477888888876654 7788888777777666554 799999866552
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHH-cCCceeEe
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVML 209 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~-~g~d~i~L 209 (388)
. -.+++++.+.|||+++.|.| ..|..|+...++++. .|.+-++|
T Consensus 202 ------n-----~~LL~~va~~~kPVilk~G~--------~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 202 ------N-----FRLLSKAGSYNKPVLLKRGF--------MNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp ------C-----HHHHHHHHTTCSCEEEECCT--------TCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ------C-----HHHHHHHHccCCcEEEcCCC--------CCCHHHHHHHHHHHHHCCCCeEEE
Confidence 1 12344455789999986543 247788888888665 46645555
No 383
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=35.55 E-value=33 Score=26.99 Aligned_cols=39 Identities=15% Similarity=0.279 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhhCCCCcEEEE
Q 016513 260 LASSAVRTANKARAKLIVVLTRG--------GTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l~A~aIvv~T~s--------G~tA~~vSk~RP~~pIiav 301 (388)
.+...++.|+ +++.||+-++. |.++..+.+.-| |||+.+
T Consensus 91 ~~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv 137 (138)
T 3idf_A 91 PVEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAP-IPVLIV 137 (138)
T ss_dssp HHHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCS-SCEEEE
T ss_pred hHHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCC-CCEEEe
Confidence 4455566666 99999988753 778888888775 999987
No 384
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=35.54 E-value=1.2e+02 Score=27.75 Aligned_cols=145 Identities=10% Similarity=0.106 Sum_probs=77.6
Q ss_pred CccccCCccccCCCCChhCHHHHHhccccCCCCEEEeCCCC-ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHH
Q 016513 54 KNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDIL 132 (388)
Q Consensus 54 k~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~~sfV~-sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~ 132 (388)
+.+++|-..-+ .++.. . .+ ..+...|+|+|++-... +.++++++.+...+.| ..+++-+-|. +.++..+
T Consensus 98 ~~v~lPvLrKD--fi~~~-~-qi-~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG--l~~lvEv~~~---eE~~~A~ 167 (251)
T 1i4n_A 98 NLTCRPILAKD--FYIDT-V-QV-KLASSVGADAILIIARILTAEQIKEIYEAAEELG--MDSLVEVHSR---EDLEKVF 167 (251)
T ss_dssp TTCCSCEEEEC--CCCST-H-HH-HHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT--CEEEEEECSH---HHHHHHH
T ss_pred HhCCCCEEEee--CCCCH-H-HH-HHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC--CeEEEEeCCH---HHHHHHH
Confidence 45667654333 23221 2 34 44788999998876654 6678888888777654 3344433332 3344444
Q ss_pred hh--cCceeecCCcccCC-CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 133 RE--TDSFMVARGDLGME-IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 133 ~~--~Dgi~igrgDLg~e-~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
+. +|.|-+-.-||... ..++....+.+.+ ..+.+++. .+..-|.. |+..+... +|+++.
T Consensus 168 ~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~i-----p~~~~vIa---------EsGI~t~e---dv~~~~~~-a~avLV 229 (251)
T 1i4n_A 168 SVIRPKIIGINTRDLDTFEIKKNVLWELLPLV-----PDDTVVVA---------ESGIKDPR---ELKDLRGK-VNAVLV 229 (251)
T ss_dssp TTCCCSEEEEECBCTTTCCBCTTHHHHHGGGS-----CTTSEEEE---------ESCCCCGG---GHHHHTTT-CSEEEE
T ss_pred hcCCCCEEEEeCcccccCCCCHHHHHHHHHhC-----CCCCEEEE---------eCCCCCHH---HHHHHHHh-CCEEEE
Confidence 44 56666665555321 2222222222111 12445553 33444554 56777777 999988
Q ss_pred ccccCCCCCHHHHHHHH
Q 016513 210 SGESAAGAYPEIAVKIM 226 (388)
Q Consensus 210 s~eta~G~~P~~~v~~~ 226 (388)
..---....|.++++.|
T Consensus 230 G~aimr~~d~~~~~~~l 246 (251)
T 1i4n_A 230 GTSIMKAENPRRFLEEM 246 (251)
T ss_dssp CHHHHHCSSHHHHHHHH
T ss_pred cHHHcCCcCHHHHHHHH
Confidence 53333346676666654
No 385
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=35.48 E-value=28 Score=33.17 Aligned_cols=61 Identities=11% Similarity=0.116 Sum_probs=43.9
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHh--HhhHHHHHhh-cCceeecC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG--VVNFDDILRE-TDSFMVAR 142 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a--v~nldeI~~~-~Dgi~igr 142 (388)
.+.+ +.+++.|+|+|++-. -+++++++..+.+. .+ ++||-.-| .+|+.++++. +|+|-+|.
T Consensus 219 lde~-~eAl~aGaD~I~LDn-~~~~~l~~av~~i~---~~----v~ieaSGGI~~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 219 LDQL-RTALAHGARSVLLDN-FTLDMMRDAVRVTE---GR----AVLEVSGGVNFDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp HHHH-HHHHHTTCEEEEEES-CCHHHHHHHHHHHT---TS----EEEEEESSCSTTTHHHHHHTTCSEEECGG
T ss_pred HHHH-HHHHHcCCCEEEECC-CCHHHHHHHHHHhC---CC----CeEEEEcCCCHHHHHHHHHcCCCEEEECC
Confidence 4456 778889999999987 46788888887773 33 34443333 3688888886 89998874
No 386
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=35.10 E-value=52 Score=31.81 Aligned_cols=18 Identities=33% Similarity=0.303 Sum_probs=10.2
Q ss_pred HHHHhccccCCCCEEEeCC
Q 016513 74 EDILRWGVPNNIDMIALSF 92 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sf 92 (388)
+++ +.+.+.|+|+|.++.
T Consensus 237 e~a-~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 237 EDA-RLAVQHGAAGIIVSN 254 (370)
T ss_dssp HHH-HHHHHTTCSEEEECC
T ss_pred HHH-HHHHHcCCCEEEECC
Confidence 444 555566666666643
No 387
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=35.02 E-value=1.9e+02 Score=26.86 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=55.1
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+ .|-..|+|
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 40 NYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK-RVPVIAGT---------GSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CceEEeCC---------CCCCHHHHHHHHHHHHhcCCC
Confidence 333443 7998874 11122334455555555555555432 47887654 233334554444 46677999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..+.
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 110 AVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997554333345667778888876554
No 388
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=34.85 E-value=83 Score=28.76 Aligned_cols=71 Identities=11% Similarity=0.222 Sum_probs=40.5
Q ss_pred CCCCCEEEEeCCe---EEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhC-HHHHHhccccCCCCEE
Q 016513 13 VKPGNTILCADGT---ITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKD-KEDILRWGVPNNIDMI 88 (388)
Q Consensus 13 ~~~gd~i~iddG~---i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D-~~di~~~~l~~g~d~v 88 (388)
+++||.|.+-||. ...++.++ +.+.+.+++...-.......+.+ .....+ +..| .+.+++.+.+.|++-|
T Consensus 34 ~~~Gd~v~l~dg~g~~~~a~I~~i--~~~~~~~~i~~~~~~~~e~~~~v-~L~~al---~K~~r~e~ilqkatELGv~~I 107 (251)
T 4e8b_A 34 MGPGQALQLFDGSNQVFDAEITSA--SKKSVEVKVLEGQIDDRESPLHI-HLGQVM---SRGEKMEFTIQKSIELGVSLI 107 (251)
T ss_dssp CCSCCEEEEECSSSEEEEEEEEEE--CSSCEEEEEEEEEECCCCCSSEE-EEEEEC---CSSSHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEEeCCCcEEEEEEEEe--ecceEEEEEeeeecCCCCCCceE-EEEEEe---echhHHHHHHHHHHhhCCCEE
Confidence 6789999987753 56677765 66677777754222221111111 011222 2333 3334488999999977
Q ss_pred E
Q 016513 89 A 89 (388)
Q Consensus 89 ~ 89 (388)
.
T Consensus 108 ~ 108 (251)
T 4e8b_A 108 T 108 (251)
T ss_dssp E
T ss_pred E
Confidence 5
No 389
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=34.55 E-value=1.3e+02 Score=29.23 Aligned_cols=92 Identities=20% Similarity=0.302 Sum_probs=50.8
Q ss_pred ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecC-CcccCCCC---hhhHHHHHHHHHHHHHHcC
Q 016513 95 KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVAR-GDLGMEIP---VEKIFLAQKMMIYKCNLVG 169 (388)
Q Consensus 95 sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igr-gDLg~e~~---~~~v~~~qk~ii~~c~~~g 169 (388)
+.+.++.+++.. +++++.|. ....+......+. +|+|.++- |.-..+.+ ++-++.+ ....+
T Consensus 213 ~~~~i~~i~~~~-----~~Pv~vkg--v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v-------~~~~~ 278 (380)
T 1p4c_A 213 NWEALRWLRDLW-----PHKLLVKG--LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQS-------VAKTG 278 (380)
T ss_dssp CHHHHHHHHHHC-----CSEEEEEE--ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHH-------HHHHC
T ss_pred cHHHHHHHHHhc-----CCCEEEEe--cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHH-------HHHcC
Confidence 456777777654 35777772 1223333333444 79999941 11111111 1222222 22346
Q ss_pred CCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccc
Q 016513 170 KPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 170 kpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~e 212 (388)
.|+|....+- -..|+..++..|+|++++..-
T Consensus 279 ~pVia~GGI~------------~~~dv~kal~~GAdaV~iGr~ 309 (380)
T 1p4c_A 279 KPVLIDSGFR------------RGSDIVKALALGAEAVLLGRA 309 (380)
T ss_dssp SCEEECSSCC------------SHHHHHHHHHTTCSCEEESHH
T ss_pred CeEEEECCCC------------CHHHHHHHHHhCCcHhhehHH
Confidence 6988654322 236889999999999999753
No 390
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=34.51 E-value=2.3e+02 Score=26.36 Aligned_cols=96 Identities=11% Similarity=0.086 Sum_probs=55.3
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++ -..|++..+ ...+-.|.-+.+ .|-..|+|
T Consensus 44 ~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 44 AYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGV---------GTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp HHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecC---------CCCCHHHHHHHHHHHHhcCCC
Confidence 334443 7998874 1122234455555555555555543 247887644 233444555444 46677999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--...-+.+.++..+.|+..+.
T Consensus 114 avlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 114 GLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 99997543322335666778888887654
No 391
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=34.38 E-value=32 Score=30.84 Aligned_cols=70 Identities=13% Similarity=0.156 Sum_probs=42.5
Q ss_pred CHHHHHhccccCCCCEEEeCC-----CCChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh-cCceeecCC
Q 016513 72 DKEDILRWGVPNNIDMIALSF-----VRKGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE-TDSFMVARG 143 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf-----V~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-~Dgi~igrg 143 (388)
|...+.+...+.|+|++.+.- .........++++.... ++++++ .|.++ +.+++.++. +|++++|+.
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~~ 105 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI--DIPFTVGGGIHDF---ETASELILRGADKVSINTA 105 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC--CSCEEEESSCCSH---HHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC--CCCEEEeCCCCCH---HHHHHHHHcCCCEEEEChH
Confidence 666654667789999987652 22333455555544332 455555 46555 345666655 899999877
Q ss_pred ccc
Q 016513 144 DLG 146 (388)
Q Consensus 144 DLg 146 (388)
.|.
T Consensus 106 ~l~ 108 (253)
T 1thf_D 106 AVE 108 (253)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 392
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.32 E-value=2.6e+02 Score=25.27 Aligned_cols=53 Identities=23% Similarity=0.229 Sum_probs=29.9
Q ss_pred CceEEEee-cCH---HhHhhH-HHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 112 NIQLMSKV-ENQ---EGVVNF-DDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 112 ~~~IiakI-Et~---~av~nl-deI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
+++++.+. .++ -|++++ ++..++ +||+++. |+ +.++ ....++.|+++|...+.
T Consensus 94 ~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~--d~----~~e~----~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 94 TIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA--DV----PVEE----SAPFRQAALRHNIAPIF 152 (268)
T ss_dssp SSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET--TC----CGGG----CHHHHHHHHHTTCEEEC
T ss_pred CCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc--CC----CHHH----HHHHHHHHHHcCCcEEE
Confidence 45666654 333 123333 333333 6999984 44 3333 34566889999987654
No 393
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=34.24 E-value=62 Score=26.92 Aligned_cols=54 Identities=6% Similarity=0.067 Sum_probs=39.0
Q ss_pred HhHhhHHHHHhh--cCce--eecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 123 EGVVNFDDILRE--TDSF--MVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 123 ~av~nldeI~~~--~Dgi--~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
+.+..+++.+.. .|.+ ++|-.|+....+.+.+....+.+++.++++|.++++.|
T Consensus 49 ~~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 49 QGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 344555555432 5754 45566988778888888899999999999988877644
No 394
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=34.12 E-value=96 Score=23.53 Aligned_cols=63 Identities=11% Similarity=0.185 Sum_probs=37.7
Q ss_pred HHHHHHHhcCCcEEEEEcC----Cch-HHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccccccccccccEEEEeCC
Q 016513 263 SAVRTANKARAKLIVVLTR----GGT-TAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEG 337 (388)
Q Consensus 263 aAv~~A~~l~A~aIvv~T~----sG~-tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~aR~l~l~~GV~P~l~~~ 337 (388)
.|.+...+...+.|++-.. +|. ..+.+.+..|.+||+.+ |. ........-.+..|+.-++.++
T Consensus 42 ~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~-------t~-----~~~~~~~~~~~~~g~~~~l~KP 109 (130)
T 3eod_A 42 DALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVI-------SA-----TENMADIAKALRLGVEDVLLKP 109 (130)
T ss_dssp HHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEE-------EC-----CCCHHHHHHHHHHCCSEEEESC
T ss_pred HHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE-------Ec-----CCCHHHHHHHHHcCCCEEEeCC
Confidence 3444555667787766432 443 45566667799999999 30 2222222334567888888875
No 395
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=34.08 E-value=1.5e+02 Score=34.40 Aligned_cols=117 Identities=15% Similarity=0.051 Sum_probs=70.7
Q ss_pred ccccCCCCEEEeCC---CCChhhHHHHHHHHccCCCCceEEEeecCHHhHhh-HHHHHhh-cCceeecCCccc-------
Q 016513 79 WGVPNNIDMIALSF---VRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVN-FDDILRE-TDSFMVARGDLG------- 146 (388)
Q Consensus 79 ~~l~~g~d~v~~sf---V~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~n-ldeI~~~-~Dgi~igrgDLg------- 146 (388)
+.+..|++.+.-+- ..+.+++.++.+.+++.+...+|+.|+=.-.++.. .....++ +|+|.|.=.+=|
T Consensus 992 R~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~ 1071 (1520)
T 1ofd_A 992 RRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLS 1071 (1520)
T ss_dssp HTSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHH
T ss_pred cCCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcch
Confidence 46677888664332 35667777777777776667788888643222222 2223333 799999422211
Q ss_pred ----CCCChhhHHHHHHHHHHHHHHc----CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEec
Q 016513 147 ----MEIPVEKIFLAQKMMIYKCNLV----GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 147 ----~e~~~~~v~~~qk~ii~~c~~~----gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls 210 (388)
..+|. ..+...+.++..+. ..|++.+..+- --.||+.|+..|||++.+.
T Consensus 1072 ~~~~~GlPt---~~aL~ev~~al~~~glr~~IpVIAdGGIr------------tG~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1072 SIKHAGSPW---ELGVTEVHRVLMENQLRDRVLLRADGGLK------------TGWDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp HHHHBCCCH---HHHHHHHHHHHHHTTCGGGCEEEEESSCC------------SHHHHHHHHHTTCSEEECS
T ss_pred hhcCCchhH---HHHHHHHHHHHHhcCCCCCceEEEECCCC------------CHHHHHHHHHcCCCeeEEc
Confidence 11232 23334444555544 47888876644 3579999999999999885
No 396
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=33.92 E-value=56 Score=30.03 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=25.8
Q ss_pred eeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 138 FMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 138 i~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
-++|=|..|.+...+.=..+-++.++.|++.|+|+++-+
T Consensus 92 ~vvaIGEiGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~ 130 (261)
T 3guw_A 92 EWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHT 130 (261)
T ss_dssp CCSCEEEEECSSCCHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CeEEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEEEc
Confidence 345557777776543222334567788999999999854
No 397
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=33.90 E-value=72 Score=28.31 Aligned_cols=42 Identities=7% Similarity=-0.007 Sum_probs=29.6
Q ss_pred hCHHHHHhccccCCCCEEEeCCCC-----ChhhHHHHHHHHccCCCC
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVR-----KGSDLVNVRKVLGPHAKN 112 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~-----sa~dv~~v~~~l~~~~~~ 112 (388)
.+..+..+.+.++|.|+|=+.... +..+++++++.+.+.|-.
T Consensus 16 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~ 62 (281)
T 3u0h_A 16 TSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLV 62 (281)
T ss_dssp CCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCE
T ss_pred CCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCc
Confidence 344444388889999999877643 356788888888777644
No 398
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=33.87 E-value=2.3e+02 Score=24.79 Aligned_cols=80 Identities=14% Similarity=0.100 Sum_probs=43.6
Q ss_pred EEEeCCCCChh---hHHHHHHHHccCCCCceEEEeecCHH-hHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHH
Q 016513 87 MIALSFVRKGS---DLVNVRKVLGPHAKNIQLMSKVENQE-GVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMM 161 (388)
Q Consensus 87 ~v~~sfV~sa~---dv~~v~~~l~~~~~~~~IiakIEt~~-av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~i 161 (388)
++++|...++- -++.+.+.+.+.|-++.+..-=.+.+ -.+.++.+++. .|||++.+.|- ......
T Consensus 9 g~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----------~~~~~~ 78 (291)
T 3l49_A 9 GITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNL----------DVLNPW 78 (291)
T ss_dssp EEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCH----------HHHHHH
T ss_pred EEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh----------hhhHHH
Confidence 34555554432 24445555666665544442112221 23445555543 79999975542 123345
Q ss_pred HHHHHHcCCCEEEhh
Q 016513 162 IYKCNLVGKPVVTAT 176 (388)
Q Consensus 162 i~~c~~~gkpvi~at 176 (388)
++.+.++|+|+++..
T Consensus 79 ~~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 79 LQKINDAGIPLFTVD 93 (291)
T ss_dssp HHHHHHTTCCEEEES
T ss_pred HHHHHHCCCcEEEec
Confidence 677888999988743
No 399
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.74 E-value=2.1e+02 Score=26.79 Aligned_cols=88 Identities=13% Similarity=0.061 Sum_probs=53.2
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.+ -..|++..| ...+-+|.-+.+ .|-..|+|++|+..=
T Consensus 43 v~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 43 CEGVTVLGILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp CSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CCEEEeCccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 7998874 111223344555555555555555 357887644 234445555444 466779999999643
Q ss_pred cCCCCCHHHHHHHHHHHHHHHh
Q 016513 213 SAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~aE 234 (388)
- .-.-+.+.++..+.|+..+.
T Consensus 112 ~-~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 112 P-SLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp T-TCCSHHHHHHHHHHHHHHHC
T ss_pred C-CCCCHHHHHHHHHHHHHhCC
Confidence 3 11234677888889998886
No 400
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=33.23 E-value=1.2e+02 Score=28.59 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=24.7
Q ss_pred CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccc
Q 016513 169 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGE 212 (388)
Q Consensus 169 gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~e 212 (388)
+.|+|....+- ...|+..++..|+|++++..-
T Consensus 256 ~ipvia~GGI~------------~~~d~~kal~~GAd~V~igr~ 287 (332)
T 1vcf_A 256 HLPLVASGGVY------------TGTDGAKALALGADLLAVARP 287 (332)
T ss_dssp SSCEEEESSCC------------SHHHHHHHHHHTCSEEEECGG
T ss_pred CCeEEEECCCC------------CHHHHHHHHHhCCChHhhhHH
Confidence 68988765433 346889999999999999753
No 401
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=33.22 E-value=3.1e+02 Score=25.70 Aligned_cols=91 Identities=22% Similarity=0.323 Sum_probs=52.1
Q ss_pred HHHHHHHcCCceeEeccccC-CCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCc-hhHHHHHHHHHHHhcC
Q 016513 195 DVANAVLDGTDCVMLSGESA-AGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSP-LESLASSAVRTANKAR 272 (388)
Q Consensus 195 dv~~av~~g~d~i~Ls~eta-~G~~P~~~v~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~-~~~ia~aAv~~A~~l~ 272 (388)
..-..+.+|+|.|=+.+|++ -|.-|+..-+.+++++.-.|... .. ...|...+. .-.++.+|++. +
T Consensus 68 ~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~------~~--~~vpiSIDT~~~~V~~aAl~a----G 135 (297)
T 1tx2_A 68 HAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVS------KE--VKLPISIDTYKAEVAKQAIEA----G 135 (297)
T ss_dssp HHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHH------HH--SCSCEEEECSCHHHHHHHHHH----T
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHH------hc--CCceEEEeCCCHHHHHHHHHc----C
Confidence 44557899999999999875 45555556666666664433211 00 012222222 23355555554 8
Q ss_pred CcEEEEEcCCch-----HHHHHHhhCCCCcEEEE
Q 016513 273 AKLIVVLTRGGT-----TAKLVAKYRPAVPILSV 301 (388)
Q Consensus 273 A~aIvv~T~sG~-----tA~~vSk~RP~~pIiav 301 (388)
++.| -+-+|. .+..+++|. +|++.+
T Consensus 136 a~iI--Ndvsg~~~d~~m~~~aa~~g--~~vVlm 165 (297)
T 1tx2_A 136 AHII--NDIWGAKAEPKIAEVAAHYD--VPIILM 165 (297)
T ss_dssp CCEE--EETTTTSSCTHHHHHHHHHT--CCEEEE
T ss_pred CCEE--EECCCCCCCHHHHHHHHHhC--CcEEEE
Confidence 7733 444543 467788885 899998
No 402
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=33.16 E-value=86 Score=29.92 Aligned_cols=102 Identities=8% Similarity=-0.024 Sum_probs=67.1
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHH----HHHccCCC-CceEEEee---cCHHhHhhHHHHHhh--cCce--
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVR----KVLGPHAK-NIQLMSKV---ENQEGVVNFDDILRE--TDSF-- 138 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~----~~l~~~~~-~~~IiakI---Et~~av~nldeI~~~--~Dgi-- 138 (388)
.|...+ +.=+++|+|+++--++=+.+....++ +.+..+|- +++|++=| -|...++.+. +.-+ .+-+
T Consensus 166 ~d~~~L-k~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~~-~~G~~IP~~l~~ 243 (315)
T 3ijd_A 166 DEHLRI-IDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMK-WLGISIPRWLEN 243 (315)
T ss_dssp CHHHHH-HHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHHH-HHTCCCCHHHHH
T ss_pred HHHHHH-HHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHHh-cCCCCCCHHHHH
Confidence 467777 78889999999999999999999988 45666776 78888876 4555444433 2211 0100
Q ss_pred -eecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 139 -MVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 139 -~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
|-+-.| ..+.|.+-....-+++...|+..|.|.++.
T Consensus 244 ~l~~~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~G~n 280 (315)
T 3ijd_A 244 DLMNCED-ILNKSVSLSKSIFNELMEFCLEKGIPIGCN 280 (315)
T ss_dssp HHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhCCC-HHHHHHHHHHHHHHHHHHhcCcCCcCCCcc
Confidence 001123 233444444555578888899999999863
No 403
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=32.86 E-value=2.3e+02 Score=24.10 Aligned_cols=125 Identities=10% Similarity=0.026 Sum_probs=67.6
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCC
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIP 150 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~ 150 (388)
+.+.+ +.+.+.|+|+|+.|. -+.+-+ +.+.+. .+.+++-+-|++-+. .-++. +|.+-+-++++. +
T Consensus 72 ~~~~~-~~a~~~Gad~iv~~~-~~~~~~----~~~~~~--g~~vi~g~~t~~e~~---~a~~~Gad~vk~~~~~~~---g 137 (205)
T 1wa3_A 72 SVEQC-RKAVESGAEFIVSPH-LDEEIS----QFCKEK--GVFYMPGVMTPTELV---KAMKLGHTILKLFPGEVV---G 137 (205)
T ss_dssp SHHHH-HHHHHHTCSEEECSS-CCHHHH----HHHHHH--TCEEECEECSHHHHH---HHHHTTCCEEEETTHHHH---H
T ss_pred CHHHH-HHHHHcCCCEEEcCC-CCHHHH----HHHHHc--CCcEECCcCCHHHHH---HHHHcCCCEEEEcCcccc---C
Confidence 45666 778889999994444 343323 333333 467777665654221 11222 577665432221 1
Q ss_pred hhhHHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCC---HHHHHHHH
Q 016513 151 VEKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAY---PEIAVKIM 226 (388)
Q Consensus 151 ~~~v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~---P~~~v~~~ 226 (388)
. +.+-+.+... +.|++....+ .| .++..+...|+|++...+-... .. |.+.++.+
T Consensus 138 ~-------~~~~~l~~~~~~~pvia~GGI--------~~-----~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~ 196 (205)
T 1wa3_A 138 P-------QFVKAMKGPFPNVKFVPTGGV--------NL-----DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAF 196 (205)
T ss_dssp H-------HHHHHHHTTCTTCEEEEBSSC--------CT-----TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHH
T ss_pred H-------HHHHHHHHhCCCCcEEEcCCC--------CH-----HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHH
Confidence 1 1111122223 6787764432 12 2567888899999998754433 45 66666665
Q ss_pred HHHHH
Q 016513 227 RRICI 231 (388)
Q Consensus 227 ~~i~~ 231 (388)
.+.++
T Consensus 197 ~~~~~ 201 (205)
T 1wa3_A 197 VEKIR 201 (205)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 404
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=32.73 E-value=41 Score=27.10 Aligned_cols=29 Identities=24% Similarity=0.470 Sum_probs=21.6
Q ss_pred ecCCCccccCCCCCEEEEeCCeEEEEEEEE
Q 016513 4 MSYKKLPVDVKPGNTILCADGTITLTVLSC 33 (388)
Q Consensus 4 ~~~~~~~~~~~~gd~i~iddG~i~l~v~~~ 33 (388)
+|.++ ++.+++||.|.+.+..+..+|+.+
T Consensus 26 lnd~k-~~~ikvGD~I~f~~~~l~~~V~~v 54 (109)
T 2z0t_A 26 LYDEK-RRQIKPGDIIIFEGGKLKVKVKGI 54 (109)
T ss_dssp ECCTT-GGGCCTTCEEEEGGGTEEEEEEEE
T ss_pred ecchh-hhcCCCCCEEEECCCEEEEEEEEE
Confidence 34444 678999999999655888888755
No 405
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=32.71 E-value=47 Score=30.87 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=35.2
Q ss_pred hHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 124 GVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 124 av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
..+-.+|+.+.+|++.|..|-| .++........++.++++|+|+++
T Consensus 46 ~~~E~~e~~~~a~al~iNiGtl-----~~~~~~~m~~A~~~A~~~~~PvVL 91 (265)
T 3hpd_A 46 AEEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHCCeEEEECCCC-----ChHHHHHHHHHHHHHHHcCCCEEE
Confidence 4467888999999999987765 334445556677899999999986
No 406
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=32.48 E-value=2.9e+02 Score=25.89 Aligned_cols=146 Identities=12% Similarity=0.027 Sum_probs=76.5
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHH-HHHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDV-ANAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv-~~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+. ..|-..|+|++|+..=
T Consensus 57 v~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 57 INGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK-RVPVVAGA---------GSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp CSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEeCccccCccccCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 6898864 11112334445555555555555532 47887654 23334455444 4567789999999754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhccc-chHHHHHHHHhcCCCCCCchhHHHHHHHHHHHhc-CCcEEEEEcC--CchHHHH
Q 016513 213 SAAGAYPEIAVKIMRRICIEAESSL-DYRAVFKEMIRSTPLPMSPLESLASSAVRTANKA-RAKLIVVLTR--GGTTAKL 288 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~aE~~~-~~~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l-~A~aIvv~T~--sG~tA~~ 288 (388)
--..--+.+.++..+.|+..+.--+ .|. +.... . ...++ +. ..++|++. |...| =.|. -.+..+.
T Consensus 127 ~y~~~~~~~l~~~f~~va~a~~lPiilYn--~P~~t-g--~~l~~-~~----~~~La~~~pnIvgi-Kdssgd~~~~~~l 195 (315)
T 3si9_A 127 YYNRPNQRGLYTHFSSIAKAISIPIIIYN--IPSRS-V--IDMAV-ET----MRDLCRDFKNIIGV-KDATGKIERASEQ 195 (315)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCSSCEEEEE--CHHHH-S--CCCCH-HH----HHHHHHHCTTEEEE-EECSCCTHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCCEEEEe--Cchhh-C--CCCCH-HH----HHHHHhhCCCEEEE-EeCCCCHHHHHHH
Confidence 4333335677888888887765321 121 11111 1 12222 22 34455533 32221 1221 2356666
Q ss_pred HHhhCCCCcEEEE
Q 016513 289 VAKYRPAVPILSV 301 (388)
Q Consensus 289 vSk~RP~~pIiav 301 (388)
+...+|+..|+..
T Consensus 196 ~~~~~~~f~v~~G 208 (315)
T 3si9_A 196 REKCGKDFVQLSG 208 (315)
T ss_dssp HHHHCSSSEEEES
T ss_pred HHHcCCCeEEEec
Confidence 7777788877776
No 407
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=32.46 E-value=95 Score=28.97 Aligned_cols=89 Identities=9% Similarity=0.023 Sum_probs=56.4
Q ss_pred HHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHH
Q 016513 102 VRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLE 180 (388)
Q Consensus 102 v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~le 180 (388)
+|+.+......+.+++.+.+++-++.+ ... +|.+++..-|-. ...+ .++. .+.++...|+++++=+.
T Consensus 30 ~k~~l~~G~~~~gl~~~~~~p~~~e~a---~~~GaD~v~lDlEh~~--~~~~---~~~~-~l~a~~~~~~~~~VRv~--- 97 (287)
T 2v5j_A 30 FKAALKAGRPQIGLWLGLSSSYSAELL---AGAGFDWLLIDGEHAP--NNVQ---TVLT-QLQAIAPYPSQPVVRPS--- 97 (287)
T ss_dssp HHHHHHTTCCEEEEEECSCCHHHHHHH---HTSCCSEEEEESSSSS--CCHH---HHHH-HHHHHTTSSSEEEEECS---
T ss_pred HHHHHHCCCcEEEEEEECCCHHHHHHH---HhCCCCEEEEeCCCcc--chHH---HHHH-HHHHHHhcCCCEEEEEC---
Confidence 666665422257789999888766432 222 799999877752 1122 2222 33455667888887442
Q ss_pred HhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 181 SMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 181 sM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
.++. .|+..++..|+|+||+.-
T Consensus 98 ------~~d~---~di~~~ld~ga~~ImlP~ 119 (287)
T 2v5j_A 98 ------WNDP---VQIKQLLDVGTQTLLVPM 119 (287)
T ss_dssp ------SSCH---HHHHHHHHTTCCEEEESC
T ss_pred ------CCCH---HHHHHHHhCCCCEEEeCC
Confidence 2222 388888889999999963
No 408
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=32.38 E-value=2.5e+02 Score=24.45 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=29.5
Q ss_pred CHHHHHhccccCCCCEEEeCCC------CChhhHHHHHHHHccCCCCc
Q 016513 72 DKEDILRWGVPNNIDMIALSFV------RKGSDLVNVRKVLGPHAKNI 113 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV------~sa~dv~~v~~~l~~~~~~~ 113 (388)
+....++.+.+.|.|+|=+..- .+.++++++++.+.+.|-.+
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 3344337888999999988632 14577888999998776544
No 409
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=32.24 E-value=1.7e+02 Score=26.88 Aligned_cols=115 Identities=17% Similarity=0.122 Sum_probs=68.4
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|.......+...-..|++.+...++. .| .++++...++.++- ..++
T Consensus 79 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~~-~~~~~~a~~~~~~~-~~~~- 141 (303)
T 1o58_A 79 AIAMIGAKRGHRVILT-----------MPETMSVERRKVLKMLGAELVLTPGEL---GM-KGAVEKALEISRET-GAHM- 141 (303)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---HH-HHHHHHHHHHHHHH-CCBC-
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHhc-CeEe-
Confidence 4566788999998763 122222344556667799987764321 12 35555555554332 1111
Q ss_pred HHHHHHHHhcCCCCCCchhH---HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhh----CCC-CcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPLES---LASSAVRTANKAR--AKLIVVLTRGGTTAKLVAKY----RPA-VPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~---ia~aAv~~A~~l~--A~aIvv~T~sG~tA~~vSk~----RP~-~pIiav 301 (388)
. .+. .++... ....+.++.++++ .+.|++.+-+|.++.-++++ .|. ..|+++
T Consensus 142 ~---------~~~-~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigv 203 (303)
T 1o58_A 142 L---------NQF-ENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAV 203 (303)
T ss_dssp C---------CTT-TCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred C---------CCC-CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEE
Confidence 0 000 122111 2334678888875 79999999999998766654 588 899999
No 410
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=32.18 E-value=3.2e+02 Score=25.53 Aligned_cols=130 Identities=15% Similarity=0.134 Sum_probs=72.6
Q ss_pred CChhCHHHHHhccccCCCCEEEeCC-------------CCChhhHHHHHHHHccCCCCceEEEeec------C-HHhHhh
Q 016513 68 LTEKDKEDILRWGVPNNIDMIALSF-------------VRKGSDLVNVRKVLGPHAKNIQLMSKVE------N-QEGVVN 127 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g~d~v~~sf-------------V~sa~dv~~v~~~l~~~~~~~~IiakIE------t-~~av~n 127 (388)
+|.+|..-- +.+-+.|+|.|.+.. --+.+|+..-.+.+.+..+...|++=.+ + .++++|
T Consensus 39 ~tayDa~sA-~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 117 (281)
T 1oy0_A 39 LTAYDYSTA-RIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAA 117 (281)
T ss_dssp EECCSHHHH-HHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHH
T ss_pred EeCcCHHHH-HHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHH
Confidence 466777666 667778999997742 1134444433333433334567777665 2 457788
Q ss_pred HHHHHh-h-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEE----EhhhHH---HHhhcCCCCChH-HH-HHH
Q 016513 128 FDDILR-E-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVV----TATQML---ESMIKSPRPTRA-EA-TDV 196 (388)
Q Consensus 128 ldeI~~-~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi----~atq~l---esM~~~~~ptra-Ev-~dv 196 (388)
.-.+++ . +++|-+-=|+ -+-..|+++.++|+||+ +--|-. .......+..++ |+ .|.
T Consensus 118 a~rl~~eaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA 185 (281)
T 1oy0_A 118 ATRFLKDGGAHAVKLEGGE------------RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADA 185 (281)
T ss_dssp HHHHHHTTCCSEEEEEBSG------------GGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECCcH------------HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHH
Confidence 888887 3 6888774341 22344566678899986 211211 111111111122 22 455
Q ss_pred HHHHHcCCceeEec
Q 016513 197 ANAVLDGTDCVMLS 210 (388)
Q Consensus 197 ~~av~~g~d~i~Ls 210 (388)
......|+|+++|-
T Consensus 186 ~a~~eAGA~~ivlE 199 (281)
T 1oy0_A 186 IAVAEAGAFAVVME 199 (281)
T ss_dssp HHHHHHTCSEEEEE
T ss_pred HHHHHcCCcEEEEe
Confidence 66778899999994
No 411
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=32.13 E-value=1e+02 Score=28.40 Aligned_cols=71 Identities=18% Similarity=0.282 Sum_probs=39.4
Q ss_pred CCCCCEEEEeCC---eEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhCH-HHHHhccccCCCCEE
Q 016513 13 VKPGNTILCADG---TITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKDK-EDILRWGVPNNIDMI 88 (388)
Q Consensus 13 ~~~gd~i~iddG---~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D~-~di~~~~l~~g~d~v 88 (388)
+++||.|.+-|| ....++.++ +.+.+.+++..--.........+ ....-+| ..|+ +.+++.+.+.|++-|
T Consensus 37 l~~Gd~i~l~dg~G~~~~a~I~~~--~~~~~~~~i~~~~~~~~e~~~~v-~L~~al~---K~~r~e~ilqkatELGV~~I 110 (268)
T 1vhk_A 37 MNEGDQIICCSQDGFEAKCELQSV--SKDKVSCLVIEWTNENRELPIKV-YIASGLP---KGDKLEWIIQKGTELGAHAF 110 (268)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEE--CSSEEEEEEEEECCCCCCCSSEE-EEEEECC---STTHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEe--cCCEEEEEEEEEeccCCCCCccE-EEEEeee---cCccHHHHHHHHHHhCcCEE
Confidence 588999998764 566677765 66677776653211111111111 1112233 2233 334489999999976
Q ss_pred E
Q 016513 89 A 89 (388)
Q Consensus 89 ~ 89 (388)
.
T Consensus 111 ~ 111 (268)
T 1vhk_A 111 I 111 (268)
T ss_dssp E
T ss_pred E
Confidence 4
No 412
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=32.12 E-value=95 Score=28.05 Aligned_cols=45 Identities=13% Similarity=0.084 Sum_probs=30.4
Q ss_pred HHHHHhhcCceeecCCc------ccCCC----C--hhhHHHHHHHHHHHHHHcCCCE
Q 016513 128 FDDILRETDSFMVARGD------LGMEI----P--VEKIFLAQKMMIYKCNLVGKPV 172 (388)
Q Consensus 128 ldeI~~~~Dgi~igrgD------Lg~e~----~--~~~v~~~qk~ii~~c~~~gkpv 172 (388)
+++.++..||+++.-|. ++-+. + .+.-......+++.+.+.|||+
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~Pi 111 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPI 111 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCE
Confidence 67777789999998772 11111 1 1233445678889999999998
No 413
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=32.03 E-value=1.3e+02 Score=26.98 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=58.7
Q ss_pred CCChHHHHHHHHHHHcCCceeEeccccC---CCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchhHHHHH
Q 016513 187 RPTRAEATDVANAVLDGTDCVMLSGESA---AGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLASS 263 (388)
Q Consensus 187 ~ptraEv~dv~~av~~g~d~i~Ls~eta---~G~~P~~~v~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia~a 263 (388)
.|+..-+..+..|+.+|+|.|-+----. .|+| -+..+-+..+.+.+.... -+.++. ....+ +.-...
T Consensus 68 ~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~-~~v~~ei~~v~~a~~~~~-lkvIle------t~~l~--~e~i~~ 137 (220)
T 1ub3_A 68 QEKEVKALEAALACARGADEVDMVLHLGRAKAGDL-DYLEAEVRAVREAVPQAV-LKVILE------TGYFS--PEEIAR 137 (220)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCH-HHHHHHHHHHHHHSTTSE-EEEECC------GGGSC--HHHHHH
T ss_pred CchHHHHHHHHHHHHcCCCEEEecccchhhhCCCH-HHHHHHHHHHHHHHcCCC-ceEEEe------cCCCC--HHHHHH
Confidence 4555566889999999999985532111 2344 456667777776654311 000000 00112 334667
Q ss_pred HHHHHHhcCCcEEEEEcCCch-----HHHHHHhh----CCCCcEEEE
Q 016513 264 AVRTANKARAKLIVVLTRGGT-----TAKLVAKY----RPAVPILSV 301 (388)
Q Consensus 264 Av~~A~~l~A~aIvv~T~sG~-----tA~~vSk~----RP~~pIiav 301 (388)
|+++|.+.+|+.| =|.||. |..-+..+ .+++||.+-
T Consensus 138 a~~ia~eaGADfV--KTsTGf~~~gat~~dv~~m~~~vg~~v~Vkaa 182 (220)
T 1ub3_A 138 LAEAAIRGGADFL--KTSTGFGPRGASLEDVALLVRVAQGRAQVKAA 182 (220)
T ss_dssp HHHHHHHHTCSEE--ECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHhCCCEE--EeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEE
Confidence 8999999999954 444443 33222222 467888887
No 414
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=31.95 E-value=65 Score=30.83 Aligned_cols=72 Identities=17% Similarity=0.061 Sum_probs=43.3
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCC-------------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFV-------------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE- 134 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV-------------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~- 134 (388)
+..|...+++...+.|+|+|-++.- .+.+-++++++.+ ++.|++ .......++.+++++.
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~-~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGA-VGLITTPEQAETLLQAG 310 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEE-CSSCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEE-ECCCCCHHHHHHHHHCC
Confidence 4444444435666789999999831 0122345555544 355554 2333334566777765
Q ss_pred -cCceeecCCccc
Q 016513 135 -TDSFMVARGDLG 146 (388)
Q Consensus 135 -~Dgi~igrgDLg 146 (388)
+|.|++||+=|+
T Consensus 311 ~aD~V~iGR~~la 323 (349)
T 3hgj_A 311 SADLVLLGRVLLR 323 (349)
T ss_dssp SCSEEEESTHHHH
T ss_pred CceEEEecHHHHh
Confidence 799999998654
No 415
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=31.82 E-value=2.1e+02 Score=26.84 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=71.6
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCC-Ch--HH----HHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHH
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRP-TR--AE----ATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~p-tr--aE----v~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
.+..+|+..|.++.+. |-.+. | .. .| -..+...-..|++.+....+.. ...+.++.+.+.++.++
T Consensus 83 alA~~a~~~G~~~~iv------~p~~~-~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~-~~~~~~~~~~a~~l~~~ 154 (341)
T 1f2d_A 83 MVAALAAKLGKKCVLI------QEDWV-PIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFD-IGMRKSFANALQELEDA 154 (341)
T ss_dssp HHHHHHHHHTCEEEEE------EECCS-CCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCC-SSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCceEEE------eccCC-CccccccccccccccHHHHHhCCCEEEEeCCccc-hhHHHHHHHHHHHHHhc
Confidence 4556799999998763 11111 1 00 11 2345666778999877654321 11223455555555443
Q ss_pred HhcccchHHH-HHHHHhcCCCCCCchhHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 233 AESSLDYRAV-FKEMIRSTPLPMSPLESLASSAVRTANKA-----RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 233 aE~~~~~~~~-~~~~~~~~~~~~~~~~~ia~aAv~~A~~l-----~A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
-...+.+..- |. . |.. .+.....+.++.+++ ..+.|++..-+|.|+.-+++ ++|...|+++
T Consensus 155 ~~~~~~i~~~~~~-----n--p~~-~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigV 225 (341)
T 1f2d_A 155 GHKPYPIPAGCSE-----H--KYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAI 225 (341)
T ss_dssp TCCEEEECGGGTT-----S--TTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEE
T ss_pred CCcEEEeCCCcCC-----C--Ccc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEE
Confidence 2111221111 11 1 111 123455667777765 47999999999999776665 4689999999
No 416
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=31.70 E-value=58 Score=30.74 Aligned_cols=64 Identities=9% Similarity=0.129 Sum_probs=38.2
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEE----eecCHHhHhhHHHHHhh-cCceeecCCcccCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMS----KVENQEGVVNFDDILRE-TDSFMVARGDLGME 148 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~Iia----kIEt~~av~nldeI~~~-~Dgi~igrgDLg~e 148 (388)
..+.+.|+|+|-.|+. .+..+++++.+ .+++++ +....+.++++.+.++. ++|+.+||.=+-.+
T Consensus 196 riA~elGAD~VKt~~t--~e~~~~vv~~~-----~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 196 RIAAEMGAQIIKTYYV--EKGFERIVAGC-----PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSD 264 (295)
T ss_dssp HHHHHTTCSEEEEECC--TTTHHHHHHTC-----SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSS
T ss_pred HHHHHhCCCEEEeCCC--HHHHHHHHHhC-----CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCc
Confidence 5677888888888875 34555554432 233332 11334566666666655 67888887665554
No 417
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=31.67 E-value=3.2e+02 Score=25.40 Aligned_cols=90 Identities=8% Similarity=0.022 Sum_probs=53.2
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.++ -..|++..+ ...+-.|.-+.+ .|-..|+|++|+..=
T Consensus 50 v~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 50 CDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGA---------GTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp CSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEEC---------CCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeC---------CCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 6898874 1122234445555555555555543 246887644 233445555444 466679999999754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHh
Q 016513 213 SAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~aE 234 (388)
--..--+.+.++..+.|+..++
T Consensus 120 ~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 120 YYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCHHHHHHHHHHHHHhcC
Confidence 4333335677788888877664
No 418
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=31.52 E-value=1e+02 Score=27.96 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=40.7
Q ss_pred CCCCCEEEEeCC---eEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCCCCChhC-HHHHHhccccCCCCEE
Q 016513 13 VKPGNTILCADG---TITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLPTLTEKD-KEDILRWGVPNNIDMI 88 (388)
Q Consensus 13 ~~~gd~i~iddG---~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~~lt~~D-~~di~~~~l~~g~d~v 88 (388)
+++||.|.+-|| ....++.++ +.+.+.+++...-........ ...+-+ .++..| .+.+++.+.+.|++-|
T Consensus 41 l~~Gd~v~l~dg~G~~~~a~I~~~--~~~~~~~~i~~~~~~~~e~~~---~i~L~~-al~K~~r~e~ilqkatELGV~~I 114 (234)
T 1z85_A 41 LKEGDVIEATDGNGFSYTCILKSL--KKKTAAAKIVKVEEKEKEPTE---KLSVVV-PIGRWERTRFLIEKCVELGVDEI 114 (234)
T ss_dssp CCTTCEEEEECSBSEEEEEEEEEE--CSSCEEEEEEEEEECCCCCSS---CEEEEE-ECCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEEEe--cCCEEEEEEEEEeccCCCCCc---eEEEEE-eccchHHHHHHHHHHHHhCCCEE
Confidence 689999998774 445567755 566777766543222221111 111211 122223 2334588999999976
Q ss_pred EeCCC
Q 016513 89 ALSFV 93 (388)
Q Consensus 89 ~~sfV 93 (388)
. |+.
T Consensus 115 ~-p~~ 118 (234)
T 1z85_A 115 F-FHK 118 (234)
T ss_dssp E-EEC
T ss_pred E-EEE
Confidence 4 443
No 419
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=31.32 E-value=53 Score=33.63 Aligned_cols=68 Identities=7% Similarity=-0.094 Sum_probs=49.2
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhH-hhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGV-VNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av-~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
-++.+++.+.+.|.++.+.+.-+....+ +|.+++++-.|.|+.+-.+ +..+..+-+.|+++|+|.+.+
T Consensus 87 Ka~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~----------~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 87 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP----------ESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp HHHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCC----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 3566778888889888887766665544 4556666667888776322 236778889999999998876
No 420
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=31.23 E-value=75 Score=32.10 Aligned_cols=72 Identities=13% Similarity=0.157 Sum_probs=41.5
Q ss_pred CHHHHHhccccCCCCEEEeC-----CC----------CChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh
Q 016513 72 DKEDILRWGVPNNIDMIALS-----FV----------RKGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE 134 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-----fV----------~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~ 134 (388)
+.+.. +.+.++|+|+|.++ .. .+.+-+.++.+.+.+. ++++|| -|-|++-+.. .+..-
T Consensus 282 t~e~a-~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIa~GGI~~~~di~k--ala~G 356 (496)
T 4fxs_A 282 TAEGA-RALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADGGIRFSGDISK--AIAAG 356 (496)
T ss_dssp SHHHH-HHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHH--HHHTT
T ss_pred cHHHH-HHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccC--CCeEEEeCCCCCHHHHHH--HHHcC
Confidence 34555 66778899999875 32 2233445555555433 477888 4555443321 22223
Q ss_pred cCceeecCCcccCC
Q 016513 135 TDSFMVARGDLGME 148 (388)
Q Consensus 135 ~Dgi~igrgDLg~e 148 (388)
+|++|+|+.=++.+
T Consensus 357 Ad~V~iGs~f~~t~ 370 (496)
T 4fxs_A 357 ASCVMVGSMFAGTE 370 (496)
T ss_dssp CSEEEESTTTTTBT
T ss_pred CCeEEecHHHhcCC
Confidence 79999997755544
No 421
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=31.16 E-value=2.4e+02 Score=26.06 Aligned_cols=100 Identities=12% Similarity=0.063 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCceeEeccccC-------CCCCHHHHHHHHHHHHHHHhcccchHH-----HHHHHHhcCCCCCCchhHH
Q 016513 193 ATDVANAVLDGTDCVMLSGESA-------AGAYPEIAVKIMRRICIEAESSLDYRA-----VFKEMIRSTPLPMSPLESL 260 (388)
Q Consensus 193 v~dv~~av~~g~d~i~Ls~eta-------~G~~P~~~v~~~~~i~~~aE~~~~~~~-----~~~~~~~~~~~~~~~~~~i 260 (388)
..|+..++..|+|.+++..=++ .++=+.|.++.+.++++.+-+.-..-. .|. .......++ ..
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~---~e~~~~~~~--~~ 160 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLG---CPYDGDVDP--RQ 160 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTC---BTTTBCCCH--HH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEee---CCcCCCCCH--HH
Confidence 4688889999999999854332 345567778888877776654211000 000 000001122 24
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCch-----HHHHHHhhCCCCc
Q 016513 261 ASSAVRTANKARAKLIVVLTRGGT-----TAKLVAKYRPAVP 297 (388)
Q Consensus 261 a~aAv~~A~~l~A~aIvv~T~sG~-----tA~~vSk~RP~~p 297 (388)
+...++.+.+.+++.|.+....|. ...++...|-..|
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~ 202 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVP 202 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCC
Confidence 555566677899998888777774 4567777775553
No 422
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=31.12 E-value=1.2e+02 Score=27.72 Aligned_cols=91 Identities=10% Similarity=0.038 Sum_probs=46.4
Q ss_pred CHHHHHhccccCCCCEEEeCC--------CCCh-------------h-----hHHHHHHHHccCCCCceEEE--eecCHH
Q 016513 72 DKEDILRWGVPNNIDMIALSF--------VRKG-------------S-----DLVNVRKVLGPHAKNIQLMS--KVENQE 123 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sf--------V~sa-------------~-----dv~~v~~~l~~~~~~~~Iia--kIEt~~ 123 (388)
+...+++.+.+.|+|+|.++. .++. . .+..++++... -++.||+ -|-|++
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~--~~ipvia~GGI~~~~ 254 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD--VDIPIIGMGGVANAQ 254 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT--CSSCEEECSSCCSHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh--cCCCEEEECCcCCHH
Confidence 334432677889999999953 2221 0 12223332222 2566776 344433
Q ss_pred hHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCC
Q 016513 124 GVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGK 170 (388)
Q Consensus 124 av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gk 170 (388)
++.+.++. +|++++||+=|. +.+-+..+.+.+-......|.
T Consensus 255 ---d~~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 255 ---DVLEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp ---HHHHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTC
T ss_pred ---HHHHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCC
Confidence 33333333 899999998665 333333444444333344443
No 423
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=31.08 E-value=65 Score=26.78 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=25.2
Q ss_pred ccccCCCCCEEEEeCC----eEEEEEEEEeC-CCCeEEEEEccCeee
Q 016513 9 LPVDVKPGNTILCADG----TITLTVLSCDP-KSGTVRCRCENTAML 50 (388)
Q Consensus 9 ~~~~~~~gd~i~iddG----~i~l~v~~~~~-~~~~i~~~v~~~g~l 50 (388)
+.+.+++||.|+..|| ...-+|.+++. ....+.|=....|.|
T Consensus 88 ~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~~Gti 134 (145)
T 1at0_A 88 FADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTREGTI 134 (145)
T ss_dssp EGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEESSSEE
T ss_pred EHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccCcEEE
Confidence 6789999999999987 33345554421 122355544444443
No 424
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=31.04 E-value=2.1e+02 Score=29.21 Aligned_cols=137 Identities=14% Similarity=0.074 Sum_probs=0.0
Q ss_pred HHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCccc-------
Q 016513 75 DILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLG------- 146 (388)
Q Consensus 75 di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg------- 146 (388)
++ +.+++.|+|+|.++ ++--.+..+|+.+ +.+..|-+=+-|.+-+....+.-.. +|.|.+|+--=+
T Consensus 77 ~~-dlA~~~gAdGVHLg--q~dl~~~~ar~~l---g~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~ 150 (540)
T 3nl6_A 77 RI-DVAMAIGADGIHVG--QDDMPIPMIRKLV---GPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPK 150 (540)
T ss_dssp CS-HHHHHTTCSEEEEC--TTSSCHHHHHHHH---CTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC---
T ss_pred cH-HHHHHcCCCEEEEC--hhhcCHHHHHHHh---CCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcC
Q ss_pred -CCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHH--------cCCceeEeccccCCCC
Q 016513 147 -MEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL--------DGTDCVMLSGESAAGA 217 (388)
Q Consensus 147 -~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~--------~g~d~i~Ls~eta~G~ 217 (388)
..+|++.+..+.+.+-+ +....+|++. +=--.|..+ ...+. .|+|++.+.+.--.-.
T Consensus 151 ~~~~G~~~l~~i~~~~~~-~~~~~iPvvA--------IGGI~~~ni-----~~v~~~~~~~g~~~GadgvAVvsaI~~a~ 216 (540)
T 3nl6_A 151 KAPMGTAGAIRVLDALER-NNAHWCRTVG--------IGGLHPDNI-----ERVLYQCVSSNGKRSLDGICVVSDIIASL 216 (540)
T ss_dssp -CCCHHHHHHHHHHHHHH-TTCTTCEEEE--------ESSCCTTTH-----HHHHHHCBCTTSSCBCSCEEESHHHHTCT
T ss_pred CCCCCHHHHHHHHHHHHh-hccCCCCEEE--------EcCCCHHHH-----HHHHHhhcccccccCceEEEEeHHHhcCC
Q ss_pred CHHHHHHHHHHHHH
Q 016513 218 YPEIAVKIMRRICI 231 (388)
Q Consensus 218 ~P~~~v~~~~~i~~ 231 (388)
.|.++++.+.+++.
T Consensus 217 dp~~a~~~l~~~~~ 230 (540)
T 3nl6_A 217 DAAKSTKILRGLID 230 (540)
T ss_dssp THHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
No 425
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=31.01 E-value=1e+02 Score=27.58 Aligned_cols=57 Identities=11% Similarity=0.069 Sum_probs=41.0
Q ss_pred HHHH-HHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCceeEeccccCCCCCHHHHHHHHHHHH
Q 016513 154 IFLA-QKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 230 (388)
Q Consensus 154 v~~~-qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~ 230 (388)
...+ -...++.++++|+++.+-| + + .| .+... +...|+|+|+- .||..+.+.++..|
T Consensus 178 ~~~~~~~~~v~~~~~~G~~v~~wT--v----n--~~-----~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~~ 236 (248)
T 1zcc_A 178 PAQMRRPGIIEASRKAGLEIMVYY--G----G--DD-----MAVHREIATSDVDYINL-------DRPDLFAAVRSGMA 236 (248)
T ss_dssp HHHHHSHHHHHHHHHHTCEEEEEC--C----C--CC-----HHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHCCCEEEEEC--C----C--CH-----HHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHhc
Confidence 3344 5789999999999999877 1 1 12 34566 77889999875 58988777666443
No 426
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=30.90 E-value=52 Score=31.04 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=43.8
Q ss_pred hccccCCCCEEEeCCC----CChhhHHHHHHHHccC-CCC-ceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 78 RWGVPNNIDMIALSFV----RKGSDLVNVRKVLGPH-AKN-IQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV----~sa~dv~~v~~~l~~~-~~~-~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+.+.|+|++-++.. .+.+++.++.+..... +.. +.+..-+-..+-++++.+.++. ++|+.+||.=+..
T Consensus 184 ~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 184 KELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp HHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred HHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 6677889999988884 4556666666653332 222 2223333222345677777765 7999999987755
No 427
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=30.79 E-value=2.2e+02 Score=28.67 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=49.9
Q ss_pred EeCCeEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCcc-----------------ccCCCC-ChhCHHHHHhccc-
Q 016513 21 CADGTITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVV-----------------VDLPTL-TEKDKEDILRWGV- 81 (388)
Q Consensus 21 iddG~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~-----------------~~~~~l-t~~D~~di~~~~l- 81 (388)
++++.+..+|. .+..+. .+=|.-.++..+++|... +-+|.+ +..|...+ ...+
T Consensus 137 ~~~~~i~~~v~----~gG~L~---~~KgvNlPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~-~~~l~ 208 (470)
T 1e0t_A 137 IEGNKVICKVL----NNGDLG---ENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEI-REHLK 208 (470)
T ss_dssp EETTEEEEEEC----SCEEEC---SSCEEECSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHH-HHHHH
T ss_pred EeCCeEEEEEe----cCcEEe---CCceeecCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHH-HHHHH
Confidence 46778877776 222222 233667777778887321 223333 55666666 4444
Q ss_pred cC-CCCEEEeCCCCChhhHHHHHHHH
Q 016513 82 PN-NIDMIALSFVRKGSDLVNVRKVL 106 (388)
Q Consensus 82 ~~-g~d~v~~sfV~sa~dv~~v~~~l 106 (388)
+. |.+.-+++++++++-++.+.+++
T Consensus 209 ~~~~~~i~IiakIEt~eav~nldeI~ 234 (470)
T 1e0t_A 209 AHGGENIHIISKIENQEGLNNFDEIL 234 (470)
T ss_dssp TTTCTTCEEEEEECSHHHHHTHHHHH
T ss_pred HhcCCCceEEEEECCHHHHHhHHHHH
Confidence 34 66778889999999999888875
No 428
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=30.72 E-value=2.6e+02 Score=24.69 Aligned_cols=110 Identities=14% Similarity=0.158 Sum_probs=63.1
Q ss_pred hHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcC-ceeecCCc------ccCC-CCh-hhHHHHHHHHHHHHHHc
Q 016513 98 DLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETD-SFMVARGD------LGME-IPV-EKIFLAQKMMIYKCNLV 168 (388)
Q Consensus 98 dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~D-gi~igrgD------Lg~e-~~~-~~v~~~qk~ii~~c~~~ 168 (388)
-++.+.+.+.+.+..-.++..-=+.+.+..+.++..-.. |.+.+... ++.. +.. ......-...++.|+++
T Consensus 116 ~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (238)
T 3no3_A 116 AARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVL 195 (238)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHT
T ss_pred HHHHHHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHC
Confidence 345566666655544345555556777766666554322 22222110 1111 000 11222235789999999
Q ss_pred CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHH
Q 016513 169 GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 227 (388)
Q Consensus 169 gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~ 227 (388)
|+++.+-| .- +-.+...++..|+|+|+- .||....+.+.
T Consensus 196 G~~v~~WT----------Vn---~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 234 (238)
T 3no3_A 196 GMTSNVWT----------VD---DPKLMEEMIDMGVDFITT-------DLPEETQKILH 234 (238)
T ss_dssp TCEEEEEC----------CC---SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHH
T ss_pred CCEEEEEC----------CC---CHHHHHHHHHcCCCEEEC-------CCHHHHHHHHH
Confidence 99998866 11 234567788889999885 68988777654
No 429
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=30.72 E-value=73 Score=28.73 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=37.8
Q ss_pred HHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHH
Q 016513 158 QKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMR 227 (388)
Q Consensus 158 qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~ 227 (388)
-+..++.|+++|+++.+-|- - +-.+...++..|+|+|+- .||....+.++
T Consensus 199 ~~~~v~~~~~~G~~v~~WTv----------n---~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~ 248 (252)
T 3qvq_A 199 DVQQVSDIKAAGYKVLAFTI----------N---DESLALKLYNQGLDAVFS-------DYPQKIQSAID 248 (252)
T ss_dssp CHHHHHHHHHTTCEEEEECC----------C---CHHHHHHHHHTTCCEEEE-------SSHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEcC----------C---CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHH
Confidence 36789999999999988661 1 234567788899999986 68987766654
No 430
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=30.67 E-value=3.3e+02 Score=25.19 Aligned_cols=148 Identities=17% Similarity=0.162 Sum_probs=73.1
Q ss_pred cCceeecCCc-ccC-CCChh-----hHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCcee
Q 016513 135 TDSFMVARGD-LGM-EIPVE-----KIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCV 207 (388)
Q Consensus 135 ~Dgi~igrgD-Lg~-e~~~~-----~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i 207 (388)
.|.|++ || |++ .+|.+ .+.......-.-++....|.+++= +..|-.. .|.++ +.-+...+.-|++++
T Consensus 38 ~d~ilv--Gdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD--~pfgsy~-~~~~a-~~~a~rl~kaGa~aV 111 (264)
T 1m3u_A 38 LNVMLV--GDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLAD--LPFMAYA-TPEQA-FENAATVMRAGANMV 111 (264)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEE--CCTTSSS-SHHHH-HHHHHHHHHTTCSEE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEE--CCCCCcC-CHHHH-HHHHHHHHHcCCCEE
Confidence 699998 54 443 34543 223333333344555666655432 2222222 33222 233445667899999
Q ss_pred EeccccCCCCCHHHHHHHHHHHHHHHhcccc-------hHHHHHHHHhcCCCCCCchhHHHHHHHH---HHHhcCCcEEE
Q 016513 208 MLSGESAAGAYPEIAVKIMRRICIEAESSLD-------YRAVFKEMIRSTPLPMSPLESLASSAVR---TANKARAKLIV 277 (388)
Q Consensus 208 ~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~-------~~~~~~~~~~~~~~~~~~~~~ia~aAv~---~A~~l~A~aIv 277 (388)
-|=+- . +.+..++.+. +.-+. ..+..+..... .-.-..++-+..+.+ +-++.+|.+|+
T Consensus 112 klEgg----~---e~~~~I~al~---~agipV~gHiGLtPq~v~~~ggf--~v~grt~~~a~~~i~rA~a~~eAGA~~iv 179 (264)
T 1m3u_A 112 KIEGG----E---WLVETVQMLT---ERAVPVCGHLGLTPQSVNIFGGY--KVQGRGDEAGDQLLSDALALEAAGAQLLV 179 (264)
T ss_dssp ECCCS----G---GGHHHHHHHH---HTTCCEEEEEESCGGGHHHHTSS--CCCCCSHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EECCc----H---HHHHHHHHHH---HCCCCeEeeecCCceeecccCCe--EEEeCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 88432 1 3344444443 22210 00001111000 011111222233333 33467999999
Q ss_pred EEcCCchHHHHHHhhCCCCcEEEE
Q 016513 278 VLTRGGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 278 v~T~sG~tA~~vSk~RP~~pIiav 301 (388)
+--..-..++.+++-= ++|++.+
T Consensus 180 lE~vp~~~a~~it~~l-~iP~igI 202 (264)
T 1m3u_A 180 LECVPVELAKRITEAL-AIPVIGI 202 (264)
T ss_dssp EESCCHHHHHHHHHHC-SSCEEEE
T ss_pred EecCCHHHHHHHHHhC-CCCEEEe
Confidence 9877667888888776 4999999
No 431
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=30.66 E-value=1.3e+02 Score=28.34 Aligned_cols=42 Identities=24% Similarity=0.269 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhc----CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 260 LASSAVRTANKA----RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 260 ia~aAv~~A~~l----~A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
....+.++.+++ ..+.|++.+-+|.|+--+++ ..|.+.|+++
T Consensus 183 ~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigV 232 (342)
T 4d9b_A 183 YVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGV 232 (342)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEE
Confidence 344567777775 47899999999988776654 4799999999
No 432
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.45 E-value=95 Score=27.12 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=54.9
Q ss_pred HHHHHhccccCCCCEEEeCCCC-ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCC
Q 016513 73 KEDILRWGVPNNIDMIALSFVR-KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIP 150 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~-sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~ 150 (388)
.+.+ +.+++.|+++|-+..-. +.++..++-+.+... ....++. + ++.+--.++ +||+-++..|+.....
T Consensus 16 ~~~~-~~a~~~Gv~~v~lr~k~~~~~~~~~~i~~l~~~-~~~~liv---n----d~~~~A~~~gadgvhl~~~~~~~~~~ 86 (210)
T 3ceu_A 16 DKII-TALFEEGLDILHLRKPETPAMYSERLLTLIPEK-YHRRIVT---H----EHFYLKEEFNLMGIHLNARNPSEPHD 86 (210)
T ss_dssp HHHH-HHHHHTTCCEEEECCSSCCHHHHHHHHHHSCGG-GGGGEEE---S----SCTTHHHHTTCSEEECCSSSCSCCTT
T ss_pred HHHH-HHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHH-hCCeEEE---e----CCHHHHHHcCCCEEEECccccccccc
Confidence 4666 88899999999887432 234443332222221 2344443 1 333333333 7999998777733211
Q ss_pred hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 151 VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 151 ~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
.++.++..+. |..| +..|. .|+|.+.++.
T Consensus 87 -----------------~~~~ig~s~~-----------t~~e---~~~A~-~GaDyv~~g~ 115 (210)
T 3ceu_A 87 -----------------YAGHVSCSCH-----------SVEE---VKNRK-HFYDYVFMSP 115 (210)
T ss_dssp -----------------CCSEEEEEEC-----------SHHH---HHTTG-GGSSEEEECC
T ss_pred -----------------cCCEEEEecC-----------CHHH---HHHHh-hCCCEEEECC
Confidence 2566665432 3333 34455 7999999864
No 433
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=30.18 E-value=1.1e+02 Score=28.75 Aligned_cols=119 Identities=12% Similarity=0.089 Sum_probs=67.7
Q ss_pred HHHHhccccCCCCEEEeCCCC--ChhhHHHHHHHHccCCCCceEEEee---cCHHhHhhHHHHHhh-cCceeecCCcccC
Q 016513 74 EDILRWGVPNNIDMIALSFVR--KGSDLVNVRKVLGPHAKNIQLMSKV---ENQEGVVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~--sa~dv~~v~~~l~~~~~~~~IiakI---Et~~av~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+|| ..+.++|+|+|.+-+-+ .--|+..+++++...+. ..+.-.= +.++-.+.++.+++. .|.|+-+-+.-++
T Consensus 115 ~dI-~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a 192 (287)
T 3iwp_A 115 ADI-RLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA 192 (287)
T ss_dssp HHH-HHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST
T ss_pred HHH-HHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh
Confidence 477 78889999999999843 33678888888765432 2211100 112245667777774 7888887664444
Q ss_pred CCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHH-cCCceeEeccc
Q 016513 148 EIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGE 212 (388)
Q Consensus 148 e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~-~g~d~i~Ls~e 212 (388)
.-+++.+ ++. ++. ..|+..|++.-=+ .++.. ...+. -|++.+=+|+-
T Consensus 193 ~~Gl~~L---k~L-v~~--a~~rI~ImaGGGV-------~~~Ni-----~~l~~~tG~~~~H~S~~ 240 (287)
T 3iwp_A 193 LEGLPLI---KRL-IEQ--AKGRIVVMPGGGI-------TDRNL-----QRILEGSGATEFHCSAR 240 (287)
T ss_dssp TTTHHHH---HHH-HHH--HTTSSEEEECTTC-------CTTTH-----HHHHHHHCCSEEEECCE
T ss_pred HHhHHHH---HHH-HHH--hCCCCEEEECCCc-------CHHHH-----HHHHHhhCCCEEeECcC
Confidence 4444433 332 222 2344445443222 33332 33333 59999988863
No 434
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=30.12 E-value=1.9e+02 Score=26.78 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=54.0
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHH-HHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVAN-AVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~-av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++ -..|++..+- ..+-.|.-+.+. |-..|+|
T Consensus 31 ~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---------~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 31 RRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI-APSRIVTGVL---------VDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp HHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC-CGGGEEEEEC---------CSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---------CccHHHHHHHHHHHHhcCCC
Confidence 334443 7898874 1112233444444444444443332 1357776442 333345544444 6667999
Q ss_pred eeEeccccCCC-CCHHHHHHHHHHHHHHH
Q 016513 206 CVMLSGESAAG-AYPEIAVKIMRRICIEA 233 (388)
Q Consensus 206 ~i~Ls~eta~G-~~P~~~v~~~~~i~~~a 233 (388)
++|+..=--.. .-+.+.++..+.|+..+
T Consensus 101 avlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 101 NILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp EEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 99997544333 34577888999999887
No 435
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=30.08 E-value=2.8e+02 Score=24.29 Aligned_cols=35 Identities=6% Similarity=-0.078 Sum_probs=25.4
Q ss_pred hccccCCCCEEEeCC---CCChhhHHHHHHHHccCCCCc
Q 016513 78 RWGVPNNIDMIALSF---VRKGSDLVNVRKVLGPHAKNI 113 (388)
Q Consensus 78 ~~~l~~g~d~v~~sf---V~sa~dv~~v~~~l~~~~~~~ 113 (388)
+.+.+.|.|+|=+.. -.+. +++++++.+.+.|-.+
T Consensus 30 ~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i 67 (264)
T 1yx1_A 30 PLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLEC 67 (264)
T ss_dssp HHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEE
T ss_pred HHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEE
Confidence 677888999987742 2233 8899999998876543
No 436
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=30.04 E-value=1.3e+02 Score=26.91 Aligned_cols=128 Identities=13% Similarity=0.179 Sum_probs=73.2
Q ss_pred hccccCCCCEEEeCCCCC-hhhHHHHHHHHccCCCCceEEEeecCHHhH----hhHHHHHhh--cCceeecCCcccCCCC
Q 016513 78 RWGVPNNIDMIALSFVRK-GSDLVNVRKVLGPHAKNIQLMSKVENQEGV----VNFDDILRE--TDSFMVARGDLGMEIP 150 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~s-a~dv~~v~~~l~~~~~~~~IiakIEt~~av----~nldeI~~~--~Dgi~igrgDLg~e~~ 150 (388)
+.+.+. |++.+.=.-- .+-++.+++...+.++.+.+++..-++... .++-..++. .||++.+. ..
T Consensus 74 ~~~~~~--d~vTVh~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~g~~GvV~sa------t~ 145 (222)
T 4dbe_A 74 ERLSFA--NSFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGG------TK 145 (222)
T ss_dssp TTCTTC--SEEEEESTTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHHCCSEEEECT------TC
T ss_pred HHHHhC--CEEEEEcCcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHhCCCEEEECC------CC
Confidence 344444 8887754444 567888888776666667777777666442 233333332 47776541 11
Q ss_pred hhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHH
Q 016513 151 VEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRIC 230 (388)
Q Consensus 151 ~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~ 230 (388)
.+++..+.+ ..|...++ |.=. +| +-.+...++..|+|.++.+.--.-...|.++.+.+.+-+
T Consensus 146 p~e~~~ir~-------~~~~~~~v-tPGI-------~~---~g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i 207 (222)
T 4dbe_A 146 LDHITQYRR-------DFEKMTIV-SPGM-------GS---QGGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKII 207 (222)
T ss_dssp HHHHHHHHH-------HCTTCEEE-ECCB-------ST---TSBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHH-------hCCCCEEE-cCCc-------cc---CccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHH
Confidence 123322211 12332222 2111 22 223456788899999999877777789998887766555
Q ss_pred H
Q 016513 231 I 231 (388)
Q Consensus 231 ~ 231 (388)
.
T Consensus 208 ~ 208 (222)
T 4dbe_A 208 E 208 (222)
T ss_dssp H
T ss_pred H
Confidence 3
No 437
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=29.61 E-value=43 Score=27.62 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=39.6
Q ss_pred HhHhhHHHHHh--hcCcee--ecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 123 EGVVNFDDILR--ETDSFM--VARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 123 ~av~nldeI~~--~~Dgi~--igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
+.+.++++.+. -.|.++ +|-.|+....+.+.+....+++++.++++|.++++.+
T Consensus 53 ~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~ 110 (185)
T 3hp4_A 53 GALRRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALME 110 (185)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhhcCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 44556666654 357544 4555887778888899999999999999998887643
No 438
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=29.52 E-value=1e+02 Score=30.99 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=41.8
Q ss_pred CHHHHHhccccCCCCEEEeC-----CC----------CChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh
Q 016513 72 DKEDILRWGVPNNIDMIALS-----FV----------RKGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE 134 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s-----fV----------~sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~ 134 (388)
+.+.. +.+.++|+|+|.+. .. .+.+-+.++.+.+.+ .++++|| -|-|++-+. ..+..-
T Consensus 280 t~e~a-~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~--~~iPVIa~GGI~~~~di~--kal~~G 354 (490)
T 4avf_A 280 TAEAA-KALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEG--TGVPLIADGGIRFSGDLA--KAMVAG 354 (490)
T ss_dssp SHHHH-HHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT--TTCCEEEESCCCSHHHHH--HHHHHT
T ss_pred cHHHH-HHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhcc--CCCcEEEeCCCCCHHHHH--HHHHcC
Confidence 34555 67788999999983 22 223334455554433 2578888 454443331 122223
Q ss_pred cCceeecCCcccCC
Q 016513 135 TDSFMVARGDLGME 148 (388)
Q Consensus 135 ~Dgi~igrgDLg~e 148 (388)
+|++|+|+.=++.+
T Consensus 355 Ad~V~vGs~~~~~~ 368 (490)
T 4avf_A 355 AYCVMMGSMFAGTE 368 (490)
T ss_dssp CSEEEECTTTTTBT
T ss_pred CCeeeecHHHhcCC
Confidence 89999997665544
No 439
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=29.21 E-value=64 Score=27.61 Aligned_cols=55 Identities=9% Similarity=0.118 Sum_probs=40.3
Q ss_pred HHhHhhHHHHHhh---cC--ceeecCCcc----cCCCChhhHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 122 QEGVVNFDDILRE---TD--SFMVARGDL----GMEIPVEKIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 122 ~~av~nldeI~~~---~D--gi~igrgDL----g~e~~~~~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
...+.+++.+++. .| .|++|-.|+ ....+.+.+....+.+++.++++|..+++.|
T Consensus 57 ~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~ 120 (240)
T 3mil_A 57 RWALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIG 120 (240)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEc
Confidence 4456667766653 45 455667788 4566778888888999999999998888754
No 440
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=29.17 E-value=1.4e+02 Score=26.53 Aligned_cols=44 Identities=9% Similarity=0.028 Sum_probs=30.8
Q ss_pred CHHHHHhccccCCCCEEEeCCCCCh----hhHHHHHHHHccCCCCceE
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKG----SDLVNVRKVLGPHAKNIQL 115 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa----~dv~~v~~~l~~~~~~~~I 115 (388)
+..+..+.+.+.|+|+|=+..-... ++++++++.+.+.|-.+..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 3444337788899999988754422 6788999999887655443
No 441
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=29.11 E-value=2e+02 Score=22.35 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=45.2
Q ss_pred HHHHHHhcCCcEEEEEcC----Cch-HHHHHHhhCCCCcEEEEEeccccCCCCCCcCCCcccccccccccccEEEEeCCC
Q 016513 264 AVRTANKARAKLIVVLTR----GGT-TAKLVAKYRPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILAEGS 338 (388)
Q Consensus 264 Av~~A~~l~A~aIvv~T~----sG~-tA~~vSk~RP~~pIiav~~p~~~tt~~~w~~~~~~~aR~l~l~~GV~P~l~~~~ 338 (388)
|.+...+...+.|++-.. +|. ..+.+.+..|.+||+.+ |. ........-.+-.|+.-++.++
T Consensus 53 a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~-------s~-----~~~~~~~~~~~~~g~~~~l~Kp- 119 (152)
T 3eul_A 53 ALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLI-------SA-----HDEPAIVYQALQQGAAGFLLKD- 119 (152)
T ss_dssp HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEE-------ES-----CCCHHHHHHHHHTTCSEEEETT-
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEE-------Ec-----cCCHHHHHHHHHcCCCEEEecC-
Confidence 344444557787777543 443 45566677899999999 30 2222223334566888888875
Q ss_pred CcCCCccCHHHHHHHHHHHHHHcCC
Q 016513 339 AKATDAESTEVILEGALKSAIEKGL 363 (388)
Q Consensus 339 ~~~~~~~~~e~~i~~a~~~~~~~g~ 363 (388)
.+.+.+. .+++.+.+.+.
T Consensus 120 ------~~~~~l~-~~i~~~~~~~~ 137 (152)
T 3eul_A 120 ------STRTEIV-KAVLDCAKGRD 137 (152)
T ss_dssp ------CCHHHHH-HHHHHHHHCC-
T ss_pred ------CCHHHHH-HHHHHHHcCCe
Confidence 2344443 34455554443
No 442
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=28.94 E-value=1.6e+02 Score=27.60 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=70.7
Q ss_pred CCCCEEEeCCCCC--------------hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCC
Q 016513 83 NNIDMIALSFVRK--------------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGME 148 (388)
Q Consensus 83 ~g~d~v~~sfV~s--------------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e 148 (388)
.+..+|+-+..+. .+-++.++++..+. .+.+++-+-.++.++-+ .+.+|.+-||.+++-
T Consensus 50 ~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~--Glp~~Tev~d~~~v~~l---~~~vd~lqIgA~~~~-- 122 (285)
T 3sz8_A 50 LGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF--GVPVITDVHEAEQAAPV---AEIADVLQVPAFLAR-- 122 (285)
T ss_dssp HTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHH---HTTCSEEEECGGGTT--
T ss_pred heeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHH---HHhCCEEEECccccC--
Confidence 4577777753332 35677788877665 36788877777666544 455899999966542
Q ss_pred CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHH-cCCceeEeccccC
Q 016513 149 IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVL-DGTDCVMLSGESA 214 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~-~g~d~i~Ls~eta 214 (388)
..+ +++++.+.||||++.|.|. -|..|+...+..+. .|.+=++|..=+.
T Consensus 123 ----n~~-----LLr~va~~gkPVilK~G~~--------~t~~ei~~ave~i~~~Gn~~i~L~erg~ 172 (285)
T 3sz8_A 123 ----QTD-----LVVAIAKAGKPVNVKKPQF--------MSPTQLKHVVSKCGEVGNDRVMLCERGS 172 (285)
T ss_dssp ----CHH-----HHHHHHHTSSCEEEECCTT--------SCGGGTHHHHHHHHHTTCCCEEEEECCE
T ss_pred ----CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 222 5555667899999866542 35667777777664 4777777754333
No 443
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=28.80 E-value=73 Score=28.31 Aligned_cols=86 Identities=21% Similarity=0.156 Sum_probs=51.1
Q ss_pred HHHHhccccCCCCEEEeCCCC-----ChhhHHHHHHHHccCCCCceEEE--eecCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 74 EDILRWGVPNNIDMIALSFVR-----KGSDLVNVRKVLGPHAKNIQLMS--KVENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sfV~-----sa~dv~~v~~~l~~~~~~~~Iia--kIEt~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
+.+ +.+.+.|++.|++.-.. +.-+...++++.... ++++++ =|-+ .+++.++.+. +||+++|++=+
T Consensus 156 e~~-~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~--~ipvia~GGI~~---~~d~~~~~~~Gadgv~vgsal~ 229 (252)
T 1ka9_F 156 EWA-VKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAV--GVPVIASGGAGR---MEHFLEAFQAGAEAALAASVFH 229 (252)
T ss_dssp HHH-HHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHH
T ss_pred HHH-HHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHc--CCCEEEeCCCCC---HHHHHHHHHCCCHHHHHHHHHH
Confidence 444 66778899988765221 111344444433222 466666 2333 3566666665 89999999877
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCE
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPV 172 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpv 172 (388)
....++++. .+.++..|.|+
T Consensus 230 ~~~~~~~~~-------~~~l~~~~~~~ 249 (252)
T 1ka9_F 230 FGEIPIPKL-------KRYLAEKGVHV 249 (252)
T ss_dssp TTSSCHHHH-------HHHHHHTTCCB
T ss_pred cCCCCHHHH-------HHHHHHCCCCc
Confidence 777665543 33466777775
No 444
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=28.58 E-value=1.2e+02 Score=27.22 Aligned_cols=101 Identities=9% Similarity=-0.087 Sum_probs=55.2
Q ss_pred CHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee------cCHHhHhhHHHHHhh-----cCceee
Q 016513 72 DKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV------ENQEGVVNFDDILRE-----TDSFMV 140 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI------Et~~av~nldeI~~~-----~Dgi~i 140 (388)
+....++.+.+.|.|+|=+..-- . +++++++.+.+.|-.+..+.-- ...++++.+...++. ++.+.+
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~ 109 (301)
T 3cny_A 32 NLQQLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVV 109 (301)
T ss_dssp CHHHHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEe
Confidence 33443377888899999776332 3 7889999998877554433110 012344455555543 345554
Q ss_pred cC------CcccCCC----------ChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 141 AR------GDLGMEI----------PVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 141 gr------gDLg~e~----------~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
.+ |.....+ .++.+...-+++...|.++|..+.+
T Consensus 110 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 110 SEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp EECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 43 2221111 1234445556677777777776554
No 445
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=28.43 E-value=1.9e+02 Score=27.97 Aligned_cols=117 Identities=14% Similarity=0.166 Sum_probs=67.3
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|+..|.++.+. .|..+....+...-..|++.+...+ .| -++++...+++++- ..++.
T Consensus 126 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~~~~~~-g~~~v 187 (398)
T 4d9i_A 126 GVAWAAQQLGQNAVIY-----------MPKGSAQERVDAILNLGAECIVTDM-----NY-DDTVRLTMQHAQQH-GWEVV 187 (398)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECTTCCHHHHHHHHTTTCEEEECSS-----CH-HHHHHHHHHHHHHH-TCEEC
T ss_pred HHHHHHHHcCCCEEEE-----------EeCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHHc-CCEEe
Confidence 4566789999998763 1333333445666778999876643 23 46777666665442 11110
Q ss_pred HHHHHHHHhcCCCCCC-----chhHHHHHHHHHHHhcC-----CcEEEEEcCCchHHHHHHhh------CCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMS-----PLESLASSAVRTANKAR-----AKLIVVLTRGGTTAKLVAKY------RPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~-----~~~~ia~aAv~~A~~l~-----A~aIvv~T~sG~tA~~vSk~------RP~~pIiav 301 (388)
.+ ..-.+.+ ...-....+.++.++++ .+.|++.+-+|.|+--++++ .|...|+++
T Consensus 188 ~~-------~~~~g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigV 258 (398)
T 4d9i_A 188 QD-------TAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIV 258 (398)
T ss_dssp CS-------SCBTTBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred cC-------cccCCcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 00 0000011 11222334456666653 68999999999987766654 367888888
No 446
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=28.42 E-value=2.6e+02 Score=26.23 Aligned_cols=90 Identities=13% Similarity=0.017 Sum_probs=54.7
Q ss_pred cCceeecCCc--ccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCceeEecc
Q 016513 135 TDSFMVARGD--LGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTDCVMLSG 211 (388)
Q Consensus 135 ~Dgi~igrgD--Lg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d~i~Ls~ 211 (388)
+||+++. |- =+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+.+ .|-..|+|++|+..
T Consensus 59 v~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 59 VHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAH-RVPTIVSV---------SDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp CSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 6898875 21 12334445555555555555432 47887654 233444554444 46678999999975
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHhc
Q 016513 212 ESAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 212 eta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
=--..--+.+.++..+.|+..+.-
T Consensus 128 P~y~~~s~~~l~~~f~~va~a~~l 151 (315)
T 3na8_A 128 ISYWKLNEAEVFQHYRAVGEAIGV 151 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 544444467888888888877653
No 447
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=28.42 E-value=2.1e+02 Score=26.77 Aligned_cols=95 Identities=17% Similarity=0.156 Sum_probs=54.7
Q ss_pred HHHHhh-cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHH-HHHHcCCc
Q 016513 129 DDILRE-TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVA-NAVLDGTD 205 (388)
Q Consensus 129 deI~~~-~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~-~av~~g~d 205 (388)
+-.++. +||+++. ---=+..+..++-..+.+..++.++ -..|++..+- . +-.|.-+.+ .|-..|+|
T Consensus 40 ~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg---------~-st~~ai~la~~A~~~Gad 108 (314)
T 3d0c_A 40 EFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-GRATVVAGIG---------Y-SVDTAIELGKSAIDSGAD 108 (314)
T ss_dssp HHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC---------S-SHHHHHHHHHHHHHTTCS
T ss_pred HHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEecCC---------c-CHHHHHHHHHHHHHcCCC
Confidence 334443 6898874 1112234455555555555555543 2468876542 3 334554444 46677999
Q ss_pred eeEeccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 206 CVMLSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 206 ~i~Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
++|+..=--..--+.+.++..+.|+..+.
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 109 CVMIHQPVHPYITDAGAVEYYRNIIEALD 137 (314)
T ss_dssp EEEECCCCCSCCCHHHHHHHHHHHHHHSS
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99997543333345667778888877655
No 448
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=28.42 E-value=3e+02 Score=23.99 Aligned_cols=106 Identities=5% Similarity=0.013 Sum_probs=58.2
Q ss_pred HHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh----cCceeecCCcccCC
Q 016513 73 KEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE----TDSFMVARGDLGME 148 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~----~Dgi~igrgDLg~e 148 (388)
.+++ +.+++.|+|++..|. .+ .++.+.++..+ +.++.-+.| .+|+.++ +|.+-+-++. .
T Consensus 73 ~d~~-~~A~~~GAd~v~~~~-~d-~~v~~~~~~~g-----~~~i~G~~t------~~e~~~A~~~Gad~v~~fpa~---~ 135 (207)
T 2yw3_A 73 PKEA-EAALEAGAAFLVSPG-LL-EEVAALAQARG-----VPYLPGVLT------PTEVERALALGLSALKFFPAE---P 135 (207)
T ss_dssp HHHH-HHHHHHTCSEEEESS-CC-HHHHHHHHHHT-----CCEEEEECS------HHHHHHHHHTTCCEEEETTTT---T
T ss_pred HHHH-HHHHHcCCCEEEcCC-CC-HHHHHHHHHhC-----CCEEecCCC------HHHHHHHHHCCCCEEEEecCc---c
Confidence 3555 678899999999984 33 34433333332 334444444 4444332 7888774421 1
Q ss_pred C-ChhhHHHHHHHHHHHHHHc-CCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCC
Q 016513 149 I-PVEKIFLAQKMMIYKCNLV-GKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAA 215 (388)
Q Consensus 149 ~-~~~~v~~~qk~ii~~c~~~-gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~ 215 (388)
+ |++.+ + ..+... +.|++- +.=+ .+ .++..++..|+|++...+--..
T Consensus 136 ~gG~~~l----k---~l~~~~~~ipvva-iGGI-------~~-----~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 136 FQGVRVL----R---AYAEVFPEVRFLP-TGGI-------KE-----EHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp TTHHHHH----H---HHHHHCTTCEEEE-BSSC-------CG-----GGHHHHHTCSSBSCEEESGGGS
T ss_pred ccCHHHH----H---HHHhhCCCCcEEE-eCCC-------CH-----HHHHHHHhCCCcEEEEehhhhC
Confidence 2 22221 1 222234 678764 3222 11 3568889999999998765433
No 449
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=28.41 E-value=1.1e+02 Score=27.13 Aligned_cols=77 Identities=9% Similarity=0.078 Sum_probs=41.9
Q ss_pred EEeCCCCCh---hhHHHHHHHHccCCCCceEEEeecCHH-hHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHH
Q 016513 88 IALSFVRKG---SDLVNVRKVLGPHAKNIQLMSKVENQE-GVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMI 162 (388)
Q Consensus 88 v~~sfV~sa---~dv~~v~~~l~~~~~~~~IiakIEt~~-av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii 162 (388)
+++|...++ +-++.+.+.+.+.|-++.++.- .+.+ -.+.++.+++. +|||++.+.|.. .....+
T Consensus 7 ~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~----------~~~~~~ 75 (306)
T 8abp_A 7 FLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPK----------LGSAIV 75 (306)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGG----------GHHHHH
T ss_pred EEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCch----------hhHHHH
Confidence 445555443 2233344455555555444332 2322 33455555543 799999865532 123345
Q ss_pred HHHHHcCCCEEEh
Q 016513 163 YKCNLVGKPVVTA 175 (388)
Q Consensus 163 ~~c~~~gkpvi~a 175 (388)
+.++++|+|+++.
T Consensus 76 ~~~~~~~iPvV~~ 88 (306)
T 8abp_A 76 AKARGYDMKVIAV 88 (306)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHCCCcEEEe
Confidence 6678899999864
No 450
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=28.34 E-value=2.5e+02 Score=24.45 Aligned_cols=77 Identities=10% Similarity=0.037 Sum_probs=40.7
Q ss_pred EEEeCCCCCh---hhHHHHHHHHccCCCCceEEEeecCHHh-HhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHH
Q 016513 87 MIALSFVRKG---SDLVNVRKVLGPHAKNIQLMSKVENQEG-VVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMM 161 (388)
Q Consensus 87 ~v~~sfV~sa---~dv~~v~~~l~~~~~~~~IiakIEt~~a-v~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~i 161 (388)
++++|...++ +-+..+.+.+.+.|-++.+..-=++.+. .+.++.+.+. .|||++.+.+. ...
T Consensus 11 gvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-------------~~~ 77 (276)
T 3jy6_A 11 AVIVANIDDYFSTELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN-------------PQT 77 (276)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC-------------HHH
T ss_pred EEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc-------------HHH
Confidence 3455555443 2233444555566655544332222222 2233444432 79999976553 245
Q ss_pred HHHHHHcCCCEEEhh
Q 016513 162 IYKCNLVGKPVVTAT 176 (388)
Q Consensus 162 i~~c~~~gkpvi~at 176 (388)
++.+.+.|+|+++..
T Consensus 78 ~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 78 VQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHTTSSCEEEES
T ss_pred HHHHHHCCCCEEEEe
Confidence 567778899988643
No 451
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=28.25 E-value=2.1e+02 Score=26.08 Aligned_cols=44 Identities=14% Similarity=0.055 Sum_probs=30.5
Q ss_pred hCHHHHHhccccCCCCEEEeCC----CC------ChhhHHHHHHHHccCCCCce
Q 016513 71 KDKEDILRWGVPNNIDMIALSF----VR------KGSDLVNVRKVLGPHAKNIQ 114 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sf----V~------sa~dv~~v~~~l~~~~~~~~ 114 (388)
.+....++.+.+.|.|+|=+.. .. +.+++.++++.+.+.|-.+.
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 15 LPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp SCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 3444433788889999998764 22 34568899999988775543
No 452
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=28.15 E-value=1.3e+02 Score=28.42 Aligned_cols=93 Identities=16% Similarity=0.057 Sum_probs=51.3
Q ss_pred CHHHHHhccccCCCCEEEeCCCC-----------C----------------hhhHHHHHHHHccCCCCceEEE--eecCH
Q 016513 72 DKEDILRWGVPNNIDMIALSFVR-----------K----------------GSDLVNVRKVLGPHAKNIQLMS--KVENQ 122 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~-----------s----------------a~dv~~v~~~l~~~~~~~~Iia--kIEt~ 122 (388)
..++. +.+.+.|+|+|.++.-. . .+-+.++++.+ + ++.||+ .|-|.
T Consensus 194 ~~e~a-~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~---~-~ipvia~GGI~~~ 268 (332)
T 1vcf_A 194 SREAA-LALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVL---P-HLPLVASGGVYTG 268 (332)
T ss_dssp CHHHH-HHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHC---S-SSCEEEESSCCSH
T ss_pred CHHHH-HHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhc---C-CCeEEEECCCCCH
Confidence 34566 77889999999997531 1 11123333333 1 467777 56555
Q ss_pred HhHhhHHHHHhhcCceeecCCcccCC-CChh----hHHHHHHHHHHHHHHcCCC
Q 016513 123 EGVVNFDDILRETDSFMVARGDLGME-IPVE----KIFLAQKMMIYKCNLVGKP 171 (388)
Q Consensus 123 ~av~nldeI~~~~Dgi~igrgDLg~e-~~~~----~v~~~qk~ii~~c~~~gkp 171 (388)
+-+ ++.|..-+|++++||.=|-.. -|.+ .+..+.+.+-..+...|..
T Consensus 269 ~d~--~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~ 320 (332)
T 1vcf_A 269 TDG--AKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGAR 320 (332)
T ss_dssp HHH--HHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHH--HHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 443 333333489999999765221 1332 2334444555555555544
No 453
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=28.14 E-value=2.3e+02 Score=24.52 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=25.2
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKN 112 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~ 112 (388)
+.+.+.|.|+|=+.+- ...+++++++.+.+.|-.
T Consensus 22 ~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~ 55 (260)
T 1k77_A 22 AAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHLT 55 (260)
T ss_dssp HHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTCE
T ss_pred HHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCCc
Confidence 6677889999988753 345688888888776644
No 454
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=28.13 E-value=2e+02 Score=26.17 Aligned_cols=104 Identities=8% Similarity=-0.079 Sum_probs=64.0
Q ss_pred CHHHHHhccccCCCCEEEeCCC----CChhhHHHHHHHHccCCCCceEE-Eee-----cC--------------HHhHhh
Q 016513 72 DKEDILRWGVPNNIDMIALSFV----RKGSDLVNVRKVLGPHAKNIQLM-SKV-----EN--------------QEGVVN 127 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV----~sa~dv~~v~~~l~~~~~~~~Ii-akI-----Et--------------~~av~n 127 (388)
+.....+.+.++|.|+|=+..- -...+++++++.+.+.|-.+..+ +-. .+ .+.++.
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 109 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEY 109 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHH
Confidence 5544448888999999987642 13457889999998876554322 111 11 345677
Q ss_pred HHHHHhh-----cCceeecCCccc-CCCChhhHHHHHHHHHHHHHHcCCC--EEEh
Q 016513 128 FDDILRE-----TDSFMVARGDLG-MEIPVEKIFLAQKMMIYKCNLVGKP--VVTA 175 (388)
Q Consensus 128 ldeI~~~-----~Dgi~igrgDLg-~e~~~~~v~~~qk~ii~~c~~~gkp--vi~a 175 (388)
++..++. ++.|.+..+.-. .+-.++.+...-+++.+.|.++|.. +.+=
T Consensus 110 ~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 110 WKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp HHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 7777765 356665422110 1112235556667889999999999 7653
No 455
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=27.92 E-value=1.3e+02 Score=26.54 Aligned_cols=71 Identities=10% Similarity=0.050 Sum_probs=44.3
Q ss_pred hccccCCCCEEEeCCCC--------ChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-------cCceeecC
Q 016513 78 RWGVPNNIDMIALSFVR--------KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-------TDSFMVAR 142 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~--------sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-------~Dgi~igr 142 (388)
+.+.+.|+++|++.-.. +-+-++++++.+ ++++||- =-....+++.++.+. +||+++|+
T Consensus 151 ~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~-----~iPvia~-GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 151 KRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEA-----EVKVLAA-GGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHH-----TCEEEEE-SSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred HHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhc-----CCcEEEE-CCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 56778999988885432 223344444433 4677762 112224566666665 89999999
Q ss_pred CcccCCCChhhH
Q 016513 143 GDLGMEIPVEKI 154 (388)
Q Consensus 143 gDLg~e~~~~~v 154 (388)
+=+...++++++
T Consensus 225 al~~~~~~~~~~ 236 (241)
T 1qo2_A 225 AFLEGILTVEVM 236 (241)
T ss_dssp HHHTTSSCHHHH
T ss_pred HHHcCCCCHHHH
Confidence 888777776654
No 456
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=27.79 E-value=1.1e+02 Score=29.07 Aligned_cols=85 Identities=11% Similarity=0.233 Sum_probs=0.0
Q ss_pred CCChhhHHHHHHHHccCCCCceEEEeecCH------HhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHH
Q 016513 93 VRKGSDLVNVRKVLGPHAKNIQLMSKVENQ------EGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKC 165 (388)
Q Consensus 93 V~sa~dv~~v~~~l~~~~~~~~IiakIEt~------~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c 165 (388)
+...+-+..++..... +.+..|+|+.|.. +++++.....++ +|+||+ +-..-...+-+.|
T Consensus 141 ~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~------------e~~~~~~~~~~i~ 207 (305)
T 3ih1_A 141 VTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFP------------EALQSEEEFRLFN 207 (305)
T ss_dssp CCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE------------TTCCSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE------------cCCCCHHHHHHHH
Q ss_pred HHcCCCEEEhhhHHHHhhcC---CCCChHHHHHH
Q 016513 166 NLVGKPVVTATQMLESMIKS---PRPTRAEATDV 196 (388)
Q Consensus 166 ~~~gkpvi~atq~lesM~~~---~~ptraEv~dv 196 (388)
++..+|++. .|+.. |.++.+|..+.
T Consensus 208 ~~~~~P~~~------n~~~~g~tp~~~~~eL~~l 235 (305)
T 3ih1_A 208 SKVNAPLLA------NMTEFGKTPYYSAEEFANM 235 (305)
T ss_dssp HHSCSCBEE------ECCTTSSSCCCCHHHHHHT
T ss_pred HHcCCCEEE------eecCCCCCCCCCHHHHHHc
No 457
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=27.70 E-value=2e+02 Score=25.88 Aligned_cols=42 Identities=10% Similarity=0.135 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhhCCCCcEEEE
Q 016513 259 SLASSAVRTANKARAKLIVVLTR---------GGTTAKLVAKYRPAVPILSV 301 (388)
Q Consensus 259 ~ia~aAv~~A~~l~A~aIvv~T~---------sG~tA~~vSk~RP~~pIiav 301 (388)
..+...++.|.+.+++.||+-++ -|.++..+.+.-| ||++.+
T Consensus 98 ~~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv 148 (319)
T 3olq_A 98 RPYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCP-APVWMV 148 (319)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCS-SCEEEE
T ss_pred ChHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCC-CCEEEe
Confidence 34566677788889999998775 3788888887765 999999
No 458
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=27.70 E-value=85 Score=28.16 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=40.2
Q ss_pred eecCCCccccCCCCCEEEEeCCeEEEEEEEEeCCCCeEEEEEc-------cCeeecCCCccccC
Q 016513 3 TMSYKKLPVDVKPGNTILCADGTITLTVLSCDPKSGTVRCRCE-------NTAMLGERKNVNLP 59 (388)
Q Consensus 3 ~~~~~~~~~~~~~gd~i~iddG~i~l~v~~~~~~~~~i~~~v~-------~~g~l~~~k~vn~p 59 (388)
.+..+.+.+.++.||.|-+|. +.|.|.++ +++.+.+-+. +=|.++.+..||+.
T Consensus 26 ~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~--~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (208)
T 1kzl_A 26 KIEAPQILDDCHTGDSIAVNG--TCLTVTDF--DRYHFTVGIAPESLRLTNLGQCKAGDPVNLE 85 (208)
T ss_dssp EEECGGGCTTCCTTCEEEETT--EEEEEEEE--CSSEEEEEECHHHHHHSSGGGCCTTCEEEEE
T ss_pred EEechHHhcccCCCCEEEECC--EEeeEEEE--cCCEEEEEEeHHHHhhccccccCCCCEEEec
Confidence 344456779999999999987 78999976 6677877775 34667777778874
No 459
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=27.53 E-value=1.1e+02 Score=28.08 Aligned_cols=70 Identities=11% Similarity=0.132 Sum_probs=39.4
Q ss_pred CCCCCEEEEeCC---eEEEEEEEEeCCCCeEEEEEccCeeecCCCccccCCccccCC-CCChh-CH-HHHHhccccCCCC
Q 016513 13 VKPGNTILCADG---TITLTVLSCDPKSGTVRCRCENTAMLGERKNVNLPGVVVDLP-TLTEK-DK-EDILRWGVPNNID 86 (388)
Q Consensus 13 ~~~gd~i~iddG---~i~l~v~~~~~~~~~i~~~v~~~g~l~~~k~vn~p~~~~~~~-~lt~~-D~-~di~~~~l~~g~d 86 (388)
+++||.|.+-|| ....++.++ +.+.+.+++..--..... |...+.+- .++.. |+ +.+++.+.+.|++
T Consensus 33 l~~Gd~v~l~dg~g~~~~a~I~~i--~~~~~~~~i~~~~~~~~e-----~~~~i~L~~al~K~~dr~d~iiqKatELGV~ 105 (257)
T 3kw2_A 33 MQAGDRLRLTDGRGSFFDAVIETA--DRKSCYVSVCGQESWQKP-----WRDRITIAIAPTKQSERMEWMLEKLVEIGVD 105 (257)
T ss_dssp CCTTCEEEEECSBSEEEEEEEEEE--CSSCEEEEEEEEEECCCS-----SCSCEEEEECCCSSHHHHHHHHHHHHHHCCS
T ss_pred CCCCCEEEEEECCCCEEEEEEEEe--eCCEEEEEEEEecccCCC-----CCCceEEEEecCCCcchHHHHHHHHHhhCCC
Confidence 578999999875 345667755 566777776542221111 11122211 22331 42 3334889999999
Q ss_pred EEE
Q 016513 87 MIA 89 (388)
Q Consensus 87 ~v~ 89 (388)
-|.
T Consensus 106 ~I~ 108 (257)
T 3kw2_A 106 EVV 108 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 774
No 460
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=27.49 E-value=75 Score=30.80 Aligned_cols=18 Identities=28% Similarity=0.357 Sum_probs=12.6
Q ss_pred HHHHhccccCCCCEEEeCC
Q 016513 74 EDILRWGVPNNIDMIALSF 92 (388)
Q Consensus 74 ~di~~~~l~~g~d~v~~sf 92 (388)
++. +.+.+.|+|+|.++.
T Consensus 229 e~A-~~a~~~GaD~I~vsn 246 (352)
T 3sgz_A 229 EDA-ELAMKHNVQGIVVSN 246 (352)
T ss_dssp HHH-HHHHHTTCSEEEECC
T ss_pred HHH-HHHHHcCCCEEEEeC
Confidence 444 666778888888754
No 461
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=27.42 E-value=3.1e+02 Score=25.21 Aligned_cols=91 Identities=19% Similarity=0.139 Sum_probs=54.5
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHH-HHHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDV-ANAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv-~~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.++. ..|++..+ ...+-.|.-+. ..|-..|+|++|+..=
T Consensus 36 v~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 36 TNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK-RIPIIAGT---------GANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred CCEEEECccccccccCCHHHHHHHHHHHHHHhCC-CCeEEEeC---------CCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 7998875 11122345555655555555555542 36887644 23334455444 4466779999999754
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhc
Q 016513 213 SAAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 213 ta~G~~P~~~v~~~~~i~~~aE~ 235 (388)
--..--+.+.++..+.|+..+.-
T Consensus 106 ~y~~~~~~~l~~~f~~ia~a~~l 128 (291)
T 3tak_A 106 YYNKPTQEGLYQHYKAIAEAVEL 128 (291)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCHHHHHHHHHHHHHhcCC
Confidence 33333356778888888877653
No 462
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=27.18 E-value=3.7e+02 Score=25.00 Aligned_cols=90 Identities=11% Similarity=0.043 Sum_probs=52.5
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHH-HHHHHHcCCceeEeccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATD-VANAVLDGTDCVMLSGE 212 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~d-v~~av~~g~d~i~Ls~e 212 (388)
+||+++. ---=+..+..++-..+.+..++.++ -..|++..| ...+-.|.-+ ...|-..|+|++|+..=
T Consensus 43 v~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGv---------g~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 43 SDGLCILANFSEQFAITDDERDVLTRTILEHVA-GRVPVIVTT---------SHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp CSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEEC---------CCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCEEEECccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 7998884 1112234445554455555555442 246888654 2333445544 44577789999999742
Q ss_pred cCC----CCCHHHHHHHHHHHHHHHhc
Q 016513 213 SAA----GAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 213 ta~----G~~P~~~v~~~~~i~~~aE~ 235 (388)
.. .--+.+.++..+.|+..+.-
T Consensus 113 -yy~~~~~~s~~~l~~~f~~va~a~~l 138 (309)
T 3fkr_A 113 -YHGATFRVPEAQIFEFYARVSDAIAI 138 (309)
T ss_dssp -CBTTTBCCCHHHHHHHHHHHHHHCSS
T ss_pred -CCccCCCCCHHHHHHHHHHHHHhcCC
Confidence 22 11256778888888877653
No 463
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=27.10 E-value=1.4e+02 Score=28.10 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=62.8
Q ss_pred CCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEE---hhhHHHHhh--
Q 016513 110 AKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVT---ATQMLESMI-- 183 (388)
Q Consensus 110 ~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~---atq~lesM~-- 183 (388)
+..+++.-........+.+.+-++. ..-+|+... .+|+++=...-+++++.|++.|..|=. .+.--|.-.
T Consensus 78 ~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~ 153 (288)
T 3q94_A 78 NITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDAS----HHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIA 153 (288)
T ss_dssp TCCSCEEEEEEEECSHHHHHHHHHHTCSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGG
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCC
Confidence 3456777777665544433333332 467888532 468888888889999999999987621 000000000
Q ss_pred -cCCCCChHHHHHHHHHH-HcCCceeEeccccCCCCCH
Q 016513 184 -KSPRPTRAEATDVANAV-LDGTDCVMLSGESAAGAYP 219 (388)
Q Consensus 184 -~~~~ptraEv~dv~~av-~~g~d~i~Ls~eta~G~~P 219 (388)
....-+..|+ ..++ .-|+|++-.+-=|+-|.||
T Consensus 154 ~~~~yT~Peea---~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 154 EGVIYADPAEC---KHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp GGCBCCCHHHH---HHHHHHHCCSEEEECSSCBSSCCS
T ss_pred ccccCCCHHHH---HHHHHHHCCCEEEEEcCcccCCcC
Confidence 1112223333 4455 4699999999999999998
No 464
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=27.06 E-value=3.3e+02 Score=25.14 Aligned_cols=90 Identities=11% Similarity=0.135 Sum_probs=58.8
Q ss_pred hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 96 GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 96 a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.+..+.++++..+. .+.+++-+=.+..++-+.+. +|.+-||.+++- ..+ +++++.+.||||++.
T Consensus 72 ~~gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---~d~~kIga~~~~------n~~-----ll~~~a~~~kPV~lk 135 (280)
T 2qkf_A 72 EEGLKIFEKVKAEF--GIPVITDVHEPHQCQPVAEV---CDVIQLPAFLAR------QTD-----LVVAMAKTGNVVNIK 135 (280)
T ss_dssp HHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHHH---CSEEEECGGGTT------BHH-----HHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHhh---CCEEEECccccc------CHH-----HHHHHHcCCCcEEEE
Confidence 35566777766554 46788877777777666554 799999865542 232 455556789999996
Q ss_pred hhHHHHhhcCCCCChHHHHHHHHHHH-cCCceeEe
Q 016513 176 TQMLESMIKSPRPTRAEATDVANAVL-DGTDCVML 209 (388)
Q Consensus 176 tq~lesM~~~~~ptraEv~dv~~av~-~g~d~i~L 209 (388)
|.|- -|..|+...+..+. .|.+-++|
T Consensus 136 ~G~~--------~t~~e~~~A~~~i~~~Gn~~i~L 162 (280)
T 2qkf_A 136 KPQF--------LSPSQMKNIVEKFHEAGNGKLIL 162 (280)
T ss_dssp CCTT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred CCCC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 6543 24567777777655 57644444
No 465
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=26.98 E-value=4.1e+02 Score=25.16 Aligned_cols=102 Identities=12% Similarity=0.056 Sum_probs=60.2
Q ss_pred CHHHHHhccccCCCCEEEeC----CCC--C----hhhHHHHHHHHccCCCCceEEE------------eecC------HH
Q 016513 72 DKEDILRWGVPNNIDMIALS----FVR--K----GSDLVNVRKVLGPHAKNIQLMS------------KVEN------QE 123 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s----fV~--s----a~dv~~v~~~l~~~~~~~~Iia------------kIEt------~~ 123 (388)
+....++.+.+.|+++|-++ +-. + .++++++++.+.+.|-.+.-+. -+-+ ..
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~ 113 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAY 113 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHH
Confidence 44443377888999999876 432 2 5789999999988876554232 1111 23
Q ss_pred hHhhHHHHHhh-----cCceeecCCcccCC--------CChhhHHHHHHHHHHHHHHc--CCCEE
Q 016513 124 GVVNFDDILRE-----TDSFMVARGDLGME--------IPVEKIFLAQKMMIYKCNLV--GKPVV 173 (388)
Q Consensus 124 av~nldeI~~~-----~Dgi~igrgDLg~e--------~~~~~v~~~qk~ii~~c~~~--gkpvi 173 (388)
+++.+...++. ++.+.+..|--+.+ -.++.+...-+++...|.++ |..+.
T Consensus 114 ~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~ 178 (387)
T 1bxb_A 114 ALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFA 178 (387)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 45555555554 35565555421111 12245666667888888887 55544
No 466
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=26.96 E-value=2.4e+02 Score=26.41 Aligned_cols=90 Identities=9% Similarity=0.100 Sum_probs=59.3
Q ss_pred hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 96 GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 96 a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.+.++.+++++.+. .+.+++-+-.+..++-+.+ .+|.+-||.+++-. .+ +++++.+.||||++.
T Consensus 75 ~~gl~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~n------~~-----Ll~~~a~~~kPV~lk 138 (292)
T 1o60_A 75 EEGLKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLARQ------TD-----LVEAMAKTGAVINVK 138 (292)
T ss_dssp HHHHHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTTC------HH-----HHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECcccccC------HH-----HHHHHHcCCCcEEEe
Confidence 45566777776554 4788888877777766655 57999999766532 22 555556889999996
Q ss_pred hhHHHHhhcCCCCChHHHHHHHHHHH-cCCceeEe
Q 016513 176 TQMLESMIKSPRPTRAEATDVANAVL-DGTDCVML 209 (388)
Q Consensus 176 tq~lesM~~~~~ptraEv~dv~~av~-~g~d~i~L 209 (388)
|.|. -|..|+...+..+. .|.+-++|
T Consensus 139 ~G~~--------~t~~ei~~Av~~i~~~Gn~~i~L 165 (292)
T 1o60_A 139 KPQF--------LSPSQMGNIVEKIEECGNDKIIL 165 (292)
T ss_dssp CCTT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred CCCC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 6543 24567777777655 57644444
No 467
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=26.48 E-value=45 Score=29.89 Aligned_cols=69 Identities=14% Similarity=0.128 Sum_probs=42.2
Q ss_pred CHHHHHhccccCCCCEEEeCCCC-----ChhhHHHHHHHHccCCCCceEEEe--ecCHHhHhhHHHHHhh-cCceeecCC
Q 016513 72 DKEDILRWGVPNNIDMIALSFVR-----KGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE-TDSFMVARG 143 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~sfV~-----sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-~Dgi~igrg 143 (388)
|..++++...+.|+|+|.+.-.. ...+...++++.... ++++++. |-|++ .++++++. +|++++|+.
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~---~~~~~l~~Gad~V~ig~~ 110 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKME---HFLEAFLRGADKVSINTA 110 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGC--CSCEEEESCCCSHH---HHHHHHHTTCSEECCSHH
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhC--CCCEEEeCCCCCHH---HHHHHHHcCCCeeehhhH
Confidence 44444477778999999875432 223455555555443 4566664 55543 34445554 899999987
Q ss_pred cc
Q 016513 144 DL 145 (388)
Q Consensus 144 DL 145 (388)
.|
T Consensus 111 ~l 112 (247)
T 3tdn_A 111 AV 112 (247)
T ss_dssp HH
T ss_pred Hh
Confidence 66
No 468
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=26.25 E-value=2.3e+02 Score=24.82 Aligned_cols=102 Identities=19% Similarity=0.236 Sum_probs=57.6
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee---cCH--HhHhhHHHHHhhcCceeecCCcc
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV---ENQ--EGVVNFDDILRETDSFMVARGDL 145 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI---Et~--~av~nldeI~~~~Dgi~igrgDL 145 (388)
.|...+.+.+-+.|++.++++- .+.++-+.+.++..+.. ++....-+ +.. .+++.+++.++ +.-..+-|..
T Consensus 20 ~~~~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~~~~~~p-~~~~~~g~hP~~~~~~~~~~~l~~~~~--~~~~~~iGe~ 95 (265)
T 1yix_A 20 KDVDDVLAKAAARDVKFCLAVA-TTLPSYLHMRDLVGERD-NVVFSCGVHPLNQNDPYDVEDLRRLAA--EEGVVALGET 95 (265)
T ss_dssp SSHHHHHHHHHHTTEEEEEECC-SSHHHHHHHHHHHCSCT-TEEEEECCCTTCCSSCCCHHHHHHHHT--STTEEEEEEE
T ss_pred cCHHHHHHHHHHCCCCEEEEeC-CCHHHHHHHHHHHHHCC-CeEEEEEeCCCcccccchHHHHHHHhc--cCCeEEEEcc
Confidence 4555554677788999987753 45777777777765543 33222222 111 12444454443 2223344555
Q ss_pred cCCCCh--h--hH-HHHHHHHHHHHHHcCCCEEEhh
Q 016513 146 GMEIPV--E--KI-FLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 146 g~e~~~--~--~v-~~~qk~ii~~c~~~gkpvi~at 176 (388)
|+++.. . .. ...-..+++.|++.|+|+.+-+
T Consensus 96 Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~ 131 (265)
T 1yix_A 96 GLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHT 131 (265)
T ss_dssp EEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 655532 1 11 1233567888999999999865
No 469
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=25.98 E-value=3.9e+02 Score=24.57 Aligned_cols=148 Identities=12% Similarity=0.082 Sum_probs=80.0
Q ss_pred ccCeeecCCCccccCCccccCCCCChhCHHHHHhccccCCCCEEEe-----CCCCChhhHHHHHHHHccCCCCceEEEee
Q 016513 45 ENTAMLGERKNVNLPGVVVDLPTLTEKDKEDILRWGVPNNIDMIAL-----SFVRKGSDLVNVRKVLGPHAKNIQLMSKV 119 (388)
Q Consensus 45 ~~~g~l~~~k~vn~p~~~~~~~~lt~~D~~di~~~~l~~g~d~v~~-----sfV~sa~dv~~v~~~l~~~~~~~~IiakI 119 (388)
.++=.++.++ |-..+++..-+..+.....+.+...|+|.|=+ ......+++.++...+++.-.+.++|.-+
T Consensus 30 v~~~~~g~g~----p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~ 105 (276)
T 3o1n_A 30 VRDLVVGEGA----PKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTF 105 (276)
T ss_dssp ETTEEETSSS----CEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEEC
T ss_pred ECCEEeCCCC----cEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4555666654 44444443333333222113444578886643 33344456666555554443456777777
Q ss_pred cCHH-----------hHhhHHHHHhh--cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCC
Q 016513 120 ENQE-----------GVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSP 186 (388)
Q Consensus 120 Et~~-----------av~nldeI~~~--~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~ 186 (388)
-+.. -++-+...++. +|.|= +|+..+ ....+++++.+++.|..+|..-+-+ ..
T Consensus 106 Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyID-------vEl~~~--~~~~~~l~~~a~~~~~kvI~S~Hdf-----~~ 171 (276)
T 3o1n_A 106 RSAKEGGEQALTTGQYIDLNRAAVDSGLVDMID-------LELFTG--DDEVKATVGYAHQHNVAVIMSNHDF-----HK 171 (276)
T ss_dssp CBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEE-------EEGGGC--HHHHHHHHHHHHHTTCEEEEEEEES-----SC
T ss_pred EEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEE-------EECcCC--HHHHHHHHHHHHhCCCEEEEEeecC-----CC
Confidence 5521 12222222322 23322 233221 2467888999999999999865433 45
Q ss_pred CCChHHHHHHHH-HHHcCCceeEec
Q 016513 187 RPTRAEATDVAN-AVLDGTDCVMLS 210 (388)
Q Consensus 187 ~ptraEv~dv~~-av~~g~d~i~Ls 210 (388)
.|+..|+...++ +...|+|.+=+.
T Consensus 172 tP~~~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 172 TPAAEEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 788888865554 557799976553
No 470
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=25.93 E-value=1.7e+02 Score=28.78 Aligned_cols=116 Identities=14% Similarity=0.054 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccch
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDY 239 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~ 239 (388)
.+..+|++.|.++.+. .|..+....+...-..|++.+...+ .| -++++...+++++-...++.
T Consensus 174 avA~~aa~~G~~~~Iv-----------mp~~~~~~k~~~~r~~GA~Vv~v~~-----~~-~~a~~~a~~~a~~~~~~~~i 236 (442)
T 3ss7_X 174 SIGIMSARIGFKVTVH-----------MSADARAWKKAKLRSHGVTVVEYEQ-----DY-GVAVEEGRKAAQSDPNCFFI 236 (442)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEESS-----CH-HHHHHHHHHHHHTCTTEEEC
T ss_pred HHHHHHHHhCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECC-----CH-HHHHHHHHHHHHhCCCceeC
Confidence 4566799999998763 2333333456667788999776643 23 56776666654321111111
Q ss_pred HHHHHHHHhcCCCCCCchhHHHHHHHHHHHhcC-----Cc-----EEEEEcCCchHHHHHHh-----hCCCCcEEEE
Q 016513 240 RAVFKEMIRSTPLPMSPLESLASSAVRTANKAR-----AK-----LIVVLTRGGTTAKLVAK-----YRPAVPILSV 301 (388)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~ia~aAv~~A~~l~-----A~-----aIvv~T~sG~tA~~vSk-----~RP~~pIiav 301 (388)
. ...+.....-....+.++.++++ .+ .|++.+-+|.++--+++ +.|.+.|+++
T Consensus 237 ~---------~~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigV 304 (442)
T 3ss7_X 237 D---------DENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFA 304 (442)
T ss_dssp C---------TTTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred C---------CCChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEE
Confidence 0 00011122333445566666553 34 89999999988776554 3799999998
No 471
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=25.90 E-value=1.9e+02 Score=30.41 Aligned_cols=96 Identities=15% Similarity=0.129 Sum_probs=68.7
Q ss_pred hhCHHHHHhccccCCCCEEEeCCC------------CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh---
Q 016513 70 EKDKEDILRWGVPNNIDMIALSFV------------RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--- 134 (388)
Q Consensus 70 ~~D~~di~~~~l~~g~d~v~~sfV------------~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--- 134 (388)
+.-+.-| .||.++|.++|++--- ....|++++.++.+++| +.|+.--|+..=-+++++.++.
T Consensus 309 ~~~k~yI-DfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kg--V~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 309 PTYKAYI-DFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKN--VGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp HHHHHHH-HHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTT--CEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcC--CEEEEEeeCcchHHHHHHHHHHHHH
Confidence 3346667 9999999999997211 01257999999998765 6777777775434457777765
Q ss_pred --cCceeec---CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 135 --TDSFMVA---RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 135 --~Dgi~ig---rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
.+||-++ |+| ..+.....+++++|++++.-|...
T Consensus 386 ~Gv~gvK~Df~~~~~-------Q~~v~~y~~i~~~aA~~~l~V~fH 424 (641)
T 3a24_A 386 MGVKGFKVDFMDRDD-------QEMTAFNYRAAEMCAKYKLILDLH 424 (641)
T ss_dssp HTCCEEEEECCCCCS-------HHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCCEEEECCCCCCc-------HHHHHHHHHHHHHHHHcCCEEEcC
Confidence 5888775 333 466677789999999999887763
No 472
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=25.81 E-value=1.2e+02 Score=27.80 Aligned_cols=78 Identities=5% Similarity=0.025 Sum_probs=44.3
Q ss_pred EEeCCCCC----hhhHHHHHHHHccCCCCceEEEeecCHH-hHhhHHHHHh---hcCceeecCCcccCCCChhhHHHHHH
Q 016513 88 IALSFVRK----GSDLVNVRKVLGPHAKNIQLMSKVENQE-GVVNFDDILR---ETDSFMVARGDLGMEIPVEKIFLAQK 159 (388)
Q Consensus 88 v~~sfV~s----a~dv~~v~~~l~~~~~~~~IiakIEt~~-av~nldeI~~---~~Dgi~igrgDLg~e~~~~~v~~~qk 159 (388)
+++|...+ .+-++.+.+.+.+.|-++.+..-=.+.+ -.+.++.+++ -.|||++.+ +- . ...
T Consensus 8 ~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~----~------~~~ 76 (350)
T 3h75_A 8 FLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQ----Y------VAP 76 (350)
T ss_dssp EEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CS----S------HHH
T ss_pred EECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-ch----h------hHH
Confidence 45555554 2334445555555555544432111222 2556777777 589999964 21 0 224
Q ss_pred HHHHHHHHcCCCEEEhh
Q 016513 160 MMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~at 176 (388)
.+++.+.++|+|+++..
T Consensus 77 ~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 77 QILRLSQGSGIKLFIVN 93 (350)
T ss_dssp HHHHHHTTSCCEEEEEE
T ss_pred HHHHHHHhCCCcEEEEc
Confidence 56678889999998743
No 473
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=25.80 E-value=1.7e+02 Score=27.96 Aligned_cols=92 Identities=13% Similarity=0.054 Sum_probs=57.7
Q ss_pred ChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh--cCceeecCCccc
Q 016513 69 TEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE--TDSFMVARGDLG 146 (388)
Q Consensus 69 t~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~--~Dgi~igrgDLg 146 (388)
+..+...+.+..-+.|+ +|=-|+- +.+...++++.+ .++|+ -=|+....+.+.++++. +|.+++.++-.|
T Consensus 201 ~~~~a~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~~-----~iPI~-~de~i~~~~~~~~~i~~~~~d~v~ik~~~~G 272 (379)
T 2rdx_A 201 RVDNAIRLARATRDLDY-ILEQPCR-SYEECQQVRRVA-----DQPMK-LDECVTGLHMAQRIVADRGAEICCLKISNLG 272 (379)
T ss_dssp CHHHHHHHHHHTTTSCC-EEECCSS-SHHHHHHHHTTC-----CSCEE-ECTTCCSHHHHHHHHHHTCCSEEEEETTTTT
T ss_pred CHHHHHHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhhC-----CCCEE-EeCCcCCHHHHHHHHHcCCCCEEEEeccccC
Confidence 33443333244445788 8877765 444454444332 35544 46777777788888764 799999765543
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEEh
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVTA 175 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~a 175 (388)
- + .--.+++..|+++|.++.+.
T Consensus 273 G---i----t~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 273 G---L----SKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp S---H----HHHHHHHHHHHHTTCCEEEE
T ss_pred C---H----HHHHHHHHHHHHcCCeEEEe
Confidence 2 1 22356888899999998875
No 474
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.74 E-value=1.1e+02 Score=28.66 Aligned_cols=84 Identities=19% Similarity=0.269 Sum_probs=53.9
Q ss_pred hHhhHHHHHhh---cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCC-CCChHHHHHHHHH
Q 016513 124 GVVNFDDILRE---TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSP-RPTRAEATDVANA 199 (388)
Q Consensus 124 av~nldeI~~~---~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~-~ptraEv~dv~~a 199 (388)
...+++++++. .|.++|+ .| +.....++.+|-++||+|++ +.| ..+.+|...+..+
T Consensus 68 ~~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~ 127 (330)
T 4ew6_A 68 SYTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFL---------EKPPGATLSEVADLEAL 127 (330)
T ss_dssp EESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHH
T ss_pred ccCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEE---------eCCCCCCHHHHHHHHHH
Confidence 34678888876 6899986 33 23446778889999999996 555 5678888777765
Q ss_pred HHc-CCceeEeccccCCCCCHHHHHHHHHHHHHH
Q 016513 200 VLD-GTDCVMLSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 200 v~~-g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
... |. .+|. +.... -+| .++.+++++.+
T Consensus 128 a~~~g~-~~~v-~~~~r-~~p--~~~~~k~~i~~ 156 (330)
T 4ew6_A 128 ANKQGA-SLFA-SWHSR-YAP--AVEAAKAFLAS 156 (330)
T ss_dssp HHHHTC-CEEE-CCGGG-GST--THHHHHHHHHS
T ss_pred HHhcCC-eEEE-Eehhh-ccH--HHHHHHHHHhc
Confidence 543 43 2233 22221 233 56667777654
No 475
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=25.71 E-value=4.2e+02 Score=24.82 Aligned_cols=139 Identities=16% Similarity=0.159 Sum_probs=80.9
Q ss_pred hCHHHHHhccccCCCCEEEeC-------CCCChhhHHHHHHHHccCCCCceEEEeecCHHh------------HhhHHHH
Q 016513 71 KDKEDILRWGVPNNIDMIALS-------FVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEG------------VVNFDDI 131 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~s-------fV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~a------------v~nldeI 131 (388)
.+.+++ ..|.+.|+|-|=+- -.-|..-++.+++.. ++.+.++|.-..| .+.++..
T Consensus 47 ~s~~~a-~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-----~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~ 120 (287)
T 3iwp_A 47 DSVESA-VNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-----QIPVFVMIRPRGGDFLYSDREIEVMKADIRLA 120 (287)
T ss_dssp SSHHHH-HHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-----CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHH
T ss_pred CCHHHH-HHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-----CCCeEEEEecCCCCcccCHHHHHHHHHHHHHH
Confidence 356777 78888999988654 122566777776643 4889999987666 3456666
Q ss_pred Hhh-cCceeecC--CcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeE
Q 016513 132 LRE-TDSFMVAR--GDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVM 208 (388)
Q Consensus 132 ~~~-~Dgi~igr--gDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~ 208 (388)
.++ +|||.+|- .|= ++..+.+ ++++..|. +.++-+.- =++. .++..+. +...+..|+|-|+
T Consensus 121 ~~~GAdGvVfG~L~~dg--~iD~~~~----~~Li~~a~--~l~vTFHR-AFD~-----~~d~~~A--le~Li~lGvdrIL 184 (287)
T 3iwp_A 121 KLYGADGLVFGALTEDG--HIDKELC----MSLMAICR--PLPVTFHR-AFDM-----VHDPMAA--LETLLTLGFERVL 184 (287)
T ss_dssp HHTTCSEEEECCBCTTS--CBCHHHH----HHHHHHHT--TSCEEECG-GGGG-----CSCHHHH--HHHHHHHTCSEEE
T ss_pred HHcCCCEEEEeeeCCCC--CcCHHHH----HHHHHHcC--CCcEEEEC-chhc-----cCCHHHH--HHHHHHcCCCEEE
Confidence 655 89999984 232 2333322 33455543 45554421 1111 1122222 2233334999999
Q ss_pred eccccCCCCCHHHHHHHHHHHHHHHh
Q 016513 209 LSGESAAGAYPEIAVKIMRRICIEAE 234 (388)
Q Consensus 209 Ls~eta~G~~P~~~v~~~~~i~~~aE 234 (388)
.|+--.. ..+-+..+++++..+.
T Consensus 185 TSG~~~~---a~~Gl~~Lk~Lv~~a~ 207 (287)
T 3iwp_A 185 TSGCDSS---ALEGLPLIKRLIEQAK 207 (287)
T ss_dssp ECTTSSS---TTTTHHHHHHHHHHHT
T ss_pred CCCCCCC---hHHhHHHHHHHHHHhC
Confidence 9885322 2466777777776554
No 476
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=25.65 E-value=1.2e+02 Score=28.80 Aligned_cols=115 Identities=14% Similarity=0.137 Sum_probs=66.3
Q ss_pred HHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchH
Q 016513 161 MIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYR 240 (388)
Q Consensus 161 ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~ 240 (388)
+..+|+..|.|+.+. .|..+....+...-..|++.+...... ....+.........+.+..++..
T Consensus 102 lA~~aa~~G~~~~Iv-----------mP~~~~~~k~~~~~~~GA~Vv~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 166 (344)
T 3vc3_A 102 MAFMAAMKGYKMVLT-----------MPSYTSLERRVTMRAFGAELILTDPAK----GMGGTVKKAYELLENTPNAHMLQ 166 (344)
T ss_dssp HHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG----HHHHHHHHHHHHHHHSTTEECCC
T ss_pred HHHHHHHcCCcEEEE-----------ECCCChHHHHHHHHHcCCEEEEECCCC----cchHHHHHHHHHHhhccCceecc
Confidence 556789999999763 244444456677778899987653221 11222222222222211111111
Q ss_pred HHHHHHHhcCCCCCCchhHH---HHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----hCCCCcEEEE
Q 016513 241 AVFKEMIRSTPLPMSPLESL---ASSAVRTANKA--RAKLIVVLTRGGTTAKLVAK----YRPAVPILSV 301 (388)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~i---a~aAv~~A~~l--~A~aIvv~T~sG~tA~~vSk----~RP~~pIiav 301 (388)
+ ..++...+ ...+.++.+++ ..+++|+..-+|.+..-+++ .+|++.|+++
T Consensus 167 ~-----------~~np~~~~a~~~t~g~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigV 225 (344)
T 3vc3_A 167 Q-----------FSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGV 225 (344)
T ss_dssp T-----------TTCHHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred c-----------cccchhHHHHHHHHHHHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEE
Confidence 0 01222222 23456777777 57899999999988765544 4899999999
No 477
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=25.63 E-value=89 Score=29.63 Aligned_cols=19 Identities=5% Similarity=-0.046 Sum_probs=15.6
Q ss_pred CHHHHHhccccCCCCEEEeC
Q 016513 72 DKEDILRWGVPNNIDMIALS 91 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~s 91 (388)
+.+++ +.+.+.|+|+|.++
T Consensus 191 ~~~~a-~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 191 SKASA-GKLYEAGAAAVDIG 209 (349)
T ss_dssp CHHHH-HHHHHHTCSEEEEE
T ss_pred CHHHH-HHHHHcCCCEEEEc
Confidence 35666 77889999999997
No 478
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=25.49 E-value=3.1e+02 Score=25.98 Aligned_cols=146 Identities=13% Similarity=0.187 Sum_probs=81.0
Q ss_pred CCCChhCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCC-----------------------------CCceEE
Q 016513 66 PTLTEKDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHA-----------------------------KNIQLM 116 (388)
Q Consensus 66 ~~lt~~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~-----------------------------~~~~Ii 116 (388)
|.++..+..++++.|.+.|.- |..-.|.+.+.++.+.+...+.+ ..+++.
T Consensus 8 ~~~~~n~~~~ll~~A~~~~yA-V~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVa 86 (306)
T 3pm6_A 8 PSLKSNRALPLLTFARTHSFA-IPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPIT 86 (306)
T ss_dssp --CTTCSSHHHHHHHHHTTCC-EEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEE
T ss_pred CCCCccHHHHHHHHHHHCCcE-EEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEE
Confidence 445555555554666665543 55556667777776666543321 234454
Q ss_pred EeecCHHhHhhHHHHHhh---------cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHH---HHhhc
Q 016513 117 SKVENQEGVVNFDDILRE---------TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQML---ESMIK 184 (388)
Q Consensus 117 akIEt~~av~nldeI~~~---------~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~l---esM~~ 184 (388)
-........+.+..-++. ..-+|+. .| ++|+++=...-+++++.|++.|..|=.=-..+ |.=+.
T Consensus 87 LHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiD---gS-~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~ 162 (306)
T 3pm6_A 87 LHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVD---MS-HFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQ 162 (306)
T ss_dssp EEEEEECCHHHHHHHHHTC------CCCSEEEEC---CT-TSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBC
T ss_pred EEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEe---CC-CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcc
Confidence 444444333333333332 3446663 22 45788878888999999999988762100000 10000
Q ss_pred C------CCCChHHHHHHHHHHHcCCceeEeccccCCCCCH
Q 016513 185 S------PRPTRAEATDVANAVLDGTDCVMLSGESAAGAYP 219 (388)
Q Consensus 185 ~------~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P 219 (388)
+ ..-+.. ++..++.-|+|++-.+-=|+-|.|+
T Consensus 163 ~~~~~~~~yT~Pe---ea~~Fv~TgvD~LAvaiGt~HG~Yk 200 (306)
T 3pm6_A 163 DTVDLEGVLTTPE---ESEEFVATGINWLAPAFGNVHGNYG 200 (306)
T ss_dssp CCTTCCCBCCCHH---HHHHHHTTTCSEECCCSSCCSSCCC
T ss_pred ccccccccCCCHH---HHHHHHHcCCCEEEEEcCccccCcC
Confidence 0 112223 3355667899999999999999995
No 479
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=25.38 E-value=1e+02 Score=29.20 Aligned_cols=86 Identities=12% Similarity=0.096 Sum_probs=54.6
Q ss_pred hHhhHHHHHhh--cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCC-CCChHHHHHHHHHH
Q 016513 124 GVVNFDDILRE--TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSP-RPTRAEATDVANAV 200 (388)
Q Consensus 124 av~nldeI~~~--~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~-~ptraEv~dv~~av 200 (388)
...+++++++- .|+++|+ .|. .....++.+|-++||+|++ +.| ..+.+|...+..+.
T Consensus 76 ~~~~~~~ll~~~~vD~V~I~-------tp~----~~H~~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a 135 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVSA-------AVS----SERAELAIRAMQHGKDVLV---------DKPGMTSFDQLAKLRRVQ 135 (361)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------CCH----HHHHHHHHHHHHTTCEEEE---------ESCSCSSHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEe-------CCh----HHHHHHHHHHHHCCCeEEE---------eCCCCCCHHHHHHHHHHH
Confidence 35688898875 6999985 232 2345677889999999997 666 57888888887766
Q ss_pred HcCCceeEeccccCCCCCHHHHHHHHHHHHHH
Q 016513 201 LDGTDCVMLSGESAAGAYPEIAVKIMRRICIE 232 (388)
Q Consensus 201 ~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~ 232 (388)
..- ...+.-+..-...+| .++.+++++.+
T Consensus 136 ~~~-g~~l~v~~~~R~~~p--~~~~~k~~i~~ 164 (361)
T 3u3x_A 136 AET-GRIFSILYSEHFESP--ATVKAGELVAA 164 (361)
T ss_dssp HTT-CCCEEEECHHHHTCH--HHHHHHHHHHT
T ss_pred HHc-CCEEEEechHhhCCH--HHHHHHHHHHc
Confidence 542 222222221111124 56677777754
No 480
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=25.27 E-value=3.5e+02 Score=24.39 Aligned_cols=86 Identities=9% Similarity=0.022 Sum_probs=53.4
Q ss_pred HHHHHhccccCCCCEEEeCCC--CChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCCCC
Q 016513 73 KEDILRWGVPNNIDMIALSFV--RKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGMEIP 150 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sfV--~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e~~ 150 (388)
.+.+ +...+.|+|.|.+-.- -+.+++.++.+.+++ .+++++-+.=....+ ..-+||+++- ||-.+-.
T Consensus 23 ~~~~-~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~--~~~Pivl~~y~~n~i------~~gvDg~iip--dLp~ee~ 91 (234)
T 2f6u_A 23 DEII-KAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ--YGLPIVVEPSDPSNV------VYDVDYLFVP--TVLNSAD 91 (234)
T ss_dssp HHHH-HHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT--SCCCEEECCSSCCCC------CCCSSEEEEE--EETTBSB
T ss_pred HHHH-HHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC--CCCCEEEecCCcchh------hcCCCEEEEc--ccCCCCC
Confidence 3445 6778899999998653 346777777777765 456666544332122 3347999994 5544443
Q ss_pred hhhHHHHHHHHH----HHHHHcC
Q 016513 151 VEKIFLAQKMMI----YKCNLVG 169 (388)
Q Consensus 151 ~~~v~~~qk~ii----~~c~~~g 169 (388)
.+-+-.+|+... ++|+++|
T Consensus 92 ~~~~~g~~~~~~~~~~~~~~~~g 114 (234)
T 2f6u_A 92 GDWITGKHAQWVRMHYENLQKFT 114 (234)
T ss_dssp GGGTTHHHHHHHHTTGGGHHHHH
T ss_pred HHHHhhhHHHHHHhhhhhHHHcC
Confidence 333435566665 5668888
No 481
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=25.25 E-value=1e+02 Score=28.15 Aligned_cols=64 Identities=6% Similarity=-0.018 Sum_probs=34.1
Q ss_pred HHHHHhccccCCCCEEEeCC--------CCChhhHHHHHHHHccCCCCceEEEe--ecCHHhHhhHHHHHhh-cCceeec
Q 016513 73 KEDILRWGVPNNIDMIALSF--------VRKGSDLVNVRKVLGPHAKNIQLMSK--VENQEGVVNFDDILRE-TDSFMVA 141 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sf--------V~sa~dv~~v~~~l~~~~~~~~Iiak--IEt~~av~nldeI~~~-~Dgi~ig 141 (388)
.+.+ +.+.+.|+|+|...- ..+.+.++.+++. .++++++- |-|+ +++.++++. +||+++|
T Consensus 137 ~~~a-~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~-----~~iPviv~gGI~t~---eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 137 VVLA-RKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQ-----AKVPVIVDAGIGSP---KDAAYAMELGADGVLLN 207 (264)
T ss_dssp HHHH-HHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHH-----CSSCBEEESCCCSH---HHHHHHHHTTCSEEEES
T ss_pred HHHH-HHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhc-----CCCCEEEEeCCCCH---HHHHHHHHcCCCEEEEc
Confidence 3445 556667777773301 1234455555542 13455553 5444 345555555 7888888
Q ss_pred CCcc
Q 016513 142 RGDL 145 (388)
Q Consensus 142 rgDL 145 (388)
.+=.
T Consensus 208 SAi~ 211 (264)
T 1xm3_A 208 TAVS 211 (264)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7533
No 482
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=25.25 E-value=1.4e+02 Score=26.36 Aligned_cols=78 Identities=9% Similarity=0.126 Sum_probs=0.0
Q ss_pred eEEEeecCHHhHhhHHHHHhh-cCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHH
Q 016513 114 QLMSKVENQEGVVNFDDILRE-TDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAE 192 (388)
Q Consensus 114 ~IiakIEt~~av~nldeI~~~-~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraE 192 (388)
+|||-| ...++++..++. ++.+|+.-||+ .-.+.++++++++||++++.-.+. ..-.+.+.-
T Consensus 11 piI~Av---r~~~~l~~al~s~~~~ifll~g~i----------~~l~~~v~~lk~~~K~v~Vh~Dli----~Gls~d~~a 73 (192)
T 3kts_A 11 SIIPAA---HNQKDMEKILELDLTYMVMLETHV----------AQLKALVKYAQAGGKKVLLHADLV----NGLKNDDYA 73 (192)
T ss_dssp CEEEEE---SSSHHHHHHTTSSCCEEEECSEET----------TTHHHHHHHHHHTTCEEEEEGGGE----ETCCCSHHH
T ss_pred CEEEEe---cCHHHHHHHHcCCCCEEEEecCcH----------HHHHHHHHHHHHcCCeEEEecCch----hccCCcHHH
Q ss_pred HHHHHHHHHcCCceeEec
Q 016513 193 ATDVANAVLDGTDCVMLS 210 (388)
Q Consensus 193 v~dv~~av~~g~d~i~Ls 210 (388)
+.-+.+ ..++|+++-+
T Consensus 74 i~fL~~--~~~pdGIIsT 89 (192)
T 3kts_A 74 IDFLCT--EICPDGIIST 89 (192)
T ss_dssp HHHHHH--TTCCSEEEES
T ss_pred HHHHHh--CCCCCEEEeC
No 483
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=25.24 E-value=53 Score=31.12 Aligned_cols=48 Identities=8% Similarity=0.136 Sum_probs=41.6
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV 119 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI 119 (388)
.|...+ +.=+++|+|+++--++=+++....+++.+.+.|-+++|++=|
T Consensus 164 ~d~~~L-k~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GI 211 (304)
T 3fst_A 164 ADLLNL-KRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGI 211 (304)
T ss_dssp HHHHHH-HHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEE
T ss_pred HHHHHH-HHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 466777 777889999999999999999999999998888788888765
No 484
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=25.15 E-value=98 Score=30.02 Aligned_cols=19 Identities=26% Similarity=0.254 Sum_probs=16.7
Q ss_pred HHHHHHHHHcCCceeEecc
Q 016513 193 ATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 193 v~dv~~av~~g~d~i~Ls~ 211 (388)
-.|+..++..|||++|+..
T Consensus 279 ~~d~~kal~lGA~~v~ig~ 297 (368)
T 3vkj_A 279 GLDAAKAIALGADIAGMAL 297 (368)
T ss_dssp HHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcH
Confidence 3688999999999999974
No 485
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=25.06 E-value=55 Score=31.11 Aligned_cols=67 Identities=18% Similarity=0.183 Sum_probs=42.6
Q ss_pred hccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCce-EEEeecCHHh--------HhhHHHHHhh-cCceeecCCcccC
Q 016513 78 RWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQ-LMSKVENQEG--------VVNFDDILRE-TDSFMVARGDLGM 147 (388)
Q Consensus 78 ~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~-IiakIEt~~a--------v~nldeI~~~-~Dgi~igrgDLg~ 147 (388)
+.+.+.|+|+|++ ++.++..+|+.++ .+.. +.+=|= ++| +.++.+.++. +|.+++||+=+..
T Consensus 165 ~~a~~~G~dGvV~----s~~E~~~IR~~~~---~~fl~VTPGIr-~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I~~a 236 (303)
T 3ru6_A 165 KISYENGLDGMVC----SVFESKKIKEHTS---SNFLTLTPGIR-PFGETNDDQKRVANLAMARENLSDYIVVGRPIYKN 236 (303)
T ss_dssp HHHHHTTCSEEEC----CTTTHHHHHHHSC---TTSEEEECCCC-TTC--------CCSHHHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHcCCCEEEE----CHHHHHHHHHhCC---CccEEECCCcC-cccCCcccccccCCHHHHHHcCCCEEEEChHHhCC
Confidence 3556789999876 5667888887764 2333 334442 222 3367666665 8999999887766
Q ss_pred CCChh
Q 016513 148 EIPVE 152 (388)
Q Consensus 148 e~~~~ 152 (388)
+=|.+
T Consensus 237 ~dp~~ 241 (303)
T 3ru6_A 237 ENPRA 241 (303)
T ss_dssp SCHHH
T ss_pred CCHHH
Confidence 54443
No 486
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=25.02 E-value=2.4e+02 Score=25.96 Aligned_cols=21 Identities=10% Similarity=-0.164 Sum_probs=11.9
Q ss_pred HHHHHHHcCCCCCCCEEEEEeec
Q 016513 354 ALKSAIEKGLCSPGDAVVALHRI 376 (388)
Q Consensus 354 a~~~~~~~g~~~~GD~vVvv~g~ 376 (388)
+.+.....+. .-|.||+-.|.
T Consensus 155 ~~Ei~~q~~~--~~d~vvvpvG~ 175 (303)
T 2v03_A 155 GPEIWQQTGG--RITHFVSSMGT 175 (303)
T ss_dssp HHHHHHHTTT--CCCEEEEECSS
T ss_pred HHHHHHHhCC--CCCEEEEEeCc
Confidence 3444444332 35888887776
No 487
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=25.02 E-value=2.2e+02 Score=26.83 Aligned_cols=107 Identities=10% Similarity=0.099 Sum_probs=70.9
Q ss_pred CCCCEEEeCCCCC--------------hhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhhcCceeecCCcccCC
Q 016513 83 NNIDMIALSFVRK--------------GSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRETDSFMVARGDLGME 148 (388)
Q Consensus 83 ~g~d~v~~sfV~s--------------a~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~~Dgi~igrgDLg~e 148 (388)
.+..+|+-+..+. .+-++.++++..+. .+.+++-+-.++.++-+ .+.+|.+-||.+++-
T Consensus 71 ~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--GLpv~Tev~D~~~v~~l---~~~vd~lkIgA~~~~-- 143 (298)
T 3fs2_A 71 LGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEY--GFPVLTDIHTEEQCAAV---APVVDVLQIPAFLCR-- 143 (298)
T ss_dssp HTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHH--CCCEEEECCSHHHHHHH---TTTCSEEEECGGGTT--
T ss_pred cCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHH---HhhCCEEEECccccC--
Confidence 4678888764442 35677777777654 47788877777666554 445899999866542
Q ss_pred CChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc-CCceeEecccc
Q 016513 149 IPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLSGES 213 (388)
Q Consensus 149 ~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~-g~d~i~Ls~et 213 (388)
..+ +++++.+.||||++.|.|. -|..|+...+..+.. |.+=++|..=+
T Consensus 144 ----n~~-----LLr~va~~gkPVilK~Gms--------~t~~ei~~ave~i~~~Gn~~iiL~erg 192 (298)
T 3fs2_A 144 ----QTD-----LLIAAARTGRVVNVKKGQF--------LAPWDMKNVLAKITESGNPNVLATERG 192 (298)
T ss_dssp ----CHH-----HHHHHHHTTSEEEEECCTT--------CCGGGHHHHHHHHHTTTCCCEEEEECC
T ss_pred ----CHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 222 3445557899999866542 366778777776654 77777775433
No 488
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=24.95 E-value=4.9e+02 Score=25.85 Aligned_cols=111 Identities=13% Similarity=0.016 Sum_probs=72.7
Q ss_pred CHHHHHhccccCCCCEEEe-----CCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHhh-cCceeecCCcc
Q 016513 72 DKEDILRWGVPNNIDMIAL-----SFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILRE-TDSFMVARGDL 145 (388)
Q Consensus 72 D~~di~~~~l~~g~d~v~~-----sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~~-~Dgi~igrgDL 145 (388)
|...+ ..+.+.|+.+|-+ -|-.+.+|++++|+.. +++|+.|==-.... .+.+.... +|+|++--.-|
T Consensus 69 ~~~~i-A~~y~~~A~~IsvLTd~~~F~gs~~dL~~vr~~v-----~lPvLrKDFI~d~~-Qi~ea~~~GAD~ILLi~a~l 141 (452)
T 1pii_A 69 DPARI-AAIYKHYASAISVLTDEKYFQGSFNFLPIVSQIA-----PQPILCKDFIIDPY-QIYLARYYQADACLLMLSVL 141 (452)
T ss_dssp CHHHH-HHHHTTTCSEEEEECCSTTTCCCTTHHHHHHHHC-----CSCEEEESCCCSHH-HHHHHHHTTCSEEEEETTTC
T ss_pred CHHHH-HHHHHhhCcEEEEEecccccCCCHHHHHHHHHhc-----CCCeEEEeccCCHH-HHHHHHHcCCCEEEEEcccC
Confidence 66777 5566666999988 6778999999999876 35677663112233 24553333 79887754433
Q ss_pred cCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecc
Q 016513 146 GMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSG 211 (388)
Q Consensus 146 g~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~ 211 (388)
. . .--+.+++.|++.|..+++-.+ |. .++..|...|+|.|-.+.
T Consensus 142 ~----~----~~l~~l~~~a~~lgm~~LvEvh-----------~~---eE~~~A~~lga~iIGinn 185 (452)
T 1pii_A 142 D----D----DQYRQLAAVAHSLEMGVLTEVS-----------NE---EEQERAIALGAKVVGINN 185 (452)
T ss_dssp C----H----HHHHHHHHHHHHTTCEEEEEEC-----------SH---HHHHHHHHTTCSEEEEES
T ss_pred C----H----HHHHHHHHHHHHcCCeEEEEeC-----------CH---HHHHHHHHCCCCEEEEeC
Confidence 2 1 3346788889999999887322 22 344567778888776654
No 489
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=24.81 E-value=1.8e+02 Score=25.72 Aligned_cols=31 Identities=13% Similarity=0.090 Sum_probs=20.2
Q ss_pred hcCceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhh
Q 016513 134 ETDSFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTAT 176 (388)
Q Consensus 134 ~~Dgi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~at 176 (388)
-.|||++.+.+.. . ..++.+++.|+|+++..
T Consensus 66 ~vdgiIi~~~~~~----~--------~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 66 SADGVIISKIEPN----D--------PRVRFMTERNMPFVTHG 96 (288)
T ss_dssp CCSEEEEESCCTT----C--------HHHHHHHHTTCCEEEES
T ss_pred CccEEEEecCCCC----c--------HHHHHHhhCCCCEEEEC
Confidence 3799999754421 1 23556778899988643
No 490
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=24.68 E-value=44 Score=31.68 Aligned_cols=62 Identities=6% Similarity=0.068 Sum_probs=48.4
Q ss_pred hCHHHHHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCceEEEeecCHHhHhhHHHHHh
Q 016513 71 KDKEDILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVNFDDILR 133 (388)
Q Consensus 71 ~D~~di~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~nldeI~~ 133 (388)
.|.+.+ +.=+++|+|+++--++=+.+....+++.+.+.|-++.|++=|==.....++.-+.+
T Consensus 161 ~d~~~L-k~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~ 222 (310)
T 3apt_A 161 ADLRHF-KAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTE 222 (310)
T ss_dssp HHHHHH-HHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHH
T ss_pred HHHHHH-HHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHH
Confidence 466777 77788999999999999999999999999888888888887744444445544433
No 491
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=24.67 E-value=1.8e+02 Score=27.08 Aligned_cols=126 Identities=11% Similarity=0.080 Sum_probs=63.9
Q ss_pred HHHHHHHHcCCCEEEhhhHHHHhhcCCCCC---hHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcc
Q 016513 160 MMIYKCNLVGKPVVTATQMLESMIKSPRPT---RAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESS 236 (388)
Q Consensus 160 ~ii~~c~~~gkpvi~atq~lesM~~~~~pt---raEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~ 236 (388)
.+..+|+..|.++.+. |-.+..+. ...-..+...-..|++.+...++.... ++..+.+...++.++-...
T Consensus 83 alA~~a~~~G~~~~iv------~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~ 155 (338)
T 1tzj_A 83 QVAAVAAHLGMKCVLV------QENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIG-FRRSWEDALESVRAAGGKP 155 (338)
T ss_dssp HHHHHHHHHTCEEEEE------EECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC--------CHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCceEEE------ecCCCCccccccccCccHHHHHhCCCEEEEeCCcchhh-HHHHHHHHHHHHHhcCCce
Confidence 3455689999998763 11221111 000123455556799977754332110 1111233334433321111
Q ss_pred cchHHH-HHHHHhcCCCCCCchhHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHhh-----CCCCcEEEE
Q 016513 237 LDYRAV-FKEMIRSTPLPMSPLESLASSAVRTANKA-----RAKLIVVLTRGGTTAKLVAKY-----RPAVPILSV 301 (388)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~ia~aAv~~A~~l-----~A~aIvv~T~sG~tA~~vSk~-----RP~~pIiav 301 (388)
+.+..- | .. +. ..+.....+.++.+++ ..+.|++.+-+|.|+.-++++ .|. .|+++
T Consensus 156 ~~~p~~~~-----~n--~~-~~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigv 222 (338)
T 1tzj_A 156 YAIPAGCS-----DH--PL-GGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGV 222 (338)
T ss_dssp EECCGGGT-----SS--TT-TTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEE
T ss_pred EEeCCCcC-----CC--cc-cHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEE
Confidence 211100 1 11 11 1123345566777665 479999999999998877754 688 99999
No 492
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=24.67 E-value=69 Score=29.46 Aligned_cols=67 Identities=12% Similarity=0.194 Sum_probs=37.4
Q ss_pred hCHHHHHhccccC-CCCEEEeCCCC---ChhhHHHHHHHHccCCCCceEEEeecCHHhHhh---HHHHHhhcCceeecC
Q 016513 71 KDKEDILRWGVPN-NIDMIALSFVR---KGSDLVNVRKVLGPHAKNIQLMSKVENQEGVVN---FDDILRETDSFMVAR 142 (388)
Q Consensus 71 ~D~~di~~~~l~~-g~d~v~~sfV~---sa~dv~~v~~~l~~~~~~~~IiakIEt~~av~n---ldeI~~~~Dgi~igr 142 (388)
++.+++ +.+++. |+|+|.+..-+ ..-|+....+++.....+..+|+ |+ |+.. +....+.+||++||.
T Consensus 158 ~~~eE~-~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~ip~~~~vIa--Es--GI~t~edv~~~~~~a~avLVG~ 231 (251)
T 1i4n_A 158 HSREDL-EKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVA--ES--GIKDPRELKDLRGKVNAVLVGT 231 (251)
T ss_dssp CSHHHH-HHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEE--ES--CCCCGGGHHHHTTTCSEEEECH
T ss_pred CCHHHH-HHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHhCCCCCEEEE--eC--CCCCHHHHHHHHHhCCEEEEcH
Confidence 356667 788888 88888776421 12234455555544444455555 33 3333 333333378888874
No 493
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=24.45 E-value=2.5e+02 Score=23.64 Aligned_cols=124 Identities=9% Similarity=0.104 Sum_probs=63.9
Q ss_pred HHHHHhccccCCCCEEEeCC--CCChhhHHHHHHHHccCCCCceEEEeecC-------------------HHhHhhHHHH
Q 016513 73 KEDILRWGVPNNIDMIALSF--VRKGSDLVNVRKVLGPHAKNIQLMSKVEN-------------------QEGVVNFDDI 131 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~sf--V~sa~dv~~v~~~l~~~~~~~~IiakIEt-------------------~~av~nldeI 131 (388)
..++ ..+++.|++.++..- ++..+-+..+.+.++.. .++..++. ....+.+..+
T Consensus 65 ~~~~-~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~~----~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~ 139 (237)
T 3cwo_X 65 QAMV-IEAIKAGAKDFIVNTAAVENPSLITQIAQTFGSQ----AVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV 139 (237)
T ss_dssp HHHH-HHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTGG----GEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHH
T ss_pred HHHH-HHHHHCCHHheEeCCcccChHHHHHHHHHHhCCC----ceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHH
Confidence 5566 788899999887653 45666666777666432 11111111 1223334444
Q ss_pred Hhhc-C-ceeecCCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEe
Q 016513 132 LRET-D-SFMVARGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVML 209 (388)
Q Consensus 132 ~~~~-D-gi~igrgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~L 209 (388)
.... . .++.+.+.-|.--+.. . +.|-+.+....+|++..+- .- ...|...+...|+|+++.
T Consensus 140 ~~~~~~~vli~~~~~~g~~~g~~--~---~~i~~~~~~~~~Pvia~~g---------~~---~~~~~~~~~~~G~~~~~v 202 (237)
T 3cwo_X 140 EKRGAGEILLTSIDRDGTKSGYD--T---EMIRFVRPLTTLPIIASGG---------AG---KMEHFLEAFLAGADAALA 202 (237)
T ss_dssp HHHTCSEEEEEETTTTTCCSCCC--H---HHHHHHGGGCCSCEEEESC---------CC---SHHHHHHHHHHTCSEEEE
T ss_pred hhcCCCeEEEEecCCCCcccccc--H---HHHHHHHHhcCCCEEecCC---------CC---CHHHHHHHHHcCcHHHhh
Confidence 4432 2 3334443333333332 1 2222334456899987442 22 234556666789999987
Q ss_pred ccccCCCCC
Q 016513 210 SGESAAGAY 218 (388)
Q Consensus 210 s~eta~G~~ 218 (388)
..--..|.+
T Consensus 203 g~a~~~~~~ 211 (237)
T 3cwo_X 203 ASVFHFREI 211 (237)
T ss_dssp SHHHHTTSS
T ss_pred hHHHHcCCC
Confidence 643333443
No 494
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=24.31 E-value=2.2e+02 Score=26.10 Aligned_cols=89 Identities=6% Similarity=-0.048 Sum_probs=57.8
Q ss_pred HhccccCCCCEEEeC------CCCChhhHHHHHHHHccCCCCceEEEeec---CHHhHhhHHHHHhh-cCceeecCCccc
Q 016513 77 LRWGVPNNIDMIALS------FVRKGSDLVNVRKVLGPHAKNIQLMSKVE---NQEGVVNFDDILRE-TDSFMVARGDLG 146 (388)
Q Consensus 77 ~~~~l~~g~d~v~~s------fV~sa~dv~~v~~~l~~~~~~~~IiakIE---t~~av~nldeI~~~-~Dgi~igrgDLg 146 (388)
+++.++. +|++++. +.-|.++=+++.+...+ ++.+|+-+= |.++++....--+. +||+++-+-.+.
T Consensus 25 v~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 100 (283)
T 2pcq_A 25 AQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYY 100 (283)
T ss_dssp HHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTT
T ss_pred HHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCC
Confidence 3788888 9998763 44566666666665544 778888884 46677666666554 799998755442
Q ss_pred CCCChhhHHHHHHHHHHHHHHcCCCEEE
Q 016513 147 MEIPVEKIFLAQKMMIYKCNLVGKPVVT 174 (388)
Q Consensus 147 ~e~~~~~v~~~qk~ii~~c~~~gkpvi~ 174 (388)
--.+.+.+...-+.|.+ +.|+++
T Consensus 101 ~~~~~~~l~~~f~~va~-----~lPiil 123 (283)
T 2pcq_A 101 HGSLGAGLLRYYEALAE-----KMPLFL 123 (283)
T ss_dssp GGGTTTHHHHHHHHHHH-----HSCEEE
T ss_pred CCCCHHHHHHHHHHHhc-----CCCEEE
Confidence 21033556666666654 688876
No 495
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=24.27 E-value=1.8e+02 Score=27.58 Aligned_cols=102 Identities=18% Similarity=0.129 Sum_probs=49.2
Q ss_pred hhcCCCCChHHHHHHHHHHHcCCceeEeccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHhcCCCCCCchhHHH
Q 016513 182 MIKSPRPTRAEATDVANAVLDGTDCVMLSGESAAGAYPEIAVKIMRRICIEAESSLDYRAVFKEMIRSTPLPMSPLESLA 261 (388)
Q Consensus 182 M~~~~~ptraEv~dv~~av~~g~d~i~Ls~eta~G~~P~~~v~~~~~i~~~aE~~~~~~~~~~~~~~~~~~~~~~~~~ia 261 (388)
|..+..+|.+++.+.++-+.+. +|.=|+.-...+.+ ..-..++.+.. ..+|. -+--+..+
T Consensus 1 ~~~~~~~~~~~i~~a~~~i~~~-----------i~~TPL~~~~~l~~---~~g~~i~~K~E-----~~~pt-GSfK~Rga 60 (346)
T 3l6b_A 1 MDAQYDISFADVEKAHINIRDS-----------IHLTPVLTSSILNQ---LTGRNLFFKCE-----LFQKT-GSFKIRGA 60 (346)
T ss_dssp --CCCSSCHHHHHHHHHHHGGG-----------SCCCCEECCHHHHH---HHTSEEEEEEG-----GGSGG-GBTHHHHH
T ss_pred CCcccCCCHHHHHHHHHHHhcc-----------cCCCCeEEchhhHH---HhCCeEEEEeC-----CCCCC-CCcHHHHH
Confidence 3445678888888888777643 33335433333332 22223332211 11110 11123344
Q ss_pred HHHHHHHHh----cCCcEEEEEcCCchHHHHHHhh--CCCCcEEEEEecc
Q 016513 262 SSAVRTANK----ARAKLIVVLTRGGTTAKLVAKY--RPAVPILSVVVPV 305 (388)
Q Consensus 262 ~aAv~~A~~----l~A~aIvv~T~sG~tA~~vSk~--RP~~pIiav~~p~ 305 (388)
...+..+.+ .+.+.|++.| +|.+++-+|.+ +-.+|...+ +|.
T Consensus 61 ~~~i~~a~~~g~~~~~~~vv~~S-sGNhg~a~A~aa~~~G~~~~iv-~p~ 108 (346)
T 3l6b_A 61 LNAVRSLVPDALERKPKAVVTHS-SGNHGQALTYAAKLEGIPAYIV-VPQ 108 (346)
T ss_dssp HHHHHTTC-----CCCSCEEEEC-SSHHHHHHHHHHHHTTCCEEEE-EET
T ss_pred HHHHHHHHHhccccCCCEEEEeC-CCHHHHHHHHHHHHhCCCEEEE-ECC
Confidence 444444433 2566677776 68877755544 346777766 454
No 496
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=24.24 E-value=47 Score=29.92 Aligned_cols=72 Identities=18% Similarity=0.202 Sum_probs=43.1
Q ss_pred HHhccccCCCCEEEeCCCCChhhHHHHHHHHccCCCCce-EEEeecCHHhHhhHHHHHh-hcCceeecCCcccCCCChhh
Q 016513 76 ILRWGVPNNIDMIALSFVRKGSDLVNVRKVLGPHAKNIQ-LMSKVENQEGVVNFDDILR-ETDSFMVARGDLGMEIPVEK 153 (388)
Q Consensus 76 i~~~~l~~g~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~-IiakIEt~~av~nldeI~~-~~Dgi~igrgDLg~e~~~~~ 153 (388)
+++.+.+.|+|++.+|- +.++++..+|+.++. +.. +.+-| .++|- +. +.++ -+|.+.+||+=+..+=|.+.
T Consensus 142 ~a~~a~~~G~~GvV~~a-t~~~e~~~ir~~~~~---~~~iv~PGI-~~~g~-~p-~~~~aGad~iVvGr~I~~a~dp~~a 214 (228)
T 3m47_A 142 IARMGVDLGVKNYVGPS-TRPERLSRLREIIGQ---DSFLISPGV-GAQGG-DP-GETLRFADAIIVGRSIYLADNPAAA 214 (228)
T ss_dssp HHHHHHHTTCCEEECCS-SCHHHHHHHHHHHCS---SSEEEECC------------CGGGTCSEEEECHHHHTSSCHHHH
T ss_pred HHHHHHHhCCcEEEECC-CChHHHHHHHHhcCC---CCEEEecCc-CcCCC-CH-hHHHcCCCEEEECHHHhCCCCHHHH
Confidence 33678889999998886 568889999887742 233 33333 12221 33 3333 37999999987766544333
Q ss_pred H
Q 016513 154 I 154 (388)
Q Consensus 154 v 154 (388)
+
T Consensus 215 ~ 215 (228)
T 3m47_A 215 A 215 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 497
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=24.21 E-value=2.3e+02 Score=21.24 Aligned_cols=63 Identities=14% Similarity=0.206 Sum_probs=36.5
Q ss_pred HHHHHHHhcCCcEEEEEc----CCchHH-HHHHhh--CCCCcEEEEEeccccCCCCCCcCCCcccccccccccccEEEEe
Q 016513 263 SAVRTANKARAKLIVVLT----RGGTTA-KLVAKY--RPAVPILSVVVPVLTTDSFDWTCSDETPARHSLIYRGLIPILA 335 (388)
Q Consensus 263 aAv~~A~~l~A~aIvv~T----~sG~tA-~~vSk~--RP~~pIiav~~p~~~tt~~~w~~~~~~~aR~l~l~~GV~P~l~ 335 (388)
.|.+...+.+.+.|++-- .+|... +.+.+. .|.+||+.+ |. ........-.+-.|+.-++.
T Consensus 37 ~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~-------s~-----~~~~~~~~~~~~~Ga~~~l~ 104 (122)
T 3gl9_A 37 IALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVL-------TA-----KGGEEDESLALSLGARKVMR 104 (122)
T ss_dssp HHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEE-------ES-----CCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEE-------ec-----CCchHHHHHHHhcChhhhcc
Confidence 344455566778776643 355433 334322 378999999 30 23333344456678888888
Q ss_pred CC
Q 016513 336 EG 337 (388)
Q Consensus 336 ~~ 337 (388)
++
T Consensus 105 KP 106 (122)
T 3gl9_A 105 KP 106 (122)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 498
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=24.04 E-value=3.9e+02 Score=24.88 Aligned_cols=91 Identities=13% Similarity=-0.009 Sum_probs=51.7
Q ss_pred cCceeec-CCcccCCCChhhHHHHHHHHHHHHHHcCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHcCCceeEecccc
Q 016513 135 TDSFMVA-RGDLGMEIPVEKIFLAQKMMIYKCNLVGKPVVTATQMLESMIKSPRPTRAEATDVANAVLDGTDCVMLSGES 213 (388)
Q Consensus 135 ~Dgi~ig-rgDLg~e~~~~~v~~~qk~ii~~c~~~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~g~d~i~Ls~et 213 (388)
+||+++. ---=+..+..++-..+.+..++.++ -..|++..+- .-|+.-+.-...|-..|+|++|+..=-
T Consensus 47 v~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~-grvpViaGvg---------~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 47 IDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH-GRALVVAGIG---------YATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp CCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC---------SSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEEeC---------cCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 6898875 1111233444554445555555543 2368876542 223333333444667799999996332
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc
Q 016513 214 AAGAYPEIAVKIMRRICIEAES 235 (388)
Q Consensus 214 a~G~~P~~~v~~~~~i~~~aE~ 235 (388)
-...-+.+.++..+.|+..+.-
T Consensus 117 y~~~s~~~l~~~f~~va~a~~l 138 (316)
T 3e96_A 117 HPYVTAGGVYAYFRDIIEALDF 138 (316)
T ss_dssp CSCCCHHHHHHHHHHHHHHHTS
T ss_pred CCCCCHHHHHHHHHHHHHhCCC
Confidence 2222356778888888888764
No 499
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=23.99 E-value=95 Score=30.35 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=11.4
Q ss_pred HHHHHhccccCCCCEEEeC
Q 016513 73 KEDILRWGVPNNIDMIALS 91 (388)
Q Consensus 73 ~~di~~~~l~~g~d~v~~s 91 (388)
.++. +.+.+.|+|+|.++
T Consensus 263 ~e~A-~~a~~aGad~I~vs 280 (392)
T 2nzl_A 263 GDDA-REAVKHGLNGILVS 280 (392)
T ss_dssp HHHH-HHHHHTTCCEEEEC
T ss_pred HHHH-HHHHHcCCCEEEeC
Confidence 3444 56667777777775
No 500
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=23.95 E-value=3.2e+02 Score=25.15 Aligned_cols=147 Identities=20% Similarity=0.212 Sum_probs=85.7
Q ss_pred CChhCHHHHHhccccCC-CCEEEeCCCCChhhHHHHHHHHccCCCCceEEEee----cCHHhHhhHHHHHhh-----cCc
Q 016513 68 LTEKDKEDILRWGVPNN-IDMIALSFVRKGSDLVNVRKVLGPHAKNIQLMSKV----ENQEGVVNFDDILRE-----TDS 137 (388)
Q Consensus 68 lt~~D~~di~~~~l~~g-~d~v~~sfV~sa~dv~~v~~~l~~~~~~~~IiakI----Et~~av~nldeI~~~-----~Dg 137 (388)
.++.++..+.+.+++.| +|+|=+-.-...+.++++.+...+. +++||+-- .|+. .+.+.++++. +|.
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDI 192 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADI 192 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCE
Confidence 45556666658889999 9999988766666677776655443 35555532 3553 3444444432 465
Q ss_pred eeecCCcccCCCChhhHHHHHHHHHHHHHH-cCCCEEEhhhHHHHhhcCCCCChHHHHHHHHHHHc-CCceeEeccccCC
Q 016513 138 FMVARGDLGMEIPVEKIFLAQKMMIYKCNL-VGKPVVTATQMLESMIKSPRPTRAEATDVANAVLD-GTDCVMLSGESAA 215 (388)
Q Consensus 138 i~igrgDLg~e~~~~~v~~~qk~ii~~c~~-~gkpvi~atq~lesM~~~~~ptraEv~dv~~av~~-g~d~i~Ls~eta~ 215 (388)
+=++. +.-..+++..+.+-.-..... .++|+|.- +|=.....+|. .|.++- =.-.-.+...+|=
T Consensus 193 vKia~----~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SRi-----~~~~~GS~vTf~~l~~~sAP 258 (276)
T 3o1n_A 193 PKIAV----MPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISRL-----AGEVFGSAATFGAVKKASAP 258 (276)
T ss_dssp EEEEE----CCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHHH-----CHHHHTCCEEECBSSCCSST
T ss_pred EEEEe----cCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHHH-----HHHHhCCceEecCCCCCCCC
Confidence 54431 122335666555544333333 67898752 45555555554 776652 2222345678999
Q ss_pred CCCHHHHHHHHHHHHH
Q 016513 216 GAYPEIAVKIMRRICI 231 (388)
Q Consensus 216 G~~P~~~v~~~~~i~~ 231 (388)
|..+++-++.+-+++.
T Consensus 259 GQl~~~~l~~~l~~l~ 274 (276)
T 3o1n_A 259 GAISVADLRTVLTILH 274 (276)
T ss_dssp TCCBHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhc
Confidence 9999877776655554
Done!