Query 016515
Match_columns 388
No_of_seqs 145 out of 1828
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 07:32:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016515.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016515hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0253 Synaptic vesicle trans 100.0 4.9E-51 1.1E-55 356.0 30.3 366 3-379 153-527 (528)
2 KOG0569 Permease of the major 100.0 8.7E-40 1.9E-44 305.4 31.8 346 5-388 105-471 (485)
3 TIGR01299 synapt_SV2 synaptic 100.0 8.2E-40 1.8E-44 324.1 29.8 375 3-379 242-741 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 6.8E-38 1.5E-42 304.8 31.7 351 3-385 96-502 (502)
5 TIGR00898 2A0119 cation transp 100.0 3.4E-35 7.4E-40 286.6 30.6 335 3-382 167-505 (505)
6 KOG0254 Predicted transporter 100.0 1.9E-33 4E-38 273.9 31.4 349 2-386 128-498 (513)
7 PF00083 Sugar_tr: Sugar (and 100.0 2.7E-40 5.9E-45 318.1 -19.0 347 2-385 85-450 (451)
8 KOG0255 Synaptic vesicle trans 100.0 4.5E-33 9.8E-38 272.4 31.4 347 2-387 157-508 (521)
9 PRK10077 xylE D-xylose transpo 100.0 9.3E-30 2E-34 246.8 33.4 332 16-387 120-473 (479)
10 PRK10642 proline/glycine betai 100.0 2.9E-30 6.3E-35 250.5 29.2 321 2-380 96-438 (490)
11 KOG0252 Inorganic phosphate tr 100.0 2.3E-31 5E-36 239.9 11.5 354 2-388 123-514 (538)
12 PRK09952 shikimate transporter 100.0 2.4E-27 5.1E-32 226.9 29.2 309 3-376 104-437 (438)
13 TIGR00879 SP MFS transporter, 100.0 3.5E-27 7.5E-32 228.1 28.8 350 4-381 112-480 (481)
14 PRK10406 alpha-ketoglutarate t 100.0 1.2E-25 2.6E-30 215.0 29.2 304 3-379 103-430 (432)
15 TIGR00903 2A0129 major facilit 99.9 1.3E-24 2.9E-29 202.5 26.5 283 14-370 77-364 (368)
16 PRK12307 putative sialic acid 99.9 1.7E-23 3.7E-28 199.9 28.5 318 3-376 93-414 (426)
17 PRK11551 putative 3-hydroxyphe 99.9 5.9E-23 1.3E-27 194.9 29.2 302 4-370 91-395 (406)
18 PRK15075 citrate-proton sympor 99.9 5.6E-23 1.2E-27 196.7 29.0 280 3-349 96-397 (434)
19 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.5E-22 3.3E-27 192.2 26.8 303 3-348 83-397 (412)
20 TIGR00891 2A0112 putative sial 99.9 2.1E-22 4.5E-27 190.8 26.5 301 3-348 87-392 (405)
21 COG2271 UhpC Sugar phosphate p 99.9 1.9E-23 4.2E-28 188.0 17.4 318 2-370 103-433 (448)
22 TIGR00895 2A0115 benzoate tran 99.9 5.5E-22 1.2E-26 187.3 27.1 303 4-343 93-397 (398)
23 PRK11663 regulatory protein Uh 99.9 4.4E-22 9.5E-27 190.5 24.1 325 3-379 98-432 (434)
24 COG2814 AraJ Arabinose efflux 99.9 3.4E-21 7.3E-26 175.7 26.9 295 3-370 88-385 (394)
25 TIGR00893 2A0114 d-galactonate 99.9 1.8E-21 4E-26 183.2 26.2 317 3-368 69-396 (399)
26 PRK10489 enterobactin exporter 99.9 5.9E-21 1.3E-25 181.9 25.3 307 13-386 107-414 (417)
27 PRK03545 putative arabinose tr 99.9 1.9E-20 4E-25 176.9 28.2 294 3-371 84-380 (390)
28 PRK09556 uhpT sugar phosphate 99.9 2.4E-21 5.3E-26 187.1 21.5 314 11-375 117-454 (467)
29 PRK03893 putative sialic acid 99.9 2.2E-20 4.9E-25 181.9 25.7 344 3-373 95-456 (496)
30 TIGR00883 2A0106 metabolite-pr 99.9 3E-20 6.4E-25 175.1 23.8 280 3-348 75-377 (394)
31 TIGR00890 2A0111 Oxalate/Forma 99.9 1.4E-19 3.1E-24 169.5 25.3 292 3-363 78-374 (377)
32 TIGR00894 2A0114euk Na(+)-depe 99.9 1.4E-19 3E-24 174.9 25.4 314 4-370 117-449 (465)
33 PRK11273 glpT sn-glycerol-3-ph 99.9 3.4E-19 7.4E-24 171.4 27.0 322 4-376 104-441 (452)
34 PRK09705 cynX putative cyanate 99.9 6.8E-19 1.5E-23 166.3 27.7 302 2-380 83-390 (393)
35 PRK05122 major facilitator sup 99.9 6.2E-19 1.3E-23 167.0 27.2 287 15-381 111-398 (399)
36 TIGR00899 2A0120 sugar efflux 99.8 1.2E-18 2.5E-23 163.5 27.5 292 4-369 75-372 (375)
37 TIGR00712 glpT glycerol-3-phos 99.8 8.3E-19 1.8E-23 168.1 24.9 323 4-375 102-437 (438)
38 PLN00028 nitrate transmembrane 99.8 1.3E-18 2.9E-23 168.1 24.9 304 3-370 111-432 (476)
39 PRK03699 putative transporter; 99.8 2.3E-18 5.1E-23 162.7 24.3 305 3-380 82-388 (394)
40 PRK12382 putative transporter; 99.8 8E-18 1.7E-22 159.0 27.3 277 14-370 110-388 (392)
41 PRK11010 ampG muropeptide tran 99.8 1.1E-17 2.5E-22 162.0 28.7 298 6-370 94-402 (491)
42 cd06174 MFS The Major Facilita 99.8 1.1E-17 2.4E-22 154.9 27.3 274 3-369 74-350 (352)
43 TIGR00900 2A0121 H+ Antiporter 99.8 4.4E-18 9.4E-23 158.7 24.1 277 4-346 75-363 (365)
44 TIGR00881 2A0104 phosphoglycer 99.8 1.5E-18 3.3E-23 162.6 19.3 296 3-348 70-374 (379)
45 TIGR00711 efflux_EmrB drug res 99.8 8.7E-18 1.9E-22 163.3 24.9 320 3-345 77-409 (485)
46 PRK15011 sugar efflux transpor 99.8 4.7E-17 1E-21 153.8 28.5 297 4-374 93-393 (393)
47 PRK10504 putative transporter; 99.8 4.9E-17 1.1E-21 157.4 28.2 311 4-346 86-415 (471)
48 PRK10091 MFS transport protein 99.8 4.4E-17 9.6E-22 153.4 26.6 103 3-105 78-182 (382)
49 PRK10213 nepI ribonucleoside t 99.8 1.1E-16 2.5E-21 151.1 29.4 103 3-105 95-199 (394)
50 PRK09874 drug efflux system pr 99.8 1.8E-17 3.9E-22 157.4 23.7 300 4-370 95-397 (408)
51 KOG2532 Permease of the major 99.8 5.7E-18 1.2E-22 160.8 19.3 314 3-370 113-446 (466)
52 PRK11102 bicyclomycin/multidru 99.8 3.6E-16 7.8E-21 146.9 28.4 103 3-105 66-170 (377)
53 TIGR00710 efflux_Bcr_CflA drug 99.8 6E-16 1.3E-20 145.6 30.0 103 3-105 80-184 (385)
54 PF07690 MFS_1: Major Facilita 99.8 2.2E-17 4.7E-22 153.3 19.2 273 4-337 73-352 (352)
55 PRK14995 methyl viologen resis 99.8 1.6E-16 3.5E-21 154.5 25.8 319 2-345 80-412 (495)
56 KOG2533 Permease of the major 99.8 1E-17 2.2E-22 159.5 16.7 103 4-106 122-232 (495)
57 PRK10473 multidrug efflux syst 99.8 4.5E-16 9.7E-21 147.1 27.9 102 4-105 79-182 (392)
58 PRK15402 multidrug efflux syst 99.8 1.3E-15 2.7E-20 144.7 30.4 103 4-106 89-193 (406)
59 TIGR00892 2A0113 monocarboxyla 99.8 4.9E-17 1.1E-21 156.4 20.9 314 3-365 94-415 (455)
60 PRK15034 nitrate/nitrite trans 99.8 3.1E-16 6.7E-21 148.1 25.4 292 3-370 110-453 (462)
61 TIGR00897 2A0118 polyol permea 99.8 1.1E-15 2.4E-20 144.9 28.9 290 13-370 102-400 (402)
62 PRK11043 putative transporter; 99.8 2.2E-15 4.7E-20 142.9 29.4 103 3-105 81-184 (401)
63 PRK11902 ampG muropeptide tran 99.7 1.6E-15 3.4E-20 143.9 27.7 101 6-106 81-186 (402)
64 TIGR00901 2A0125 AmpG-related 99.7 3.3E-16 7.1E-21 146.0 21.2 261 5-330 69-355 (356)
65 PRK08633 2-acyl-glycerophospho 99.7 7.8E-16 1.7E-20 164.7 26.9 273 9-343 96-381 (1146)
66 PRK15403 multidrug efflux syst 99.7 9.5E-15 2.1E-19 138.9 28.8 103 3-105 91-195 (413)
67 PRK11195 lysophospholipid tran 99.7 3.5E-15 7.6E-20 140.9 25.6 297 5-370 80-379 (393)
68 PRK11646 multidrug resistance 99.7 7.6E-15 1.6E-19 139.0 27.5 99 4-103 87-187 (400)
69 PRK03633 putative MFS family t 99.7 1.6E-14 3.6E-19 135.9 27.7 284 3-365 81-366 (381)
70 TIGR00886 2A0108 nitrite extru 99.7 1.7E-15 3.6E-20 141.7 20.4 104 3-106 77-193 (366)
71 TIGR00792 gph sugar (Glycoside 99.7 1.1E-14 2.4E-19 139.6 26.2 315 5-388 82-436 (437)
72 PRK06814 acylglycerophosphoeth 99.7 2.7E-15 5.9E-20 160.3 24.1 269 12-345 104-395 (1140)
73 TIGR00902 2A0127 phenyl propri 99.7 3.6E-14 7.8E-19 133.6 27.6 284 10-365 88-373 (382)
74 COG2223 NarK Nitrate/nitrite t 99.7 4.5E-15 9.8E-20 134.4 20.2 293 7-370 93-400 (417)
75 PRK10133 L-fucose transporter; 99.7 5E-14 1.1E-18 134.8 27.4 283 4-355 102-417 (438)
76 TIGR00885 fucP L-fucose:H+ sym 99.6 1.2E-13 2.7E-18 130.9 26.7 261 13-346 91-381 (410)
77 TIGR00889 2A0110 nucleoside tr 99.6 6.7E-14 1.5E-18 133.2 25.0 141 237-377 257-408 (418)
78 PRK11128 putative 3-phenylprop 99.6 1.6E-13 3.4E-18 129.3 26.5 281 11-364 89-372 (382)
79 PRK10054 putative transporter; 99.6 5.1E-14 1.1E-18 133.1 22.3 293 4-368 84-381 (395)
80 PRK11652 emrD multidrug resist 99.6 4E-13 8.7E-18 127.1 28.2 103 3-105 83-187 (394)
81 TIGR00896 CynX cyanate transpo 99.6 1.7E-13 3.6E-18 127.8 23.1 268 5-348 77-350 (355)
82 KOG1330 Sugar transporter/spin 99.6 2.4E-15 5.2E-20 137.3 8.2 102 4-105 109-213 (493)
83 TIGR01272 gluP glucose/galacto 99.6 2.5E-12 5.4E-17 117.2 25.0 272 11-354 5-298 (310)
84 PRK09528 lacY galactoside perm 99.5 9.5E-13 2.1E-17 125.6 21.8 135 239-373 270-405 (420)
85 TIGR02718 sider_RhtX_FptX side 99.5 4E-12 8.7E-17 120.1 25.8 276 20-365 101-385 (390)
86 TIGR00882 2A0105 oligosacchari 99.5 6.7E-12 1.5E-16 118.8 23.3 132 238-369 261-393 (396)
87 PF11700 ATG22: Vacuole efflux 99.5 8.9E-11 1.9E-15 112.5 28.8 146 233-379 319-475 (477)
88 KOG2504 Monocarboxylate transp 99.5 7.8E-13 1.7E-17 127.4 14.2 344 2-370 120-475 (509)
89 TIGR00924 yjdL_sub1_fam amino 99.4 4.5E-11 9.7E-16 115.6 24.3 91 3-93 89-183 (475)
90 PF05977 MFS_3: Transmembrane 99.4 1E-10 2.2E-15 113.4 25.5 297 14-375 101-399 (524)
91 PTZ00207 hypothetical protein; 99.4 5.6E-11 1.2E-15 115.8 22.5 120 3-124 101-230 (591)
92 PF06609 TRI12: Fungal trichot 99.4 1.4E-10 3E-15 112.5 24.5 94 2-95 117-210 (599)
93 PRK10207 dipeptide/tripeptide 99.4 1.2E-10 2.6E-15 112.8 24.0 88 3-90 91-182 (489)
94 TIGR00806 rfc RFC reduced fola 99.4 8.9E-12 1.9E-16 116.3 15.1 102 3-105 102-206 (511)
95 PRK09584 tppB putative tripept 99.4 7.9E-11 1.7E-15 114.6 21.3 90 4-93 99-192 (500)
96 TIGR00788 fbt folate/biopterin 99.4 2.6E-11 5.7E-16 116.9 17.2 308 13-373 116-447 (468)
97 PRK09669 putative symporter Ya 99.3 9.3E-10 2E-14 105.8 26.3 106 241-346 274-388 (444)
98 TIGR00805 oat sodium-independe 99.3 5.4E-11 1.2E-15 118.5 16.7 89 16-104 172-283 (633)
99 KOG3764 Vesicular amine transp 99.3 1.8E-11 3.9E-16 110.0 11.4 99 4-102 147-247 (464)
100 TIGR00880 2_A_01_02 Multidrug 99.3 9.3E-11 2E-15 93.2 12.2 134 241-374 8-141 (141)
101 KOG2615 Permease of the major 99.2 2.3E-10 4.9E-15 102.5 15.0 101 4-104 109-216 (451)
102 TIGR02332 HpaX 4-hydroxyphenyl 99.2 4.8E-10 1E-14 106.6 18.2 139 238-376 50-194 (412)
103 TIGR01301 GPH_sucrose GPH fami 99.2 2.4E-09 5.2E-14 102.3 21.3 139 238-376 312-476 (477)
104 TIGR00895 2A0115 benzoate tran 99.2 3.3E-10 7.1E-15 106.9 15.5 138 238-375 59-196 (398)
105 PLN00028 nitrate transmembrane 99.2 9.4E-10 2E-14 106.6 18.6 136 238-374 78-222 (476)
106 TIGR00710 efflux_Bcr_CflA drug 99.2 4.5E-10 9.7E-15 105.6 16.0 141 237-377 46-186 (385)
107 PRK11551 putative 3-hydroxyphe 99.2 5.5E-10 1.2E-14 106.0 16.5 139 237-375 56-194 (406)
108 PF03825 Nuc_H_symport: Nucleo 99.2 3.5E-08 7.5E-13 92.9 28.2 138 238-375 250-399 (400)
109 PRK10429 melibiose:sodium symp 99.2 2.2E-08 4.8E-13 97.1 26.1 107 239-345 274-392 (473)
110 PF07690 MFS_1: Major Facilita 99.2 1.3E-09 2.9E-14 100.9 16.9 139 237-375 38-176 (352)
111 COG0738 FucP Fucose permease [ 99.2 2.4E-08 5.3E-13 90.6 23.9 269 12-354 100-392 (422)
112 TIGR01299 synapt_SV2 synaptic 99.2 1.8E-09 3.8E-14 108.5 18.3 108 237-344 208-315 (742)
113 TIGR00891 2A0112 putative sial 99.2 2.4E-09 5.3E-14 101.3 18.3 138 237-375 53-192 (405)
114 PRK11462 putative transporter; 99.1 5.6E-08 1.2E-12 93.8 27.5 66 38-103 132-206 (460)
115 PF13347 MFS_2: MFS/sugar tran 99.1 1.5E-08 3.2E-13 97.0 23.3 258 18-345 105-383 (428)
116 PRK10054 putative transporter; 99.1 1.2E-09 2.7E-14 103.2 15.6 136 238-374 50-185 (395)
117 TIGR00893 2A0114 d-galactonate 99.1 7.9E-10 1.7E-14 103.9 14.2 140 237-376 35-174 (399)
118 PRK10642 proline/glycine betai 99.1 2.4E-10 5.2E-15 111.3 10.9 113 12-125 338-458 (490)
119 PRK15403 multidrug efflux syst 99.1 1.4E-09 3E-14 103.5 15.7 138 239-376 59-196 (413)
120 PRK15402 multidrug efflux syst 99.1 1.9E-09 4.2E-14 102.3 16.5 140 237-376 54-193 (406)
121 PRK10473 multidrug efflux syst 99.1 1.7E-09 3.7E-14 102.2 16.0 141 237-377 44-184 (392)
122 PRK10213 nepI ribonucleoside t 99.1 3.6E-09 7.7E-14 100.1 18.0 137 239-375 63-199 (394)
123 COG2270 Permeases of the major 99.1 1.5E-08 3.2E-13 92.6 20.5 149 231-379 288-436 (438)
124 PRK12307 putative sialic acid 99.1 3.9E-09 8.5E-14 100.9 17.3 119 237-355 59-177 (426)
125 PRK11663 regulatory protein Uh 99.1 4E-09 8.7E-14 101.1 17.1 138 237-374 64-201 (434)
126 PRK10504 putative transporter; 99.1 4.6E-09 1E-13 101.8 17.2 137 239-375 53-189 (471)
127 PRK03893 putative sialic acid 99.1 5.4E-09 1.2E-13 102.0 17.3 117 238-354 62-178 (496)
128 TIGR00711 efflux_EmrB drug res 99.1 2.3E-09 5E-14 104.2 14.6 139 237-375 43-181 (485)
129 PRK11273 glpT sn-glycerol-3-ph 99.1 6.7E-09 1.5E-13 100.1 17.3 139 237-375 69-212 (452)
130 PRK15462 dipeptide/tripeptide 99.1 6.4E-09 1.4E-13 99.8 16.4 127 239-365 53-183 (493)
131 PRK03699 putative transporter; 99.1 1.5E-08 3.3E-13 95.8 18.9 130 238-367 49-179 (394)
132 TIGR00887 2A0109 phosphate:H+ 99.1 1.2E-08 2.6E-13 99.7 18.6 106 237-342 62-173 (502)
133 TIGR00900 2A0121 H+ Antiporter 99.0 6.9E-09 1.5E-13 96.6 16.0 133 237-369 40-177 (365)
134 PRK11102 bicyclomycin/multidru 99.0 2.4E-09 5.1E-14 100.6 12.6 138 238-375 33-170 (377)
135 PRK03545 putative arabinose tr 99.0 9.7E-09 2.1E-13 97.0 16.6 136 239-374 52-187 (390)
136 TIGR00881 2A0104 phosphoglycer 99.0 1.4E-09 3.1E-14 101.7 10.7 139 237-375 36-175 (379)
137 PRK14995 methyl viologen resis 99.0 1.9E-08 4.1E-13 98.1 17.7 137 240-376 50-187 (495)
138 PRK09874 drug efflux system pr 99.0 2.2E-08 4.7E-13 95.1 17.7 136 238-374 61-196 (408)
139 PRK10091 MFS transport protein 99.0 1.1E-08 2.4E-13 96.3 15.5 139 237-375 44-182 (382)
140 PRK11652 emrD multidrug resist 99.0 2.1E-08 4.5E-13 94.9 17.0 140 237-376 49-188 (394)
141 COG2807 CynX Cyanate permease 99.0 3.7E-07 8E-12 81.9 23.4 262 15-352 98-365 (395)
142 PRK11646 multidrug resistance 99.0 2.6E-08 5.6E-13 94.4 17.0 133 241-374 56-188 (400)
143 TIGR00712 glpT glycerol-3-phos 99.0 1.3E-08 2.8E-13 97.7 14.8 139 237-375 67-210 (438)
144 KOG0255 Synaptic vesicle trans 99.0 1.1E-08 2.3E-13 100.6 14.2 136 237-376 124-259 (521)
145 PRK11043 putative transporter; 99.0 3E-08 6.6E-13 94.0 16.7 138 237-374 47-184 (401)
146 TIGR00886 2A0108 nitrite extru 99.0 2.3E-08 5E-13 93.4 15.6 107 237-344 43-150 (366)
147 TIGR00903 2A0129 major facilit 99.0 1.8E-08 3.9E-13 94.2 14.7 136 239-375 34-169 (368)
148 TIGR00898 2A0119 cation transp 99.0 1.3E-08 2.7E-13 99.7 14.3 135 237-375 133-267 (505)
149 KOG4686 Predicted sugar transp 98.9 1.7E-08 3.6E-13 87.1 12.7 124 244-370 313-442 (459)
150 TIGR00894 2A0114euk Na(+)-depe 98.9 6.9E-09 1.5E-13 100.4 11.4 135 240-374 85-222 (465)
151 PRK09848 glucuronide transport 98.9 6.5E-07 1.4E-11 86.2 24.8 104 242-345 275-387 (448)
152 TIGR00924 yjdL_sub1_fam amino 98.9 6.1E-08 1.3E-12 93.9 16.5 128 238-365 55-186 (475)
153 TIGR00879 SP MFS transporter, 98.9 2E-08 4.4E-13 97.0 13.1 138 237-375 77-220 (481)
154 COG2211 MelB Na+/melibiose sym 98.9 1.2E-06 2.6E-11 82.5 24.3 109 237-345 278-395 (467)
155 PRK15034 nitrate/nitrite trans 98.9 2.6E-07 5.5E-12 87.9 19.9 146 237-383 76-246 (462)
156 cd06174 MFS The Major Facilita 98.9 5.5E-08 1.2E-12 89.9 14.9 131 237-367 40-170 (352)
157 PRK11195 lysophospholipid tran 98.9 7.9E-08 1.7E-12 90.9 16.1 133 238-375 45-177 (393)
158 PRK10489 enterobactin exporter 98.8 8.1E-08 1.8E-12 91.6 15.0 137 237-374 58-199 (417)
159 TIGR00890 2A0111 Oxalate/Forma 98.8 5.4E-08 1.2E-12 91.0 13.3 136 237-373 44-179 (377)
160 PRK15075 citrate-proton sympor 98.8 1.9E-07 4.2E-12 89.5 17.3 98 245-342 70-175 (434)
161 KOG2615 Permease of the major 98.8 7.7E-09 1.7E-13 92.8 7.0 104 241-345 78-181 (451)
162 PRK10077 xylE D-xylose transpo 98.8 6.8E-08 1.5E-12 93.8 14.2 138 237-375 61-218 (479)
163 PRK10207 dipeptide/tripeptide 98.8 1.4E-07 3E-12 91.5 16.0 113 244-356 63-179 (489)
164 COG2271 UhpC Sugar phosphate p 98.8 5.6E-08 1.2E-12 88.8 12.0 139 236-374 69-209 (448)
165 PRK10406 alpha-ketoglutarate t 98.8 4.3E-07 9.3E-12 87.1 18.4 136 239-375 71-222 (432)
166 PRK05122 major facilitator sup 98.8 2.4E-07 5.3E-12 87.7 16.2 123 237-359 57-187 (399)
167 PRK09556 uhpT sugar phosphate 98.8 6E-08 1.3E-12 93.9 12.1 133 239-371 72-212 (467)
168 PF01306 LacY_symp: LacY proto 98.8 2.8E-06 6.2E-11 79.1 22.4 138 239-376 267-405 (412)
169 PF05977 MFS_3: Transmembrane 98.8 2.6E-07 5.7E-12 89.8 15.9 135 240-374 54-193 (524)
170 TIGR00897 2A0118 polyol permea 98.8 2.1E-07 4.6E-12 88.3 15.2 112 237-348 54-170 (402)
171 TIGR00880 2_A_01_02 Multidrug 98.7 7.9E-08 1.7E-12 76.1 10.0 101 4-104 39-141 (141)
172 COG2814 AraJ Arabinose efflux 98.7 4.7E-07 1E-11 83.5 16.1 136 237-372 54-189 (394)
173 COG2223 NarK Nitrate/nitrite t 98.7 8.3E-07 1.8E-11 81.3 17.2 138 234-373 52-195 (417)
174 PRK03633 putative MFS family t 98.7 7.1E-07 1.5E-11 84.1 17.4 111 236-346 46-156 (381)
175 PRK09952 shikimate transporter 98.7 2.7E-07 5.9E-12 88.6 13.9 103 240-342 73-183 (438)
176 TIGR00892 2A0113 monocarboxyla 98.7 3.8E-07 8.3E-12 88.0 14.8 130 242-372 65-195 (455)
177 PRK09584 tppB putative tripept 98.7 6.5E-07 1.4E-11 87.3 16.2 112 247-358 73-188 (500)
178 PRK12382 putative transporter; 98.7 5.7E-07 1.2E-11 85.0 14.9 112 237-348 57-176 (392)
179 TIGR00899 2A0120 sugar efflux 98.7 3.2E-07 7E-12 85.9 12.9 137 239-375 41-180 (375)
180 PRK09705 cynX putative cyanate 98.6 5.7E-07 1.2E-11 85.1 13.4 124 238-362 51-175 (393)
181 TIGR00885 fucP L-fucose:H+ sym 98.6 2.1E-06 4.6E-11 81.6 17.2 108 237-344 44-154 (410)
182 TIGR00883 2A0106 metabolite-pr 98.6 7.5E-07 1.6E-11 83.7 13.8 101 243-343 47-155 (394)
183 KOG3764 Vesicular amine transp 98.6 1.1E-07 2.4E-12 86.0 7.6 139 239-377 114-253 (464)
184 PRK06814 acylglycerophosphoeth 98.6 1.6E-06 3.5E-11 93.3 17.7 135 239-374 60-197 (1140)
185 PRK08633 2-acyl-glycerophospho 98.6 1.8E-06 3.8E-11 93.1 17.7 108 239-346 55-165 (1146)
186 KOG1330 Sugar transporter/spin 98.6 5.2E-08 1.1E-12 89.9 4.5 143 239-381 76-219 (493)
187 KOG0254 Predicted transporter 98.6 1.3E-06 2.7E-11 85.7 14.0 138 237-376 95-234 (513)
188 KOG0569 Permease of the major 98.5 1.1E-06 2.4E-11 83.5 12.8 134 241-376 70-209 (485)
189 PRK11010 ampG muropeptide tran 98.5 3.6E-06 7.8E-11 82.0 16.8 129 246-375 60-198 (491)
190 PF06609 TRI12: Fungal trichot 98.5 3.9E-06 8.5E-11 81.9 16.6 148 238-387 85-240 (599)
191 KOG2563 Permease of the major 98.5 4.7E-06 1E-10 77.0 15.9 145 237-381 307-460 (480)
192 TIGR00901 2A0125 AmpG-related 98.5 2.1E-06 4.6E-11 79.9 14.0 128 248-375 38-182 (356)
193 TIGR01301 GPH_sucrose GPH fami 98.5 4.5E-06 9.7E-11 80.0 16.0 139 237-375 45-222 (477)
194 PRK10133 L-fucose transporter; 98.5 1.3E-05 2.7E-10 77.0 18.3 108 236-343 66-176 (438)
195 PTZ00207 hypothetical protein; 98.5 9.7E-06 2.1E-10 79.5 17.4 121 247-370 77-204 (591)
196 PRK15462 dipeptide/tripeptide 98.5 0.00018 3.9E-09 69.5 25.7 75 19-93 103-180 (493)
197 PRK09528 lacY galactoside perm 98.4 1.6E-05 3.5E-10 75.9 18.2 138 236-374 51-194 (420)
198 TIGR00896 CynX cyanate transpo 98.4 4.7E-06 1E-10 77.6 13.8 108 237-346 41-148 (355)
199 PRK15011 sugar efflux transpor 98.4 2.4E-05 5.2E-10 74.0 17.9 132 243-375 64-198 (393)
200 PF03092 BT1: BT1 family; Int 98.4 2E-05 4.3E-10 75.4 16.9 89 15-103 85-177 (433)
201 TIGR00806 rfc RFC reduced fola 98.3 9.5E-06 2.1E-10 76.5 13.1 130 241-371 72-203 (511)
202 TIGR00805 oat sodium-independe 98.3 6.1E-06 1.3E-10 82.6 12.7 106 240-345 77-233 (633)
203 KOG2532 Permease of the major 98.3 9.3E-06 2E-10 77.8 13.2 131 241-371 83-216 (466)
204 PRK11902 ampG muropeptide tran 98.3 4.4E-05 9.5E-10 72.4 16.5 130 245-375 46-185 (402)
205 KOG2325 Predicted transporter/ 98.3 5.9E-06 1.3E-10 78.2 10.0 60 15-74 129-188 (488)
206 TIGR00882 2A0105 oligosacchari 98.2 5.5E-05 1.2E-09 71.6 16.6 136 236-374 43-186 (396)
207 PF00083 Sugar_tr: Sugar (and 98.2 2.1E-08 4.6E-13 96.6 -8.6 104 237-340 52-158 (451)
208 TIGR00889 2A0110 nucleoside tr 98.2 5E-06 1.1E-10 79.3 7.5 89 16-104 308-405 (418)
209 PF01770 Folate_carrier: Reduc 98.1 0.00027 5.8E-09 65.8 17.8 99 8-106 86-186 (412)
210 PF03209 PUCC: PUCC protein; 98.1 0.0025 5.4E-08 59.0 23.0 72 19-90 92-165 (403)
211 PF03137 OATP: Organic Anion T 98.1 6.9E-07 1.5E-11 87.2 0.0 59 16-74 141-200 (539)
212 TIGR00792 gph sugar (Glycoside 98.1 9.4E-05 2E-09 70.9 14.2 139 237-375 41-198 (437)
213 KOG2816 Predicted transporter 98.0 5.1E-05 1.1E-09 72.5 11.2 137 241-380 72-208 (463)
214 COG3104 PTR2 Dipeptide/tripept 98.0 6E-05 1.3E-09 70.9 10.9 127 245-371 75-206 (498)
215 KOG2504 Monocarboxylate transp 98.0 9.5E-05 2.1E-09 71.8 12.4 130 243-374 93-224 (509)
216 TIGR00902 2A0127 phenyl propri 97.8 0.00055 1.2E-08 64.5 14.7 119 239-359 47-167 (382)
217 PF06813 Nodulin-like: Nodulin 97.8 0.00031 6.8E-09 61.3 11.8 108 237-346 43-157 (250)
218 KOG2533 Permease of the major 97.8 0.00022 4.8E-09 68.7 11.5 140 237-376 87-232 (495)
219 PRK11128 putative 3-phenylprop 97.8 0.00099 2.1E-08 62.7 15.4 135 237-374 45-181 (382)
220 TIGR02718 sider_RhtX_FptX side 97.7 0.00082 1.8E-08 63.4 14.1 70 305-374 118-187 (390)
221 KOG3098 Uncharacterized conser 97.7 0.011 2.5E-07 56.1 20.6 57 14-70 100-157 (461)
222 KOG2816 Predicted transporter 97.7 0.01 2.2E-07 57.0 20.5 261 25-344 119-390 (463)
223 COG0738 FucP Fucose permease [ 97.7 0.0028 6.1E-08 58.3 15.5 109 237-345 54-165 (422)
224 KOG3626 Organic anion transpor 97.5 0.003 6.4E-08 62.9 14.9 87 18-104 239-345 (735)
225 PRK11462 putative transporter; 97.5 0.0027 5.8E-08 61.5 14.6 133 241-374 55-207 (460)
226 TIGR00788 fbt folate/biopterin 97.5 0.0014 2.9E-08 63.6 12.6 125 249-375 78-212 (468)
227 PRK09669 putative symporter Ya 97.5 0.00074 1.6E-08 65.0 10.4 137 238-374 52-207 (444)
228 PF13347 MFS_2: MFS/sugar tran 97.5 0.00043 9.3E-09 66.3 8.4 130 244-373 50-200 (428)
229 KOG0252 Inorganic phosphate tr 97.5 0.00058 1.3E-08 63.6 8.6 94 236-329 89-189 (538)
230 PRK10429 melibiose:sodium symp 97.4 0.0032 6.9E-08 61.2 13.7 137 238-374 49-204 (473)
231 KOG3762 Predicted transporter 97.3 0.0059 1.3E-07 58.2 13.3 130 238-367 413-543 (618)
232 COG3104 PTR2 Dipeptide/tripept 97.3 0.019 4.2E-07 54.4 16.6 94 3-96 102-200 (498)
233 PF11700 ATG22: Vacuole efflux 97.2 0.0086 1.9E-07 57.9 14.1 138 239-376 78-252 (477)
234 KOG3810 Micronutrient transpor 97.2 0.0033 7.2E-08 56.6 9.5 95 12-106 91-187 (433)
235 PF02487 CLN3: CLN3 protein; 97.0 0.13 2.9E-06 48.1 19.3 97 3-104 99-198 (402)
236 KOG0253 Synaptic vesicle trans 96.9 0.025 5.4E-07 51.7 12.5 132 241-375 123-254 (528)
237 PF01306 LacY_symp: LacY proto 96.8 0.011 2.3E-07 55.6 10.3 130 240-373 52-190 (412)
238 TIGR00926 2A1704 Peptide:H+ sy 96.7 0.05 1.1E-06 54.7 15.0 100 245-344 37-148 (654)
239 TIGR00769 AAA ADP/ATP carrier 96.7 0.18 3.9E-06 48.6 17.9 41 304-344 149-189 (472)
240 KOG2563 Permease of the major 96.7 0.039 8.4E-07 51.8 12.6 110 237-346 85-202 (480)
241 PF05631 DUF791: Protein of un 96.5 0.27 5.9E-06 45.0 16.6 133 244-377 82-222 (354)
242 COG0477 ProP Permeases of the 96.3 0.03 6.4E-07 49.9 9.9 88 6-93 82-176 (338)
243 PF03092 BT1: BT1 family; Int 96.3 0.019 4.1E-07 55.0 8.7 128 248-376 41-180 (433)
244 PF06963 FPN1: Ferroportin1 (F 96.3 1.1 2.4E-05 42.7 22.3 101 237-337 299-409 (432)
245 COG2211 MelB Na+/melibiose sym 96.2 0.094 2E-06 50.1 12.3 131 245-375 62-211 (467)
246 PF03825 Nuc_H_symport: Nucleo 96.1 0.22 4.7E-06 47.2 14.6 98 237-336 43-141 (400)
247 PRK09848 glucuronide transport 95.8 0.3 6.5E-06 47.0 14.3 29 237-265 50-82 (448)
248 PF05978 UNC-93: Ion channel r 95.7 0.24 5.2E-06 40.0 11.2 104 236-340 42-145 (156)
249 PF06813 Nodulin-like: Nodulin 95.5 0.083 1.8E-06 46.3 8.6 88 14-102 94-182 (250)
250 KOG3762 Predicted transporter 95.0 0.037 8E-07 53.0 5.0 88 11-98 454-543 (618)
251 PF07672 MFS_Mycoplasma: Mycop 95.0 0.67 1.5E-05 40.5 12.1 54 46-99 1-59 (267)
252 PF00854 PTR2: POT family; In 94.7 0.089 1.9E-06 49.3 6.9 82 17-98 34-119 (372)
253 COG0477 ProP Permeases of the 94.7 0.43 9.3E-06 42.2 11.2 105 241-345 49-157 (338)
254 PF03209 PUCC: PUCC protein; 94.2 0.29 6.2E-06 45.6 8.6 48 303-350 108-155 (403)
255 TIGR01272 gluP glucose/galacto 93.8 0.25 5.3E-06 45.1 7.5 43 303-345 29-71 (310)
256 KOG2325 Predicted transporter/ 93.4 0.92 2E-05 43.7 10.7 135 238-375 78-233 (488)
257 TIGR00939 2a57 Equilibrative N 92.3 11 0.00024 36.2 18.7 37 303-339 391-427 (437)
258 PF05978 UNC-93: Ion channel r 90.5 0.99 2.1E-05 36.4 6.4 63 12-74 85-148 (156)
259 COG2807 CynX Cyanate permease 89.8 10 0.00023 35.1 12.8 127 237-365 53-180 (395)
260 PF12832 MFS_1_like: MFS_1 lik 89.5 5.5 0.00012 27.7 8.9 33 237-269 41-73 (77)
261 PF03219 TLC: TLC ATP/ADP tran 89.5 22 0.00048 34.7 17.1 42 304-345 164-205 (491)
262 COG2270 Permeases of the major 88.5 2.5 5.4E-05 39.7 8.2 91 13-103 338-430 (438)
263 PF01770 Folate_carrier: Reduc 87.8 14 0.00031 35.0 12.7 122 248-372 58-183 (412)
264 KOG3098 Uncharacterized conser 86.7 24 0.00052 34.0 13.8 102 235-337 54-155 (461)
265 PF02487 CLN3: CLN3 protein; 86.3 1.6 3.4E-05 41.1 5.6 63 12-74 331-394 (402)
266 TIGR00926 2A1704 Peptide:H+ sy 85.3 46 0.001 33.9 21.3 78 19-96 88-176 (654)
267 PF13000 Acatn: Acetyl-coenzym 84.2 12 0.00025 36.3 10.2 28 251-278 60-88 (544)
268 PF13000 Acatn: Acetyl-coenzym 82.7 49 0.0011 32.2 17.1 42 304-345 425-466 (544)
269 PF01733 Nucleoside_tran: Nucl 81.1 0.36 7.8E-06 44.0 -0.9 35 303-337 267-301 (309)
270 KOG3574 Acetyl-CoA transporter 80.1 18 0.00039 33.9 9.5 30 250-279 82-117 (510)
271 PF06963 FPN1: Ferroportin1 (F 77.4 34 0.00074 32.8 11.1 54 314-367 143-196 (432)
272 PF00854 PTR2: POT family; In 76.7 14 0.0003 34.5 8.4 67 303-369 52-121 (372)
273 KOG4332 Predicted sugar transp 75.4 60 0.0013 29.0 14.0 65 9-73 117-185 (454)
274 PF06779 DUF1228: Protein of u 74.2 14 0.00031 26.3 5.8 47 237-283 33-79 (85)
275 PRK03612 spermidine synthase; 71.1 1.1E+02 0.0024 30.2 14.8 43 319-361 144-187 (521)
276 PF05631 DUF791: Protein of un 68.0 1E+02 0.0022 28.6 18.3 85 10-94 115-208 (354)
277 TIGR00769 AAA ADP/ATP carrier 56.9 2E+02 0.0043 28.1 23.4 39 37-75 151-189 (472)
278 PF03219 TLC: TLC ATP/ADP tran 56.4 2.1E+02 0.0045 28.1 17.0 40 37-76 166-205 (491)
279 PF11151 DUF2929: Protein of u 53.6 60 0.0013 21.1 6.0 43 63-105 14-56 (57)
280 KOG3880 Predicted small molecu 50.4 29 0.00062 31.6 4.5 65 10-74 336-401 (409)
281 KOG3626 Organic anion transpor 49.2 77 0.0017 32.6 7.8 43 304-346 606-649 (735)
282 PF11947 DUF3464: Protein of u 47.6 64 0.0014 25.8 5.7 80 254-334 57-144 (153)
283 TIGR00939 2a57 Equilibrative N 45.3 45 0.00097 32.1 5.4 61 14-74 370-431 (437)
284 KOG4686 Predicted sugar transp 44.2 69 0.0015 29.0 5.8 68 20-87 356-427 (459)
285 COG5336 Uncharacterized protei 38.7 1.5E+02 0.0033 22.1 5.9 55 314-368 36-92 (116)
286 KOG1237 H+/oligopeptide sympor 38.4 76 0.0017 31.7 6.0 77 18-94 154-237 (571)
287 PF04281 Tom22: Mitochondrial 37.4 90 0.0019 24.5 5.0 23 40-62 60-82 (137)
288 PF06341 DUF1056: Protein of u 36.0 29 0.00062 23.0 1.7 36 15-50 27-62 (63)
289 PRK10697 DNA-binding transcrip 35.8 48 0.001 25.2 3.2 13 95-107 57-69 (118)
290 PF12854 PPR_1: PPR repeat 35.4 35 0.00076 19.2 1.9 17 108-124 17-33 (34)
291 KOG0637 Sucrose transporter an 35.4 1.2E+02 0.0026 29.4 6.3 43 37-83 164-207 (498)
292 PF01733 Nucleoside_tran: Nucl 32.9 17 0.00038 33.0 0.5 61 13-73 245-306 (309)
293 COG3202 ATP/ADP translocase [E 32.7 4.9E+02 0.011 25.6 17.1 41 304-344 168-208 (509)
294 PF04024 PspC: PspC domain; I 32.1 50 0.0011 21.8 2.4 29 77-105 28-60 (61)
295 TIGR00986 3a0801s05tom22 mitoc 31.0 1.2E+02 0.0025 24.0 4.6 22 40-61 58-79 (145)
296 KOG1479 Nucleoside transporter 30.6 4.8E+02 0.01 24.8 13.1 38 299-336 357-395 (406)
297 smart00793 AgrB Accessory gene 30.1 1.7E+02 0.0036 24.3 5.9 26 358-383 106-132 (184)
298 TIGR00756 PPR pentatricopeptid 29.0 99 0.0021 16.4 3.3 20 108-127 10-29 (35)
299 COG5336 Uncharacterized protei 28.7 1.9E+02 0.004 21.7 5.0 20 249-268 60-80 (116)
300 PF01535 PPR: PPR repeat; Int 28.6 59 0.0013 17.0 2.1 18 109-126 11-28 (31)
301 PF04281 Tom22: Mitochondrial 27.6 1.3E+02 0.0028 23.7 4.4 22 309-330 60-81 (137)
302 PF11990 DUF3487: Protein of u 27.1 2.9E+02 0.0063 21.2 6.4 38 45-82 15-52 (121)
303 PF06779 DUF1228: Protein of u 27.0 2.4E+02 0.0051 20.1 6.7 40 54-93 30-69 (85)
304 KOG2765 Predicted membrane pro 26.5 1.7E+02 0.0037 27.3 5.5 22 182-203 157-178 (416)
305 PF13428 TPR_14: Tetratricopep 26.5 1.2E+02 0.0027 17.8 3.5 21 107-127 10-30 (44)
306 TIGR02978 phageshock_pspC phag 25.6 1.2E+02 0.0026 23.3 3.8 30 77-106 28-63 (121)
307 PRK03612 spermidine synthase; 25.3 2.9E+02 0.0064 27.3 7.6 68 21-89 115-185 (521)
308 COG4708 Predicted membrane pro 25.0 1.2E+02 0.0027 23.9 3.8 28 235-262 138-165 (169)
309 PF13041 PPR_2: PPR repeat fam 24.3 1.3E+02 0.0029 18.2 3.4 20 108-127 13-32 (50)
310 PRK01100 putative accessory ge 24.2 2.6E+02 0.0056 23.8 6.1 20 361-380 121-141 (210)
311 COG4291 Predicted membrane pro 23.9 2.4E+02 0.0051 23.8 5.4 18 99-116 65-82 (228)
312 PF04647 AgrB: Accessory gene 23.8 2.4E+02 0.0053 23.1 5.9 25 359-383 107-132 (185)
313 PF11460 DUF3007: Protein of u 23.5 3.1E+02 0.0068 20.3 6.0 42 80-121 37-78 (104)
314 PF11460 DUF3007: Protein of u 22.1 2.1E+02 0.0045 21.2 4.3 30 358-387 43-72 (104)
315 KOG0637 Sucrose transporter an 20.9 94 0.002 30.0 3.0 38 300-337 158-196 (498)
316 PF10183 ESSS: ESSS subunit of 20.8 1.3E+02 0.0029 22.3 3.2 29 77-105 56-85 (105)
317 PRK10263 DNA translocase FtsK; 20.8 1.2E+03 0.027 26.2 12.1 20 241-260 62-81 (1355)
318 PF13812 PPR_3: Pentatricopept 20.7 1.5E+02 0.0032 15.8 2.8 18 110-127 13-30 (34)
319 KOG1479 Nucleoside transporter 20.4 1.7E+02 0.0037 27.8 4.6 60 14-73 341-401 (406)
320 KOG3097 Predicted membrane pro 20.4 7.1E+02 0.015 23.2 9.8 31 244-274 71-101 (390)
321 PF10183 ESSS: ESSS subunit of 20.0 1.6E+02 0.0035 21.9 3.5 21 356-377 67-87 (105)
No 1
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=4.9e-51 Score=355.95 Aligned_cols=366 Identities=40% Similarity=0.668 Sum_probs=302.8
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
..++.++.+++||+..+.++|.+.|+|.|+.|...++..|..|..+|+..+.+. ..|.+|++....+++....++||||
T Consensus 153 t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~ 231 (528)
T KOG0253|consen 153 TGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRY 231 (528)
T ss_pred HHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 467788899999999999999999999999888888889999999999888777 9999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccc
Q 016515 83 LLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTR 162 (388)
Q Consensus 83 ~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
.....++|..+...+.+++||||||++.+||.+||.+.|+|+++.|++..|.+.+......+.+++.....+.
T Consensus 232 ~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~------- 304 (528)
T KOG0253|consen 232 LLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDS------- 304 (528)
T ss_pred HHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhh-------
Confidence 9999999988888889999999999999999999999999999999999988765543322222211111110
Q ss_pred cccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcc------ccc---CCCCCchh
Q 016515 163 KITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKV------LHA---DKSKDNSL 233 (388)
Q Consensus 163 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~ 233 (388)
+ ....+........++.++.+++++++|.+|+.+.+.||+..+++..+.+.+..|+... .+. ...+....
T Consensus 305 ~-~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~d 383 (528)
T KOG0253|consen 305 K-SSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKD 383 (528)
T ss_pred h-hccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhH
Confidence 0 0111222235567889999999999999999999999999988887765555443321 111 11222345
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 234 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
|.+.++..+.++||.++.++++||+|||+.+..+.+.++++.+++....+.....++.|...++..+.+.+.|.|++|+|
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVy 463 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVY 463 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCccc
Confidence 78899999999999999999999999999999999999998888776554445567788888999999999999999999
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcch
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGREL 379 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l 379 (388)
|+.+|++|.|.|...+|+|++++|+++ +....+.+.+..+|+.+++++.+++.++|-|||||++
T Consensus 464 PTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 464 PTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred chhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999999999999999987 3555567788999999999999999999999999986
No 2
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.7e-40 Score=305.45 Aligned_cols=346 Identities=21% Similarity=0.303 Sum_probs=251.5
Q ss_pred hhhhhhhcCccHHHHHHHHHHhhccCcchh-hHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH--HhcccchH
Q 016515 5 VAGLLSSFSPNYVSLVIFRCFVGVGLGGVP-VFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV--VMTRLNWR 81 (388)
Q Consensus 5 i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~--~~~~~~WR 81 (388)
+....+...+++++++++|++.|+..|... ...-|+.|++|++.||....+.+.+..+|.+++..++.- +.+...|+
T Consensus 105 ~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~ 184 (485)
T KOG0569|consen 105 LLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWP 184 (485)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchH
Confidence 334444567899999999999999998764 556799999999999999999999999999999777644 34567899
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCchHHHh-ccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESPRYLCA-KARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
+.+.+..+|+++.++...++||||+||.. |||.|||++.+++.+..++.+ . +.+++.+..+++
T Consensus 185 ~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~---------~--~~e~~~~e~~~~----- 248 (485)
T KOG0569|consen 185 YLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVE---------A--EIEEMLREIEEE----- 248 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcch---------h--HHHHHHHHHHHh-----
Confidence 99999999999999999999999999998 899999999999986542111 0 111111100000
Q ss_pred cccccccccccchhhhhhcc-hhHHHHHHHHHHHHHHH------HHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchh
Q 016515 161 TRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFAN------VFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSL 233 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (388)
+.+++...+++++++ +.+++...+.....+++ ...+|...++.+. ....+...
T Consensus 249 -----~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a---------------G~~~~~a~ 308 (485)
T KOG0569|consen 249 -----ELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA---------------GFTPEEAQ 308 (485)
T ss_pred -----ccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc---------------CCCHHHHH
Confidence 000111234555554 45555544444433332 3445555554420 01112223
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh----hch--hHHH---HHHHHH-HHHhhhcccc
Q 016515 234 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF----HQS--AVVT---TVLLFG-VRMCVTGTIT 303 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~----~~~--~~~~---~~~~~~-~~~~~~~~~~ 303 (388)
+ .....++..++.++++.+++||+|||++++.+..++.++.+.+.. .+. .+.. +...+. ...+..|..+
T Consensus 309 ~-an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gp 387 (485)
T KOG0569|consen 309 Y-ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGP 387 (485)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCc
Confidence 3 345567778999999999999999999999988877766555432 111 1221 111111 2234467789
Q ss_pred eeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhhH
Q 016515 304 VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTV 383 (388)
Q Consensus 304 ~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~~~ 383 (388)
++|.+.+|++|++.|+++.+++..+.|+.+++..+..+.+.+..+. ..+++|.+.++++.+..++++||||||+.+|+.
T Consensus 388 i~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~ 466 (485)
T KOG0569|consen 388 IPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEII 466 (485)
T ss_pred hhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 9999999999999999999999999999999998888888777765 678999999999999999999999999999999
Q ss_pred HhhhC
Q 016515 384 DAIES 388 (388)
Q Consensus 384 ~~~~~ 388 (388)
+++|+
T Consensus 467 ~~~~~ 471 (485)
T KOG0569|consen 467 EELEK 471 (485)
T ss_pred HHHHh
Confidence 99874
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=8.2e-40 Score=324.13 Aligned_cols=375 Identities=24% Similarity=0.386 Sum_probs=264.0
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc----
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR---- 77 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~---- 77 (388)
.+++++++++++++++++++|+++|++.|+. +....++.|++|+++||+..+..+.++.+|.++++.++..+.+.
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 4577888889999999999999999999875 67788999999999999999999999999999998877665432
Q ss_pred ---------cchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCC-ccccchhhhhhh
Q 016515 78 ---------LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPG-ILVSDKAIKENE 147 (388)
Q Consensus 78 ---------~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~ 147 (388)
.+||+++++.++|.++.++.++++||||+||..|||.+||.++++++.+.|.+..... ........+..+
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~ 401 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIH 401 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhh
Confidence 4799999999999888888888999999999999999999999999988775432110 000000000000
Q ss_pred -hchhhhcc-ccccc----cccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC------
Q 016515 148 -ESNLLRDT-HMLSM----TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGD------ 215 (388)
Q Consensus 148 -~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 215 (388)
..+..+.+ ..... ...........+..++.+|+++++++++++|+.|++..+.||++..|.+.+....
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~ 481 (742)
T TIGR01299 402 QEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYA 481 (742)
T ss_pred hhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 00000 0000001111234577799999999999999999999999999988877542110
Q ss_pred --------------------------------------------------CCCCCcccccC-------------------
Q 016515 216 --------------------------------------------------NKCGSKVLHAD------------------- 226 (388)
Q Consensus 216 --------------------------------------------------~~~~~~~~~~~------------------- 226 (388)
..|..+.....
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 561 (742)
T TIGR01299 482 ALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDF 561 (742)
T ss_pred hhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccch
Confidence 00000000000
Q ss_pred ---------------------CC-----C---CchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Q 016515 227 ---------------------KS-----K---DNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP 277 (388)
Q Consensus 227 ---------------------~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~ 277 (388)
.+ . ....+....+.+++.++|.+++++++||+|||++++.+.++++++.+.
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll 641 (742)
T TIGR01299 562 EEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFF 641 (742)
T ss_pred hhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 00 0 011345566777888999999999999999999998888888777666
Q ss_pred HhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHH
Q 016515 278 LVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFE 357 (388)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~ 357 (388)
+.+..+....+++.++..++..+.++..+.+++|++|++.|++++|+++..+++|++++|++.+.+.+. +...++++++
T Consensus 642 ~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a 720 (742)
T TIGR01299 642 LSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFAS 720 (742)
T ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHH
Confidence 554333222223233333444455677888999999999999999999999999999999998876654 3456777788
Q ss_pred HHHHHHHHHhhcccccccCcch
Q 016515 358 VVFVLAIASSLLFPFETMGREL 379 (388)
Q Consensus 358 ~~~~~~~~~~~~~~pet~~~~l 379 (388)
++.++++++.+++ |||+++.|
T Consensus 721 ~~lll~~ll~~~L-PET~~~~l 741 (742)
T TIGR01299 721 AALACGGLLALKL-PDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHhC-CCCccccc
Confidence 8777777766654 89999865
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=6.8e-38 Score=304.82 Aligned_cols=351 Identities=24% Similarity=0.352 Sum_probs=230.5
Q ss_pred hhhhhhhhhcCcc------HHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 016515 3 TSVAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM 75 (388)
Q Consensus 3 ~~i~~~l~~~~~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~ 75 (388)
..+++++++++++ +++++++|+++|++.|+. +....|+.|++|+++||+..++.+.++.+|.++++.++..+.
T Consensus 96 ~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~ 175 (502)
T TIGR00887 96 MIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777776 789999999999999986 677889999999999999999999999999999888765542
Q ss_pred c-----------------------ccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChH-HHHHHHHHHHHhcCCC
Q 016515 76 T-----------------------RLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTV-DAHRILEKMAFVNQTK 131 (388)
Q Consensus 76 ~-----------------------~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~-~a~~~l~~~~~~~~~~ 131 (388)
. .++||++|.++++|+++.++.++++||||+|+..|+|.| ++++.+++..+.+.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~ 255 (502)
T TIGR00887 176 AGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEA 255 (502)
T ss_pred HHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcccccc
Confidence 1 258999999999999988888899999999999998875 4666666654321110
Q ss_pred CCCCccccchhhhhhhhchhhhccccccccccccccccccchhhhhhcc----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016515 132 LPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS----RKLIRTTLLLWVLFFANVFSYYGAVLL 207 (388)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (388)
. . + +.++.+ ++ ++. ...+++++++ ++.++..+.++..++.+.+.+|+...+
T Consensus 256 ~-----~---~-~~~~~~----~~----------~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 310 (502)
T TIGR00887 256 E-----P---D-EVEKAS----TA----------VEV--PKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLN 310 (502)
T ss_pred C-----c---c-cccchh----cc----------ccc--hhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 0 0 0 000000 00 000 0012444443 223333444455566666677775544
Q ss_pred hhhhcCCCCCCCCcccccCCCCCc-------hhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh
Q 016515 208 TSKLSSGDNKCGSKVLHADKSKDN-------SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF 280 (388)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~ 280 (388)
.+.+...... . ....... .......+..++.+++.+++++++||+|||+.++.+..+.+++...+..
T Consensus 311 ~p~i~~~~G~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~ 384 (502)
T TIGR00887 311 QKVILSAIGY---S---PPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF 384 (502)
T ss_pred cHHHHHHHcC---C---CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 4333211100 0 0000000 0011233444566788999999999999999888777665554433332
Q ss_pred h--c--hhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhccc---------
Q 016515 281 H--Q--SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC--------- 347 (388)
Q Consensus 281 ~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~--------- 347 (388)
. . .........+...++..+..+..|.+++|++|++.|+++.|+++.+++++++++|++.+++.+..
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 464 (502)
T TIGR00887 385 AYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTG 464 (502)
T ss_pred HHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccc
Confidence 1 1 11111111111222334555678889999999999999999999999999999999998877632
Q ss_pred -chhHHHHHHHHHHHHHHHHhhcccccccCcchhhhHHh
Q 016515 348 -HLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDA 385 (388)
Q Consensus 348 -~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~~~~~ 385 (388)
+...++++++++++++.+.. ++.|||++|++||+.+|
T Consensus 465 ~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 465 IWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSGE 502 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhCC
Confidence 22346777888888776654 55699999999887554
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.4e-35 Score=286.63 Aligned_cols=335 Identities=34% Similarity=0.612 Sum_probs=247.6
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
.++++++++++++++.++++|++.|++.|+. +....++.|++|+++|++..++.+.++.+|.++++.+++.+. +||
T Consensus 167 ~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr 243 (505)
T TIGR00898 167 TAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWR 243 (505)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHH
Confidence 4677888899999999999999999999985 677889999999999999999999999999999988877653 499
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
+.|++.++|.++..+..+++||||+|+..++|.+|+++.+++.++.|+.+.++. ..+.+.++ +.
T Consensus 244 ~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~------~~~~~~~~----~~------ 307 (505)
T TIGR00898 244 WLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAE------VLSLSLEK----DL------ 307 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHH------HHhhhhhh----hh------
Confidence 999999999888777778899999999999999999999999988776533211 00000000 00
Q ss_pred ccccccccccchhhhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIA 240 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
. +++....++++++ ++.++..+..+..++...+.||+...+.+.+. .+.+.+..+.
T Consensus 308 ---~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 364 (505)
T TIGR00898 308 ---S--SSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLG------------------GNIYLDLFIS 364 (505)
T ss_pred ---h--hccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccC------------------CChHHHHHHH
Confidence 0 0000123445554 45555555666677777777777655443221 1234556677
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-h-hHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-S-AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
++..+++.++.+++.||+|||+.+..+.++.+++.+.+.... . .+......+...++..+.++..+.+.+|++|++.|
T Consensus 365 ~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 444 (505)
T TIGR00898 365 GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVR 444 (505)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHH
Confidence 888899999999999999999999888777666655544322 2 12223333333444445566778899999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhh
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDT 382 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~~ 382 (388)
+++.|+.+.++++|++++|++.+ + +..+...++.+++++.+++.+..++ .|||++++++|.
T Consensus 445 ~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~~~~l~~t 505 (505)
T TIGR00898 445 NLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPETKGVPLPET 505 (505)
T ss_pred hhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCCCCCCCCCC
Confidence 99999999999999999999887 3 3334566778888888887776655 589999999873
No 6
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-33 Score=273.93 Aligned_cols=349 Identities=20% Similarity=0.318 Sum_probs=243.0
Q ss_pred hhhhhhhhhhcCccHHHHHHHHHHhhccCcchh-hHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 016515 2 VTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVP-VFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR-LN 79 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~-~~ 79 (388)
+..++.+++++++|+++++++|+++|+|.|+.. ....|++|.+|++.||...+..+..+.+|.+++..++...... ++
T Consensus 128 ~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~ 207 (513)
T KOG0254|consen 128 LFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAG 207 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCcc
Confidence 457899999999999999999999999999864 5678999999999999999999999999999986665554322 58
Q ss_pred hHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccc
Q 016515 80 WRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLS 159 (388)
Q Consensus 80 WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (388)
||.++.+..+|+++..+..+++||||+||.++||.+|+++.++++...++.+ .+.+.++.+..... +
T Consensus 208 Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~---------~~~~~~~~~~~~~~----~ 274 (513)
T KOG0254|consen 208 WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPED---------VEVELELLKIKLLV----E 274 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcc---------hHHHHHHHHHHHHH----h
Confidence 9999999999999887778889999999999999999999999986633111 01111111100000 0
Q ss_pred ccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHH------HHHHHHHHhhhhcCCCCCCCCcccccCCCCCchh
Q 016515 160 MTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVF------SYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSL 233 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (388)
... ......+++++.++.+++..+...+...+.+ .||...++.. . ...+..
T Consensus 275 ----~~~--~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~---------------g~~~~~- 331 (513)
T KOG0254|consen 275 ----AEV--AEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-A---------------GLKSDT- 331 (513)
T ss_pred ----hhc--ccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-c---------------CCCCch-
Confidence 000 0000124445555566666554443333222 2333333221 0 011111
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh----h-c----h---hHHHHHHH-HHHHHhhhc
Q 016515 234 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF----H-Q----S---AVVTTVLL-FGVRMCVTG 300 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~----~-~----~---~~~~~~~~-~~~~~~~~~ 300 (388)
....++.++..+++++++.+++||+|||+.++.+.....++.+.+.. . . . .+...... .....+..+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g 411 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG 411 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcc
Confidence 34456667778889999999999999999999888776665554432 1 1 0 11222222 222344456
Q ss_pred ccceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHH-HhhcccccccCcch
Q 016515 301 TITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA-SSLLFPFETMGREL 379 (388)
Q Consensus 301 ~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~pet~~~~l 379 (388)
..+++|.+.+|+||.++|+++.+++..++++.++......+.+....+....+.+|...+.+..+ .+++..||||++++
T Consensus 412 ~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 412 WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 77889999999999999999999999999999888776666555443224567777777777777 78888999999999
Q ss_pred hhhHHhh
Q 016515 380 KDTVDAI 386 (388)
Q Consensus 380 ~~~~~~~ 386 (388)
||+.+..
T Consensus 492 eei~~~~ 498 (513)
T KOG0254|consen 492 EEINELF 498 (513)
T ss_pred HHHHHHH
Confidence 9988754
No 7
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.7e-40 Score=318.07 Aligned_cols=347 Identities=27% Similarity=0.462 Sum_probs=237.9
Q ss_pred hhhhhhhhhhcCc---cHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 016515 2 VTSVAGLLSSFSP---NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT- 76 (388)
Q Consensus 2 ~~~i~~~l~~~~~---~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~- 76 (388)
+..+++++.++++ |++.+.++|+++|++.|+. +....|+.|.+|+++||+..++.+.++.+|.+++..++.....
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3467889999999 9999999999999999986 5677899999999999999999999999999998877765533
Q ss_pred --ccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhc
Q 016515 77 --RLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRD 154 (388)
Q Consensus 77 --~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (388)
.++||..+.++++|+++..+.+.++||||+||.+|||.|||++.++++++.+..+. +.+++.+..++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~-----------~~~~~~~~~~~ 233 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDE-----------EIEEIKAEKKE 233 (451)
T ss_pred cccccccccccccccccccccccccccccccceecccccccccccccccccccccccc-----------ccccccccccc
Confidence 24699999999999988888888999999999999999999999988543211110 00000000000
Q ss_pred cccccccccccccccccchhhhhhcch-hHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcCCCCCCCCcccccCCCCCch
Q 016515 155 THMLSMTRKITDKLKSGFSSFFMLFSR-KLIRTTLLLWVLFFANVFSY-YGAVLLTSKLSSGDNKCGSKVLHADKSKDNS 232 (388)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (388)
. ++.+ ..+++++++ +++++......+.....+.. +....+.+.+.... ..+. .
T Consensus 234 ~----------~~~~---~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~----------~~~~--~ 288 (451)
T PF00083_consen 234 S----------QESK---ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENA----------GISN--S 288 (451)
T ss_pred c----------cccc---eeeeecccccccccccccccccccccccccccccccccccccccc----------cccc--c
Confidence 0 0000 234445543 22333333333332222221 22222222221110 0011 1
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---h--hch----hHHHHHHHHHH-HHhhhccc
Q 016515 233 LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F--HQS----AVVTTVLLFGV-RMCVTGTI 302 (388)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~--~~~----~~~~~~~~~~~-~~~~~~~~ 302 (388)
+....+.++..+++.+++.+++||+|||++++.+..+++++.+.+. . ... ......+.... ..+..+..
T Consensus 289 -~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~ 367 (451)
T PF00083_consen 289 -FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWG 367 (451)
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccc
Confidence 1223444566678888889999999999988888776665554442 1 111 11111111111 12223556
Q ss_pred ceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhh
Q 016515 303 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDT 382 (388)
Q Consensus 303 ~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~~ 382 (388)
+..+.+.+|+||+++|+++.|+++.+++++++++|.+.+.+.+..+....+.+++++++++.+++++++|||+||++||+
T Consensus 368 ~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei 447 (451)
T PF00083_consen 368 PLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEI 447 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHH
Confidence 77889999999999999999999999999999999888776666554567888899999998999999999999999999
Q ss_pred HHh
Q 016515 383 VDA 385 (388)
Q Consensus 383 ~~~ 385 (388)
.++
T Consensus 448 ~~~ 450 (451)
T PF00083_consen 448 QEM 450 (451)
T ss_pred Hhh
Confidence 875
No 8
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=4.5e-33 Score=272.42 Aligned_cols=347 Identities=29% Similarity=0.438 Sum_probs=254.7
Q ss_pred hhhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 016515 2 VTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNW 80 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~W 80 (388)
+..++++++++++|++.+++.|+++|++.++. .+...+++|+.++++|+....+....+..|.+..+..+++. .+|
T Consensus 157 ~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~---~~W 233 (521)
T KOG0255|consen 157 LFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYIT---RDW 233 (521)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHH---hhH
Confidence 45788899999999999999999999998875 56778899999999999999995566665655555555554 399
Q ss_pred HHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 81 RWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 81 R~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
|+.+++..+|.++.++++++.||||||+..+||.||+++.++++++.|+++...... .+.....+ ..
T Consensus 234 r~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~-----~~~~~~~~---~~----- 300 (521)
T KOG0255|consen 234 RWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKEL-----LRLELLLR---PL----- 300 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHH-----HHHHHHhh---Hh-----
Confidence 999999999999887777778899999999999999999999999988544322110 01000000 00
Q ss_pred cccccccccccchhhhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 161 TRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
......+...+.++++ ++.++.++.+++.++...+.||+..+....+. .+.+.+..+
T Consensus 301 ----~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg------------------~~~~~~~~~ 358 (521)
T KOG0255|consen 301 ----KLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLG------------------GNIYLNFTL 358 (521)
T ss_pred ----hhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcC------------------chHHHHHHH
Confidence 0000011122444554 44777788888888888899998877655332 345667777
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hc-hh-HHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQ-SA-VVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.+....++....+...|+.|||.....+.+...++.+.... .. .. +..........++....+.+.+.+.+|++|+.
T Consensus 359 ~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~ 438 (521)
T KOG0255|consen 359 SGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTV 438 (521)
T ss_pred HHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 77788999999999999999999999888877766655543 21 21 12333333444555555566799999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhhHHhhh
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDAIE 387 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~~~~~~~ 387 (388)
+|+++.+.++.++++++.++|++...... ........+++....+..+++.++.|||++++++|..+|.|
T Consensus 439 ~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 439 VRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 99999999999999999999987653333 22233344467777777777767789999999999888877
No 9
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.98 E-value=9.3e-30 Score=246.77 Aligned_cols=332 Identities=18% Similarity=0.240 Sum_probs=209.2
Q ss_pred HHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh--------cccchHHHHHH
Q 016515 16 YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM--------TRLNWRWLLAF 86 (388)
Q Consensus 16 ~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~--------~~~~WR~~f~~ 86 (388)
+..++++|+++|++.|+. +....++.|++|+++||++.++.+.+..+|.++++.++..+. ..++||++|++
T Consensus 120 ~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~ 199 (479)
T PRK10077 120 VPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFAS 199 (479)
T ss_pred HHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHH
Confidence 567899999999999986 677889999999999999999999999999998877665442 35699999999
Q ss_pred hhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccc
Q 016515 87 SSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITD 166 (388)
Q Consensus 87 ~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
.+++.++..+..+++||||+|+..++|.|++.+.++++...++ .+...++..+..++
T Consensus 200 ~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~------------ 256 (479)
T PRK10077 200 EAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL-----------ATQALQEIKHSLDH------------ 256 (479)
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh-----------HHHHHHHHHHHHHH------------
Confidence 9988887777778899999999989998888776665422100 00000000000000
Q ss_pred cccccchhhhhhcchhHHHHHHHH--HHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhh
Q 016515 167 KLKSGFSSFFMLFSRKLIRTTLLL--WVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAE 244 (388)
Q Consensus 167 ~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (388)
++. ..+..+. ........ ....+.+...++....+.+.+.... ..+. ..........++..
T Consensus 257 -~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~----------g~~~-~~~~~~~~~~~~~~ 319 (479)
T PRK10077 257 -GRK---TGGKLLM--FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTL----------GAST-DIALLQTIIVGVIN 319 (479)
T ss_pred -hhh---hhhhhcc--hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHc----------CCCC-chHHHHHHHHHHHH
Confidence 000 0000111 00001111 0111111111222222222221100 0011 11123344556777
Q ss_pred hHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--h-ch-hHHHHHHHHHHHH-hhhcccceeeeecccccccchhh
Q 016515 245 LPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--H-QS-AVVTTVLLFGVRM-CVTGTITVATIYAPEIYPTSART 319 (388)
Q Consensus 245 ~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~El~p~~~R~ 319 (388)
+++.+++++++||+|||+.++.+..+..+..+.+.. . .. ............. +.....+..+.+.+|++|++.|+
T Consensus 320 ~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 399 (479)
T PRK10077 320 LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRG 399 (479)
T ss_pred HHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHH
Confidence 889999999999999999998877766555444322 1 11 1111111111111 11222356788999999999999
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhh------cccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhhHHhhh
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLV------TSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDAIE 387 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~~~~~~~ 387 (388)
++.|+++.++++++++++++.+.+. +..+....++++++.++++.++.+++.|||++|++||..++.+
T Consensus 400 ~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 473 (479)
T PRK10077 400 KALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWE 473 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHh
Confidence 9999999999999999887776543 2334455677788888888888888889999999988766543
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.98 E-value=2.9e-30 Score=250.50 Aligned_cols=321 Identities=18% Similarity=0.235 Sum_probs=199.6
Q ss_pred hhhhhhhhhhcCccHHH--------HHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHH
Q 016515 2 VTSVAGLLSSFSPNYVS--------LVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAW 72 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~--------l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~ 72 (388)
+.++++++++++||+++ ++++|+++|++.|+. +....++.|++|+++||+..++.+.+..+|.++++.+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999975 899999999999986 677889999999999999999999888888888876654
Q ss_pred HHh--------cccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhh
Q 016515 73 VVM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIK 144 (388)
Q Consensus 73 ~~~--------~~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 144 (388)
.+. ..+|||++|+++++++++.++++..+||||+|...+++.++.. ++ ..
T Consensus 176 ~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~-----------~~----------~~- 233 (490)
T PRK10642 176 LISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD-----------RE----------GL- 233 (490)
T ss_pred HHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc-----------cc----------cc-
Confidence 332 3689999999988777766777788999999865432221100 00 00
Q ss_pred hhhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCCCCCCccc
Q 016515 145 ENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLS-SGDNKCGSKVL 223 (388)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 223 (388)
.+ .++ ..+++++++ .++.....+...+...+.+|+...+.+.+. ...
T Consensus 234 -~~-------------------~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-------- 281 (490)
T PRK10642 234 -QD-------------------GPK---VSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNL-------- 281 (490)
T ss_pred -cc-------------------ccc---CCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 00 000 012223332 223333333333444455555544443322 110
Q ss_pred ccCCCCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-Hh-hh-chhHHHHHHHHHHHHhhhc
Q 016515 224 HADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP-LV-FH-QSAVVTTVLLFGVRMCVTG 300 (388)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~ 300 (388)
+ .+. ...........++.+++.++.+++.||+|||+.+..+.++..+.... +. .. ..........+...++...
T Consensus 282 g--~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 358 (490)
T PRK10642 282 H--YSE-DHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNC 358 (490)
T ss_pred C--CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 0 011 11112233445666788889999999999999887665533322222 11 11 1111111111222222222
Q ss_pred ccceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHhhcccccccCcch
Q 016515 301 TITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFPFETMGREL 379 (388)
Q Consensus 301 ~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l 379 (388)
..+....+.+|++|++.|+++.|+.+.++++++.++|++.+++.+..+ ...+.++..+.++++.+..++ .|||+++.+
T Consensus 359 ~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~pes~~~~~ 437 (490)
T PRK10642 359 FTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT-MKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH-hccccCCCC
Confidence 334456678899999999999999999999999999999988776533 233444455555666555554 589987655
Q ss_pred h
Q 016515 380 K 380 (388)
Q Consensus 380 ~ 380 (388)
+
T Consensus 438 ~ 438 (490)
T PRK10642 438 K 438 (490)
T ss_pred C
Confidence 4
No 11
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.3e-31 Score=239.88 Aligned_cols=354 Identities=23% Similarity=0.319 Sum_probs=239.7
Q ss_pred hhhhhhhhhhcCcc-------HHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 2 VTSVAGLLSSFSPN-------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 2 ~~~i~~~l~~~~~~-------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
+..+++++++++.+ ..+|.+.|++.|+|.|+. |...+..+|.+-.++||...+.+...+..|++.+..++.+
T Consensus 123 ImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 123 IMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred HHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHH
Confidence 44567777776532 567999999999999996 6677788999999999999988888888888888777665
Q ss_pred Hhc-------c--------cchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhc-cChHHHHHHHHHHHHhcCCCCCCCcc
Q 016515 74 VMT-------R--------LNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAK-ARTVDAHRILEKMAFVNQTKLPPGIL 137 (388)
Q Consensus 74 ~~~-------~--------~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~-~~~~~a~~~l~~~~~~~~~~~~~~~~ 137 (388)
+.. . .=||..|.++.+|+++.++.|+.+|||++|-..+ +|.+.|- .+..++.+.
T Consensus 203 v~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~-------~d~~k~~~~--- 272 (538)
T KOG0252|consen 203 VSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA-------GDMKKVLSV--- 272 (538)
T ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh-------hcccccccc---
Confidence 421 1 1399999999999999999999999999997432 3333332 111111111
Q ss_pred ccchhhhhhhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCC
Q 016515 138 VSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNK 217 (388)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (388)
+.++++.. +.. ....+.....+..+|.+.+-+..+.....||...+.+|+..++.+.+.+....
T Consensus 273 ------~~~~~~~~-------~~~---~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~ 336 (538)
T KOG0252|consen 273 ------DIEAESTA-------ESD---VPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGV 336 (538)
T ss_pred ------ccchhhcc-------ccC---CCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhcc
Confidence 00000000 000 00001111112223322244555555667888888888888777655431111
Q ss_pred CCCcccccCCCCCc----hhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch---hH--HHH
Q 016515 218 CGSKVLHADKSKDN----SLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS---AV--VTT 288 (388)
Q Consensus 218 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~---~~--~~~ 288 (388)
... .+... ....+.++.....+||..+..+++|++|||+..+.++++..++.+.+....+ .. ..+
T Consensus 337 ~~~------~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v 410 (538)
T KOG0252|consen 337 IPS------ANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVV 410 (538)
T ss_pred CCC------cchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceee
Confidence 000 00000 1123455666677889999999999999999999999888887777664322 11 112
Q ss_pred HHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc-----ccchhHHHHHHHHHHHHH
Q 016515 289 VLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT-----SCHLRLAVILFEVVFVLA 363 (388)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~-----~~~~~~~~~i~~~~~~~~ 363 (388)
...+...++..|.......+++|.||+++|+++.|++.+.|..|++++.+.+.++.+ ..+....+++++.++++.
T Consensus 411 ~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~g 490 (538)
T KOG0252|consen 411 LYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLG 490 (538)
T ss_pred hHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHh
Confidence 223333455567777889999999999999999999999999999999988888777 455566788888888888
Q ss_pred HHHhhcccccccCcchhhhHHhhhC
Q 016515 364 IASSLLFPFETMGRELKDTVDAIES 388 (388)
Q Consensus 364 ~~~~~~~~pet~~~~l~~~~~~~~~ 388 (388)
.+..+++ |||++|++||+.+|.|+
T Consensus 491 i~~T~l~-pEtk~~~leei~~e~~~ 514 (538)
T KOG0252|consen 491 ILFTLLI-PETKGKSLEEISNEEES 514 (538)
T ss_pred HheeEEe-ecccccCHHHhcChhhc
Confidence 7766665 69999999999877763
No 12
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=2.4e-27 Score=226.91 Aligned_cols=309 Identities=17% Similarity=0.191 Sum_probs=190.7
Q ss_pred hhhhhhhhhcCccHH--------HHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 3 TSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
.++++++++++++++ .++++|+++|++.|+. +....++.|+.|+++||+..+..+.++.+|.+++..+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~ 183 (438)
T PRK09952 104 MGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSL 183 (438)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999987 5899999999999986 6677899999999999999999999999999988776554
Q ss_pred Hh--------cccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhh
Q 016515 74 VM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKE 145 (388)
Q Consensus 74 ~~--------~~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 145 (388)
+. ..++||++|++.+++.++..+++...||||+|...+++.+++ + .
T Consensus 184 l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~-------------~---~---------- 237 (438)
T PRK09952 184 ISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA-------------K---K---------- 237 (438)
T ss_pred HHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc-------------c---c----------
Confidence 43 358999999999998877777777899999875432211000 0 0
Q ss_pred hhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCCCCCcccc
Q 016515 146 NEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLSSGDNKCGSKVLH 224 (388)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 224 (388)
+. + ..+.+++.+ +.........+...+.+|....+.+ .+.... +
T Consensus 238 -~~----------------------~--~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~--------g 282 (438)
T PRK09952 238 -RI----------------------P--VIEALLRHP--GAFLKIIALRLCELLTMYIVTAFALNYSTQNL--------G 282 (438)
T ss_pred -cC----------------------C--HHHHHHHch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------C
Confidence 00 0 000011111 1111112222333334443332222 121110 0
Q ss_pred cCCCCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh---hchhHHH-HHHHHHHHHhhhc
Q 016515 225 ADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVT-TVLLFGVRMCVTG 300 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~ 300 (388)
. + .........+.++..+++..+.|+++||+|||+.++.+..+..++.+.+.. ..+.... ....+...++...
T Consensus 283 ~--s-~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 359 (438)
T PRK09952 283 L--P-RELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDM 359 (438)
T ss_pred C--C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 0 1 011111223345556778889999999999999887766554443332221 1111111 1112221222223
Q ss_pred ccceeeeecccccccchhhHHHHHHHHHHh-HhHhHHHHHHHHhhccc-c-hhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 301 TITVATIYAPEIYPTSARTTGFGVASSLGK-VGGMVCPLVAVGLVTSC-H-LRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 301 ~~~~~~~~~~El~p~~~R~~~~~~~~~~~~-i~~~~~p~~~~~~~~~~-~-~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
..+..+.+.+|++|+++|+++.|+.+.+++ +++.++|++.+.+.+.. + ...++....++.+++.+..+. .+||++
T Consensus 360 ~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~-~~~~~~ 437 (438)
T PRK09952 360 VVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL-MKDNQR 437 (438)
T ss_pred HHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH-cccccc
Confidence 345567889999999999999999998876 78999999999887743 2 233444455556666555554 467653
No 13
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=3.5e-27 Score=228.05 Aligned_cols=350 Identities=20% Similarity=0.306 Sum_probs=214.3
Q ss_pred hhhhhhhhc---CccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHH---HHHhc
Q 016515 4 SVAGLLSSF---SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLA---WVVMT 76 (388)
Q Consensus 4 ~i~~~l~~~---~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~---~~~~~ 76 (388)
+++++++++ ..+++.++++|+++|++.|.. +....++.|++|+++|++..+..+.+..+|..+++.++ .....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 191 (481)
T TIGR00879 112 VIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN 191 (481)
T ss_pred HHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 344555533 345668999999999999875 56678999999999999999999999999999999988 44446
Q ss_pred ccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccc
Q 016515 77 RLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTH 156 (388)
Q Consensus 77 ~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (388)
..+||+.|++.+++.++..+..+++||+|+++..+++.+++++.+++....+. ++. ...+..+..+...+
T Consensus 192 ~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~-- 261 (481)
T TIGR00879 192 TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSG---EDK-----ELLDELELIDIKRS-- 261 (481)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCC---CcH-----HHHHHHHHHHHHHH--
Confidence 77999999998777777777778899999999888887776665544322111 000 00000000000000
Q ss_pred cccccccccccccccchhhhhhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHH
Q 016515 157 MLSMTRKITDKLKSGFSSFFMLFSRKLIRTTL-LLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYV 235 (388)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (388)
.. .+..+..+......+++ ..+... ...+.++.....+.....+.+.+.... +. +. .....
T Consensus 262 ---~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~--~~-~~~~~ 323 (481)
T TIGR00879 262 ---IE---KRSVQPSWGSLFSSTRR-IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENA--------GV--ST-DHAFL 323 (481)
T ss_pred ---HH---HhhccccHHHHHhcCch-hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHc--------CC--Cc-hHHHH
Confidence 00 00000111111211111 112222 222222222111111111222111100 00 11 11122
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---h-hch------hHHHHHH-HHHHHHhhhcccce
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F-HQS------AVVTTVL-LFGVRMCVTGTITV 304 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~-~~~------~~~~~~~-~~~~~~~~~~~~~~ 304 (388)
...+..+..+++.++.+++.||+|||+.+..+..+..++.+.+. . ... ....... ......+..+..+.
T Consensus 324 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (481)
T TIGR00879 324 VSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPV 403 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCe
Confidence 34455667788999999999999999988777655544433332 1 111 1111111 11122222333456
Q ss_pred eeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchhh
Q 016515 305 ATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKD 381 (388)
Q Consensus 305 ~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~ 381 (388)
.+.+.+|.+|++.|+++.|+.+.+.+++++++|.+.+.+.+..+....+++++++++++.++.+++.||+++++++|
T Consensus 404 ~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 404 PWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred ehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 67788999999999999999999999999999999888777655556677788888888888888889999888765
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=1.2e-25 Score=215.01 Aligned_cols=304 Identities=19% Similarity=0.256 Sum_probs=180.0
Q ss_pred hhhhhhhhhcCccHH--------HHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 3 TSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
.+++++++++++++. .++++|+++|++.|+. +...+++.|+.|+++||+..+..+.+...|.++++.+...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 103 MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788899999875 5999999999999986 6778899999999999999998888888888887765443
Q ss_pred Hh--------cccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhh
Q 016515 74 VM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKE 145 (388)
Q Consensus 74 ~~--------~~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 145 (388)
+. +.+|||++|+++++++++.++++..+||||++..++ . ++
T Consensus 183 ~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~---------------~--~~-------------- 231 (432)
T PRK10406 183 LQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA---------------L--KE-------------- 231 (432)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh---------------h--cc--------------
Confidence 32 268999999999999888777788899998641100 0 00
Q ss_pred hhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCCCCCCCcccc
Q 016515 146 NEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKL-SSGDNKCGSKVLH 224 (388)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 224 (388)
+ ..++++++. ++.........+.....+|+...+.+.+ .+.. +
T Consensus 232 -----------------------~---~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~--------g 275 (432)
T PRK10406 232 -----------------------A---GSLKGLWRN--RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTA--------G 275 (432)
T ss_pred -----------------------c---ccHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------C
Confidence 0 011122221 1111122222222334445444443322 1110 0
Q ss_pred cCCCCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh--hh-c-hhHHHHHHHHHHHHhhhc
Q 016515 225 ADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV--FH-Q-SAVVTTVLLFGVRMCVTG 300 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~~~~~~~ 300 (388)
.+ .........+..+...++..+.|+++||+|||+.++.+..+..+...++. .. . +......+.....++...
T Consensus 276 --~s-~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (432)
T PRK10406 276 --MH-ANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSF 352 (432)
T ss_pred --CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 01 01111112233444566677889999999999877665544333322221 11 1 111111111111111111
Q ss_pred ccceeeeecccccccchhhHHHHHHHHHHhH-hHhHHHHHHHHhhcccchhH-HHHHHHHHHHHHHHHhhcccccccCcc
Q 016515 301 TITVATIYAPEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVTSCHLRL-AVILFEVVFVLAIASSLLFPFETMGRE 378 (388)
Q Consensus 301 ~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i-~~~~~p~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~pet~~~~ 378 (388)
..+..+.+.+|+||+++|+++.|++++++++ .+...|++.+.+ +..+.+. .++..++..+++.+..++ .++++|+
T Consensus 353 ~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~--l~~~~~~ 429 (432)
T PRK10406 353 YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM--LHRKGKG 429 (432)
T ss_pred HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH--hhhcccc
Confidence 2234567889999999999999999999885 344578877754 4334333 334344555555555454 3566665
Q ss_pred h
Q 016515 379 L 379 (388)
Q Consensus 379 l 379 (388)
.
T Consensus 430 ~ 430 (432)
T PRK10406 430 M 430 (432)
T ss_pred c
Confidence 4
No 15
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.94 E-value=1.3e-24 Score=202.48 Aligned_cols=283 Identities=16% Similarity=0.114 Sum_probs=181.2
Q ss_pred ccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHHH
Q 016515 14 PNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA 93 (388)
Q Consensus 14 ~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l~ 93 (388)
+++++++++|+++|++.|..+.....++|+.|+++|+++.++.+.+..+|.+++++++..+.+.+|||+.|++.++++++
T Consensus 77 ~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~ 156 (368)
T TIGR00903 77 FNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAA 156 (368)
T ss_pred ccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 79999999999999999865555566799999999999999999999999999999998888889999999997777655
Q ss_pred H-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccccc
Q 016515 94 L-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGF 172 (388)
Q Consensus 94 ~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (388)
. .+.++++||+|++. ++..+ . ++. .
T Consensus 157 ~~~~~~~~lp~~p~~~---~~~~~-------------------------~---~~~-----------------------~ 182 (368)
T TIGR00903 157 GIILVLAALPALPFQA---AEGFG-------------------------F---KDA-----------------------V 182 (368)
T ss_pred HHHHHHHHcCCCCCCC---CCCcc-------------------------h---HHH-----------------------H
Confidence 4 55667789999742 10000 0 000 0
Q ss_pred hhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHHHHH
Q 016515 173 SSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSA 252 (388)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
..++++++++. .+.++..++.....+|++..|.+.+..+.. .+.. ......+..+.+.+..+
T Consensus 183 ~~~~~ll~~~~---~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g----------~s~~-----~~~~~~l~~~~g~~g~~ 244 (368)
T TIGR00903 183 KEFGALAGRKD---LWIIGAILGFGVALFDNLAIWLEAALRPAG----------LEDI-----AGDAVALAILAGLIGVA 244 (368)
T ss_pred HHHHHHHcChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------CChH-----HHHHHHHHHHHHHHHHH
Confidence 01222333222 233334445555556666555544432110 0111 12223344455666678
Q ss_pred HHHHHhchh---HHHHH-HHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHH
Q 016515 253 IIVDKIGRK---LSMVL-MFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSL 328 (388)
Q Consensus 253 ~l~d~~gRr---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~ 328 (388)
++.||..|| +.... .....++....+....+......+.+...++....++..+.+.+|++|++.|+++.|+.+..
T Consensus 245 ~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~ 324 (368)
T TIGR00903 245 VIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFT 324 (368)
T ss_pred HhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHH
Confidence 888887653 33222 22222232222222222222222333333444445556778999999999999999999999
Q ss_pred HhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 329 GKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 329 ~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
++++++++|.+.+.+.. +....+.++++..+++.+.+.+.
T Consensus 325 g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~~~ 364 (368)
T TIGR00903 325 SRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIALLL 364 (368)
T ss_pred HHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999988876663 44556777888888887776543
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.93 E-value=1.7e-23 Score=199.88 Aligned_cols=318 Identities=19% Similarity=0.230 Sum_probs=188.9
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
.+++.++.+++++++.++++|+++|++.|.. +....++.|+.|+++|++..++.+.++.+|.++++.+...+.+..+||
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 3567778889999999999999999998875 566788999999999999999999999999999988877777778999
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
+.|++..++.++.+......||++++...+.+ + +.+ + ++.. +
T Consensus 173 ~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~--~------------~~~-~------------~~~~----~------- 214 (426)
T PRK12307 173 AAFFVGLLPVLLVIYIRARAPESKEWEEAKLS--G------------KGK-H------------SQSA----W------- 214 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChHHHHhhhh--c------------ccc-c------------cccc----h-------
Confidence 99998776666555555567888765321100 0 000 0 0000 0
Q ss_pred ccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIAS 241 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (388)
+.....++.+++++..+....+....+.....++....+.+.+..+.. .+ .........+..
T Consensus 215 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------~~-~~~~~~~~~~~~ 276 (426)
T PRK12307 215 -------SVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEG----------FD-TGVVSNLMTAAA 276 (426)
T ss_pred -------hhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CC-HHHHHHHHHHHH
Confidence 000012233343333222222222212111111111111121111100 01 011112234456
Q ss_pred hhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hchhHH-HHHHHHHHHHhhhcccceeeeecccccccchhh
Q 016515 242 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSAVV-TTVLLFGVRMCVTGTITVATIYAPEIYPTSART 319 (388)
Q Consensus 242 ~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 319 (388)
++.+++.++.+++.||+|||+....+..++.+..+.+.. ...... .....+...+...+..+..+.+..|.+|++.|+
T Consensus 277 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 356 (426)
T PRK12307 277 FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRG 356 (426)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHh
Confidence 677889999999999999999888776665544433322 222211 111222222222233344556789999999999
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHH-HHHHHHHHHHHHHHhhcccccccC
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLA-VILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
++.|+.+.++++++.++|.+.+.+.+..+.... +++....+..+.....+..||+.+
T Consensus 357 ~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (426)
T PRK12307 357 LGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDRLK 414 (426)
T ss_pred hhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhccccCChhhh
Confidence 999999999999999999999888776653322 222333333333333333456543
No 17
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=5.9e-23 Score=194.93 Aligned_cols=302 Identities=23% Similarity=0.313 Sum_probs=187.3
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++.+++++++.+++.|+++|++.|.. +....++.|++|+++|++..++.+....+|..+++.++....+..+||+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK11551 91 GLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRH 170 (406)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHH
Confidence 455677788999999999999999998875 5667889999999999999999999999999999988877777889999
Q ss_pred HHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 83 LLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 83 ~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
.|++.++..++. .....++||+|++...+++.++. ++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------------------~~~------------- 209 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR----------------------------APV------------- 209 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh----------------------------hhh-------------
Confidence 998877655544 44556689998754221110000 000
Q ss_pred ccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIAS 241 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (388)
.+..++++..+.....+..++.....++....+.+.+..+.+ . + ...........+
T Consensus 210 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g--------~--s-~~~~~~~~~~~~ 265 (406)
T PRK11551 210 -------------LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQG--------L--S-RSQAGLVQIAFN 265 (406)
T ss_pred -------------HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------C--C-hhhhhHHHHHHH
Confidence 000011111111112222222222223322222222211110 0 1 011112234456
Q ss_pred hhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHH
Q 016515 242 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTG 321 (388)
Q Consensus 242 ~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~ 321 (388)
++.+++.++.+++.||+|||+.+..+.....+..+.+....+.+......+...++..+..+..+.+.+|.+|++.|+++
T Consensus 266 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~ 345 (406)
T PRK11551 266 IGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTG 345 (406)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhh
Confidence 67889999999999999999988765554444433333322222222222222233334445667789999999999999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHhhcccchh-HHHHHHHHHHHHHHHHhhcc
Q 016515 322 FGVASSLGKVGGMVCPLVAVGLVTSCHLR-LAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 322 ~~~~~~~~~i~~~~~p~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 370 (388)
.|+.+.++++++.++|.+.+.+.+..+.. ..+.....+.+++.+..++.
T Consensus 346 ~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 346 VGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887754333 23333444444555544444
No 18
>PRK15075 citrate-proton symporter; Provisional
Probab=99.92 E-value=5.6e-23 Score=196.70 Aligned_cols=280 Identities=19% Similarity=0.248 Sum_probs=164.9
Q ss_pred hhhhhhhhhcCccHH--------HHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 3 TSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
.++++++++++++++ .++++|+++|++.|.. +....++.|++|+++||+..++.+....+|..+++.++..
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788899999987 4799999999999875 5667899999999999999999988888888777776655
Q ss_pred H--------hcccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhh
Q 016515 74 V--------MTRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKE 145 (388)
Q Consensus 74 ~--------~~~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 145 (388)
+ .+.+|||++|+++.++..+..+.+...||++++...+++ +
T Consensus 176 l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----------------~-------------- 224 (434)
T PRK15075 176 LNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR-----------------P-------------- 224 (434)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc-----------------c--------------
Confidence 4 246899999998766544444455556666543211000 0
Q ss_pred hhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCccccc
Q 016515 146 NEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHA 225 (388)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (388)
+.+ ..++... +.++.........+.....++....+.+.+.++. .+
T Consensus 225 -~~~-----------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-------~g- 270 (434)
T PRK15075 225 -SMR-----------------------EIFRSLA--ANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-------LH- 270 (434)
T ss_pred -ccc-----------------------cHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cC-
Confidence 000 0000000 1111111111222223333333333333221100 00
Q ss_pred CCCCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH---hhhchhH-HHHHHHHHHHHhhhcc
Q 016515 226 DKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL---VFHQSAV-VTTVLLFGVRMCVTGT 301 (388)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~ 301 (388)
.+.+ .......+..++.+++.++.|++.||+|||+..+.+.....+..... ....... ..........++....
T Consensus 271 -~~~~-~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 348 (434)
T PRK15075 271 -LSAA-DSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSY 348 (434)
T ss_pred -CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 0111 11222344566678889999999999999998776544433222111 1111111 1111111111222222
Q ss_pred cceeeeecccccccchhhHHHHHHHHHHhH-hHhHHHHHHHHhhcccch
Q 016515 302 ITVATIYAPEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVTSCHL 349 (388)
Q Consensus 302 ~~~~~~~~~El~p~~~R~~~~~~~~~~~~i-~~~~~p~~~~~~~~~~~~ 349 (388)
.+..+.+.+|.+|++.|+++.++.+++++. ++.++|.+.+.+.+..+.
T Consensus 349 ~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 349 NGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 234456789999999999999999888875 588899999888776553
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.92 E-value=1.5e-22 Score=192.22 Aligned_cols=303 Identities=17% Similarity=0.214 Sum_probs=177.2
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-----
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT----- 76 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~----- 76 (388)
.+++++++++++|++++++.|+++|++.|.. +....++.|++|+++||+..++.+.+..+|..++++++..+..
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 4677888899999999999999999999976 6667789999999999999999999999999999998776642
Q ss_pred -ccchHHHHHHhhHHHHHH-HHHHhcCCCCch---HHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchh
Q 016515 77 -RLNWRWLLAFSSVPSFAL-LLFYGLAPESPR---YLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNL 151 (388)
Q Consensus 77 -~~~WR~~f~~~~i~~l~~-~~~~~~~pESp~---~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (388)
..|||+.|.+.++++++. .+.++++||+|+ |+.. ++.+...++.++ ++.+.++ .+ ++.
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~----~~~~~~~~~~~~-~~~~~~~------~~---~~~--- 225 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDE----EDKKALKEMIDN-DQLTLEQ------PE---GAF--- 225 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCH----HHHHHHHHHHHh-ccccccc------cc---ccc---
Confidence 469999999998887765 445677899995 3221 111111111110 0000000 00 000
Q ss_pred hhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCc
Q 016515 152 LRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDN 231 (388)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (388)
.++.......++.+++++. +.....+++....+++...+.+.+.++.. . + .+ ..
T Consensus 226 -------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-~-----~--~s-~~ 279 (412)
T TIGR02332 226 -------------AHAAMPQRSMLREIFTPAI----MLYTLAYFCLTNTLSAINIWTPQILQSFN-Q-----G--SS-NI 279 (412)
T ss_pred -------------ccccccHHHHHHHhcChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-----C--Cc-HH
Confidence 0000000012333333332 22222333333444444333333321100 0 0 00 01
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHH-HHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecc
Q 016515 232 SLYVDVFIASLAELPGLILSAIIVDKIGRKLSM-VLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAP 310 (388)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
..........++.++|.++.+++.||++||+.. ........+.+.......+............++.....+..+....
T Consensus 280 ~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 359 (412)
T TIGR02332 280 MIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPD 359 (412)
T ss_pred HhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcc
Confidence 111224455667888999999999999977643 3332222222211111212111111111111111122233456668
Q ss_pred cccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc
Q 016515 311 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 348 (388)
Q Consensus 311 El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~ 348 (388)
|.+|++.|+++.|+.+.++++|+.++|.+.+.+.+..+
T Consensus 360 ~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 360 QSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred cccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 89999999999999999999999999999988777654
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=2.1e-22 Score=190.76 Aligned_cols=301 Identities=22% Similarity=0.293 Sum_probs=181.4
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc--
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN-- 79 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~-- 79 (388)
.++++++.+++++++.+++.|+++|++.+.. +...+++.|++|+++|++..++.+....+|..+++.++..+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3567778889999999999999999998875 6677889999999999999999999999999999988877765555
Q ss_pred hHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccc
Q 016515 80 WRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLS 159 (388)
Q Consensus 80 WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (388)
||+.|.+.+++.++..+....+||+|++...+++.++..+..++..+ .+ + ..+ ++. +
T Consensus 167 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~--------~~~-~~~----~------ 223 (405)
T TIGR00891 167 WRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYG---GE-H--------RIA-NIV----M------ 223 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhc---cc-h--------hhh-hhh----h------
Confidence 99999998888777777777889998775432221111111111100 00 0 000 000 0
Q ss_pred ccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHH-HHhhhhcCCCCCCCCcccccCCCCCchhHHHHH
Q 016515 160 MTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAV-LLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVF 238 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (388)
......+... ++.+.....+........+..+... +....+.... + .+ .........
T Consensus 224 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g--~s-~~~~~~~~~ 281 (405)
T TIGR00891 224 ----------TLAAAMVQSA-GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADL--------G--LS-PHTVANIVV 281 (405)
T ss_pred ----------hhhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHh--------C--CC-HHHHHHHHH
Confidence 0000000000 0111111111111111111111111 1111111000 0 01 011112234
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH-hhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL-VFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
...++.+++.++.+++.||+|||+.+..+...+.+..+.. ....+.+......+...++..+..+..+.+.+|.+|++.
T Consensus 282 ~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
T TIGR00891 282 FSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ 361 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch
Confidence 4566778999999999999999998877665543332222 222222222222222223334445566678899999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 348 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~ 348 (388)
|+++.|+.+.++.+++.++|.+.+.+.+..+
T Consensus 362 ~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 362 RAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999888655
No 21
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.9e-23 Score=187.96 Aligned_cols=318 Identities=21% Similarity=0.323 Sum_probs=210.4
Q ss_pred hhhhhhhhhhcCccHHHHHHHHHHhhccCcc-hhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHH--HHHhccc
Q 016515 2 VTSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLA--WVVMTRL 78 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~--~~~~~~~ 78 (388)
.+.+.+++.+++++...+.++-+++|+.-|. .|.....+..|+|+++||+..++.+++..+|..+.+++. ..+..+.
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 5678899999999999999999999998875 477778999999999999999999999999999999888 6667777
Q ss_pred chHHHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccc
Q 016515 79 NWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHM 157 (388)
Q Consensus 79 ~WR~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (388)
+||..|++.++.++++ ++.++.++|+|+ +.| .|+. .+.+.|+.+.. ++
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pq---s~G-------------------LP~i-----e~~~~d~~e~~-~~--- 231 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQ---SEG-------------------LPPI-----EEYRGDPLEIY-EE--- 231 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCcc---ccC-------------------CCCH-----HHhhcCchhhh-hh---
Confidence 9999999999888765 566777899996 111 1110 00000000000 00
Q ss_pred ccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHH---HHHHHHhhhhcCCCCCCCCcccccCCCCCchhH
Q 016515 158 LSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSY---YGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLY 234 (388)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (388)
++++.+++.++.++ ++..+.-.+|++.+++.+.| |++.-|.+....+.. +. +. .+.-
T Consensus 232 --------~~~~~~ls~~~i~~--~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k-------~~--s~-~~a~ 291 (448)
T COG2271 232 --------EKENEGLTAWQIFV--KYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVK-------GF--SL-VKAN 291 (448)
T ss_pred --------hccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhc-------CC--CH-HHHH
Confidence 00011122222221 12222234566667777766 455555543332211 11 11 1111
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHh--chhHHHHHHHHHHH-HHHHHHhhhc--hhHHHHHHHHHHHHhhhcccceeeeec
Q 016515 235 VDVFIASLAELPGLILSAIIVDKI--GRKLSMVLMFVSAC-IFLLPLVFHQ--SAVVTTVLLFGVRMCVTGTITVATIYA 309 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~d~~--gRr~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (388)
....+.=.++++|++++|+++||+ |||..+.+.+++.. +++....... +.....++++...+++.|.--+....+
T Consensus 292 ~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a 371 (448)
T COG2271 292 WAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAA 371 (448)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 223344567899999999999996 77776654433333 3333333322 235555666666676666655677789
Q ss_pred ccccccchhhHHHHHHHHHHhH-hHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 310 PEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 310 ~El~p~~~R~~~~~~~~~~~~i-~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
.|..|.+..|++.|+...++.+ |+..+....+++.|..+..+.+.++.+.++++.+.....
T Consensus 372 ~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 372 AEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 888888877877777676777777777766666555443
No 22
>TIGR00895 2A0115 benzoate transport.
Probab=99.91 E-value=5.5e-22 Score=187.29 Aligned_cols=303 Identities=26% Similarity=0.362 Sum_probs=188.8
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++.+++++++.+++.|++.|++.|.. +...+++.|+.|+++|++..+..+....+|..+++.++..+.+..+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 172 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRS 172 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccccee
Confidence 456667788899999999999999998875 6777899999999999999999999999999999999888888889999
Q ss_pred HHHHhhHHH-HHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 83 LLAFSSVPS-FALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 83 ~f~~~~i~~-l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
.|++.++.. +...+...++||+|++...+ +.+++.+..+++...+.++.++ +..+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~------------ 230 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS---------ALPEQK------------ 230 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc---------cccccc------------
Confidence 999886444 44455667789999887655 4455555555443322111000 000000
Q ss_pred ccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIAS 241 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (388)
.+.+......+.+++++..+....++...+.....++....+.+.+....+ .+. ........+..
T Consensus 231 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----------~~~-~~~~~~~~~~~ 295 (398)
T TIGR00895 231 ----ATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELG----------FSL-SLAATGGALFN 295 (398)
T ss_pred ----cccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCH-HHHHHHHHHHH
Confidence 000000011222333333444444444444444444433333332221100 011 11112234456
Q ss_pred hhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHH
Q 016515 242 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTG 321 (388)
Q Consensus 242 ~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~ 321 (388)
++.+++.++.+++.||+|||+.............+......+........+...++.....+..+.+.+|.+|++.|+++
T Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 375 (398)
T TIGR00895 296 FGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATG 375 (398)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 67789999999999999999554433333322222222122222222233333344444556677899999999999999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHh
Q 016515 322 FGVASSLGKVGGMVCPLVAVGL 343 (388)
Q Consensus 322 ~~~~~~~~~i~~~~~p~~~~~~ 343 (388)
.|+.+.++.+|+.++|.+.+.+
T Consensus 376 ~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 376 VGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999887753
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.90 E-value=4.4e-22 Score=190.47 Aligned_cols=325 Identities=13% Similarity=0.132 Sum_probs=187.2
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
.+++.++.+++++++.+++.|++.|++.|.. +....++.|++|+++||+..++.+....+|..+++.+...+.+.++||
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 3567778888999999999999999988864 666788999999999999999999999999999999888887888999
Q ss_pred HHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 82 WLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 82 ~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
+.|++.+++.++. ++..+++||+|++.....+.++. + + ..+.+++. +
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-------------~--------~-~~~~~~~~----~------ 225 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR-------------H--------D-ALELAQQQ----E------ 225 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc-------------c--------c-ccccchhc----c------
Confidence 9999988776654 44456689988642100000000 0 0 00000000 0
Q ss_pred cccccccccccchh-hh-hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCCCCCcccccCCCCCchhHHHH
Q 016515 161 TRKITDKLKSGFSS-FF-MLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLSSGDNKCGSKVLHADKSKDNSLYVDV 237 (388)
Q Consensus 161 ~~~~~~~~~~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (388)
+.+.+... ++ ..++.+ ....+....+...+.+++...+.+ .+.... +. +. .......
T Consensus 226 ------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--------g~--s~-~~a~~~~ 285 (434)
T PRK11663 226 ------GAGLSRKEILTKYVLLNP---YIWLLSFSYVLVYVVRAAINDWGNLYMSETL--------GV--DL-VTANSAV 285 (434)
T ss_pred ------ccCCChhhhHHHHHhcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------CC--CH-HHHHHHH
Confidence 00000000 00 011111 111111222222222333222222 221110 00 10 1111223
Q ss_pred HHHHhhhhHHHHHHHHHHHHh--chh-HHHHHHHH--HHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccc
Q 016515 238 FIASLAELPGLILSAIIVDKI--GRK-LSMVLMFV--SACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~--gRr-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 312 (388)
....++..++.++.|++.||+ +|| ........ ....+.+......+........+...++..+.......+.+|.
T Consensus 286 ~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 365 (434)
T PRK11663 286 SMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAEC 365 (434)
T ss_pred HHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhc
Confidence 344567789999999999998 333 32221111 1111111111111211211222222222222222334567899
Q ss_pred cccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcch
Q 016515 313 YPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGREL 379 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l 379 (388)
+|++.|+++.|+.+.++++|+.++|.+.+++.+..+....+...+++++++++..+...++.++++.
T Consensus 366 ~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (434)
T PRK11663 366 SHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPREA 432 (434)
T ss_pred ccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchhcc
Confidence 9999999999999999999999999999998887666666777777777777666655555555543
No 24
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.4e-21 Score=175.66 Aligned_cols=295 Identities=19% Similarity=0.260 Sum_probs=191.7
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..+++++++++|||+.++++|++.|++.|.. +....+..+.+|+++|+++.+....+.+++.+++.+++.++.+.+|||
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR 167 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWR 167 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHH
Confidence 4678999999999999999999999999986 567788899999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 82 WLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 82 ~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
..|++.+..+++. +..+..+| |+- + .+.++.
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP--~~~-----~----------------~~~~~~------------------------- 199 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP--PSE-----I----------------SGSLPG------------------------- 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--Ccc-----C----------------CCCCCc-------------------------
Confidence 9999998888775 45667788 320 0 000000
Q ss_pred cccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHH
Q 016515 161 TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIA 240 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
.......+++++.....++....+....+..| .+..+.+.+.. .-+........+..
T Consensus 200 ----------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~f--tYi~P~L~~v~-----------g~s~~~vs~~Ll~~ 256 (394)
T COG2814 200 ----------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALY--TYIRPFLESVA-----------GFSVSAVSLVLLAF 256 (394)
T ss_pred ----------chhHHHHHhcCchHHHHHHHHHHHHcchhhhH--HhHHHHHHHcc-----------CCCHhHHHHHHHHH
Confidence 00001112233322222222222322222222 22333332111 11112334556777
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hchhHHHHHHHHHHHHhhhcccceeeeecccccccchhh
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART 319 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 319 (388)
+++.++|++++|++.|| +.|+.+........+..+.+.+ .++.+......+...+.............++ .-++.+.
T Consensus 257 Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~ 334 (394)
T COG2814 257 GIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAAD 334 (394)
T ss_pred HHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchH
Confidence 88999999999999999 7777776665544444444433 2333333333333222221111122334555 5578899
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
.+.++....-++|..++..+.+.+.+..+.....+.-+.+.+++.++....
T Consensus 335 ~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 335 LAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988887665555555556666666555544
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.90 E-value=1.8e-21 Score=183.24 Aligned_cols=317 Identities=16% Similarity=0.187 Sum_probs=182.3
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
.+++.++.+++++++.++++|+++|++.|.. +....++.|++|+++|++..+..+....+|.++++.++..+.+..+||
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 148 (399)
T TIGR00893 69 WGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQ 148 (399)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCch
Confidence 3566777888999999999999999998875 667789999999999999999999999999999999988877888999
Q ss_pred HHHHHhhHHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 82 WLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
+.|.+.++..++..+ ..+..||+|+-- +...++.++...+ + ...+.+. +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~-----------~~~~~~~---~------- 198 (399)
T TIGR00893 149 WAFIIEGVLGIIWGVLWLKFIPDPPQKA--KWLTEEEKYIVVG-------G-----------LLAEQQG---K------- 198 (399)
T ss_pred HHHHHHHHHHHHHHHHhhheecCCCCcc--ccCCHHHHhhcch-------h-----------hcccccc---c-------
Confidence 999988887666544 445567766410 0001110000000 0 0000000 0
Q ss_pred cccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 161 TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
++.+......++.++++... ......+.....+.....+.+ .+.+.. + .+ .........+
T Consensus 199 -----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~~~~~~~~~~ 259 (399)
T TIGR00893 199 -----GPSTPKKYQIKELLKDRRVW---GLALGQFLVNIGLGFFLTWFPTYLVQER--------G--LS-ILEAGFMASL 259 (399)
T ss_pred -----cccCCCccchHHHhcCHHHH---HHHHHHHHHHhHHHHHHHHHHHHHHHHh--------c--cc-HHHhhHHHHH
Confidence 00000011222233222111 111112222222222221111 111100 0 00 0111122344
Q ss_pred HHhhhhHHHHHHHHHHHHhchhH--HHHHHHH--HHHH-HHH-HHhhh-chhHHHHHHHHHHHHhhhcccceeeeecccc
Q 016515 240 ASLAELPGLILSAIIVDKIGRKL--SMVLMFV--SACI-FLL-PLVFH-QSAVVTTVLLFGVRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~--~~~~~~~--~~~~-~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 312 (388)
..+..+++.++.+++.||+|||+ ....... .+.+ ..+ ..... .+.............+..+..+..+.+.+|.
T Consensus 260 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (399)
T TIGR00893 260 PGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDN 339 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhh
Confidence 56667889999999999999996 1111111 1101 111 11111 1111112222222222233456778899999
Q ss_pred cccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHhh
Q 016515 313 YPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSL 368 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~ 368 (388)
+|++.|+++.|+.+.+..+++.++|.+.+.+.+..+ ....+.+.+++.+++.+..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 340 APGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred cChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998887665 44555556666666555444
No 26
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.89 E-value=5.9e-21 Score=181.86 Aligned_cols=307 Identities=12% Similarity=0.041 Sum_probs=191.5
Q ss_pred CccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHH
Q 016515 13 SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPS 91 (388)
Q Consensus 13 ~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~ 91 (388)
.++++.+++.|+++|++.|.. +....++.|+.|+++|++..+..+....+|..+++.++..+....+||+.|++.++..
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~ 186 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGT 186 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 578899999999999987654 5566788999999999999999999999999999999888777789999999888777
Q ss_pred HHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccccccccccccc
Q 016515 92 FALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSG 171 (388)
Q Consensus 92 l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (388)
++..+....+||+|+.. +++ + ... ++.
T Consensus 187 ~~~~~~~~~l~~~~~~~--~~~-----------------~---------~~~--~~~----------------------- 213 (417)
T PRK10489 187 FITLLPLLRLPALPPPP--QPR-----------------E---------HPL--RSL----------------------- 213 (417)
T ss_pred HHHHHHHHhCCCCCCCC--ccc-----------------c---------cch--HHH-----------------------
Confidence 66666666778765310 000 0 000 000
Q ss_pred chhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHHHH
Q 016515 172 FSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILS 251 (388)
Q Consensus 172 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (388)
.+.++..++++..+...+...... . ..+...+.+.+..+ ..+. +. ...........++.+++.++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~p~~~~~-------~~g~--~~-~~~g~~~~~~~~g~~ig~~~~ 279 (417)
T PRK10489 214 LAGFRFLLASPVVGGIALLGGLLT---M-ASAVRVLYPALADE-------VWQM--GA-AQIGLLYAAVPLGAALGALTS 279 (417)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHH---H-HHhHHHhhHHHHHh-------ccCC--Ch-hHhHHHHHHHHHHHHHHHHHH
Confidence 001112222222222221111111 0 11111111111110 0000 10 111122234456678888999
Q ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhH
Q 016515 252 AIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKV 331 (388)
Q Consensus 252 ~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i 331 (388)
+++.||.++|+.+..+..+..+..+.+....+........+...++.....+..+.+..|..|++.|+++.|+.+....+
T Consensus 280 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 359 (417)
T PRK10489 280 GWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT 359 (417)
T ss_pred HHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh
Confidence 99999877777666665554444433333332222222222222222122234457889999999999999999999999
Q ss_pred hHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchhhhHHhh
Q 016515 332 GGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKDTVDAI 386 (388)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~~~~~~ 386 (388)
|..++|.+.+.+.+..+....+++++++.++..++.+...||++++++||+.+|-
T Consensus 360 g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 360 GDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred hHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 9999999999888876666667777777676666677777999999999988764
No 27
>PRK03545 putative arabinose transporter; Provisional
Probab=99.89 E-value=1.9e-20 Score=176.85 Aligned_cols=294 Identities=16% Similarity=0.127 Sum_probs=180.8
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++++++++++|+++++++|+++|++.+.. +...+++.|+.|+++|++..++.+....+|..++++++..+.+..|||
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 4567788889999999999999999998765 566788999999999999999999999999999999988877788999
Q ss_pred HHHHHhhHHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 82 WLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
+.|++.++..++..+ ....+||.|+ +.+ ++ .
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~----~~~-~~--------------------------~----------------- 195 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPS----EHS-GS--------------------------L----------------- 195 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC----CCc-ch--------------------------H-----------------
Confidence 999998887666533 3445676542 000 00 0
Q ss_pred cccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 161 TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGA-VLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
+..++.++++..+...... +.....++.. .+..+.+.+.. + .+. ........+
T Consensus 196 ------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~--------g--~s~-~~~~~~~~~ 249 (390)
T PRK03545 196 ------------KSLPLLFRRPALVSLYLLT---VVVVTAHFTAYSYIEPFVQQVA--------G--LSE-NFATLLLLL 249 (390)
T ss_pred ------------HHHHHHHhCcHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc--------C--CCc-cHHHHHHHH
Confidence 0001112122111111111 1111111111 11122221100 0 011 111122344
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhh
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART 319 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 319 (388)
.++..+++.++.+++.||.|||...+.................+........+...++.....+.......|..| +.|+
T Consensus 250 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~ 328 (390)
T PRK03545 250 FGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATD 328 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHH
Confidence 566778999999999999999876544333322222222222222222222222222222222333445667766 5889
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccc
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 371 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 371 (388)
++.|+.+...++|..++|.+.+.+.+..+....+...+++.+++.++.++..
T Consensus 329 ~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 329 VAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999988877766777777777777776666554
No 28
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=2.4e-21 Score=187.09 Aligned_cols=314 Identities=13% Similarity=0.089 Sum_probs=175.5
Q ss_pred hcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc---cchHHHHHH
Q 016515 11 SFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR---LNWRWLLAF 86 (388)
Q Consensus 11 ~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~---~~WR~~f~~ 86 (388)
+++++++.++++|+++|++.|.. +....++.||+|+++||++.++.+.+..+|.++++++....... .+||..|.+
T Consensus 117 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~ 196 (467)
T PRK09556 117 SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIF 196 (467)
T ss_pred cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHH
Confidence 34789999999999999988764 67778999999999999999999999999999988877554433 269999988
Q ss_pred hhHHHHHHH-HHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccccccc
Q 016515 87 SSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKIT 165 (388)
Q Consensus 87 ~~i~~l~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
.++++++.. +.+++.+|+|+.. +..++ ++.. ++.. . ++++..
T Consensus 197 ~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~~------~~~~----------~-~~~~~~---------------- 239 (467)
T PRK09556 197 PSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEIF------GEPI----------S-EEDKET---------------- 239 (467)
T ss_pred HHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhcc------cCcc----------c-hhhhcc----------------
Confidence 777766553 3445567777521 11000 0000 0000 0 000000
Q ss_pred ccccccc-hhh-hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCCCCCcccccCCCCCchhHHHHHHHHh
Q 016515 166 DKLKSGF-SSF-FMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLSSGDNKCGSKVLHADKSKDNSLYVDVFIASL 242 (388)
Q Consensus 166 ~~~~~~~-~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (388)
++++... ..+ +..++.+ ..+.+....+.....+++...+.+ .+.+.. +. + ............+
T Consensus 240 ~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~--------g~--s-~~~a~~~~~~~~~ 305 (467)
T PRK09556 240 ESTDMTKWQIFVEYVLKNP---VIWLLCFANIFLYIVRIGIDNWSPVYAFQEL--------GF--S-KEDAINTFTLFEI 305 (467)
T ss_pred ccccCcHHHHHHHHHHcCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------CC--C-HHHHHHHHHHHHH
Confidence 0000000 000 1111111 112222222333333334333333 222110 00 1 0111122334556
Q ss_pred hhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH--HhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 243 AELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP--LVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 243 ~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
+.+++.+++|+++||+|||+..+............ .....+........+...++..+.....+....|.+|++.|++
T Consensus 306 ~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~ 385 (467)
T PRK09556 306 GALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGV 385 (467)
T ss_pred HHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHH
Confidence 77899999999999999988765543332222111 1111222222122222222222222223356679999999999
Q ss_pred HHHHHHHHHhH-hHhHHHHHHHHhhc------------ccchhHHHHHHHHHHHHHHHHhhccc-cccc
Q 016515 321 GFGVASSLGKV-GGMVCPLVAVGLVT------------SCHLRLAVILFEVVFVLAIASSLLFP-FETM 375 (388)
Q Consensus 321 ~~~~~~~~~~i-~~~~~p~~~~~~~~------------~~~~~~~~~i~~~~~~~~~~~~~~~~-pet~ 375 (388)
+.|+.+.++++ |+.++|.+.+.+.+ ..+....+.++.++.+++.+..++.. .|++
T Consensus 386 a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 454 (467)
T PRK09556 386 ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVAVMEER 454 (467)
T ss_pred HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 66899999999888 33434455666666666655555432 4554
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.88 E-value=2.2e-20 Score=181.94 Aligned_cols=344 Identities=19% Similarity=0.254 Sum_probs=188.5
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++.+++++++.++++|++.|++.++. +....++.|+.|+++|++..+.....+.+|..+++.+...+.+.++||
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~ 174 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWR 174 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 3566777888999999999999999998875 566788999999999999999999999999999999988888889999
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
+.|++..++.++.++.....||++++...+++.++..+..+...+. +++ .. .......... ...
T Consensus 175 ~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~--~~~~~~~~~~---~~~ 238 (496)
T PRK03893 175 ALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRG-EHR----------II--NILLTLAAAA---ALW 238 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcc-hhH----------HH--HHHHHHHHHH---HHH
Confidence 9999877776666666677899887643322211111111000000 000 00 0000000000 000
Q ss_pred ccccccccccch-------------hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHH-HHhhhhcCCCCCCCCcccccCC
Q 016515 162 RKITDKLKSGFS-------------SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAV-LLTSKLSSGDNKCGSKVLHADK 227 (388)
Q Consensus 162 ~~~~~~~~~~~~-------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 227 (388)
.......+..+. ......+++.......+....+......+... +....+.... +.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~--------g~-- 308 (496)
T PRK03893 239 FCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDL--------GY-- 308 (496)
T ss_pred HHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhc--------CC--
Confidence 000000000000 00000000000000011111111111111111 1122221110 00
Q ss_pred CCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hchhH-HHHHHHHHHHHhhhccccee
Q 016515 228 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSAV-VTTVLLFGVRMCVTGTITVA 305 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 305 (388)
+ ............++.+++.++.+++.||+|||+.++.+..+..+..+.+.. ..... ......+.......+..+..
T Consensus 309 ~-~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (496)
T PRK03893 309 D-PHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLL 387 (496)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhh
Confidence 0 111122334456677889999999999999999887766554443333222 22221 11112222212222333455
Q ss_pred eeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHH-HHHHHHHhhccccc
Q 016515 306 TIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVV-FVLAIASSLLFPFE 373 (388)
Q Consensus 306 ~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~pe 373 (388)
..+..|.+|++.|+++.|+.+.++.+|+.++|.+.+.+.+..+....+...+++ .+++.+...+..|+
T Consensus 388 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (496)
T PRK03893 388 PKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVILLIGLDMPS 456 (496)
T ss_pred HHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 668899999999999999999999999999999999888776654444444433 33333333333343
No 30
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.87 E-value=3e-20 Score=175.11 Aligned_cols=280 Identities=22% Similarity=0.285 Sum_probs=167.9
Q ss_pred hhhhhhhhhcCccHH--------HHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 3 TSVAGLLSSFSPNYV--------SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~--------~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
..++.++.++++++. .++++|+++|++.|.. +....++.|+.|+++|++..+..+.+..+|.++++.+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~ 154 (394)
T TIGR00883 75 MGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLL 154 (394)
T ss_pred HHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888888876 4899999999998875 5667899999999999999999999999999998877654
Q ss_pred Hh--------cccchHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhh
Q 016515 74 VM--------TRLNWRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKE 145 (388)
Q Consensus 74 ~~--------~~~~WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 145 (388)
.. +.++||+.|.+.++..++..+.+...||+|++...+++ ++.+
T Consensus 155 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~------------ 206 (394)
T TIGR00883 155 LSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK----------------HKKK------------ 206 (394)
T ss_pred HHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc----------------cccc------------
Confidence 32 35799999998887776666666678888754211100 0000
Q ss_pred hhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCCCCCcccc
Q 016515 146 NEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLSSGDNKCGSKVLH 224 (388)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 224 (388)
+ ...++.++++. +.........+.....++....+.+ .+.+.. +
T Consensus 207 -----------------------~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g 251 (394)
T TIGR00883 207 -----------------------R---GPIRETLTKHR-KPFLLGLGLVIATTTTFYLITTYLPTYLTQTL--------G 251 (394)
T ss_pred -----------------------c---CCHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------C
Confidence 0 00111111111 1112222222222222222222222 111110 0
Q ss_pred cCCCCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHH-HHH-hh-h-chhHHHHHHHHHHHHhhhc
Q 016515 225 ADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFL-LPL-VF-H-QSAVVTTVLLFGVRMCVTG 300 (388)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~-~~~-~~-~-~~~~~~~~~~~~~~~~~~~ 300 (388)
.+ .........+..+...++.++.+++.||+|||+.+.....+..++. ... .. . .+.+..........++...
T Consensus 252 --~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 328 (394)
T TIGR00883 252 --LS-ANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGM 328 (394)
T ss_pred --CC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 01 1111122344556678888899999999999997765443333222 111 11 1 1222222222222222233
Q ss_pred ccceeeeecccccccchhhHHHHHHHHHH-hHhHhHHHHHHHHhhcccc
Q 016515 301 TITVATIYAPEIYPTSARTTGFGVASSLG-KVGGMVCPLVAVGLVTSCH 348 (388)
Q Consensus 301 ~~~~~~~~~~El~p~~~R~~~~~~~~~~~-~i~~~~~p~~~~~~~~~~~ 348 (388)
..+..+.+.+|.+|++.|+++.++.+.++ .+|+.++|.+.+.+.+..+
T Consensus 329 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 329 YTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 44566788999999999999999976665 4678899999988877655
No 31
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.86 E-value=1.4e-19 Score=169.46 Aligned_cols=292 Identities=16% Similarity=0.180 Sum_probs=174.7
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++.+++++++.++++|+++|++.|.. +....++.|+.| ++|++..+....+..+|..+++++.....+..+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 156 (377)
T TIGR00890 78 YGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVP 156 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHH
Confidence 4667788899999999999999999998865 455667888887 57999999999999999888777766666678999
Q ss_pred HHHHHhhHHHHHHHHH-HhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 82 WLLAFSSVPSFALLLF-YGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~-~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
+.|++.++..++..+. .++++|.|+- .+ +++. +. ++. +
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~---------------~~~~---------~~--~~~-----~------ 195 (377)
T TIGR00890 157 AAFIYMGIIFLLVIVLGAFLIGYPPGQ----LI---------------KTNI---------EV--SVK-----D------ 195 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHheecCchh----cc---------------ccCc---------cc--chh-----h------
Confidence 9999988877665443 4445554420 00 0000 00 000 0
Q ss_pred cccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 161 TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYY-GAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
...++.++++..... ....+...+... ......+... +. + .+ +........+
T Consensus 196 ------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~--------~--~~-~~~~~~~~~~ 248 (377)
T TIGR00890 196 ------------YTVWEMLRTPQFWVL---YLSFFLNAVSGLLLIGLYKPYGQ-SL--------G--LS-DGFLVLAVSI 248 (377)
T ss_pred ------------hhHHHHHcCccHHHH---HHHHHHHhHHHHHHHHHHHHHHH-Hc--------C--CC-HHHHHHHHHH
Confidence 001111221111111 111111111111 1111111111 00 0 01 1111222344
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch-h-HHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS-A-VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
..+..+++.++.+++.||+|||+.+..+..+..+..+.+..... . .......+...+......+....+.+|.+|++.
T Consensus 249 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~ 328 (377)
T TIGR00890 249 SSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN 328 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh
Confidence 56677889999999999999999887776665554444333221 1 111111122222222333455678899999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHH
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLA 363 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~ 363 (388)
|+++.|+.+....+|+.++|.+.+.+.+..+....+.+.+++.+++
T Consensus 329 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 329 SAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9999999999999999999999988877655455555555554443
No 32
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.86 E-value=1.4e-19 Score=174.93 Aligned_cols=314 Identities=14% Similarity=0.190 Sum_probs=174.0
Q ss_pred hhhhhhhhc--CccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 016515 4 SVAGLLSSF--SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR-LN 79 (388)
Q Consensus 4 ~i~~~l~~~--~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~-~~ 79 (388)
+++++++.+ .++++.+++.|+++|++.|.. +....++.|+.|+++|++..++...+..+|..+++++...+... .+
T Consensus 117 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g 196 (465)
T TIGR00894 117 SVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGG 196 (465)
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 444555433 356888999999999999975 67778999999999999999999999999999999998887777 49
Q ss_pred hHHHHHHhhHHHHHHHHHH-hcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccc
Q 016515 80 WRWLLAFSSVPSFALLLFY-GLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHML 158 (388)
Q Consensus 80 WR~~f~~~~i~~l~~~~~~-~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (388)
||+.|++.++++++..+.+ ...+|+|+.. .+.++.++ +.+.... +++
T Consensus 197 w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~--~~i~~~~------------------------~~~--- 244 (465)
T TIGR00894 197 WPMIFYVFGIVGCAWSLLWFVFPADDPSIH---PCISKFEK--KYINSSL------------------------QGQ--- 244 (465)
T ss_pred CCeehhhhhHHHHHHHHHHHHHhcCCcccC---CCCCHHHH--HHHHhhc------------------------ccc---
Confidence 9999999998887765544 4467888521 11111100 0000000 000
Q ss_pred cccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHH
Q 016515 159 SMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVF 238 (388)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (388)
+.+.+ ....++..++.+. ........+.....++....+.+.+..+ ..+. +. ........
T Consensus 245 ----~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lp~~l~~-------~~g~--s~-~~~g~~~~ 304 (465)
T TIGR00894 245 ----KGSTR---QSLPIKAIPKSLP---VWAIWFAIFGHFWLYTILPTYLPTFISW-------VLRV--SG-KENGLLSS 304 (465)
T ss_pred ----cCCCC---CCCCHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCc--Ch-HHhHHHHH
Confidence 00000 0012333333221 1122222333333333333232222110 0001 11 11112233
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHH--------HHHHHH--HHHHHHHHHhh-hchhHHHHHHHHHHHHhhhcccceeee
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLS--------MVLMFV--SACIFLLPLVF-HQSAVVTTVLLFGVRMCVTGTITVATI 307 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~--------~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
+..++..++.+++|++.||++||+. +..+.. +.+++.+.... .........++....++..+..+..+.
T Consensus 305 ~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 384 (465)
T TIGR00894 305 LPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLI 384 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhh
Confidence 4566778899999999999865421 111111 11111111111 112222222222222222222333445
Q ss_pred ecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhccc--c-hhHHHHHHHHHHHHHHHHhhcc
Q 016515 308 YAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC--H-LRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 308 ~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~--~-~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
...|..|. .++++.|+.+..+.++++++|.+.+.+.+.. + ....+.+.++..+++.++..+.
T Consensus 385 ~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 385 NSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred chhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 56677765 8999999999999999999999988776542 2 2344555666666666555443
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=3.4e-19 Score=171.44 Aligned_cols=322 Identities=14% Similarity=0.164 Sum_probs=170.1
Q ss_pred hhhhhhhhcC----ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHH-HHHHHHHHhcc
Q 016515 4 SVAGLLSSFS----PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIF-EASLAWVVMTR 77 (388)
Q Consensus 4 ~i~~~l~~~~----~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~-~~~l~~~~~~~ 77 (388)
+++.++.+++ .+++.++++|++.|++.|.. +.....+.|++|+++||+..++.+.+..+|..+ ++++.......
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 4445555554 47888999999999988764 556667889999999999999999988888644 44433333334
Q ss_pred cchHHHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccc
Q 016515 78 LNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTH 156 (388)
Q Consensus 78 ~~WR~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (388)
.+||+.|++.+++.++. .+..+++||+|+....+ +.+|.+ . +.+ +..+.++
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~-------~----~~~----------~~~~~~~------ 235 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLP-PIEEYK-------N----DYP----------DDYNEKH------ 235 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC-Chhhhh-------h----ccc----------ccccccc------
Confidence 59999999988776654 45567789988642111 000000 0 000 0000000
Q ss_pred cccccccccccccccchhh-hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCCCCCCCcccccCCCCCchhH
Q 016515 157 MLSMTRKITDKLKSGFSSF-FMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSK-LSSGDNKCGSKVLHADKSKDNSLY 234 (388)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (388)
++++.....+ +..++.+. .....+..+.....+++...+.+. +.+..+ .. ..+. .
T Consensus 236 ---------~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g--------~s-~~~~--~ 292 (452)
T PRK11273 236 ---------EQELTAKQIFMQYVLPNKL---LWYIAIANVFVYLLRYGILDWSPTYLKEVKH--------FA-LDKS--S 292 (452)
T ss_pred ---------CCCccHHHHHHHHHHcChH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CC-HHHH--H
Confidence 0000000000 11111111 111111212222222333322222 221100 00 0111 1
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHh--chhHHHHH-HHHHHHHHHHHHhh--hchhHHHHHHHHHHHHhhhcccceeeeec
Q 016515 235 VDVFIASLAELPGLILSAIIVDKI--GRKLSMVL-MFVSACIFLLPLVF--HQSAVVTTVLLFGVRMCVTGTITVATIYA 309 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~d~~--gRr~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (388)
....+..++.+++.++.|+++||+ |||..... ......+..+.+.. ...........+....+..+.......+.
T Consensus 293 ~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 372 (452)
T PRK11273 293 WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHA 372 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 123345566788999999999999 55543222 11111111111111 11111122222222222222222234567
Q ss_pred ccccccchhhHHHHHHHHHHhHhHhH-HHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc-cccccC
Q 016515 310 PEIYPTSARTTGFGVASSLGKVGGMV-CPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF-PFETMG 376 (388)
Q Consensus 310 ~El~p~~~R~~~~~~~~~~~~i~~~~-~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~pet~~ 376 (388)
.|.+|++.|+++.|+.+..+++|+.+ +|.+.+.+.+..+....+.+..++++++.+.+... .+|+|+
T Consensus 373 ~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 441 (452)
T PRK11273 373 LELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRH 441 (452)
T ss_pred HHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 89999999999999999999998765 79888888887665666666777666665555533 345443
No 34
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.85 E-value=6.8e-19 Score=166.27 Aligned_cols=302 Identities=13% Similarity=0.101 Sum_probs=182.7
Q ss_pred hhhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 016515 2 VTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR-LN 79 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~-~~ 79 (388)
+.+++++++++++|++.++++|+++|++.|.. +....++.|+.| ++|+++++....+...|..+++.++..+.+. .+
T Consensus 83 l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~ 161 (393)
T PRK09705 83 LIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSET 161 (393)
T ss_pred HHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 35778889999999999999999999998875 455667889887 7899999999998888999988887776655 48
Q ss_pred hHHHHHHhhHHHHHHHHHHhcCC-CCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccc
Q 016515 80 WRWLLAFSSVPSFALLLFYGLAP-ESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHML 158 (388)
Q Consensus 80 WR~~f~~~~i~~l~~~~~~~~~p-ESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (388)
||..+.+.+++.++....++... +.|+ + + + ++. .
T Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--------------~-~------------~~~-----~---- 196 (393)
T PRK09705 162 WYQTLAWWALPAVVALFAWWWQSAREVA---------S--------------S-H------------KTT-----T---- 196 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCc---------c--------------c-c------------CCC-----c----
Confidence 99988776666554433332211 1110 0 0 0 000 0
Q ss_pred cccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHH
Q 016515 159 SMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVF 238 (388)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (388)
.. .+.+++++.+ .+....+...+.+++...+.+.+..+.+ .+.+ .......
T Consensus 197 -----------~~---~~~l~~~~~~----~l~~~~~~~~~~~~~~~~~lp~~l~~~g----------~s~~-~ag~~~~ 247 (393)
T PRK09705 197 -----------TP---VRVVFTPRAW----TLGVYFGLINGGYASLIAWLPAFYIEIG----------ASAQ-YSGSLLA 247 (393)
T ss_pred -----------CC---cccccCHhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CChh-hhhHHHH
Confidence 00 0001112111 1111222222333333332222211110 0111 1112234
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh-hhchhHHHHHHHHHHHHhhhcccceeeeeccccc-ccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV-FHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIY-PTS 316 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~-p~~ 316 (388)
+..++.++|.++.+++.||.|||+....+..+..+....+. ...+..... .....+.....++.......+.+ |++
T Consensus 248 ~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~ 325 (393)
T PRK09705 248 LMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPA 325 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHH
Confidence 55677889999999999999999888776655444333322 222211111 11111222233344444555666 468
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccch-hHHHHHHHHHHHHHHHHhhcccccccCcchh
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL-RLAVILFEVVFVLAIASSLLFPFETMGRELK 380 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~ 380 (388)
.|+++.|+.+.++.+++.++|.+.+.+.+..+. ...+.+..+++++..++.+..+|||.+|..-
T Consensus 326 ~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK09705 326 IAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWV 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchhc
Confidence 899999999999999999999999998887553 3445555666677777777788999887654
No 35
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.85 E-value=6.2e-19 Score=166.99 Aligned_cols=287 Identities=12% Similarity=0.074 Sum_probs=172.3
Q ss_pred cHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHHH
Q 016515 15 NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA 93 (388)
Q Consensus 15 ~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l~ 93 (388)
+++.+++.|+++|++.+.. +....++.|+.|+++|++..+..+.....|.++++.++..+.+..+||..+++..+..++
T Consensus 111 ~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 111 SLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALL 190 (399)
T ss_pred HHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 5678999999999998875 566778899999999999999999999999999999988888889999998877665554
Q ss_pred HHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccccch
Q 016515 94 LLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFS 173 (388)
Q Consensus 94 ~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (388)
..+.....||++. + + ++ + .
T Consensus 191 ~~~~~~~~~~~~~----~-~-~~-------------------------~---~--------------------------- 209 (399)
T PRK05122 191 GLLLARPRPAVPP----V-K-GE-------------------------R---L--------------------------- 209 (399)
T ss_pred HHHHHhcCCCCCC----C-C-cc-------------------------c---h---------------------------
Confidence 4433333343221 0 0 00 0 0
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHHHHHH
Q 016515 174 SFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAI 253 (388)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (388)
++++.++ +.++....... ..+.+.....+.+....+.+ . . ... .......++.+++.++.++
T Consensus 210 ~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~--------~--~-~~~--~~~~~~~~~~~~~~~~~g~ 271 (399)
T PRK05122 210 PFRRVLG-RVWPYGMGLAL----ASIGFGTIATFITLYYAARG--------W--D-GAA--LALTLFGVAFVGARLLFGN 271 (399)
T ss_pred hHHHHHH-HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHcc--------c--c-cch--HHHHHHHHHHHHHHHHHHH
Confidence 0000000 00110000000 11111111111111100000 0 0 111 1223445667788899999
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHhH
Q 016515 254 IVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGG 333 (388)
Q Consensus 254 l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~ 333 (388)
+.||+|||+.+..+..+..+....+....+.+......+...++....++.......|.+|++.|+++.|+.+....+|+
T Consensus 272 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 272 LINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999988766655554444333333322222222222222222333334556789999999999999999999999
Q ss_pred hHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchhh
Q 016515 334 MVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELKD 381 (388)
Q Consensus 334 ~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~ 381 (388)
.++|.+.+.+.+..+....+.+.+++.+++.+..++. +++++|+.+|
T Consensus 352 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 398 (399)
T PRK05122 352 GITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL-YRRAPRAVPE 398 (399)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh-cccccccCCC
Confidence 8888888887776665566666667777776666554 5566665554
No 36
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.85 E-value=1.2e-18 Score=163.53 Aligned_cols=292 Identities=16% Similarity=0.177 Sum_probs=171.6
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhH--HHHHHHHHHHHHHHHHHHHHHHhcccch
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRW--MVALSAFWTAGTIFEASLAWVVMTRLNW 80 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~--~~~~~~~~~~G~~~~~~l~~~~~~~~~W 80 (388)
.++.++.+++++++.+++.|+++|.+.+.. |....+..|+.|++.|++. .+.......+|..++++++..+.+..+|
T Consensus 75 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~ 154 (375)
T TIGR00899 75 ALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGF 154 (375)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhccc
Confidence 345667788999999999999998776654 5666778899888877643 5677778889999999998888778899
Q ss_pred HHHHHHhhHHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccc
Q 016515 81 RWLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLS 159 (388)
Q Consensus 81 R~~f~~~~i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (388)
|+.|++.+++.++..+ .++++||+|+.... + + . + .+
T Consensus 155 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--------------~-~----------~-~~------------ 191 (375)
T TIGR00899 155 TVMFLTAALAFVLCGVLVWLFLPSYPRGAPG-----A--------------L-T----------R-LE------------ 191 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCccc-----c--------------c-C----------c-ch------------
Confidence 9999998887665544 45568987742100 0 0 0 0 00
Q ss_pred ccccccccccccchhhhhhc-chhHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHH
Q 016515 160 MTRKITDKLKSGFSSFFMLF-SRKLIRTTLLLWVLFFANVFS-YYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDV 237 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (388)
.+..+ +++.+.........+...... .+...+...... . + ........
T Consensus 192 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------------~--~-~~~~g~~~ 241 (375)
T TIGR00899 192 ---------------VRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELG------------L--P-DKLAGLMM 241 (375)
T ss_pred ---------------hhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcC------------C--C-HHHHHHHH
Confidence 00001 111111111111111111111 111111111110 0 0 01111112
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.......+++.++.+++.||+|||+.+..+..+..+.........+.+..........++.....+....+..|..|.+
T Consensus 242 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~- 320 (375)
T TIGR00899 242 GTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR- 320 (375)
T ss_pred HHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-
Confidence 2223445677888999999999999887766554444333333222222222222222222222344556778988875
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 369 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 369 (388)
|+++.++.+...++|+.++|.+.+.+.+..+....+.+.+++.+++.+...+
T Consensus 321 ~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 321 AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 5699999999999999999999998877665555666666666666655544
No 37
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.84 E-value=8.3e-19 Score=168.11 Aligned_cols=323 Identities=15% Similarity=0.157 Sum_probs=173.7
Q ss_pred hhhhhhhhcC----ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh-cc
Q 016515 4 SVAGLLSSFS----PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM-TR 77 (388)
Q Consensus 4 ~i~~~l~~~~----~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~-~~ 77 (388)
+++.++.+++ ++++.+.+.|++.|++.|.. +....++.|++|+++||+..++.+....+|..+++.+..... ..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 3444444443 56788899999999998865 556678899999999999999999999999988887655433 34
Q ss_pred cchHHHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccc
Q 016515 78 LNWRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTH 156 (388)
Q Consensus 78 ~~WR~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (388)
.+||..|++.++..++. ++.++++||+|+....+ +.++. ++ +.++ +...++ ++
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~---------~~--~~~~-------~~~~~~-----~~-- 235 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP-PIEEY---------RN--DYPD-------DYNEKA-----EQ-- 235 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC-Cchhc---------cc--cccc-------cccccc-----cc--
Confidence 69999999988876664 45566689988632100 00000 00 0000 000000 00
Q ss_pred cccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHH
Q 016515 157 MLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVD 236 (388)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (388)
+ .+.++. ..+..++.+... ......+.....+++...+.+.+..+. . + .+. ....+.
T Consensus 236 ------~--~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~l~~~--~-----g--~s~-~~~~~~ 292 (438)
T TIGR00712 236 ------E--LTAKEI--FMQYVLPNKLLW---YIAIANVFVYLLRYGVLDWSPTYLKEV--K-----H--FAL-DKSSWA 292 (438)
T ss_pred ------c--cchHHH--HHHHHccCchHH---HHHHHHHHHHHHHHHHHHhHHHHHHHc--c-----C--CCh-hhHHHH
Confidence 0 000000 001122211111 111111111122222222222221100 0 0 010 111122
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHH--H-HHHHHHhhh--chhHHHHHHHHHHHHhhhcccceeeeeccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSA--C-IFLLPLVFH--QSAVVTTVLLFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~--~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 311 (388)
..+..+..+++.++++++.||++||+....+.... . +..+.+... .+........+...+...+..........|
T Consensus 293 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 372 (438)
T TIGR00712 293 YFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALE 372 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 34456667889999999999996433222222111 1 111111111 111211122222222211211122345789
Q ss_pred ccccchhhHHHHHHHHHHhHhH-hHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 312 IYPTSARTTGFGVASSLGKVGG-MVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 312 l~p~~~R~~~~~~~~~~~~i~~-~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.+|++.|+++.|+.+.++++++ .++|.+.+.+.+..+....+.+..+..+++.+..++..||.|
T Consensus 373 ~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 373 LAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred hcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999876 578999998888666556666667767777777777777765
No 38
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.83 E-value=1.3e-18 Score=168.14 Aligned_cols=304 Identities=12% Similarity=0.035 Sum_probs=161.2
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH----hc--
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV----MT-- 76 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~----~~-- 76 (388)
.+++.+++++++++..+++.|+++|++.+.......++.|++|+++||+..++......+|..+++.+...+ ..
T Consensus 111 ~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 111 TAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 356677788899999999999999998876544445789999999999999998766666666654443222 11
Q ss_pred ---ccchHHHHHHhhHHHHHHHHHHhcCC-CCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhh
Q 016515 77 ---RLNWRWLLAFSSVPSFALLLFYGLAP-ESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLL 152 (388)
Q Consensus 77 ---~~~WR~~f~~~~i~~l~~~~~~~~~p-ESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (388)
..|||+.|++.+++.++..+..++++ +.|+ ++.++.+ + +. + .+
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~-------~-~~-~--------------~~----- 237 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELK-------K-SG-T--------------MP----- 237 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHH-------h-cC-c--------------cc-----
Confidence 25899999998888776554444443 4442 1100000 0 00 0 00
Q ss_pred hccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhcCCCCCCCCcccccCCCCCc
Q 016515 153 RDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLT-SKLSSGDNKCGSKVLHADKSKDN 231 (388)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (388)
+ +.....++..++.+ +.+.++..++......+....+. ..+.... + .+. .
T Consensus 238 -~--------------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--------g--~s~-~ 288 (476)
T PLN00028 238 -K--------------DSFSKVLRYGVTNY---RTWILALTYGYSFGVELTMDNIIAEYFYDRF--------G--LSL-E 288 (476)
T ss_pred -c--------------ccHHHHHHHHHcCc---hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhc--------C--CCH-H
Confidence 0 00000111111111 11222222222222222222221 2221100 0 010 1
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHHHhchhH-------HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccce
Q 016515 232 SLYVDVFIASLAELPGLILSAIIVDKIGRKL-------SMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITV 304 (388)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (388)
.......+.+++.+++.+++|+++||+|||+ .......+.++..+.+....+........+...++.....+.
T Consensus 289 ~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 368 (476)
T PLN00028 289 TAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGA 368 (476)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhh
Confidence 1122234456777889999999999998762 222222222222222222222222222222222222233345
Q ss_pred eeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 305 ATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 305 ~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
.+.+.+|+.| +.|+++.|+.+..+.+|+.++|++.. ..+..+....+.+.+++.+++.++.++.
T Consensus 369 ~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 369 TFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 6667777755 68999999999999999999887654 1122223445666666777766655544
No 39
>PRK03699 putative transporter; Provisional
Probab=99.83 E-value=2.3e-18 Score=162.74 Aligned_cols=305 Identities=13% Similarity=0.139 Sum_probs=178.2
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh-cccch
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM-TRLNW 80 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~-~~~~W 80 (388)
..++.++.+++++++.+++.|+++|++.|.. +....++.|+.|+++|++..+..+..+.+|..+++.+...+. +..+|
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 3566778888999999999999999998864 566778899999999999998888888888888887766554 46799
Q ss_pred HHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 81 RWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 81 R~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
|+.|.+.+++.++..++.++ .+.|+. .+.+ + ++. ++
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~-----------------~--------------~~~----~~------ 197 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLF-SEFPAL--GKHA-----------------P--------------KAD----KP------ 197 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCccc--cccC-----------------c--------------ccc----Cc------
Confidence 99999888776655443322 222310 0000 0 000 00
Q ss_pred cccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHH
Q 016515 161 TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIA 240 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
. .+. .+++ .........+.....+++...+.+.+.++. .+.. ..+... .....
T Consensus 198 -----~-~~~-------~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-------~g~s-~~~~~~--~~~~~ 250 (394)
T PRK03699 198 -----V-AKE-------KWGI----GVLFLAIAALLYILAQLTFISWVPEYAQKK-------FGMS-LEDAGN--LVSNF 250 (394)
T ss_pred -----c-ccc-------cCCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCC-hHHhhH--HHHHH
Confidence 0 000 0011 111122222222223333333322221100 0000 001111 12233
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
.++..+|.++.+++.||++||+.+.....+..+....+....+........+...++..+.++....+..|..|.+ +++
T Consensus 251 ~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~ 329 (394)
T PRK03699 251 WMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPK 329 (394)
T ss_pred HHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHH
Confidence 4567889999999999999999887665554443333333222222222222333333334455555667777644 678
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchh
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELK 380 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~ 380 (388)
..+.....+.+|+.++|.+.+.+.+..+....++...++.+++.+...+ .+++.+|.++
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 388 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL-LGFVSKHRQH 388 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 8899999999999999999998887766555666666666555544333 4566555444
No 40
>PRK12382 putative transporter; Provisional
Probab=99.82 E-value=8e-18 Score=159.00 Aligned_cols=277 Identities=16% Similarity=0.083 Sum_probs=167.7
Q ss_pred ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHH
Q 016515 14 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSF 92 (388)
Q Consensus 14 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l 92 (388)
++++.++++|+++|++.+.. +....++.|+.|+++|+++.+..+.+...|..++++++..+.+..+||..+.+..+..+
T Consensus 110 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 189 (392)
T PRK12382 110 FKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPL 189 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Confidence 57889999999999998864 55667889999999999999999999999999999998888788899998877655444
Q ss_pred HHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccccc
Q 016515 93 ALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGF 172 (388)
Q Consensus 93 ~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (388)
+.+......||.|. + + + ++ .+. +
T Consensus 190 ~~~~~~~~~~~~~~----~-~--~-------------~~--------------~~~----~------------------- 212 (392)
T PRK12382 190 LAWAFNGTVRKVPA----H-A--G-------------ER--------------PSL----W------------------- 212 (392)
T ss_pred HHHHHHHhccCCCC----C-c--c-------------cC--------------chH----H-------------------
Confidence 43333333344321 0 0 0 00 000 0
Q ss_pred hhhhhhcchhHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHHHH
Q 016515 173 SSFFMLFSRKLIRTTLLLWVLFFAN-VFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILS 251 (388)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (388)
+..+.++.+ ........... ....+... .+.+. + .+ +. .......+++.+++.++.
T Consensus 213 ~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~----~~~~~---------~--~~-~~--~~~~~~~~~~~~~~~~~~ 269 (392)
T PRK12382 213 SVVGLIWKP-----GLGLALQGVGFAVIGTFVSL----YFASK---------G--WA-MA--GFTLTAFGGAFVLMRVLF 269 (392)
T ss_pred HHHHHHHHh-----HHHHHHHHHHHhHHHHHHHH----HHHhc---------C--Cc-hh--HHHHHHHHHHHHHHHHHH
Confidence 000001111 11100000000 11111111 11100 0 00 11 112233455667888999
Q ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhH
Q 016515 252 AIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKV 331 (388)
Q Consensus 252 ~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i 331 (388)
+++.||+|||+.+..+..+..+..+.+....+.+..........++.....+.......|.+|++.|+++.|+.+....+
T Consensus 270 g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 349 (392)
T PRK12382 270 GWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI 349 (392)
T ss_pred HHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 99999999998887766555444443333322222222222222222222344455678899999999999999999999
Q ss_pred hHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 332 GGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 332 ~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
++.++|.+.+.+.+..+....+.+.+++.+++.+..++.
T Consensus 350 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 350 AYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999988887666666777777777766655544
No 41
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.82 E-value=1.1e-17 Score=162.04 Aligned_cols=298 Identities=16% Similarity=0.153 Sum_probs=177.0
Q ss_pred hhhhhhcC---ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-ccch
Q 016515 6 AGLLSSFS---PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT-RLNW 80 (388)
Q Consensus 6 ~~~l~~~~---~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~-~~~W 80 (388)
+....++. ++++.+.+.|++.|++.+.. +...++..|++|+++||+..++.+.++.+|.++++.+...+.+ .+||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 33444554 46888999999999987754 5667899999999999999999999999999999988888777 5799
Q ss_pred HHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccc
Q 016515 81 RWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSM 160 (388)
Q Consensus 81 R~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (388)
|..|++.++..++..+..++.||+|+.- +.++ ..+ +.
T Consensus 174 r~~f~i~a~l~ll~~l~~~~~~e~~~~~----~~~~-------------------------~~~-~~------------- 210 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLLAPEPTDTI----PVPK-------------------------TLE-QA------------- 210 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccc----cccc-------------------------chh-hh-------------
Confidence 9999998887777666666688876310 0000 000 00
Q ss_pred cccccccccccchhhhhhcchhHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHH-HH
Q 016515 161 TRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLF-FANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVD-VF 238 (388)
Q Consensus 161 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 238 (388)
....++++++++...........+ ...... .....+.+.... +. +. ...... ..
T Consensus 211 ----------~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~---~~~~~~~l~~~~--------G~--s~-~~~g~~~~~ 266 (491)
T PRK11010 211 ----------VVAPLRDFFGRNNAWLILLLIVLYKLGDAFA---MSLTTTFLIRGV--------GF--DA-GEVGLVNKT 266 (491)
T ss_pred ----------HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhc--------CC--CH-HHHHHHHHH
Confidence 000122223222111111111111 111111 111122211100 00 11 111111 12
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH---HhhhchhHHHHH-HHHHHHHhhhcccceeeeecccccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP---LVFHQSAVVTTV-LLFGVRMCVTGTITVATIYAPEIYP 314 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~El~p 314 (388)
...++.++|.+++|+++||+|||+.+..+.++.++..+. +....+...... ..+...++.....+..+.+..++.|
T Consensus 267 ~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~ 346 (491)
T PRK11010 267 LGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN 346 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334567899999999999999988766554433332221 112212221111 1111111111122345678889999
Q ss_pred cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 315 TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 315 ~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
++.+++..|+.+++..+|+.+++.+.+.+.+..+....+.+..++++++.+..++.
T Consensus 347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 347 KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888888888887665556666777777776666654
No 42
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.82 E-value=1.1e-17 Score=154.92 Aligned_cols=274 Identities=23% Similarity=0.345 Sum_probs=187.8
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++..++++++.+++.|++.|++.+.. +....++.|+.|+++|++..+..+....+|..+++.++..+.+..+||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 153 (352)
T cd06174 74 FALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWR 153 (352)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3456667777899999999999999999875 667789999999999999999999999999999999998888778899
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
+.+++.+++.++..+...+++ |++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~--~~~------------------------------------------------------ 177 (352)
T cd06174 154 WLFLILAILGLLLALLLLFLL--RLL------------------------------------------------------ 177 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHH------------------------------------------------------
Confidence 999998887766555443332 100
Q ss_pred ccccccccccchhhhhhcchhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFA-NVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIA 240 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
+............ .....+...+...... .++..........
T Consensus 178 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 220 (352)
T cd06174 178 ----------------------LLLALAFFLLSFGYYGLLTYLPLYLQEVLG---------------LSAAEAGLLLSLF 220 (352)
T ss_pred ----------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHhcC---------------CCHHHHHHHHHHH
Confidence 0000000000011 1111111111111000 0111122334556
Q ss_pred HhhhhHHHHHHHHHHHHhchhH-HHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhh
Q 016515 241 SLAELPGLILSAIIVDKIGRKL-SMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART 319 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 319 (388)
.+...++.++.+++.||+|||+ .+..+..+..+..+......+.+......+...++.....+....+..|..|++.|+
T Consensus 221 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T cd06174 221 GLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARG 300 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHH
Confidence 6778889999999999999999 887777666665554444333333333333333444455567788999999999999
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhc
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 369 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 369 (388)
+..|+.+...++++.++|.+.+.+.+..+....+.+.+++.+++.+..++
T Consensus 301 ~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 301 TASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999998877656566677777777777665543
No 43
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.82 E-value=4.4e-18 Score=158.72 Aligned_cols=277 Identities=15% Similarity=0.109 Sum_probs=168.5
Q ss_pred hhhhhhhhcCc-----cHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016515 4 SVAGLLSSFSP-----NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR 77 (388)
Q Consensus 4 ~i~~~l~~~~~-----~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~ 77 (388)
+++.++.++++ +++.++++|+++|++.+.. +...+++.|+.|+++|++..+..+....+|.++++.++..+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 154 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT 154 (365)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666 9999999999999998865 66778999999999999999999999999999999998888888
Q ss_pred cchHHHHHHhhHHHHHHHHHHhc--CCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcc
Q 016515 78 LNWRWLLAFSSVPSFALLLFYGL--APESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDT 155 (388)
Q Consensus 78 ~~WR~~f~~~~i~~l~~~~~~~~--~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (388)
.+||+.|++.++..++..+.... .||.++ +++ + + .+++..++
T Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~---------------~-----------~~~~~~~~----- 198 (365)
T TIGR00900 155 LGIKWAIWVDAVGFAISALLIVSVRIPELAA----SEI-Q---------------A-----------LSNAVLRD----- 198 (365)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccCCC----ccc-c---------------c-----------cchhHHHH-----
Confidence 89999999887766554433322 333221 000 0 0 00000000
Q ss_pred ccccccccccccccccchhhhhhcchhHHHHHHHHHHHH-HHHH-HH-HHHHHHHhhhhcCCCCCCCCcccccCCCCCch
Q 016515 156 HMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLF-FANV-FS-YYGAVLLTSKLSSGDNKCGSKVLHADKSKDNS 232 (388)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (388)
....++.+++++..+......... +... .. .+...+....+. .+ ...
T Consensus 199 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~ 248 (365)
T TIGR00900 199 ---------------TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLG--------------RG-STH 248 (365)
T ss_pred ---------------HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC--------------Cc-hHH
Confidence 000122233333222222211111 1111 11 111111111110 00 111
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHhhhcccceeeeeccc
Q 016515 233 LYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS-AVVTTVLLFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E 311 (388)
.........++.+++.++.+++.||.|||+.+..+..+.++.........+ .+......+...++.....+....+..|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 328 (365)
T TIGR00900 249 YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQR 328 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122234456667888999999999999999887766555554444433322 2222222222223333334556778999
Q ss_pred ccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 312 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 312 l~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
..|++.|+++.|+.+.+..+++.++|.+.+.+.+.
T Consensus 329 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 329 RVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877664
No 44
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.81 E-value=1.5e-18 Score=162.55 Aligned_cols=296 Identities=17% Similarity=0.244 Sum_probs=164.6
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHH-HHHHHhcccch
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEAS-LAWVVMTRLNW 80 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~-l~~~~~~~~~W 80 (388)
.+++.++.+++++++.++++|+++|++.|.. +...+++.|+.|+++|++..++.+....+|..++++ ++.......+|
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 70 CAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 4567778888999999999999999998875 677789999999999999999999999999999984 55556667899
Q ss_pred HHHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccc
Q 016515 81 RWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLS 159 (388)
Q Consensus 81 R~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (388)
|+.|++.++..++. .+...+.||+|+.. ++.++. +.++ .+.+.++++ +
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------~~~~------~~~~~~~~~----~----- 198 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLICFLLLRDSPQSC---GLPPAE-------------EMPN------EEPDGDAEK----K----- 198 (379)
T ss_pred hhHHHHHHHHHHHHHHHHheeeCCCcccc---ccCccc-------------cCcc------ccccccccc----c-----
Confidence 99998887766554 44556678877521 100000 0000 000000000 0
Q ss_pred ccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCCCCCcccccCCCCCchhHHHHH
Q 016515 160 MTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLSSGDNKCGSKVLHADKSKDNSLYVDVF 238 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (388)
+ ++.+......+.+++.+.... +.+..+.......+...+.+ .+.+.. + .+. ........
T Consensus 199 -~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g--~~~-~~~~~~~~ 259 (379)
T TIGR00881 199 -E----EELTKKQIFLQYVLLNKVLWY---ISLGYVFVYVVRTGILDWSPLYLTQEK--------G--FSK-EKASWAFT 259 (379)
T ss_pred -c----ccccchHHHHHHHHhcchHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHh--------C--CCH-HHHHHHHH
Confidence 0 000000011222222221111 11111111111111111111 111000 0 011 11112234
Q ss_pred HHHhhhhHHHHHHHHHHHHhc-hhHHHHH-HHHHHHHH-HHHHhh-hc-hhHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 239 IASLAELPGLILSAIIVDKIG-RKLSMVL-MFVSACIF-LLPLVF-HQ-SAVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~g-Rr~~~~~-~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
...+..+++.++.+++.||.+ ||+..+. ........ ...... .. +........+...++..+.....+.+..|.+
T Consensus 260 ~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 339 (379)
T TIGR00881 260 LYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELA 339 (379)
T ss_pred HHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc
Confidence 456677889999999999864 3332222 11111111 111111 11 1111112222222223333344567789999
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 348 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~ 348 (388)
|++.|+++.|+.+.++.+++.++|.+.+.+.+..+
T Consensus 340 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 340 PKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred CcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 99999999999999999999999999998877544
No 45
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.81 E-value=8.7e-18 Score=163.26 Aligned_cols=320 Identities=14% Similarity=0.168 Sum_probs=175.1
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..+++++++++++++.++++|+++|++.|.. +....++.|++|+++|++..++......+|..+++.++..+.+.++||
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 4667788889999999999999999998875 677789999999999999999999999999999999988888889999
Q ss_pred HHHHHhhHHHHHHH-HHHhcCCCCchHHHhccChHHHHHHHHHH-------HHhcCCCCCCCccccchhhhhhhhchhhh
Q 016515 82 WLLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKM-------AFVNQTKLPPGILVSDKAIKENEESNLLR 153 (388)
Q Consensus 82 ~~f~~~~i~~l~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (388)
+.|++.+.++++.. +..+..||+++ ..+++.|.....+... ....+++.. . ..+.............
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 231 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRDKP--AASENFDFLGLLLLSVGLGSLLYGLSEGPERG--W-FDSNEILILSITGLVA 231 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCccc--cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCC--C-CCchHHHHHHHHHHHH
Confidence 99999887766543 34455777543 1122222221111100 000000000 0 0000000000000000
Q ss_pred ccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchh
Q 016515 154 DTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSL 233 (388)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (388)
-. .....+ .+.+.+....+.+.+++.....+.. +...+.+++...+.+.+..+. .+ .+ ....
T Consensus 232 ~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~-------~g--~s-~~~~ 293 (485)
T TIGR00711 232 II--AFVVWE--LTDDNPLVDLRLFKYRNFTIGCVYM----SLLGLGLYGSFYLLPLYLQQV-------LG--YT-ALQA 293 (485)
T ss_pred HH--HHHHHH--HcCCCCccCHHHHcCCChHHHHHHH----HHHHHHHHHHHHHHHHHHHHh-------cC--CC-HHHH
Confidence 00 000000 0001111112222223322222111 112222222222222111000 00 01 1111
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh--h-hc-hhHHHHHHHHHHHHhhhcccceeeeec
Q 016515 234 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV--F-HQ-SAVVTTVLLFGVRMCVTGTITVATIYA 309 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (388)
........++.+++.++.+++.||+|||+.+..+..+..+....+. . .. +........+...++.....+......
T Consensus 294 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~ 373 (485)
T TIGR00711 294 GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIA 373 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223445667788999999999999999988777665554444333 1 11 112112222222222222222334455
Q ss_pred ccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 310 PEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 310 ~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
.|.+|++.|+++.|+.+.+..+|+.+++.+.+.+.+
T Consensus 374 ~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 374 LSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999999999999988877665
No 46
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.81 E-value=4.7e-17 Score=153.77 Aligned_cols=297 Identities=13% Similarity=0.148 Sum_probs=162.8
Q ss_pred hhhhhhhhcCccHHHHHHHH-HHhhccCcchhhHHHHHHhhcccCch--hhHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 016515 4 SVAGLLSSFSPNYVSLVIFR-CFVGVGLGGVPVFLAYFLEFVPVSHR--GRWMVALSAFWTAGTIFEASLAWVVMTRLNW 80 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R-~l~G~~~g~~~~~~~~~~E~~p~~~R--g~~~~~~~~~~~~G~~~~~~l~~~~~~~~~W 80 (388)
+++..+.+++++++++++.+ ++.|.+....+....+..|+.|++.| +...+..+....+|.+++++++..+.+..||
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw 172 (393)
T PRK15011 93 VLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSF 172 (393)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCh
Confidence 34455667888998876555 44555443345666777888877666 4556788888999999999999888878899
Q ss_pred HHHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccc
Q 016515 81 RWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLS 159 (388)
Q Consensus 81 R~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (388)
|..|+..++..++. ...+.++||+|+- +++ + + . +.+..
T Consensus 173 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~----------------~-~--------~~~~~----------- 211 (393)
T PRK15011 173 TVMYLSAAVAFIVCGVMVWLFLPSMRKE---LPL--A----------------T-G--------TLEAP----------- 211 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccCCC---Ccc--c----------------c-c--------ccccc-----------
Confidence 99999888776655 3445667886530 000 0 0 0 00000
Q ss_pred ccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 160 MTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
.++ .++.+.........+... .. +. ......+.+.. + .+. ........+
T Consensus 212 ------~~~-----------~~~~~~~~~~~~~~~~~~-~~-~~-~~~p~~l~~~~--------~--~~~-~~~g~~~~~ 260 (393)
T PRK15011 212 ------RRN-----------RRDTLLLFVICTLMWGTN-SL-YI-INMPLFIINEL--------H--LPE-KLAGVMMGT 260 (393)
T ss_pred ------ccc-----------cccHHHHHHHHHHHHHHH-HH-HH-HHHHHHHHHHc--------C--CCH-HHHHHHHHH
Confidence 000 001111111111111111 10 10 11111111100 0 010 111111223
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhh
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART 319 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~ 319 (388)
..+..+++.++.|++.||+|||+.+..+.....+........++.+......+...++.....+....+..|.+|.+ |+
T Consensus 261 ~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g 339 (393)
T PRK15011 261 AAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AG 339 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cc
Confidence 34456778899999999999999776655444333322222222222222111111111111223345678999975 99
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
++.++.+...++|+.++|.+.+.+.+..+....+.+..++.+++.+..++ .|||
T Consensus 340 ~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 393 (393)
T PRK15011 340 SATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR-IKDV 393 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-hcCC
Confidence 99999999999999999999998877655445555555666666555554 3554
No 47
>PRK10504 putative transporter; Provisional
Probab=99.80 E-value=4.9e-17 Score=157.42 Aligned_cols=311 Identities=15% Similarity=0.124 Sum_probs=169.4
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
+++.++.+++++++.++++|+++|++.|.. +....++.|+.|+++|++..+.......+|..+++.++..+.+..+||+
T Consensus 86 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~ 165 (471)
T PRK10504 86 TLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHW 165 (471)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHH
Confidence 456667788999999999999999999875 6677888999999999999999999999999999999888888889999
Q ss_pred HHHHhhHHHHHHH-HHHhcCCCCchHHHhccChHHHHHHHHHHH------HhcCCCCCCCccccchhhhhh------hhc
Q 016515 83 LLAFSSVPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMA------FVNQTKLPPGILVSDKAIKEN------EES 149 (388)
Q Consensus 83 ~f~~~~i~~l~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~ 149 (388)
.|.+......+.. ......||++. ++.|.|.+...+.... ..++.+.. .. .......- ...
T Consensus 166 ~f~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 239 (471)
T PRK10504 166 IFLINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGL-GL--SPLAIAGLVAVGVVALL 239 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcC-Cc--chHHHHHHHHHHHHHHH
Confidence 9988765544433 33344565442 2223332221111100 00010000 00 00000000 000
Q ss_pred hhhhccccccccccccccccccchhhhhhcchhHHHHHHHH-HHHHHHHHHHHH-HHHHHhhhhcCCCCCCCCcccccCC
Q 016515 150 NLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLL-WVLFFANVFSYY-GAVLLTSKLSSGDNKCGSKVLHADK 227 (388)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (388)
....++ .+.+++....+ +++++.....+.. .+.++.....++ ...++..... .
T Consensus 240 ~~~~~~----------~~~~~~~~~~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--------------~ 294 (471)
T PRK10504 240 LYLLHA----------RNNNRALFSLK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLG--------------F 294 (471)
T ss_pred HHHHHH----------hcCCCCccCHH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------C
Confidence 000000 00001111222 2332222222221 111111111111 1112211111 0
Q ss_pred CCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--chhHH-HHHHHHHHHHhhhcccce
Q 016515 228 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--QSAVV-TTVLLFGVRMCVTGTITV 304 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~ 304 (388)
+ ............+..+++..+.+++.||+|||+.+..+..+..+....+... .+... .....+....+....++.
T Consensus 295 ~-~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 373 (471)
T PRK10504 295 S-PFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSS 373 (471)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0111122233344556666889999999999998887766555544433321 12111 111111111222223344
Q ss_pred eeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 305 ATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 305 ~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
...+..+..|.+.|+++.|+.+....+|+.++|.+.+.+.+.
T Consensus 374 ~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 374 MNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred HHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556778899999999999999999999999998888766554
No 48
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.80 E-value=4.4e-17 Score=153.40 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=86.5
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
.+++.+++++++|++.+++.|+++|++.|.. +....++.|+.|+++|++..+....+..+|..++++++..+.+..+||
T Consensus 78 ~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr 157 (382)
T PRK10091 78 CVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWR 157 (382)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHH
Confidence 4677788899999999999999999998875 555667889999999999999999999999999999988877788999
Q ss_pred HHHHHhhHHHHHHH-HHHhcCCCCc
Q 016515 82 WLLAFSSVPSFALL-LFYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~~-~~~~~~pESp 105 (388)
+.|.+.++..++.. ..++++||.+
T Consensus 158 ~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 158 YTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999887765543 3455678754
No 49
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.80 E-value=1.1e-16 Score=151.11 Aligned_cols=103 Identities=19% Similarity=0.325 Sum_probs=86.8
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
.+++.++.+++++++.+++.|+++|++.|.. +....++.|++|+++|++..+.......+|..++++++..+.+.++||
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 95 LTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 3566777888999999999999999999875 667788999999999999999999999999999999999888889999
Q ss_pred HHHHHhhHHHHHHHH-HHhcCCCCc
Q 016515 82 WLLAFSSVPSFALLL-FYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~-~~~~~pESp 105 (388)
+.|++.++.+++..+ .+...||+|
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999988776655433 334567754
No 50
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.80 E-value=1.8e-17 Score=157.40 Aligned_cols=300 Identities=15% Similarity=0.151 Sum_probs=177.1
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWL 83 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~ 83 (388)
.++.++.+++++++.+++.|++.|++.+..+....++.|+.|+++|++..+.......+|..+++.++..+.+..+||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 174 (408)
T PRK09874 95 GIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPV 174 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 44555667788999999999999997554556667888999999999999999999999999999998887778899999
Q ss_pred HHHhhHHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccc
Q 016515 84 LAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTR 162 (388)
Q Consensus 84 f~~~~i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
|++.++..++..+ ....+||.++-. .+.+ +.+.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------------------~~~~~~--------------- 210 (408)
T PRK09874 175 FFITASVLFLCFLVTLFCIRENFQPV---SKKE--------------------------MLHMRE--------------- 210 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccc---cchh--------------------------hhHHHH---------------
Confidence 9988877655433 445566654210 0000 000000
Q ss_pred cccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchh--HHHHHHH
Q 016515 163 KITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSL--YVDVFIA 240 (388)
Q Consensus 163 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 240 (388)
..+.+.+++.............. ..... .........+.. ....+... .....+.
T Consensus 211 -----------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~g~~~~~~ 267 (408)
T PRK09874 211 -----------VVTSLKNPKLVLSLFVTTLIIQV-ATGSI-APILTLYVRELA----------GNVSNIAFISGMIASVP 267 (408)
T ss_pred -----------HHHhCcCCchHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHh----------ccchHHHHHHHHHHHHH
Confidence 00001112222111111111100 00000 011111111000 00000000 0111223
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
+++..++....+++.||+|||+.+..+.....+..+......+.+......+...++.....+....+..+..|.+.|++
T Consensus 268 ~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (408)
T PRK09874 268 GVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGR 347 (408)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccccee
Confidence 45556777788999999999998887766655544443333332222222222222222233344455677889999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
..++.+.+..+|..++|.+.+.+.+..+....+.+.+++.+++.+..++.
T Consensus 348 ~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 348 IFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred eehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888776665666777777777776666554
No 51
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.79 E-value=5.7e-18 Score=160.77 Aligned_cols=314 Identities=17% Similarity=0.299 Sum_probs=183.4
Q ss_pred hhhhhhhhhcC--ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-c
Q 016515 3 TSVAGLLSSFS--PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR-L 78 (388)
Q Consensus 3 ~~i~~~l~~~~--~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~-~ 78 (388)
+++.++++-.+ .+++.+++.|++||++.|.. |+.......|+|++||++..++...+..+|.+++.+++..+.+. .
T Consensus 113 sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~ 192 (466)
T KOG2532|consen 113 SALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL 192 (466)
T ss_pred HHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC
Confidence 34555555443 35568899999999999975 78888999999999999999999999999999999999888877 9
Q ss_pred chHHHHHHhhHHHHHHHHHH-hcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccc
Q 016515 79 NWRWLLAFSSVPSFALLLFY-GLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHM 157 (388)
Q Consensus 79 ~WR~~f~~~~i~~l~~~~~~-~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (388)
||+.+|++.++.+++..+++ ++..|+|+- +.+..+. .++++.+.. .+
T Consensus 193 GW~sifY~~g~~g~i~~~~w~~~~~d~P~~---h~~is~~--El~~I~~~k------------------------~~--- 240 (466)
T KOG2532|consen 193 GWPSIFYVFGIVGLIWFILWFLFYSDSPSK---HPNISEK--ELKYIEKGK------------------------SE--- 240 (466)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcCCccc---CCCCCHH--HHHHHHhcc------------------------cc---
Confidence 99999999999998876655 445788852 1111111 011111000 00
Q ss_pred ccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHH
Q 016515 158 LSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDV 237 (388)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (388)
++..++....++.+++.+- .|.+++.+....++...+..+.+++ ..++.+.+..+.+ ...
T Consensus 241 -------~~~~~~~~vP~~~i~ts~~------vwai~~~~f~~~~~~~~l~~y~PtY----~~~VL~f~v~~~G---~~s 300 (466)
T KOG2532|consen 241 -------AHVKKKPPVPYKAILTSPP------VWAIWISAFGGNWGFYLLLTYLPTY----LKEVLGFDVRETG---FLS 300 (466)
T ss_pred -------cccCCCCCCCHHHHHcCHH------HHHHHHHHHHHHHHHHHHHHHhhHH----HHHHhCCChhhhh---HHH
Confidence 0000001123444444321 2333333332233322222222111 1112233222211 234
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhcccceee
Q 016515 238 FIASLAELPGLILSAIIVDKIGRK---------LSMVLMFVSACIFLLPLVFHQ--SAVVTTVLLFGVRMCVTGTITVAT 306 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr---------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 306 (388)
.++.+..++..+++|.++||+-+| ..-.++..+.+++++.+.+.. ..+..++++... .+..+ +....
T Consensus 301 alP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~-~~~~g-~~~~G 378 (466)
T KOG2532|consen 301 ALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIA-IGLSG-FNISG 378 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHH-HHHcc-cchhh
Confidence 566777888899999999998552 222344455555555555432 222232322222 22222 22333
Q ss_pred eeccccc-ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhccc---chhHHHHHHHHHHHHHHHHhhcc
Q 016515 307 IYAPEIY-PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC---HLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 307 ~~~~El~-p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
.+.+-.- -+++-+...|+++.++.+.++++|.+.+.+..+. .....|++.+++.+++.+...++
T Consensus 379 f~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 379 FYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred hHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 3433344 7788999999999999999999999998777321 12234555556666665444333
No 52
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.78 E-value=3.6e-16 Score=146.88 Aligned_cols=103 Identities=14% Similarity=0.252 Sum_probs=86.2
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++.+++++++.++++|+++|++.+.. +....++.|+.|+++|++..++.+....+|..+++.++..+.+.++||
T Consensus 66 ~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 145 (377)
T PRK11102 66 FALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWH 145 (377)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChH
Confidence 3566677778899999999999999998765 566788999999999999999999999999999999988877778999
Q ss_pred HHHHHhhHHHHHH-HHHHhcCCCCc
Q 016515 82 WLLAFSSVPSFAL-LLFYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~-~~~~~~~pESp 105 (388)
+.|++.++..++. .+..+++||++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 146 AIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999887776655 34456678764
No 53
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.78 E-value=6e-16 Score=145.60 Aligned_cols=103 Identities=19% Similarity=0.272 Sum_probs=86.3
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++.+++++++.++++|+++|++.+.. +....++.|+.|+++|++..+..+....+|..+++.++..+.+..+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 159 (385)
T TIGR00710 80 FALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWH 159 (385)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 3566777788999999999999999998875 566788999999999999999999999999999999988877788999
Q ss_pred HHHHHhhHHHHHH-HHHHhcCCCCc
Q 016515 82 WLLAFSSVPSFAL-LLFYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~-~~~~~~~pESp 105 (388)
+.|++.++..++. ....+..||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 160 AIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998887766554 33445577765
No 54
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.77 E-value=2.2e-17 Score=153.31 Aligned_cols=273 Identities=25% Similarity=0.406 Sum_probs=161.5
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
+++.++..++++++.+++.|+++|++.+.. +....++.|+.|+++|++..+..+....+|.++++.++..+.+..+||+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~ 152 (352)
T PF07690_consen 73 ALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRW 152 (352)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCC
T ss_pred hhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccc
Confidence 334344456688889999999999998765 6778899999999999999999999999999999999998888889999
Q ss_pred HHHHhhHHHHHHHHH-HhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 83 LLAFSSVPSFALLLF-YGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 83 ~f~~~~i~~l~~~~~-~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
.|++.++..++..++ ..+.+|.|+.-..+ + + + +++++
T Consensus 153 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~---------------------~--------~-~-~~~~~----------- 190 (352)
T PF07690_consen 153 AFLISAILSLIAAILFILFLPEPPPPRERE---------------------S--------P-K-ESESK----------- 190 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCC---STTTT-----------------------S--------S-T-TTT-------------
T ss_pred ccccccchhhhhhhhHhhhhhhcccccccc---------------------c--------c-c-ccccc-----------
Confidence 999998887776543 35556554310000 0 0 0 00000
Q ss_pred ccccccccccchh-hhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 162 RKITDKLKSGFSS-FFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKL-SSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 162 ~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
.+++..+ ++.+++++... ..+...+...+.++....+.+.+ .+ ..+. +..........+
T Consensus 191 ------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~--~~~~~~~~~~~~ 251 (352)
T PF07690_consen 191 ------KPKPLKPGFKSLFKNPVLW---ILLIAFFLFFFVFSGFSFFLPLYLQE--------VLGF--SGPSQAGLLFSI 251 (352)
T ss_dssp ------HHHCCCH-CTHHHHHHCCH---HHHHHHHHHHHHHHHHHHHHHHHCCH--------HHHC--CTHHHHHHHHHH
T ss_pred ------cccccccccccccccchhh---hhhhhhhHHHHHHHHhhcccchhhhh--------ccCC--CHHHHHHHHHHH
Confidence 0000011 22232222111 11111111222222222222221 10 0001 100111122344
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh---hchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+...++.++.+++.||+|+|+..........+..+.+.. ..+........+...++.....+....+..|..|++
T Consensus 252 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (352)
T PF07690_consen 252 FGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPE 331 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTC
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 55666777899999999999877666555444443333322 212222222222233333334566778999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHH
Q 016515 317 ARTTGFGVASSLGKVGGMVCP 337 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p 337 (388)
.|+++.|+.+.+..+++.++|
T Consensus 332 ~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 332 YRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999987
No 55
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.77 E-value=1.6e-16 Score=154.53 Aligned_cols=319 Identities=13% Similarity=0.091 Sum_probs=169.4
Q ss_pred hhhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhh-cccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 016515 2 VTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEF-VPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN 79 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~-~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~ 79 (388)
+..++++++++++|++.++++|+++|++.|.. +.....+.++ .|+++|++..++....+.+|..+++.++..+.+..+
T Consensus 80 ~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 80 LFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 34677888999999999999999999998765 5555556565 478999999999999999999999999999988999
Q ss_pred hHHHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHH-------HHHhcCCCCCCCccccchhhhhhhhchh
Q 016515 80 WRWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEK-------MAFVNQTKLPPGILVSDKAIKENEESNL 151 (388)
Q Consensus 80 WR~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (388)
||+.|++.....++. .+..+.+||+|+- ++++.|.....+.. ....+..+.... ....-.......
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~ 233 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLS----LWVTSLTLLTGA 233 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCc----hHHHHHHHHHHH
Confidence 999999876555444 3445667887641 11112111111000 000000000000 000000000000
Q ss_pred hhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcCCCCCCCCcccccCCCCC
Q 016515 152 LRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTS-KLSSGDNKCGSKVLHADKSKD 230 (388)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 230 (388)
.. .......+.+.+.+...+ .+++++......+ ..+...+.+++...+.+ .+.... + .+.
T Consensus 234 ~~----l~~f~~~e~~~~~p~~~~-~lf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~lq~v~--------g---~s~ 294 (495)
T PRK14995 234 LL----LGLFIRTQLAASRPMIDM-RLFTHRIILSGVV---MAMTAMITLVGFELLMAQELQFVH--------G---LSP 294 (495)
T ss_pred HH----HHHHHHHHhcCCCCCcCH-HHhCCcccHHHHH---HHHHHHHHHHHHHHHHHHHHHHHc--------C---CCH
Confidence 00 000000000001111112 2333222221111 11111222222222111 111000 0 000
Q ss_pred chhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--h-chhHHHHHHHHHHHHhhhcccceeee
Q 016515 231 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--H-QSAVVTTVLLFGVRMCVTGTITVATI 307 (388)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
...-.......+...++..+.|++.||+|||+.+..+.....+....+.. . .+.+......+...+......+....
T Consensus 295 ~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~ 374 (495)
T PRK14995 295 LEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTS 374 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHH
Confidence 11112233445667788899999999999999887776555443333221 1 12222122222222222222334455
Q ss_pred ecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 308 YAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 308 ~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
...+..|++.++.+.++.+....+|+.+++.+.+.+.+
T Consensus 375 ~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 375 AIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999999999999888877766543
No 56
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1e-17 Score=159.46 Aligned_cols=103 Identities=25% Similarity=0.437 Sum_probs=90.2
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH------hc
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV------MT 76 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~------~~ 76 (388)
++.++++....|++.+++.|++.|+..++. |....+++-|..+++||..++++....++|+++++++++.+ ..
T Consensus 122 ~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 122 GLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 566667777889999999999999999865 88888999999999999999999999999999999998885 23
Q ss_pred ccchHHHHHHhhHHHHHH-HHHHhcCCCCch
Q 016515 77 RLNWRWLLAFSSVPSFAL-LLFYGLAPESPR 106 (388)
Q Consensus 77 ~~~WR~~f~~~~i~~l~~-~~~~~~~pESp~ 106 (388)
..||||+|++.++..++. ++..+++|+.|.
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 579999999999887776 456677999997
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.77 E-value=4.5e-16 Score=147.09 Aligned_cols=102 Identities=19% Similarity=0.256 Sum_probs=84.5
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++..++++++.+++.|+++|++.+.. +....++.|+.|+++|++..+..+....+|..+++.++..+.+..+||+
T Consensus 79 ~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~ 158 (392)
T PRK10473 79 IIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQS 158 (392)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH
Confidence 556667778899999999999999998875 5667889999999999999999999999999999988887777789999
Q ss_pred HHHHhhHHHHHHH-HHHhcCCCCc
Q 016515 83 LLAFSSVPSFALL-LFYGLAPESP 105 (388)
Q Consensus 83 ~f~~~~i~~l~~~-~~~~~~pESp 105 (388)
.|++.++..++.. +....+||++
T Consensus 159 ~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 159 LFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9998877766543 3445678764
No 58
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.77 E-value=1.3e-15 Score=144.74 Aligned_cols=103 Identities=13% Similarity=0.181 Sum_probs=83.6
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++.+++++++.+++.|+++|++.+.. +...+++.|+.|+++|++..+.......+|..+++.++..+.+..+||+
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~ 168 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRG 168 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccH
Confidence 456667788899999999999999998864 5667788999999999998888888888888999888877777789999
Q ss_pred HHHHhhHHHHHHHH-HHhcCCCCch
Q 016515 83 LLAFSSVPSFALLL-FYGLAPESPR 106 (388)
Q Consensus 83 ~f~~~~i~~l~~~~-~~~~~pESp~ 106 (388)
.|++.++..++..+ .++..||+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 99988877665543 4455787653
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.77 E-value=4.9e-17 Score=156.44 Aligned_cols=314 Identities=11% Similarity=0.086 Sum_probs=164.7
Q ss_pred hhhhhhhhhcCccHHHHHH-HHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 016515 3 TSVAGLLSSFSPNYVSLVI-FRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNW 80 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~-~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~W 80 (388)
.+++.++++++++++.+++ .|+++|++.|.. +....++.|++| ++|++..++.+.+..+|..++++++..+.+.+||
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw 172 (455)
T TIGR00892 94 ASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGW 172 (455)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh
Confidence 3566778888999998875 579999998864 555567789886 7899999999999999999999988877778899
Q ss_pred HHHHHHhhHHHHHHHHHHhc-CCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccc
Q 016515 81 RWLLAFSSVPSFALLLFYGL-APESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLS 159 (388)
Q Consensus 81 R~~f~~~~i~~l~~~~~~~~-~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (388)
|+.|++.++..++..+...+ .|+.+.. .+.+ ++.+ .+.+++ . ..++. +.
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~--~~~~-~~~~-----------~~~~~~-----~--~~~~~----~~----- 222 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQ--RVSK-SKSK-----------EGLPPD-----G--STKKL----SK----- 222 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccc--cccc-cccc-----------ccCCCC-----C--ccccc----cc-----
Confidence 99999988876654333322 3332210 0000 0000 000000 0 00000 00
Q ss_pred ccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 160 MTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
... .++......++.+.+++.+. .....+...+.++....+.+.+..+.. . + .........+
T Consensus 223 -~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~l~~~~~~~g--------~--s-~~~~g~~~~~ 284 (455)
T TIGR00892 223 -KST--AEKINRFLDFSLFTHRGFLV----YLSGNVIMFLGFFAPIIFLVPYAKDKG--------V--D-EYEAAFLLSI 284 (455)
T ss_pred -cch--hhhhhhhcchHHhcCchHHH----HHHHHHHHHHHccchHHHHHHHHHHcC--------C--C-HHHHHHHHHH
Confidence 000 00000000111121222221 111111122222222211111111100 0 0 1111122334
Q ss_pred HHhhhhHHHHHHHHHHHHh--chhHHHHHH--HHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 240 ASLAELPGLILSAIIVDKI--GRKLSMVLM--FVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~--gRr~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
.+++.+++.++.+++.||. ++|+..... .+..++..+......+.+..........++.....+..+.+..|.+|+
T Consensus 285 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~ 364 (455)
T TIGR00892 285 IGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGA 364 (455)
T ss_pred HHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhH
Confidence 4666677788889999973 334333222 222222222222222222222222222223223334566788899999
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHH
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIA 365 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 365 (388)
+.|+++.|+.+.+..+|+.++|.+.+.+.+..+ ....+.+.+++.+++.+
T Consensus 365 ~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 365 QRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999988776543 33444444444444443
No 60
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.76 E-value=3.1e-16 Score=148.09 Aligned_cols=292 Identities=13% Similarity=0.135 Sum_probs=164.9
Q ss_pred hhhhhhhhhcC-----ccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH----
Q 016515 3 TSVAGLLSSFS-----PNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV---- 73 (388)
Q Consensus 3 ~~i~~~l~~~~-----~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~---- 73 (388)
.++.+++++++ ++++++++.|++.|++.+..++....+.+|+|+++||++.++......+|..+++.+.-.
T Consensus 110 ~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 110 LIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35666777765 899999999999999833346677889999999999999999865555555444333221
Q ss_pred -Hhc-------------ccchHHHHHHhhHHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccc
Q 016515 74 -VMT-------------RLNWRWLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILV 138 (388)
Q Consensus 74 -~~~-------------~~~WR~~f~~~~i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 138 (388)
+.. ..+||...++-.++.++..+ .++.+++.|. .|.+.
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~------------------------ 242 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI------------------------ 242 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH------------------------
Confidence 111 23488877766655554433 3333444331 00000
Q ss_pred cchhhhhhhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCC
Q 016515 139 SDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKC 218 (388)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (388)
++ ....+.+++ ++++..++++..-+|.++..+.+.+.+.
T Consensus 243 -------~~--------------------------~~~vlk~~~----~Wllslly~~tFG~fvg~s~~lp~~~~~---- 281 (462)
T PRK15034 243 -------AD--------------------------QLPVLQRLH----LWLLSLLYLATFGSFIGFSAGFAMLAKT---- 281 (462)
T ss_pred -------HH--------------------------HHHHhCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 00 000011122 1222223333332333333222222110
Q ss_pred CCcccccCCCCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh--hhch---hHHHHHHHHH
Q 016515 219 GSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV--FHQS---AVVTTVLLFG 293 (388)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~ 293 (388)
.+ + +........+..+...++..++|+++||+|||+++..+.....++..... .+.+ ........+.
T Consensus 282 -----~~--~-~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~ 353 (462)
T PRK15034 282 -----QF--P-DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFM 353 (462)
T ss_pred -----Hc--C-hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 00 0 11112223334455677778999999999999988877765555443322 2211 1111122222
Q ss_pred HHHhhhccc-ceeeeeccccccc---------------------chhhHHHHHHHHHHhHhHhHHHHHHHHhhcccch-h
Q 016515 294 VRMCVTGTI-TVATIYAPEIYPT---------------------SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL-R 350 (388)
Q Consensus 294 ~~~~~~~~~-~~~~~~~~El~p~---------------------~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~-~ 350 (388)
..+...+.. ...+-+.+..||. +.-+...|+..+.|.+|+++.|.+.+...+.++. .
T Consensus 354 ~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~ 433 (462)
T PRK15034 354 GLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPV 433 (462)
T ss_pred HHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcH
Confidence 222333333 3466788888885 1466778999999999999999888877766543 3
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 016515 351 LAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 351 ~~~~i~~~~~~~~~~~~~~~ 370 (388)
..+..+.+..++|.++.+.+
T Consensus 434 ~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 434 GAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777654
No 61
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.76 E-value=1.1e-15 Score=144.86 Aligned_cols=290 Identities=14% Similarity=0.117 Sum_probs=157.8
Q ss_pred CccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHH-HHHHHHHHHHhcccchHHHHHHhhHH
Q 016515 13 SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGT-IFEASLAWVVMTRLNWRWLLAFSSVP 90 (388)
Q Consensus 13 ~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~-~~~~~l~~~~~~~~~WR~~f~~~~i~ 90 (388)
.++++.+++.|+++|++.+.. +....++.|+.|+++||++++..+....+|. ++++.++..+.+..||+..++.....
T Consensus 102 ~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 102 HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 368899999999999998764 4556778899999999999999999999997 57777776666667855544433222
Q ss_pred HHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccccccccccc
Q 016515 91 SFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLK 169 (388)
Q Consensus 91 ~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
.++. .+..+..+|.|+ .++. + + +.+.++
T Consensus 182 ~~~~~~~~~~~~~~~~~-------~~~~-------------~-~--------~~~~~~---------------------- 210 (402)
T TIGR00897 182 VLTGGVIALFSNKDIFT-------PQHM-------------Q-T--------REKFSE---------------------- 210 (402)
T ss_pred HHHHHHHHHhccCCCCC-------cccc-------------c-C--------Ccchhh----------------------
Confidence 2221 122223343221 0000 0 0 000000
Q ss_pred ccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHH
Q 016515 170 SGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLI 249 (388)
Q Consensus 170 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (388)
....++.+++.+... ......+.+...+++...+.+.+.++. +. +. ...........++..++.+
T Consensus 211 -~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~--------g~--s~-~~~~~~~~~~~~~~~ig~~ 275 (402)
T TIGR00897 211 -LGKAATILFTNPNVL---LGGMVRIINTIGLFGFAVFLPMFVAEL--------GF--ST-SEWLQIWGTFFFTNIVFNV 275 (402)
T ss_pred -HHHHHHHHHcChhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHc--------CC--Ch-hHHHHHHHHHHHHHHHHHH
Confidence 000111222222111 111222223333333333333221111 00 11 1111222344567789999
Q ss_pred HHHHHHHHhchhHHHH-HHHHHHHHHHHHHh-h----hchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHH
Q 016515 250 LSAIIVDKIGRKLSMV-LMFVSACIFLLPLV-F----HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFG 323 (388)
Q Consensus 250 ~~~~l~d~~gRr~~~~-~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~ 323 (388)
..|+++||+|||+... .+.....+..+.+. . .+..+......+...++..+..+ .....+|..| +.|+++.|
T Consensus 276 ~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g 353 (402)
T TIGR00897 276 IFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMS 353 (402)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHH
Confidence 9999999999887653 22222222211111 1 11222111222222222222222 2334567655 58999999
Q ss_pred HHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 324 VASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 324 ~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
+.+....+++.++|.+.+.+.+..+....+++.+++.+++.+...|.
T Consensus 354 ~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 354 VLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998887776667777777777776666553
No 62
>PRK11043 putative transporter; Provisional
Probab=99.75 E-value=2.2e-15 Score=142.86 Aligned_cols=103 Identities=14% Similarity=0.194 Sum_probs=83.7
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++.+++++++.+++.|+++|++.+.. +....++.|+.|+++|++..+.......+|..+++.++..+.+..+||
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~ 160 (401)
T PRK11043 81 FALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQ 160 (401)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Confidence 3456677788999999999999999998764 445578899999999998888888888889999998888887888999
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp 105 (388)
+.|++.++..++..+..++++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 161 AIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999988887776655555566554
No 63
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.75 E-value=1.6e-15 Score=143.86 Aligned_cols=101 Identities=19% Similarity=0.116 Sum_probs=78.8
Q ss_pred hhhhhhcC---ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-cch
Q 016515 6 AGLLSSFS---PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR-LNW 80 (388)
Q Consensus 6 ~~~l~~~~---~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~-~~W 80 (388)
+..+.++. .+++.+++..++.|+..+.. +...+++.|+.|+++|+++.++...++.+|.++++.++..+.+. +||
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 33444555 35777888888888665554 66778999999999999999999999999999999888777664 599
Q ss_pred HHHHHHhhHHHHHHHHHHhcCCCCch
Q 016515 81 RWLLAFSSVPSFALLLFYGLAPESPR 106 (388)
Q Consensus 81 R~~f~~~~i~~l~~~~~~~~~pESp~ 106 (388)
|..|++.++..++..+..++.||+++
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~~ 186 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPEV 186 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999988776665555566788653
No 64
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.74 E-value=3.3e-16 Score=146.05 Aligned_cols=261 Identities=16% Similarity=0.133 Sum_probs=147.7
Q ss_pred hhhhhhhcC---ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Q 016515 5 VAGLLSSFS---PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN- 79 (388)
Q Consensus 5 i~~~l~~~~---~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~- 79 (388)
+...+.++. .+.+.+....++.|++.+.. +...+++.|++|+|+|++..+..+.++.+|.++++.++..+.+..+
T Consensus 69 ~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~ 148 (356)
T TIGR00901 69 SLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFA 148 (356)
T ss_pred HHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 444455566 35556777777777666554 5667889999999999999999999999999999999877766666
Q ss_pred -------hHHHHHHhhHHHHHHHHHHh-cCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchh
Q 016515 80 -------WRWLLAFSSVPSFALLLFYG-LAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNL 151 (388)
Q Consensus 80 -------WR~~f~~~~i~~l~~~~~~~-~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (388)
||..|++.++..++..+..+ ..||+++. +.+.++ +..+.
T Consensus 149 ~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~---------------------------~~~~~--- 195 (356)
T TIGR00901 149 NTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED---ASVPKP---------------------------LTQAV--- 195 (356)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc---cccchh---------------------------HHHHH---
Confidence 99999999887776655544 35774320 000000 00000
Q ss_pred hhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhcCCCCCCCCcccccCCCCC
Q 016515 152 LRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVL-LTSKLSSGDNKCGSKVLHADKSKD 230 (388)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 230 (388)
...++.+++++..+.........+...+.++.... ....+.. .. .+.
T Consensus 196 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g----------~~~- 243 (356)
T TIGR00901 196 --------------------LKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MG----------FSK- 243 (356)
T ss_pred --------------------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC----------CCH-
Confidence 00112222222111122222222222222222221 1111110 00 000
Q ss_pred chhH-HHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--c--------hh-HHHHHHHHHHHHhh
Q 016515 231 NSLY-VDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--Q--------SA-VVTTVLLFGVRMCV 298 (388)
Q Consensus 231 ~~~~-~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~--~--------~~-~~~~~~~~~~~~~~ 298 (388)
.... .......+..+++.++++++.||+|||+.+..+.++.++....+... . +. +......+...++.
T Consensus 244 ~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 323 (356)
T TIGR00901 244 EEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTG 323 (356)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHh
Confidence 1111 11122234567899999999999999988777666555443332221 1 11 21222222222333
Q ss_pred hcccceeeeecccccccchhhHHHHHHHHHHh
Q 016515 299 TGTITVATIYAPEIYPTSARTTGFGVASSLGK 330 (388)
Q Consensus 299 ~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~ 330 (388)
....+....+..|.+|++.|++..|+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 324 GLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 34445677899999999999999999887654
No 65
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.74 E-value=7.8e-16 Score=164.74 Aligned_cols=273 Identities=13% Similarity=0.036 Sum_probs=158.5
Q ss_pred hhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc---------c
Q 016515 9 LSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR---------L 78 (388)
Q Consensus 9 l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~---------~ 78 (388)
+..++++++.++++|+++|++.|.. ++..+++.|++|+++|+++.++.+.+..+|.++++.++.++... .
T Consensus 96 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~ 175 (1146)
T PRK08633 96 LAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEIL 175 (1146)
T ss_pred HHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence 3445678999999999999998875 67778999999999999999999999999999999998877654 2
Q ss_pred chHHHHHHhhHH-HHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccc
Q 016515 79 NWRWLLAFSSVP-SFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHM 157 (388)
Q Consensus 79 ~WR~~f~~~~i~-~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (388)
+|++.+.+..+. .++.+++.+.+||+|+....+++ + + .....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~---------~~~~~------------ 218 (1146)
T PRK08633 176 GRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFD--K--------------K---------KYLFP------------ 218 (1146)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccc--c--------------c---------ccccH------------
Confidence 455554444433 33445555667988753110000 0 0 00000
Q ss_pred ccccccccccccccchhhhhhcchhHHHHHHHH-HHHHHHHHH-HHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHH
Q 016515 158 LSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLL-WVLFFANVF-SYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYV 235 (388)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (388)
+.....++.+++.+.....++. .+.++.... ..+...+....+. .+.......
T Consensus 219 -----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------------~s~~~~~g~ 273 (1146)
T PRK08633 219 -----------KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLG--------------LDNTFQVQY 273 (1146)
T ss_pred -----------HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC--------------CCcHHHHHH
Confidence 0000122333333332222221 111111111 1111111111111 011101112
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
......++.+++.++.+++.||.++|+.+.++.++.+++.+.+....+.+...+..+...++.....+....+..|..|+
T Consensus 274 ~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 353 (1146)
T PRK08633 274 LLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPE 353 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCc
Confidence 23445566788899999999999988877766655555444443333322222222222233333334456788899999
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHh
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGL 343 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~ 343 (388)
+.|+++.|+.+.+..+++.+++.+...+
T Consensus 354 ~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 354 KELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887777655443
No 66
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.72 E-value=9.5e-15 Score=138.85 Aligned_cols=103 Identities=16% Similarity=0.193 Sum_probs=87.0
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..+++++++++++++.++++|+++|++.+.. +....++.|+.|+++|++..+.......+|..+++.++..+.+.++||
T Consensus 91 ~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 91 FTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 4567788889999999999999999998754 345567889999999999999999999999999999988877778999
Q ss_pred HHHHHhhHHHHHHHH-HHhcCCCCc
Q 016515 82 WLLAFSSVPSFALLL-FYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~-~~~~~pESp 105 (388)
+.|++.++..++..+ .++.+||++
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999998888776544 355689875
No 67
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.72 E-value=3.5e-15 Score=140.91 Aligned_cols=297 Identities=13% Similarity=0.053 Sum_probs=162.3
Q ss_pred hhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 016515 5 VAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWL 83 (388)
Q Consensus 5 i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~ 83 (388)
+++++.+++++. ++.|+++|++.|.. |...+++.|++|+++|+++.+..+.....|.++++.++..+.+. .|+..
T Consensus 80 ~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~ 155 (393)
T PRK11195 80 LGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAA 155 (393)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 344444555543 78999999998875 77789999999999999999999999999999999998887654 48888
Q ss_pred HHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccccc
Q 016515 84 LAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRK 163 (388)
Q Consensus 84 f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
+.+.+...++..+....+||+|+.. +++.++..+.+ ++.
T Consensus 156 ~~i~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~------------------------~~~--------------- 194 (393)
T PRK11195 156 LAVCALIYLLAALFNLFIPRLGARR--PGQSWNPIALL------------------------RDF--------------- 194 (393)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccc--cccCCCHHHHH------------------------HHH---------------
Confidence 7776655444455567789876421 00000000000 000
Q ss_pred ccccccccchhhhhhcchhHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHh
Q 016515 164 ITDKLKSGFSSFFMLFSRKLIRTTLLL-WVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASL 242 (388)
Q Consensus 164 ~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (388)
....+.+++.+..+..... .+.+.......+....+.+.... . + ...........++
T Consensus 195 --------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg-----------~--s-~~~~G~~~~~~~~ 252 (393)
T PRK11195 195 --------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALG-----------I--T-LNQPAYLQAVVAI 252 (393)
T ss_pred --------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------C--C-hhHHHHHHHHHHH
Confidence 0011122332322222221 12222222222222222221110 0 1 1111222344566
Q ss_pred hhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch-hhHH
Q 016515 243 AELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA-RTTG 321 (388)
Q Consensus 243 ~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~-R~~~ 321 (388)
+.++++++.+++.||.++|+.+..+...+ +....+....+.+......+...++.....+.......|.-|++. ++++
T Consensus 253 g~i~g~~~~~~l~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~ 331 (393)
T PRK11195 253 GIAVGAGAAARLVTLETVLRVLPAGILMG-LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHS 331 (393)
T ss_pred HHHHHHHHHHHHhcCCcccchHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhH
Confidence 77888888899999988887776664332 222222222222222222222222221122223344566666654 7999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 322 FGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 322 ~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
.++.+...+++..++..+...+ +..+....+.+.+...+++....+.+
T Consensus 332 ~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 332 IAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888776644 34444444444444444444444433
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.72 E-value=7.6e-15 Score=138.98 Aligned_cols=99 Identities=18% Similarity=0.155 Sum_probs=81.3
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++.+++++++.++++|+++|++.|.. +...+++.|++|+++|++..+..+....+|..+++.++..+. .++||+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~ 165 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRL 165 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHH
Confidence 456666778899999999999999987754 666788899999999999999999999999999999988777 689999
Q ss_pred HHHHhhHHHHHHH-HHHhcCCC
Q 016515 83 LLAFSSVPSFALL-LFYGLAPE 103 (388)
Q Consensus 83 ~f~~~~i~~l~~~-~~~~~~pE 103 (388)
.|++.++..++.. +..++.||
T Consensus 166 ~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCc
Confidence 9998877655543 33344555
No 69
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.70 E-value=1.6e-14 Score=135.90 Aligned_cols=284 Identities=18% Similarity=0.137 Sum_probs=156.2
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++.+++++++.+++.|+++|++.|.. +.....+.+..|+++|++..+..+....+|..+++.++..+.+...|+
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 81 FAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Confidence 3456677788999999999999999998875 555667778899999999999999999999999999887765443333
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
..+....+...+........+|++. + + +.. +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~------~-----------------~---------------~~~---~-------- 191 (381)
T PRK03633 161 LPWVTGLVLAAILPLLFTRILNQQA------E-----------------N---------------HDS---T-------- 191 (381)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCC------C-----------------C---------------CCC---C--------
Confidence 3222111111111111111222100 0 0 000 0
Q ss_pred ccccccccccchhhhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIA 240 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
+.+..++ ++.+. .....+........++. +....+.+ . + .+ .........+.
T Consensus 192 ------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~lp~~~~~-~---g-------~s-~~~~g~~~~~~ 244 (381)
T PRK03633 192 ------------SIWPMLKLRQARL-GVNGCIISGIVLGSLYG--LMPLYLNH-Q---G-------MS-DASIGFWMALL 244 (381)
T ss_pred ------------CHHHHHHhcchHH-HHHHHHHHHHHHHHHHH--HHHHHHHH-c---C-------CC-HHHHHHHHHHH
Confidence 0001111 11111 11111111111111111 11111110 0 0 01 01111223344
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
.+..+++.+..+++.||+|||+.+..+.....+....+. ... .. ...............+.......|..|++.++.
T Consensus 245 ~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~~-~~-~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~ 321 (381)
T PRK03633 245 VSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQA-AM-APALFILGAAGFTLYPVAMAWACEKVEHHELVA 321 (381)
T ss_pred HHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hhH-HH-HHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHH
Confidence 566788899999999999999987766555444333222 111 11 111111111112234555566789999888888
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 365 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 365 (388)
+.+..+....+|+.++|.+.+.+.+..+....+.+.+.+.++..+
T Consensus 322 ~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 322 MNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 888887778899999999999888876655566665555555443
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.70 E-value=1.7e-15 Score=141.67 Aligned_cols=104 Identities=16% Similarity=0.355 Sum_probs=75.2
Q ss_pred hhhhhhhhhcCc-cHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-----
Q 016515 3 TSVAGLLSSFSP-NYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT----- 76 (388)
Q Consensus 3 ~~i~~~l~~~~~-~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~----- 76 (388)
..++.++.++++ +++.++++|+++|++.+..+....++.|+.|+++|++..++......+|..+++.++..+..
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 356667778888 99999999999999865545566789999999999999999887777777766665543322
Q ss_pred -----ccchHHHH-HHhhHHH-HHHHHHHhcCCCCch
Q 016515 77 -----RLNWRWLL-AFSSVPS-FALLLFYGLAPESPR 106 (388)
Q Consensus 77 -----~~~WR~~f-~~~~i~~-l~~~~~~~~~pESp~ 106 (388)
..+||+.| ...++.. +...+.....+|+|+
T Consensus 157 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 157 AGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 34899998 4334333 333444556677764
No 71
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.70 E-value=1.1e-14 Score=139.62 Aligned_cols=315 Identities=14% Similarity=0.088 Sum_probs=169.2
Q ss_pred hhhhhhhcCcc------HHHHHHHHHHhhccCcch-hhHHHHHHhhc-ccCchhhHHHHHHHHHHHHHHHHHHHHHHHh-
Q 016515 5 VAGLLSSFSPN------YVSLVIFRCFVGVGLGGV-PVFLAYFLEFV-PVSHRGRWMVALSAFWTAGTIFEASLAWVVM- 75 (388)
Q Consensus 5 i~~~l~~~~~~------~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~-p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~- 75 (388)
++.++..++|+ +..+++.+++.|++.+.. ....++..|.. ++++|++..+..+.+..+|.++++.+...+.
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~ 161 (437)
T TIGR00792 82 IVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVS 161 (437)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555554 456777888888876653 33445677887 5689999999888888888777665543332
Q ss_pred ------cccchHHHHHHhhHHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhh
Q 016515 76 ------TRLNWRWLLAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEE 148 (388)
Q Consensus 76 ------~~~~WR~~f~~~~i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (388)
+..+||+.+.+.++.+++..+ ..+.+||.|+. +.++ ++.
T Consensus 162 ~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~-----~~~~-----------------------------~~~ 207 (437)
T TIGR00792 162 YFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSE-----IPKN-----------------------------IEK 207 (437)
T ss_pred HhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCC-----CCcc-----------------------------ccc
Confidence 246899999888887766544 44556775410 0000 000
Q ss_pred chhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCC
Q 016515 149 SNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKS 228 (388)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (388)
+. ...+.++.+++++......+. .+...+.++........+.+. .. .+
T Consensus 208 ~~-------------------~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-------~~---~~ 255 (437)
T TIGR00792 208 KL-------------------SLKQIFKALFKNDQLLILCLA---YLFYNLAFNIKNGVQVYYFTY-------VL---GD 255 (437)
T ss_pred CC-------------------CHHHHHHHHhCCHHHHHHHHH---HHHHHHHHHHHcchhheeEee-------ec---CC
Confidence 00 000122333333222221111 111112222111111111110 00 00
Q ss_pred CCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-hhHHHHHHHHHHHHhhhcccceeee
Q 016515 229 KDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-SAVVTTVLLFGVRMCVTGTITVATI 307 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
. ........+..+..+++.++.+++.||+|||+.+..+..+..+..+.+.... +.+......+...++.....+..+.
T Consensus 256 ~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 256 P-ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111122334667788899999999999999988877665554444333322 2222222222222232333455677
Q ss_pred ecccccc-------cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchh--------------HHHHHHH-HHHHHHHH
Q 016515 308 YAPEIYP-------TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR--------------LAVILFE-VVFVLAIA 365 (388)
Q Consensus 308 ~~~El~p-------~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~--------------~~~~i~~-~~~~~~~~ 365 (388)
+.+|..| .+.++++.|+.+.+..+++.+++.+.+.+.+..+.. ..+.+.. ++.+++.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~~ 414 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALFLLLAAI 414 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777765 667899999999999999999998888776543210 0122222 33344444
Q ss_pred Hhh-cccccccCcchhhhHHhhhC
Q 016515 366 SSL-LFPFETMGRELKDTVDAIES 388 (388)
Q Consensus 366 ~~~-~~~pet~~~~l~~~~~~~~~ 388 (388)
... ++ |.++ ++.+|+++|+|+
T Consensus 415 ~~~~~y-~l~~-~~~~~i~~~l~~ 436 (437)
T TIGR00792 415 IIGRFY-KLTE-KKHAEIVEELEQ 436 (437)
T ss_pred HHHHHe-eCcH-HHHHHHHHHHhc
Confidence 444 44 4443 456677777764
No 72
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.70 E-value=2.7e-15 Score=160.30 Aligned_cols=269 Identities=13% Similarity=0.020 Sum_probs=159.2
Q ss_pred cCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHH
Q 016515 12 FSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVP 90 (388)
Q Consensus 12 ~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~ 90 (388)
..+++++++++|+++|++.+.. |+..+++.|++|+++|++++++.+.+..+|.+++++++.++....+||+.|+...+.
T Consensus 104 ~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~ 183 (1140)
T PRK06814 104 HLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGI 183 (1140)
T ss_pred HHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 4589999999999999998865 778889999999999999999999999999999999999988889999999665555
Q ss_pred HHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccc
Q 016515 91 SFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKS 170 (388)
Q Consensus 91 ~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (388)
.++.+++.+++||++. .+.+. + . +.+.. + .
T Consensus 184 ~~~~~~~~~~~~~~~~---~~~~~----------------~---------~--~~~~~----~----------------~ 213 (1140)
T PRK06814 184 AVLGWLASLFIPKTGN---AAPDL----------------K---------I--DRNII----R----------------S 213 (1140)
T ss_pred HHHHHHHHhhCCCCCC---CCCCC----------------e---------e--ccchH----H----------------H
Confidence 5555666667777642 00000 0 0 00000 0 0
Q ss_pred cchhhhhhcchhHHHHHHHH-HHHHHHH-HHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHH
Q 016515 171 GFSSFFMLFSRKLIRTTLLL-WVLFFAN-VFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGL 248 (388)
Q Consensus 171 ~~~~~~~l~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (388)
....++.+++.+......+. .+.++.. .+..+...+....+. .............+++.++|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g---------------~~~~~~g~~~~~~~~g~~ig~ 278 (1140)
T PRK06814 214 TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLG---------------GDENVATLFLAVFSVGVAVGS 278 (1140)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcC---------------CchHHHHHHHHHHHHHHHHHH
Confidence 00112223332222222221 1111111 111111111111111 001111122344566778899
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--------------------chhHHHHHHHHHHHHhhhcccceeeee
Q 016515 249 ILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--------------------QSAVVTTVLLFGVRMCVTGTITVATIY 308 (388)
Q Consensus 249 ~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (388)
++.+++.|+.++++.+..+.++.+++.+.+... .+.+...+..+...++.........++
T Consensus 279 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 358 (1140)
T PRK06814 279 FLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAA 358 (1140)
T ss_pred HHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 999999987776654444333332222211110 222222222222223322333346678
Q ss_pred cccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 309 APEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 309 ~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
..+..|++.||++.|+.+.+..++..+++.+.+.+.+
T Consensus 359 ~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 359 LQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988877654
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.69 E-value=3.6e-14 Score=133.62 Aligned_cols=284 Identities=14% Similarity=0.005 Sum_probs=162.9
Q ss_pred hhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhh
Q 016515 10 SSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSS 88 (388)
Q Consensus 10 ~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~ 88 (388)
..++++++.+++.|+++|.+.+.. |...++..|+ +++|++..+......++|.+++++++..+.+.+|||..|.+..
T Consensus 88 ~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~ 165 (382)
T TIGR00902 88 SAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILT 165 (382)
T ss_pred HHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 346789999999999999887654 6666666664 4678888888889999999999999888888899999998765
Q ss_pred HHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccc
Q 016515 89 VPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKL 168 (388)
Q Consensus 89 i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
+...+... ...++|+|+ +++.++ ++..
T Consensus 166 ~~~~~~~~-~~~~~~~~~----~~~~~~-----------------------------~~~~------------------- 192 (382)
T TIGR00902 166 AGLAFMLI-GFLIKPTIP----PKDAIP-----------------------------EDES------------------- 192 (382)
T ss_pred HHHHHHHH-HHHcCCCCC----CCcccc-----------------------------cccc-------------------
Confidence 54332222 223344321 000000 0000
Q ss_pred cccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHH
Q 016515 169 KSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGL 248 (388)
Q Consensus 169 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (388)
......+.+++++......+...........++. +....+. +.. .+. ...-....+..+.++++.
T Consensus 193 -~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~--~~~~~l~-~~g----------~s~-~~~g~l~~~~~~~~i~~~ 257 (382)
T TIGR00902 193 -QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYG--FSAIYWQ-AAG----------ISA-SATGLLWGIGVLAEIIIF 257 (382)
T ss_pred -ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-HCC----------CCH-hHHHHHHHHHHHHHHHHH
Confidence 0000112222222111111111111111111221 1111121 100 011 111122334566778888
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHH
Q 016515 249 ILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSL 328 (388)
Q Consensus 249 ~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~ 328 (388)
.+.+++.||+|+|+.+..+.....+.+......++.+........-.+......+....+..+. |++.|+++.++.+..
T Consensus 258 ~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~ 336 (382)
T TIGR00902 258 AFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNAL 336 (382)
T ss_pred HHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHH
Confidence 9999999999999999888877776665554433332222222222222222233344566777 999999999998754
Q ss_pred -HhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 016515 329 -GKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 365 (388)
Q Consensus 329 -~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 365 (388)
..+|..++|.+.+.+.+..+ ...+++.+++.+++.+
T Consensus 337 ~~g~g~~~g~~~~G~l~~~~g-~~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIYPTLG-AGTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHH
Confidence 45888889999999888765 3456666666655543
No 74
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.68 E-value=4.5e-15 Score=134.41 Aligned_cols=293 Identities=17% Similarity=0.192 Sum_probs=170.9
Q ss_pred hhhhhcC---ccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc---h
Q 016515 7 GLLSSFS---PNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN---W 80 (388)
Q Consensus 7 ~~l~~~~---~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~---W 80 (388)
.+..+++ ++++++++.+++.|++-|...+..+++++|+||+++|.+.+++. .-.+|..+...++-.+....+ |
T Consensus 93 ~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w 171 (417)
T COG2223 93 CLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAW 171 (417)
T ss_pred HHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHH
Confidence 3444444 44569999999999997776777889999999999999999987 666676665555544444456 9
Q ss_pred HHHHHHhhHHHHHH-HHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccc
Q 016515 81 RWLLAFSSVPSFAL-LLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLS 159 (388)
Q Consensus 81 R~~f~~~~i~~l~~-~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (388)
|....+-.++.++. +..++.+.|.|+...++++.. .
T Consensus 172 ~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~----------------------------~--------------- 208 (417)
T COG2223 172 RNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL----------------------------P--------------- 208 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc----------------------------h---------------
Confidence 99887766665553 455666777665311000000 0
Q ss_pred ccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 160 MTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
...+..+++ +.++.+...++.+.-++-++..+.+.+.+. ++..+.. +.-.....
T Consensus 209 -------------~~~~~v~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~---------~fg~~~~-~Ag~~a~~ 262 (417)
T COG2223 209 -------------AQLKAVFSN---KDTWLLSLLYFATFGGFVGFSAYLPMYLVT---------QFGLSPV-TAGLIAFL 262 (417)
T ss_pred -------------hHHHHHhcC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hcCCChh-hHHHHHHH
Confidence 001111111 112233334444333333332222222110 0101111 10011111
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc------hhHHHHHHHHHHH-Hhhhcccceeeeecccc
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ------SAVVTTVLLFGVR-MCVTGTITVATIYAPEI 312 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~El 312 (388)
..+.+...-.++|+++||+|.||+++.....+.++........ .........+... .+........+.+.+..
T Consensus 263 f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~i 342 (417)
T COG2223 263 FPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVI 342 (417)
T ss_pred HHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHH
Confidence 2222333345789999999988888777766666555544321 1122222222222 23233334678889999
Q ss_pred cccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHhhcc
Q 016515 313 YPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
||. .-+...|+...+|.+|++.-|...+...+.++ ....+.++..+.+++.+..+..
T Consensus 343 f~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 343 FPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 987 46778999999999999999999998888776 3455677777777777766543
No 75
>PRK10133 L-fucose transporter; Provisional
Probab=99.67 E-value=5e-14 Score=134.77 Aligned_cols=283 Identities=11% Similarity=0.049 Sum_probs=153.0
Q ss_pred hhhhhhh---hcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh-c--
Q 016515 4 SVAGLLS---SFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM-T-- 76 (388)
Q Consensus 4 ~i~~~l~---~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~-~-- 76 (388)
++++++. +++++++.++++|+++|+|.|.. +....++.|+.|+++|++..+..+..+.+|..+++.++..+. .
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4555443 57899999999999999999875 566778889877777777788899999999999988765432 0
Q ss_pred -----------------c------cchHHHHHHhh-HHHHHHH-HHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCC
Q 016515 77 -----------------R------LNWRWLLAFSS-VPSFALL-LFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTK 131 (388)
Q Consensus 77 -----------------~------~~WR~~f~~~~-i~~l~~~-~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~ 131 (388)
. .+||++|+... +..++.+ +....+||.|. +++. +
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~~----------------~ 241 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----DNHS----------------D 241 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----cccc----------------c
Confidence 0 25777775433 3332322 22334555221 0000 0
Q ss_pred CCCCccccchhhhhhhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 016515 132 LPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKL 211 (388)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (388)
++.. ......+.+++++......+..+.+.......+. +..+.+
T Consensus 242 --------------~~~~--------------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~l 285 (438)
T PRK10133 242 --------------AKQG--------------------SFSASLSRLARIRHWRWAVLAQFCYVGAQTACWS--YLIRYA 285 (438)
T ss_pred --------------cccc--------------------chhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 0000 0000111222222211111111111111111111 111111
Q ss_pred cCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHH
Q 016515 212 SSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLL 291 (388)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (388)
.++. .+ .+....-.......++..+|.++++++.||+|||+++..+..++...++........ ......
T Consensus 286 ~~~~-------~g---~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 354 (438)
T PRK10133 286 VEEI-------PG---MTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIAL 354 (438)
T ss_pred hhhc-------CC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHH
Confidence 1100 00 111111222345566778999999999999999998877766554433332222221 122222
Q ss_pred HHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-hhHHHHH
Q 016515 292 FGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVIL 355 (388)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-~~~~~~i 355 (388)
....++....++..+....|.+|.+ .+++.++.. ...+|+.+.|.+.+.+.+..+ ....+++
T Consensus 355 ~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v 417 (438)
T PRK10133 355 TLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELI 417 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHH
Confidence 3334455566677778888888764 567777775 455678888888887767654 3344443
No 76
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.65 E-value=1.2e-13 Score=130.91 Aligned_cols=261 Identities=12% Similarity=0.085 Sum_probs=156.3
Q ss_pred CccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---------------
Q 016515 13 SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT--------------- 76 (388)
Q Consensus 13 ~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~--------------- 76 (388)
.++++.+++.|++.|+|.|.. +...+++.|..|+++|++..+..+..+.+|..+++.++..+..
T Consensus 91 ~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~ 170 (410)
T TIGR00885 91 IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLS 170 (410)
T ss_pred hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcC
Confidence 568999999999999999975 6677899999999999999999999999999999888765531
Q ss_pred -----------ccchHHHHHHhhHHHHHHHHHH--hcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhh
Q 016515 77 -----------RLNWRWLLAFSSVPSFALLLFY--GLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAI 143 (388)
Q Consensus 77 -----------~~~WR~~f~~~~i~~l~~~~~~--~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 143 (388)
..+||++|.+.++..++..++. ...||.++ ++ + +
T Consensus 171 ~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~--~--------------~------------ 217 (410)
T TIGR00885 171 PEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----SD--A--------------K------------ 217 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cc--c--------------c------------
Confidence 1369999988877666543333 22444221 00 0 0
Q ss_pred hhhhhchhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCccc
Q 016515 144 KENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVL 223 (388)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (388)
+ ... + ...+.+++++......+..+.+.+.....+ .++........
T Consensus 218 ~-~~~----~-------------------~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~--s~l~~y~~~~~-------- 263 (410)
T TIGR00885 218 Q-ISF----S-------------------ASLSRLARIRHYREGVIAQFFYVGVQIMCW--TFIIQYAVRLI-------- 263 (410)
T ss_pred c-ccc----h-------------------hhHHHHHhChhHHHHHHHHHHHHHHHHHHH--HHHHHHHhhcc--------
Confidence 0 000 0 000111222211111111122222221111 11111111000
Q ss_pred ccCCCCC-chhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhccc
Q 016515 224 HADKSKD-NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTI 302 (388)
Q Consensus 224 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (388)
.....+ ...+.. .......+|.++++++.||+++|+.+..+..++.++.+......+.. .........++....+
T Consensus 264 -~~~~~~~a~~~~~--~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s~~f 339 (410)
T TIGR00885 264 -PGMTAGFAANYNI--GAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMSLMF 339 (410)
T ss_pred -CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 000101 111111 12244578899999999999999988777766666555444433322 2233333345556677
Q ss_pred ceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 303 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 303 ~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
+..+....+.++++.+..+.+++..+ +|+.+.|.+.+.+.|.
T Consensus 340 p~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 340 PTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHH
Confidence 88888999999998887777777766 9999999999988874
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=6.7e-14 Score=133.16 Aligned_cols=141 Identities=9% Similarity=0.120 Sum_probs=94.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-hh---HHHHHHHHHHHHhhhcccceeeeecccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-SA---VVTTVLLFGVRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~El 312 (388)
..+..+..+++.+..+++.||+|||++++.+.+...+......... .. +......+..........+....+.+|.
T Consensus 257 ~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~ 336 (418)
T TIGR00889 257 MSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKE 336 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566788889999999999999999888776665543333321 11 1111111122222222234445678999
Q ss_pred cccchhhHHHHHHH-HHHhHhHhHHHHHHHHhhcccc------hhHHHHHHHHHHHHHHHHhhcccccccCc
Q 016515 313 YPTSARTTGFGVAS-SLGKVGGMVCPLVAVGLVTSCH------LRLAVILFEVVFVLAIASSLLFPFETMGR 377 (388)
Q Consensus 313 ~p~~~R~~~~~~~~-~~~~i~~~~~p~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~pet~~~ 377 (388)
+|++.|+++.|+.+ ....+|+.++|.+.+.+.+..+ ....+.+.+++.+++.+..+++.||+.+.
T Consensus 337 ~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 337 VPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999997 4567899999999998877643 23456667777777777777777887543
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.64 E-value=1.6e-13 Score=129.30 Aligned_cols=281 Identities=12% Similarity=0.033 Sum_probs=151.8
Q ss_pred hcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhH
Q 016515 11 SFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSV 89 (388)
Q Consensus 11 ~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i 89 (388)
..+++++.+++.|++.|++.+.. +...++..++ +++|++..+.......+|..++++++..+.+.+|||..|++.++
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 34688999999999999987754 5555566665 34567767777778889999999999998888999999988776
Q ss_pred HHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccccccccccc
Q 016515 90 PSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLK 169 (388)
Q Consensus 90 ~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
..++..+...+.||.++ +++.+ + +. +
T Consensus 167 ~~~~~~~~~~~~~~~~~----~~~~~----------------------------~-~~-----~---------------- 192 (382)
T PRK11128 167 GVASMLLGQLLRPTIMP----QGESR----------------------------Q-QE-----S---------------- 192 (382)
T ss_pred HHHHHHHHHHccCCCCC----ccccc----------------------------c-cc-----c----------------
Confidence 54444333344454321 00000 0 00 0
Q ss_pred ccchhhhhhcchh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHH
Q 016515 170 SGFSSFFMLFSRK-LIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGL 248 (388)
Q Consensus 170 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (388)
+...+++++++++ .+.......+..... ..++. +....+. +. +. + ....-....+..+..++..
T Consensus 193 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~-~~~~~--~~~~~~~-~~--------g~--s-~~~~g~~~~~~~~~~~~~~ 257 (382)
T PRK11128 193 AGWPAWKALLKEPTVWRFLLCVSLLQGSH-AAYYG--FSAIYWQ-AA--------GY--S-ASTIGYLWSLGVVAEVLIF 257 (382)
T ss_pred cccchHHHHHcChhHHHHHHHHHHHHHHh-HhHHH--HHHHHHH-HC--------CC--C-HhHHHHHHHHHHHHHHHHH
Confidence 0001122333322 222111111111111 11111 1111111 00 00 1 1111112224455677888
Q ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHH
Q 016515 249 ILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSL 328 (388)
Q Consensus 249 ~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~ 328 (388)
++.+++.||+|+|+.+..+....++..+.....++.+......+...++.....+....+..+. |++.+++..++.+..
T Consensus 258 ~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 336 (382)
T PRK11128 258 AFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSAL 336 (382)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHH
Confidence 8899999999999998877766655544443333322222222222222111222233445565 555678888887755
Q ss_pred H-hHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Q 016515 329 G-KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAI 364 (388)
Q Consensus 329 ~-~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~ 364 (388)
+ .+|..++|.+.+.+.+..+. ..++..+++.+++.
T Consensus 337 ~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 337 AMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 4 45667899999988887653 34444444444443
No 79
>PRK10054 putative transporter; Provisional
Probab=99.63 E-value=5.1e-14 Score=133.08 Aligned_cols=293 Identities=13% Similarity=0.097 Sum_probs=163.0
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++.+++++++.++++|++.|.+.+.. +....+..|..|+++|++..++......+|..+++.++..+.. .+||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~ 162 (395)
T PRK10054 84 ASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINL 162 (395)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCc
Confidence 345566778899999999999998876654 5567788999999999999999999999999999998877653 69999
Q ss_pred HHHHhhHHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 83 LLAFSSVPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 83 ~f~~~~i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
.|.+.++..++..+ ..+++||+++ +++.++ + +. .
T Consensus 163 ~f~~~~~~~~i~~i~~~~~~~~~~~----~~~~~~-------------------------~---~~-----~-------- 197 (395)
T PRK10054 163 PFWLAAICSAFPLVFIQIWVQRSEK----AIATET-------------------------G---SV-----W-------- 197 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc----ccccch-------------------------h---hh-----h--------
Confidence 99988777665433 3344555431 000000 0 00 0
Q ss_pred ccccccccccchhhhhhcc-hhHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANV-FSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFI 239 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (388)
+.++.++ ++.+.......+..+... +..+...+... .. +. ..+ ..........
T Consensus 198 ------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~-~~----------~~~-~~~~g~~~~~ 252 (395)
T PRK10054 198 ------------SPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMV-VA-DS----------DFA-EKVVAVVLPV 252 (395)
T ss_pred ------------hhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHH-hc-cc----------chH-HHHHHHHHHh
Confidence 0001111 121111111111111110 10111111111 10 00 000 0111111222
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
..+...+.....+.+.||.+||+.+..+.....+....+... ++.+..........++.....+.......+..|++.|
T Consensus 253 ~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~ 332 (395)
T PRK10054 253 NAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMK 332 (395)
T ss_pred hhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccc
Confidence 223334455677889999999998877665444433333322 2222111222222222222233455678889999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhh
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSL 368 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 368 (388)
++..+.. +.+++|..++|.+.+.+.|..+....+++.+++..++.+...
T Consensus 333 ~~~~~~~-~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 333 ASYFSAQ-SLGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred eehHhHH-HHHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 9998865 467899999999999998876544445554444444443333
No 80
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.63 E-value=4e-13 Score=127.06 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=83.9
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
..++.++..++++++.+++.|+++|++.+.. +....+..|..|+++|++..+..+.+..+|..+++.++..+.+..+||
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~ 162 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWR 162 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 3556677778899999999999999998764 445567789999999999999999999999999999888877778999
Q ss_pred HHHHHhhHHHHHH-HHHHhcCCCCc
Q 016515 82 WLLAFSSVPSFAL-LLFYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~-~~~~~~~pESp 105 (388)
+.|++.++..++. ....++.||+|
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999887766544 34455678875
No 81
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.61 E-value=1.7e-13 Score=127.78 Aligned_cols=268 Identities=16% Similarity=0.160 Sum_probs=146.0
Q ss_pred hhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhccc--chH
Q 016515 5 VAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRL--NWR 81 (388)
Q Consensus 5 i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~--~WR 81 (388)
++.+.. .+++++.+++.|+++|++.|.. +....++.|+.| ++|+++.+..+....+|..+++.+...+.+.. +||
T Consensus 77 ~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~ 154 (355)
T TIGR00896 77 AGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQ 154 (355)
T ss_pred HHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 334444 6789999999999999998864 445567788886 68999999999999999999888876665443 499
Q ss_pred HHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccc
Q 016515 82 WLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMT 161 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
+.|.+.++..++... .++||+++ +.+ ++.+ .+ +
T Consensus 155 ~~f~~~~~~~~~~~~--~~~~~~~~------~~~--------------~~~~------------~~-----~-------- 187 (355)
T TIGR00896 155 QALAWWALPALLALL--AWIPQVRR------RVA--------------ANQT------------TT-----R-------- 187 (355)
T ss_pred HHHHHHHHHHHHHHH--HHhhhhcc------ccC--------------CCCC------------CC-----C--------
Confidence 998776655443322 23454321 000 0000 00 0
Q ss_pred ccccccccccchhhhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHH
Q 016515 162 RKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIA 240 (388)
Q Consensus 162 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (388)
. ..++.++ ++.+.. ..........++....+.+.+..+.. . + .........+.
T Consensus 188 --------~---~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~lp~~~~~~g--------~--~-~~~~g~~~~~~ 241 (355)
T TIGR00896 188 --------L---TPVRIWRSPLAWQV----TVFFGLQSGLYYSLIGWLPAILISHG--------A--S-AATAGSLLALM 241 (355)
T ss_pred --------C---CCchhhcCHhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHcC--------C--C-HHHHHHHHHHH
Confidence 0 0011111 111111 11111122222222222221111100 0 0 01111223445
Q ss_pred HhhhhHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecc-cccccchh
Q 016515 241 SLAELPGLILSAIIVDKI-GRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAP-EIYPTSAR 318 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~-gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-El~p~~~R 318 (388)
.++.+++.++.+++.||+ +||+.+..+..+..+....+.......... ......++....++....... +..|++.+
T Consensus 242 ~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~ 320 (355)
T TIGR00896 242 QLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQA 320 (355)
T ss_pred HHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHH
Confidence 667889999999999999 556555555444444333333221111111 111122222222333333444 34456778
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccc
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCH 348 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~ 348 (388)
++..++.+.++.+++.++|.+.+.+.+..+
T Consensus 321 g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 321 AALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998877654
No 82
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.59 E-value=2.4e-15 Score=137.33 Aligned_cols=102 Identities=23% Similarity=0.337 Sum_probs=86.2
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhccc-chH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRL-NWR 81 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~-~WR 81 (388)
.+++++++++..|+++.++|-+.|+|++.. |.+.+++++.+|..+|+++.++++.....|..+|.+.+..+.... .||
T Consensus 109 ~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr 188 (493)
T KOG1330|consen 109 TLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWR 188 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceE
Confidence 577889999999999999999999999986 788899999999999999999999999999888776666555433 399
Q ss_pred HHHHHhhHHHHHHHH-HHhcCCCCc
Q 016515 82 WLLAFSSVPSFALLL-FYGLAPESP 105 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~-~~~~~pESp 105 (388)
|.|...++.+++..+ ...+++|.+
T Consensus 189 ~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 189 WAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred EEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999998887644 456677744
No 83
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.56 E-value=2.5e-12 Score=117.22 Aligned_cols=272 Identities=13% Similarity=0.117 Sum_probs=156.3
Q ss_pred hcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-------------
Q 016515 11 SFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT------------- 76 (388)
Q Consensus 11 ~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~------------- 76 (388)
+...+|..+++.=++.|.|.+.. +.+.+|+++..|++++.+.+++.+.++++|.+++|.++..+..
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999974 7888999999999999999999999999999999999876542
Q ss_pred ---ccchHHHHHHhhHHHHHHHHH--HhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchh
Q 016515 77 ---RLNWRWLLAFSSVPSFALLLF--YGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNL 151 (388)
Q Consensus 77 ---~~~WR~~f~~~~i~~l~~~~~--~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (388)
..+||+++++.+...++..+. +..+||..+ +.++ +..+.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~---------------------------~~~~~--- 128 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA---------------------------RVSSG--- 128 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc---------------------------ccccc---
Confidence 147999988555443333222 333565321 0000 00000
Q ss_pred hhccccccccccccccccccchhhhhhcc-hhHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcCCCCCCCCcccccCCC
Q 016515 152 LRDTHMLSMTRKITDKLKSGFSSFFMLFS-RKLIRTTLLLWVLFFAN--VFSYYGAVLLTSKLSSGDNKCGSKVLHADKS 228 (388)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (388)
+. . + .+..++ +..... .+..+.+.+. .+..|...++... ... +. ..
T Consensus 129 --~~----------~-~------~~~~~~~~~~~l~-~~~~f~yvg~e~~~~~w~~~yl~~~-----~~~-----g~-s~ 177 (310)
T TIGR01272 129 --DT----------T-Q------KTSAFQFTHLVLG-ALGIFVYVGAEVSAGSFLVNFLSDP-----HAL-----GL-PE 177 (310)
T ss_pred --cc----------c-c------hhhHHhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc-----ccC-----CC-CH
Confidence 00 0 0 000111 111111 1111112211 1222222222110 000 00 01
Q ss_pred CCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeee
Q 016515 229 KDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIY 308 (388)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (388)
.+.. ........+..+|.++++++.||+|+|+.+..+..++.+..+......... .........++....++.....
T Consensus 178 ~~a~--~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~ 254 (310)
T TIGR01272 178 DQAA--HFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSL 254 (310)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 112333445678999999999999998887766655555443333222221 1222223335555666777777
Q ss_pred cccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHH
Q 016515 309 APEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVI 354 (388)
Q Consensus 309 ~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~ 354 (388)
..+.+|.+ .+++.++. ..+.+|+.+.|.+.+.+.|..+...+++
T Consensus 255 a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 255 ALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 88888765 45666664 6788999999999998877665544443
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.55 E-value=9.5e-13 Score=125.61 Aligned_cols=135 Identities=13% Similarity=0.107 Sum_probs=87.1
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
+..+...++.++.+++.||+|||+.+..+..+.++......+..+.+......................+.+|.+|++.|
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 349 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLS 349 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccce
Confidence 34556678899999999999999988776665555444443333332222211111111111122344678899999999
Q ss_pred hHHHHH-HHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccc
Q 016515 319 TTGFGV-ASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 373 (388)
Q Consensus 319 ~~~~~~-~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pe 373 (388)
+++.+. .+..+.+|+.++|.+.+.+.+..+....+.+.+++.++..++.++..++
T Consensus 350 a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 350 ATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998776 4566789999999999998887665566776677766665555554433
No 85
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.54 E-value=4e-12 Score=120.08 Aligned_cols=276 Identities=15% Similarity=0.006 Sum_probs=144.8
Q ss_pred HHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHHHHHHHH
Q 016515 20 VIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFY 98 (388)
Q Consensus 20 ~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l~~~~~~ 98 (388)
...-++.++..... +....+..|..++++|+...+....+..+|.++++.....+.+..|||..|++.++..++..+..
T Consensus 101 ~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 101 VGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333 44556778999999999888888888899999998877777778899999999887766654444
Q ss_pred hcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccccchhhhhh
Q 016515 99 GLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFML 178 (388)
Q Consensus 99 ~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 178 (388)
.+++|.++ ++.++. + + + ....+++
T Consensus 181 ~~~~~~~~-----~~~~~~------------------------~-~--~------------------------~~~~~~~ 204 (390)
T TIGR02718 181 LWLKDRAV-----ASPEAP------------------------L-A--R------------------------RASLFRF 204 (390)
T ss_pred HHcCCCCc-----Cccccc------------------------h-h--h------------------------HHHHHHH
Confidence 44443321 000000 0 0 0 0011222
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHH-hhhhHHHHHHHHHHHH
Q 016515 179 FSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIAS-LAELPGLILSAIIVDK 257 (388)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~d~ 257 (388)
++++..+...............++. +....+.+ .+ .+. ...-......+ ...+++.++.+++.||
T Consensus 205 l~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~l~~-~G----------~s~-~~ig~~~~~~~~~~~~~g~~~~g~l~~r 270 (390)
T TIGR02718 205 FRRPLAWSLLALALLSAMTAVSGFG--LSKLYLVD-AG----------WPL-EWIGRLGMAGGAVTVLLGCGGGAWLVRR 270 (390)
T ss_pred HcCcCHHHHHHHHHHHHHHHHHHHH--HhhHHHHh-cC----------CCH-HHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222111112222 11111211 00 010 11111111222 3446778899999999
Q ss_pred hchhHHHHHHHHHHHHH-HHHHhhhc----hhHHHHHHHHHH-HHhhhcccceeeeeccccccc-chhhHHHHHHHHHHh
Q 016515 258 IGRKLSMVLMFVSACIF-LLPLVFHQ----SAVVTTVLLFGV-RMCVTGTITVATIYAPEIYPT-SARTTGFGVASSLGK 330 (388)
Q Consensus 258 ~gRr~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~El~p~-~~R~~~~~~~~~~~~ 330 (388)
+|+|+.+..+.....+. ........ ............ .+......+..+....+..++ +.++++.++.+++..
T Consensus 271 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 350 (390)
T TIGR02718 271 AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRD 350 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 99999887665544221 11111111 111111111111 111111223334444455555 899999999999999
Q ss_pred HhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 016515 331 VGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 365 (388)
Q Consensus 331 i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 365 (388)
+|+.++|.+.+.+.+..+....+...+++.+++.+
T Consensus 351 lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 351 LGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999888766544555555555555443
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.50 E-value=6.7e-12 Score=118.80 Aligned_cols=132 Identities=12% Similarity=0.126 Sum_probs=85.1
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.+..+...++.+..+++.||+|||+.++.+..+.++.........+.+......+....+..........+..|..|++.
T Consensus 261 ~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 340 (396)
T TIGR00882 261 TMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL 340 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce
Confidence 33455667788889999999999998877666555443333333332222222222112211111233446788899999
Q ss_pred hhHHHHH-HHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhc
Q 016515 318 RTTGFGV-ASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 369 (388)
Q Consensus 318 R~~~~~~-~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 369 (388)
|+++.+. .+....+|+.++|.+.+.+.+..+....+.+.+++.++..+...+
T Consensus 341 ~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 341 SATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred EEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9998877 466778999999999999988766666777777776666655544
No 87
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.47 E-value=8.9e-11 Score=112.54 Aligned_cols=146 Identities=20% Similarity=0.286 Sum_probs=95.5
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHhchh--HHHHHHHHHHHHH-HHHHh-h------hchhHHHHHHHHHHHHhhhccc
Q 016515 233 LYVDVFIASLAELPGLILSAIIVDKIGRK--LSMVLMFVSACIF-LLPLV-F------HQSAVVTTVLLFGVRMCVTGTI 302 (388)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~d~~gRr--~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~ 302 (388)
.....++..+.+++|+++.+++.||+|.| ++++.+.+...++ ...+. + ..+.+...++......+..+..
T Consensus 319 l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~q 398 (477)
T PF11700_consen 319 LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQ 398 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHH
Confidence 33445667788899999999999999988 6666555444222 22222 0 1222221122222223334445
Q ss_pred ceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchh-HHHHHHHHHHHHHHHHhhcccccccCcch
Q 016515 303 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR-LAVILFEVVFVLAIASSLLFPFETMGREL 379 (388)
Q Consensus 303 ~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~pet~~~~l 379 (388)
+..-++.+|+.|+...+.-.|+....++..++++|.+.+.+.+.++.. ..++...++.+++.+ .++.+++.+++..
T Consensus 399 s~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~-ll~~v~~~~g~~~ 475 (477)
T PF11700_consen 399 SASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLI-LLFFVDVEKGRED 475 (477)
T ss_pred HHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH-HHhhccchhhhhc
Confidence 667789999999999999999999999999999999999888876643 334434444445544 4455666666543
No 88
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.47 E-value=7.8e-13 Score=127.39 Aligned_cols=344 Identities=17% Similarity=0.194 Sum_probs=179.5
Q ss_pred hhhhhhhhhhcCccHHHHHH-HHHHhhccCcchh-hHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 016515 2 VTSVAGLLSSFSPNYVSLVI-FRCFVGVGLGGVP-VFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN 79 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~l~~-~R~l~G~~~g~~~-~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~ 79 (388)
+.+++-+++.|+++++++++ .=++.|+|.|... .+...+..++ +|+|+.+.++...+.++|..+-+++...+.+..|
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 45778888899999988666 6677889998753 4444555555 5679999999999999999999999988888999
Q ss_pred hHHHHHHhhHHHHHHHHH-HhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhc---c
Q 016515 80 WRWLLAFSSVPSFALLLF-YGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRD---T 155 (388)
Q Consensus 80 WR~~f~~~~i~~l~~~~~-~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 155 (388)
||..+++.+...+-.+.. ...-|.+|+- +.+.++.++..++. .+..+.. .+.+..+......+ .
T Consensus 199 ~r~~~l~~~~~~l~~~~~~~~~rp~~~~~---~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~~~~~~~~~~~~~ 266 (509)
T KOG2504|consen 199 WRGALLIFGGISLNVLVAGALLRPLSPPK---KPNEEKDLRNSAAS-----VESTPKP----VELRISERDSGLKKLSLS 266 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCCcCC---Cchhhhhhcccccc-----ccccccc----cccccccCCCCCCccccc
Confidence 999988877766544333 2333433321 11111111110000 0000000 00000000000000 0
Q ss_pred cccccccc-ccccccccchhhhhhcchhHHH-HHHHHHH-HHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCch
Q 016515 156 HMLSMTRK-ITDKLKSGFSSFFMLFSRKLIR-TTLLLWV-LFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNS 232 (388)
Q Consensus 156 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (388)
+.....+. .+.+........ .++..+..+ +..+++. ......+.++...+..+...... ...+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~-----------g~~~~~ 334 (509)
T KOG2504|consen 267 NLATLKRGPDKWRNSPLQAFL-SMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSL-----------GLSSND 334 (509)
T ss_pred chhhhhhCCccccccchhhhh-hhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------CCChhh
Confidence 00000000 000000000000 011111111 1111111 12223333333333333332110 011112
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHHHhc--hhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecc
Q 016515 233 LYVDVFIASLAELPGLILSAIIVDKIG--RKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAP 310 (388)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~d~~g--Rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
......+.++..++|-++.|++.|+-. ++.....+.+++++.........+.+..........++.....+....+..
T Consensus 335 aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~ 414 (509)
T KOG2504|consen 335 AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILV 414 (509)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222344557778999999999999987 344445555555554433223333222222211122222222334456889
Q ss_pred cccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchh-HHHHHHHHHHHHHHHHhhcc
Q 016515 311 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR-LAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 311 El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 370 (388)
|+.+.+.=+.+.|+...+..++..++|.+.+.+.|.++.+ ..+...+++.++++++.++.
T Consensus 415 ~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 415 DLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred HHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 9999999999999999999999999999999888876643 34455556666666555544
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.44 E-value=4.5e-11 Score=115.59 Aligned_cols=91 Identities=11% Similarity=0.012 Sum_probs=76.6
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCc---hhhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH---RGRWMVALSAFWTAGTIFEASLAWVVMTRL 78 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~ 78 (388)
.+++.++.+++++++.++++|++.|++.|.. +...++++|+.|+++ |+...+++.....+|..+++.++..+.+..
T Consensus 89 ~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 89 LMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566677788888999999999999999875 677788999998764 888889999999999999999988887778
Q ss_pred chHHHHHHhhHHHHH
Q 016515 79 NWRWLLAFSSVPSFA 93 (388)
Q Consensus 79 ~WR~~f~~~~i~~l~ 93 (388)
+||+.|.+.++..++
T Consensus 169 g~~~~f~~~~~~~~~ 183 (475)
T TIGR00924 169 GYHVGFNLAAVGMVI 183 (475)
T ss_pred ChHHHHHHHHHHHHH
Confidence 999999887754433
No 90
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.42 E-value=1e-10 Score=113.41 Aligned_cols=297 Identities=15% Similarity=0.100 Sum_probs=174.4
Q ss_pred ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHH
Q 016515 14 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSF 92 (388)
Q Consensus 14 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l 92 (388)
.+.+.+++.-++.|++.+.. |+-.+.+.|..|+++...++++.+..+.++.++||.+++.+....|=.+.|.+.++--+
T Consensus 101 ~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl 180 (524)
T PF05977_consen 101 LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFL 180 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999998765 77788999999999999999999999999999999999888777788888888776544
Q ss_pred HHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccccc
Q 016515 93 ALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGF 172 (388)
Q Consensus 93 ~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (388)
+........+..++ +++ .+ + +... ++ -.
T Consensus 181 ~~i~~l~~~~~~~~----~~~------------------~~----------~-e~~~---~~----------------l~ 208 (524)
T PF05977_consen 181 ISILALLRWKPPPP----PSS------------------LP----------R-ERFF---SA----------------LR 208 (524)
T ss_pred HHHHHHHHcccccc----ccc------------------cc----------h-hhhh---hh----------------HH
Confidence 33332222221110 000 00 0 0000 00 00
Q ss_pred hhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHHHHH
Q 016515 173 SSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSA 252 (388)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
..++...+.+..+..++...........++. ..+.+..+ ..+ .......+.....+++.++|+++.+
T Consensus 209 ~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~a---LlPl~a~~-------~l~---~~a~~yGll~a~~gvGai~Gal~~~ 275 (524)
T PF05977_consen 209 EGLRYVRSSPPLRSVLLRSFLFNLFASAVWA---LLPLFARD-------VLG---GGASGYGLLLAAFGVGAILGALLLP 275 (524)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHhhhHHHH---hhhHHHHH-------HhC---CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122233333333333222211111111111 11111100 000 0011112233445667788888888
Q ss_pred HHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHh
Q 016515 253 IIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVG 332 (388)
Q Consensus 253 ~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~ 332 (388)
.+.+|+++++.+..+.+..+++.+.+....+.+.....++...++.....+...+..-+..|.++||+..++...+...+
T Consensus 276 ~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~ 355 (524)
T PF05977_consen 276 RLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGG 355 (524)
T ss_pred HhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHH
Confidence 88888888887777777666666665554444443333443333333333445567788999999999999999988887
Q ss_pred HhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc-ccccc
Q 016515 333 GMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF-PFETM 375 (388)
Q Consensus 333 ~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~pet~ 375 (388)
..++..+.+.+.+..+....+.+.++..+++.++.... .|+.+
T Consensus 356 ~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~~~ 399 (524)
T PF05977_consen 356 MPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQGE 399 (524)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 77888888887776666655555555444554444432 34444
No 91
>PTZ00207 hypothetical protein; Provisional
Probab=99.41 E-value=5.6e-11 Score=115.76 Aligned_cols=120 Identities=15% Similarity=0.130 Sum_probs=87.3
Q ss_pred hhhhhhhhhcC------ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 016515 3 TSVAGLLSSFS------PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM 75 (388)
Q Consensus 3 ~~i~~~l~~~~------~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~ 75 (388)
.+++.++++++ ++++.++++|+++|+|.+.. +.....+.+|+| ++||++.++...+..+|..+.+.+...+.
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777776 78999999999999998764 555667789997 68999999999999999986555544433
Q ss_pred cccchHHHHHHhhHHHHHH-HHHH--hcCCCCchHHHhccChHHHHHHHHHH
Q 016515 76 TRLNWRWLLAFSSVPSFAL-LLFY--GLAPESPRYLCAKARTVDAHRILEKM 124 (388)
Q Consensus 76 ~~~~WR~~f~~~~i~~l~~-~~~~--~~~pESp~~l~~~~~~~~a~~~l~~~ 124 (388)
. .+|+..|++.++.+++. ++.. ...||+|+|...++|.+|+++.+++.
T Consensus 180 ~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~ 230 (591)
T PTZ00207 180 S-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLM 230 (591)
T ss_pred H-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhh
Confidence 2 47888887777665544 2222 34678888876776666666665443
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.40 E-value=1.4e-10 Score=112.48 Aligned_cols=94 Identities=20% Similarity=0.254 Sum_probs=73.3
Q ss_pred hhhhhhhhhhcCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 2 VTSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 2 ~~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
+..+++++++-++|..+++++-.+.|+|.|........++|..|.|+|+....+...........++.++..+..+.+||
T Consensus 117 l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WR 196 (599)
T PF06609_consen 117 LGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWR 196 (599)
T ss_pred HHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcc
Confidence 46789999999999999999999999998765544555799999999987776666555555555666666666677999
Q ss_pred HHHHHhhHHHHHHH
Q 016515 82 WLLAFSSVPSFALL 95 (388)
Q Consensus 82 ~~f~~~~i~~l~~~ 95 (388)
|.|++..+...+.+
T Consensus 197 w~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 197 WIFYIFIIWSGIAL 210 (599)
T ss_pred hHHHHHHHHHHHHH
Confidence 99999887655443
No 93
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.40 E-value=1.2e-10 Score=112.84 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=72.7
Q ss_pred hhhhhhhhhcCccHHH-HHHHHHHhhccCcch-hhHHHHHHhhcccC--chhhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 016515 3 TSVAGLLSSFSPNYVS-LVIFRCFVGVGLGGV-PVFLAYFLEFVPVS--HRGRWMVALSAFWTAGTIFEASLAWVVMTRL 78 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~-l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~ 78 (388)
..+++++++++++... ++++|+++|+|.|.. +...+++.|++|++ +|++..+.+..+..+|..+++.++.++.+..
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567777788776554 558999999999975 67778999999987 4577788899999999999999998888889
Q ss_pred chHHHHHHhhHH
Q 016515 79 NWRWLLAFSSVP 90 (388)
Q Consensus 79 ~WR~~f~~~~i~ 90 (388)
|||+.|++..+.
T Consensus 171 gw~~~F~i~~i~ 182 (489)
T PRK10207 171 GYSVTYNLCGAG 182 (489)
T ss_pred ChHHHHHHHHHH
Confidence 999999987553
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.39 E-value=8.9e-12 Score=116.31 Aligned_cols=102 Identities=14% Similarity=0.156 Sum_probs=85.0
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++++++++++..+.+.|++.|++.|+..+...|+..|+|+++|+++.++...+..+|.+++++++.. ...+|||.
T Consensus 102 Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~ 180 (511)
T TIGR00806 102 FVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWIS 180 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchh
Confidence 47788899999999999999999999999866667899999999999999999999999999999999888 55789998
Q ss_pred HHHHhhH---HHHHHHHHHhcCCCCc
Q 016515 83 LLAFSSV---PSFALLLFYGLAPESP 105 (388)
Q Consensus 83 ~f~~~~i---~~l~~~~~~~~~pESp 105 (388)
.+.+.-+ ...+.+++.+++|-.+
T Consensus 181 y~~Ln~Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 181 YSTLNIISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 7654432 3334566677888433
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.37 E-value=7.9e-11 Score=114.59 Aligned_cols=90 Identities=12% Similarity=0.063 Sum_probs=70.4
Q ss_pred hhhhhhhhcCc-cHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCc--hhhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 016515 4 SVAGLLSSFSP-NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH--RGRWMVALSAFWTAGTIFEASLAWVVMTRLN 79 (388)
Q Consensus 4 ~i~~~l~~~~~-~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~--Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~ 79 (388)
.++.++.++++ +...+.++|+++|++.|.. +...+++.|++|+++ |+...++++.+..+|..+++.++.++.+..|
T Consensus 99 ~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g 178 (500)
T PRK09584 99 AIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG 178 (500)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 44566666764 5667888999999998865 666678999998654 4456677888999999999999988888889
Q ss_pred hHHHHHHhhHHHHH
Q 016515 80 WRWLLAFSSVPSFA 93 (388)
Q Consensus 80 WR~~f~~~~i~~l~ 93 (388)
||+.|.+.++..++
T Consensus 179 ~~~~F~i~~i~~~i 192 (500)
T PRK09584 179 WSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988764433
No 96
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.36 E-value=2.6e-11 Score=116.92 Aligned_cols=308 Identities=10% Similarity=0.056 Sum_probs=156.7
Q ss_pred CccHHHHH-HHHHHhhccCcch-hhHHHHHHhhcccCchhhHH---HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHh
Q 016515 13 SPNYVSLV-IFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWM---VALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFS 87 (388)
Q Consensus 13 ~~~~~~l~-~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~---~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~ 87 (388)
.++...+. +++++.+++.+.. ...-.+..|..+ +++.... +.......+|.++++.++..+.+..+||..|++.
T Consensus 116 ~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~ 194 (468)
T TIGR00788 116 KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLIT 194 (468)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHH
Confidence 35544444 4888898887765 566788999988 4443332 3333334479999999888888888999999888
Q ss_pred hHHHHHHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccccccccc
Q 016515 88 SVPSFALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDK 167 (388)
Q Consensus 88 ~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
++..++..+...++||.+.....+.+ ++... + ......... + .
T Consensus 195 a~l~ll~~~~~~~~~E~~~~~~~~~~-~~~~~--------~-----------~~~~~~~~~-~----------------~ 237 (468)
T TIGR00788 195 AALLLLQLFVSNLSKERRAFVRPRIG-TYLEM--------N-----------MALLTLGVL-A----------------N 237 (468)
T ss_pred HHHHHHHHHHHHhccccccccccccc-ccchh--------h-----------hhhhhhhHH-H----------------H
Confidence 77766666666778886421000000 00000 0 000000000 0 0
Q ss_pred ccccchhhhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhH
Q 016515 168 LKSGFSSFFMLFS-RKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELP 246 (388)
Q Consensus 168 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (388)
.+.........++ +..++...+..+.+. .. .+ .....+. ......+. + ...........+++.++
T Consensus 238 ~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~~---~~--~~~~~f~-----~~~~~lG~--s-~~~~G~~~~~~~v~~i~ 303 (468)
T TIGR00788 238 VKVQILGLRGAIQLLEIAKPLIFIFLSYA-NL---PG--ASGSVFC-----ATTQCLPG--G-PSFSGMSKVVGNLGSLC 303 (468)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHh-hc---CC--CCceeEE-----EEcccCCC--C-cchhhhHHHHHHHHHHH
Confidence 0000011111222 222221111111000 00 00 0000000 00000011 1 11122233445677788
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-h---------chhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 247 GLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-H---------QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 247 ~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
+..+.+.+.+|++.|+.+..+.+...+..+.... . .+.+..........+.....+.....+..++.|++
T Consensus 304 g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~ 383 (468)
T TIGR00788 304 GVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSG 383 (468)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCC
Confidence 8888888889999999888777766554432210 0 11111111111111221222234567899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-----hh---HHHHHHHHHHHHHHHHhhccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-----LR---LAVILFEVVFVLAIASSLLFPFE 373 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-----~~---~~~~i~~~~~~~~~~~~~~~~pe 373 (388)
.+++..|+.+++..+|+.+++.+.+.+.+..+ .+ ....+..++.++....+. ++|+
T Consensus 384 ~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~-llP~ 447 (468)
T TIGR00788 384 CESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLH-LLPR 447 (468)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 99999999999999999999987776665433 12 222333444455555454 4564
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=99.34 E-value=9.3e-10 Score=105.81 Aligned_cols=106 Identities=14% Similarity=0.046 Sum_probs=67.0
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh-hh-chhHHHHHHHHHHHHhhhcccceeeeecccccc----
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV-FH-QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP---- 314 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p---- 314 (388)
.+..+++..+.+++.||+|||+.+..+..+..+....+. .. ++.+......+...++.....+..+.+.+|..+
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~ 353 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEK 353 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 455677888889999999999988776654443222222 22 222222222222233333444667888888876
Q ss_pred ---cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 315 ---TSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 315 ---~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
.+..+...|+.+.+..+|..++|.+.+.+.+.
T Consensus 354 ~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 354 RSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred hcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667888888889999998888776654
No 98
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.32 E-value=5.4e-11 Score=118.54 Aligned_cols=89 Identities=12% Similarity=0.243 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhccc----------------
Q 016515 16 YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRL---------------- 78 (388)
Q Consensus 16 ~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~---------------- 78 (388)
+..++++|+++|+|.+.. +...+|+.|++|+++|+++.++.+....+|..++++++..+.+.+
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~ 251 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPT 251 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCC
Confidence 567889999999999875 667789999999999999999999999999999998887765321
Q ss_pred ------chHHHHHHhhHHHHHHHHHHhcCCCC
Q 016515 79 ------NWRWLLAFSSVPSFALLLFYGLAPES 104 (388)
Q Consensus 79 ------~WR~~f~~~~i~~l~~~~~~~~~pES 104 (388)
+||..|++.++.+++..+.++++||.
T Consensus 252 dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 252 DPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 38888988888877765555666654
No 99
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.31 E-value=1.8e-11 Score=109.99 Aligned_cols=99 Identities=17% Similarity=0.155 Sum_probs=86.2
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCc-hhhHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH-RGRWMVALSAFWTAGTIFEASLAWVVMTRLNWR 81 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~-Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR 81 (388)
...+++-+|..+++++++.|.+||+|.+.. .+..+++++.+|.++ ||++++..-.+.++|.+++|+.+.++-+..|.+
T Consensus 147 f~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~ 226 (464)
T KOG3764|consen 147 FLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKS 226 (464)
T ss_pred HHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCc
Confidence 456778889999999999999999998765 466788999999865 799999999999999999999999988889999
Q ss_pred HHHHHhhHHHHHHHHHHhcCC
Q 016515 82 WLLAFSSVPSFALLLFYGLAP 102 (388)
Q Consensus 82 ~~f~~~~i~~l~~~~~~~~~p 102 (388)
.+|.+.++..++-..+.+++-
T Consensus 227 aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 227 APFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred CcHHHHHHHHHHHHHHHHhee
Confidence 999999998888766665543
No 100
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.26 E-value=9.3e-11 Score=93.25 Aligned_cols=134 Identities=17% Similarity=0.214 Sum_probs=95.7
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
.++.+++....+++.||+|||+.+..+.....+..+......+.+......+...++.....+..+.+..|.+|++.|++
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGV 87 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhH
Confidence 34567788889999999999998887776665555444433333222222333333333344567778999999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
+.++.+....++..++|.+.+.+.+..+....+.+...+.+++.+..++..|||
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999888877655544566667777777777777777765
No 101
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=2.3e-10 Score=102.47 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=76.0
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc---ccc-
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT---RLN- 79 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~---~~~- 79 (388)
+++-++-+++.||..++..|++.|+.-|...+.-++++|+.++++|+..++.++..+++|.++||.++.++.+ ..|
T Consensus 109 a~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~ 188 (451)
T KOG2615|consen 109 ALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGS 188 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhcc
Confidence 4555667889999777777999999999877778899999999999999999999999999999999877654 111
Q ss_pred -h-HHHHHHhhHHHHH-HHHHHhcCCCC
Q 016515 80 -W-RWLLAFSSVPSFA-LLLFYGLAPES 104 (388)
Q Consensus 80 -W-R~~f~~~~i~~l~-~~~~~~~~pES 104 (388)
| -.+-++..+.... .....+++|||
T Consensus 189 ~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 189 YPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 1 1112222333333 34566789998
No 102
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.24 E-value=4.8e-10 Score=106.64 Aligned_cols=139 Identities=13% Similarity=0.015 Sum_probs=95.7
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
....++..++.+..|++.||+|||+++..+.++.++..+......+........+...++.....+....+.+|.+|++.
T Consensus 50 s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 129 (412)
T TIGR02332 50 TLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF 129 (412)
T ss_pred HHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH
Confidence 34455667888899999999999999888877766655555444333333333333333333334555567899999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcc------cchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTS------CHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
|+++.++.+....+|..++|.+.+++.+. .+....+.+.++..++..++.+++.||++.
T Consensus 130 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 130 RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 99999999999899999999888776532 234455666666666665666666788763
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.21 E-value=2.4e-09 Score=102.27 Aligned_cols=139 Identities=11% Similarity=-0.046 Sum_probs=84.2
Q ss_pred HHHHhhhhHHHHHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHhhhch---------------------hHHHHHHHHHHH
Q 016515 238 FIASLAELPGLILSAIIVDKIG-RKLSMVLMFVSACIFLLPLVFHQS---------------------AVVTTVLLFGVR 295 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~g-Rr~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~ 295 (388)
.+.++...+.+++--.+.+|+| ||+....+.++.++++....+... .+...+......
T Consensus 312 ~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G 391 (477)
T TIGR01301 312 MLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILG 391 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhh
Confidence 3334444455666777888998 477777776666665555432110 011222222222
Q ss_pred Hhhhcccceeeeecccccccchh--hHHHHHHHHHHhHhHhHHHHHHHHhhcccc--hhHHHHHHHHHHHHHHHHhhccc
Q 016515 296 MCVTGTITVATIYAPEIYPTSAR--TTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFP 371 (388)
Q Consensus 296 ~~~~~~~~~~~~~~~El~p~~~R--~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~ 371 (388)
+.....++++|++.+|..|.+.| |.-+|+-|.+-.+.-++.....+.+.+..+ ....+.+-++..+++++.+++.+
T Consensus 392 i~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 392 IPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 33334567899999999996545 777888888876666665554444333322 22345555677778888888888
Q ss_pred ccccC
Q 016515 372 FETMG 376 (388)
Q Consensus 372 pet~~ 376 (388)
|+++.
T Consensus 472 ~~~~~ 476 (477)
T TIGR01301 472 PRPRV 476 (477)
T ss_pred CCCCC
Confidence 88764
No 104
>TIGR00895 2A0115 benzoate transport.
Probab=99.21 E-value=3.3e-10 Score=106.86 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=95.4
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.+..++..++.++.+++.||+|||+.+..+..+..+..+......+.+......+...++.....+....+.+|.+|++.
T Consensus 59 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 138 (398)
T TIGR00895 59 SAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF 138 (398)
T ss_pred HHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh
Confidence 34456678889999999999999999988777666555444443333322222223223333344566788999999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
|+++.++......+|+.++|.+.+.+.+..+....+.+.+++.++..++.....||+.
T Consensus 139 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 139 RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999988887776555444555555555555555555567764
No 105
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.21 E-value=9.4e-10 Score=106.61 Aligned_cols=136 Identities=13% Similarity=0.175 Sum_probs=85.2
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
....++..++.++.|++.||+|||+++..+.+..++..+......+........+...++.. .......+.+|.+|++.
T Consensus 78 ~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~-~~~~~~~~i~~~~~~~~ 156 (476)
T PLN00028 78 IASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLA-TFVSCQYWMSTMFNGKI 156 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH-hhHHHHHHHHHhcChhh
Confidence 34455677889999999999999998887776665555444443333222222222222222 22223346789999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhc----c-----cchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVT----S-----CHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~----~-----~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
|+++.|+.+..+.+|+.+++.+.+.+.. . .+....+.+.+++.++..+..++++++.
T Consensus 157 rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~ 222 (476)
T PLN00028 157 VGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDL 222 (476)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 9999999998888888777665543321 1 1333456666666666666666655443
No 106
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.21 E-value=4.5e-10 Score=105.65 Aligned_cols=141 Identities=16% Similarity=0.172 Sum_probs=98.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.++.|++.||+|||+.+..+..+..+..+.....++.+......+...++.....+....+..|.+|++
T Consensus 46 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 125 (385)
T TIGR00710 46 LTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGE 125 (385)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcH
Confidence 34445667888999999999999999998877766655554444333333222222322222233345567889999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGR 377 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~ 377 (388)
.|+++.++.+....+++.++|.+.+.+.+..+....+++.+++.++..+..++..||++.+
T Consensus 126 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 126 ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999888776655555566666666666666666666776543
No 107
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.20 E-value=5.5e-10 Score=106.03 Aligned_cols=139 Identities=17% Similarity=0.140 Sum_probs=94.5
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.++.|++.||+|||+.+..+.++..+..+......+........+...++.....+....+.+|.+|++
T Consensus 56 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 135 (406)
T PRK11551 56 FSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR 135 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH
Confidence 34456677889999999999999999998887666555444443333333333333333333333445667899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+++.++.+....+|+.++|.+...+.+..+....+++.+++.++..+...+..||+.
T Consensus 136 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 136 LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 99999999999989999999987766555544445566656555555555555567764
No 108
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.20 E-value=3.5e-08 Score=92.94 Aligned_cols=138 Identities=18% Similarity=0.235 Sum_probs=88.8
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-chhHHHHHHHHH----HHHhhhcccceeeeecccc
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-QSAVVTTVLLFG----VRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~El 312 (388)
.+..+.+++.....+++..|+|-|++++.+.+..++=+...... ++.+........ -.......+.....|..|.
T Consensus 250 ~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~ 329 (400)
T PF03825_consen 250 ALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRI 329 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 35567789999999999999999999988877766644444433 332221111111 0111112234456789999
Q ss_pred cccchhhHHHHHHHHHH-hHhHhHHHHHHHHhhcccchhH------HHHHHHHHHHHHHHHhhccccccc
Q 016515 313 YPTSARTTGFGVASSLG-KVGGMVCPLVAVGLVTSCHLRL------AVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~-~i~~~~~p~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|++.|+++.++.+.+. .+|+.++.++.+.+.+..+... .+.+.+++.++..++.+++.+|+.
T Consensus 330 ~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 330 APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 99999999999998875 5899999999999888655332 223344444445444555445543
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.17 E-value=2.2e-08 Score=97.07 Aligned_cols=107 Identities=14% Similarity=0.119 Sum_probs=64.4
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh----hch-hHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF----HQS-AVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
+..+..+++.++.+++.||+|||+.+..+..+..+..+.+.. ... .+...+................+.+.+|..
T Consensus 274 ~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~i 353 (473)
T PRK10429 274 YAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTV 353 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 344667888888999999999999887666544332222211 112 222212222222233334456677888884
Q ss_pred c-----cchh--hHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 314 P-----TSAR--TTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 314 p-----~~~R--~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
| +..| |...|....+..++..+++.+.+.+.+
T Consensus 354 d~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 354 DYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred hhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4444 445677777788888888888777654
No 110
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.17 E-value=1.3e-09 Score=100.92 Aligned_cols=139 Identities=17% Similarity=0.183 Sum_probs=96.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....+...++.+..|.++||+|||+.++.+..+.++..+...+..+.+......+....+.....+....+.+|.+|++
T Consensus 38 ~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~ 117 (352)
T PF07690_consen 38 FSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPE 117 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhh
Confidence 44456677889999999999999999888887776665333333233333333333333443444566778999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+++.++.+....+|..++|.+.+.+.+..+....+++.+++.+++.++..++.++++
T Consensus 118 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 118 ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred hhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence 99999999999999999999999888775555556777777777777665444444433
No 111
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2.4e-08 Score=90.63 Aligned_cols=269 Identities=14% Similarity=0.143 Sum_probs=155.4
Q ss_pred cCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc-------------
Q 016515 12 FSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR------------- 77 (388)
Q Consensus 12 ~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~------------- 77 (388)
-..+|..++++=|+.|.|.|.. ..+.+|++...|++.-..-+...|.++++|.+++|+++..+..+
T Consensus 100 ~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~ 179 (422)
T COG0738 100 SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILA 179 (422)
T ss_pred hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHH
Confidence 4567889999999999999974 67789999999987777778899999999999999987665331
Q ss_pred ------cchHHHHHHhhHHHHHHHHHH--hcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhc
Q 016515 78 ------LNWRWLLAFSSVPSFALLLFY--GLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEES 149 (388)
Q Consensus 78 ------~~WR~~f~~~~i~~l~~~~~~--~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (388)
-.||+++...+...++..+.. ...||-+. ++.+
T Consensus 180 ~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~---------------------------------------~~~~ 220 (422)
T COG0738 180 IKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV---------------------------------------AAPS 220 (422)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc---------------------------------------cccc
Confidence 136777665554433332222 22232110 0000
Q ss_pred hhhhccccccccccccccccccchhhhhhcchhHHHHHHHHHHHHHHHHHHH--HHHHHHhhhhcCCCCCCCCcccccCC
Q 016515 150 NLLRDTHMLSMTRKITDKLKSGFSSFFMLFSRKLIRTTLLLWVLFFANVFSY--YGAVLLTSKLSSGDNKCGSKVLHADK 227 (388)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (388)
+ .+ .+.....++++.++.+.-.+..+.+.+..... +...+.... .+. .
T Consensus 221 ~--------------~~---~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~--~g~-----------~ 270 (422)
T COG0738 221 L--------------GA---SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL--LGL-----------N 270 (422)
T ss_pred c--------------cc---cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCc-----------c
Confidence 0 00 00001233444455544444444444433222 222222110 000 0
Q ss_pred CCCchhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeee
Q 016515 228 SKDNSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATI 307 (388)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
..+...+ ....-.+..+|-+++.++..|+...+.+.....+..+.++...+.++ ...+...+...++....+|..+.
T Consensus 271 ~~~aa~~--~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g-~v~~~~l~~ig~F~simfPTIfs 347 (422)
T COG0738 271 EQQAAYY--LSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG-VVALYALFLIGLFNSIMFPTIFS 347 (422)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHhHHHHHHHHH
Confidence 0111222 22223445778888888889998888777766666555555444333 23334444455666677788888
Q ss_pred ecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHH
Q 016515 308 YAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVI 354 (388)
Q Consensus 308 ~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~ 354 (388)
...+..|.+. ...|..-..+-+||.+.|++.+.+.|..+....+.
T Consensus 348 lal~~l~~~t--s~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 348 LALKNLGEHT--SVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHhccCccc--cccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 8888888332 33333344456889999999999888765444433
No 112
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.16 E-value=1.8e-09 Score=108.51 Aligned_cols=108 Identities=18% Similarity=0.227 Sum_probs=80.1
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++.++|.++.|+++||+|||+.++++.++.++..+...+..+.+...+..++..++..+..+..+.+.+|.+|++
T Consensus 208 ~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~ 287 (742)
T TIGR01299 208 GLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQE 287 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Confidence 34456777899999999999999999998887766655554444333333333344444455555677889999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhh
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLV 344 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~ 344 (388)
.|++..++...+..+|+++++.+...+.
T Consensus 288 ~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 288 KRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988887665444
No 113
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.15 E-value=2.4e-09 Score=101.28 Aligned_cols=138 Identities=19% Similarity=0.149 Sum_probs=89.9
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..++.++.|.+.||+|||+.++.+..+.++..+......+.+......+....+.....+....+..|.+|++
T Consensus 53 ~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~ 132 (405)
T TIGR00891 53 ISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH 132 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh
Confidence 34456677888999999999999999998877666655554444333332222233333333334455667889999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc--hhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH--LRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+++.++.+....+|..++|.+.+.+.+..+ ....+.+..+..++. ++.....||++
T Consensus 133 ~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 133 LRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 99999999999999999999988776655433 233343333333333 33344457764
No 114
>PRK11462 putative transporter; Provisional
Probab=99.15 E-value=5.6e-08 Score=93.78 Aligned_cols=66 Identities=21% Similarity=0.141 Sum_probs=44.1
Q ss_pred HHHHhhcc-cCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-------ccchHHHHHHhhHHHHHHHHH-HhcCCC
Q 016515 38 AYFLEFVP-VSHRGRWMVALSAFWTAGTIFEASLAWVVMT-------RLNWRWLLAFSSVPSFALLLF-YGLAPE 103 (388)
Q Consensus 38 ~~~~E~~p-~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~-------~~~WR~~f~~~~i~~l~~~~~-~~~~pE 103 (388)
++..|.++ +++|++..++-+.+..+|..+++.+...+.. ..+|+....+.++++++...+ ....+|
T Consensus 132 al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 132 ALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 46679887 6899999999888888887776655433221 247888777777766554433 333444
No 115
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.14 E-value=1.5e-08 Score=97.00 Aligned_cols=258 Identities=17% Similarity=0.210 Sum_probs=144.5
Q ss_pred HHHHHHHHhhccCcchh-hHHHHHHhhcc-cCchhhHHHHHHHHHHHHHHHHHHHHHHHh----cc---cchHHHHHHhh
Q 016515 18 SLVIFRCFVGVGLGGVP-VFLAYFLEFVP-VSHRGRWMVALSAFWTAGTIFEASLAWVVM----TR---LNWRWLLAFSS 88 (388)
Q Consensus 18 ~l~~~R~l~G~~~g~~~-~~~~~~~E~~p-~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~----~~---~~WR~~f~~~~ 88 (388)
.+.+.-++..++....- .-.++..|.++ +++|.+..+.-+.+..+|.++.+.+...+. +. .+||+...+.+
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~ 184 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLA 184 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHH
Confidence 34556666666555432 33467789998 478999999888888888865554443332 11 27999988888
Q ss_pred HHHHHHHH-HHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhcccccccccccccc
Q 016515 89 VPSFALLL-FYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDK 167 (388)
Q Consensus 89 i~~l~~~~-~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (388)
+..++... ..+..+|.++ +.++ ++++
T Consensus 185 iv~~v~~~i~~~~~ke~~~------~~~~-----------------------------~~~~------------------ 211 (428)
T PF13347_consen 185 IVGLVFFLITFFFVKERSV------EVTE-----------------------------QEKK------------------ 211 (428)
T ss_pred HHHHHHhhhhhheeeeccc------cccc-----------------------------cccc------------------
Confidence 87776544 4455677110 0000 0000
Q ss_pred ccccchhhhhhcchhHHHHHHHHHH-HHHHHHHHH-HHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhh
Q 016515 168 LKSGFSSFFMLFSRKLIRTTLLLWV-LFFANVFSY-YGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAEL 245 (388)
Q Consensus 168 ~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (388)
.+....++.+++.+..+....... .++...... ...++....+.. . +. ......+..+..+
T Consensus 212 -~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~--------------~-~~-~~~~~~~~~~~~~ 274 (428)
T PF13347_consen 212 -ISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGN--------------E-GL-ISIFMLIFFVASI 274 (428)
T ss_pred -cccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcC--------------c-hh-hHHHHHHHHHHHH
Confidence 000012233443333332222221 122221111 111222222211 0 01 1112334566678
Q ss_pred HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--chhHHHHHHHHHHHHhhhcccceeeeeccccccc-------c
Q 016515 246 PGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT-------S 316 (388)
Q Consensus 246 ~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~-------~ 316 (388)
++..+.++++||+|||+.+..+..+.++..+.+... .+.+...........+....+...+.+.+|+.+. +
T Consensus 275 v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r 354 (428)
T PF13347_consen 275 VGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRR 354 (428)
T ss_pred HHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCC
Confidence 888999999999999999988887776655554432 2333333333444444455567788999999873 4
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
..|.-.|+.+.+.+++..+++.+.+.+.+
T Consensus 355 ~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 355 REGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred chHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 45777888888888888888877766544
No 116
>PRK10054 putative transporter; Provisional
Probab=99.14 E-value=1.2e-09 Score=103.24 Aligned_cols=136 Identities=14% Similarity=0.141 Sum_probs=90.9
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.+..+..+++.+..|+++||+|||+.++.+.+...+..+.+.+.++.+......+..........+....+.+|.+|++.
T Consensus 50 s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 129 (395)
T PRK10054 50 TIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS 129 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH
Confidence 33455677888999999999999998887776665544444443333222222222211212223445677899999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
|+++.|+.+....+|+.++|.+.+.+.+ .+...++.+.+++.+++.+...+..||+
T Consensus 130 ~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 130 KTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998887664 3445566666666666655555544554
No 117
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.14 E-value=7.9e-10 Score=103.94 Aligned_cols=140 Identities=15% Similarity=0.131 Sum_probs=98.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..+...++.++.|++.||+|||+.+..+.+...+.........+.+......+...++.....+....+.+|.+|++
T Consensus 35 ~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T TIGR00893 35 FSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPAS 114 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHH
Confidence 34456677888999999999999999888877666555544444333333333333333333344456678899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
.|+++.++......+|..++|.+.+.+.+..+....+.+.+++.++..+..++..||++.
T Consensus 115 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 115 ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence 999999999999999999999888877666555556666666666666666665666543
No 118
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.14 E-value=2.4e-10 Score=111.29 Aligned_cols=113 Identities=14% Similarity=-0.023 Sum_probs=85.0
Q ss_pred cCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHH-HHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHhh
Q 016515 12 FSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVA-LSAFWTAGTIFEASLAWVVMT-RLNWRWLLAFSS 88 (388)
Q Consensus 12 ~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~-~~~~~~~G~~~~~~l~~~~~~-~~~WR~~f~~~~ 88 (388)
.+++...++++|++.|++.+.. .....++.|.+|++.||+..+. ++.+...| .+++.+...+.+ ..+|+.++++..
T Consensus 338 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g-~~~p~i~g~l~~~~~~~~~~~~~~~ 416 (490)
T PRK10642 338 NSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA-GLTPTLAAWLVESTQNLMMPAYYLM 416 (490)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCchHHHHHHH
Confidence 3456778889999999876654 4455677899999999998875 55555444 455555544443 346888887777
Q ss_pred HHHHHHHHHHhcCCCCchHHHhc-----cChHHHHHHHHHHH
Q 016515 89 VPSFALLLFYGLAPESPRYLCAK-----ARTVDAHRILEKMA 125 (388)
Q Consensus 89 i~~l~~~~~~~~~pESp~~l~~~-----~~~~~a~~~l~~~~ 125 (388)
+++++..+..+++||||+|+.+| ||.|||.++++|++
T Consensus 417 ~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 417 VVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 78777766677789999999865 99999999998875
No 119
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.14 E-value=1.4e-09 Score=103.52 Aligned_cols=138 Identities=17% Similarity=0.161 Sum_probs=96.0
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
+..++..++.+..|.++||+|||++++.+.++.++..+.....++........+....+.....+..+.+..|.+|++.|
T Consensus 59 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 59 LYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 34556677888999999999999999888777666555544444333333332332222212223456778999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
+++.++.+....++..++|.+.+.+.+..+....+++.+++.+++.+..++..||++.
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999888776665555566777777777776655555688753
No 120
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.13 E-value=1.9e-09 Score=102.34 Aligned_cols=140 Identities=18% Similarity=0.117 Sum_probs=95.4
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.++.|.+.||+|||+.++.+....++..+......+.+......+..........+..+.+..|.+|++
T Consensus 54 ~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~ 133 (406)
T PRK15402 54 MTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEA 133 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChh
Confidence 34455667788899999999999999988877666665554444333322222222222222222345567788999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
.|.++.++......++..++|.+.+.+.+..+....+++.+++.+++.+..++..||+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 134 DAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 999999999888888888999888777665555556666777777666666666677753
No 121
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.13 E-value=1.7e-09 Score=102.22 Aligned_cols=141 Identities=12% Similarity=0.052 Sum_probs=95.6
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.++.|+++||+|||+.++.+.....+.........+........+....+.....+..+.+.+|.+|++
T Consensus 44 ~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~ 123 (392)
T PRK10473 44 FSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR 123 (392)
T ss_pred HHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH
Confidence 33445566778899999999999999988877666555444443333222222222222222223345677889999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGR 377 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~ 377 (388)
.|+++.++.+....+++.++|.+.+.+.+..+....+.+.+++.++..++..+..||++.+
T Consensus 124 ~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 124 RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999998877665555544556667766666666666666776543
No 122
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.13 E-value=3.6e-09 Score=100.09 Aligned_cols=137 Identities=11% Similarity=0.045 Sum_probs=96.0
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
...+...++.++.+.+.||+|||+.++.+..+.++..+......+.+......+...++.....+....+.+|.+|++.|
T Consensus 63 ~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~ 142 (394)
T PRK10213 63 VTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTV 142 (394)
T ss_pred HHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHH
Confidence 44566677889999999999999999888877766555444433333333333333333333345566788999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
+++.++......++..++|.+.+.+.+..+....+++.+++++++.+......||++
T Consensus 143 ~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 143 PKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999888777655555666666666555555544457754
No 123
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.12 E-value=1.5e-08 Score=92.64 Aligned_cols=149 Identities=19% Similarity=0.202 Sum_probs=99.5
Q ss_pred chhHHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecc
Q 016515 231 NSLYVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAP 310 (388)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
.+..+..+..++.+++|+++.+++-||+|-|+++..+.++..+..+.............+-.....+..+..+..-.|.+
T Consensus 288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~ 367 (438)
T COG2270 288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLA 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 34455667778889999999999999999999888877765554444333222211111111122333455566778999
Q ss_pred cccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcch
Q 016515 311 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGREL 379 (388)
Q Consensus 311 El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l 379 (388)
++.|++.-+...|+.+..++..++++|++...+.+.++..-......++.+...+.++...|+.++++.
T Consensus 368 ~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~~~~~~ 436 (438)
T COG2270 368 RLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVPGRREA 436 (438)
T ss_pred HhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCCCCccc
Confidence 999999999999999999999999999999888777665433333333333344445555566544443
No 124
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.10 E-value=3.9e-09 Score=100.87 Aligned_cols=119 Identities=20% Similarity=0.210 Sum_probs=84.0
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..++.++.|++.||+|||+.++.+....++.........+.+...+..+...++....++....+..|.+|++
T Consensus 59 ~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~ 138 (426)
T PRK12307 59 ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH 138 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh
Confidence 34456677888999999999999999998888776665554444333333333333333333344456677889999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHH
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVIL 355 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i 355 (388)
.|+++.++......+|..++|.+.+.+.+..+....+++
T Consensus 139 ~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 139 LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 999999999988889999998887776665544444443
No 125
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.10 E-value=4e-09 Score=101.11 Aligned_cols=138 Identities=13% Similarity=0.109 Sum_probs=94.6
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.++.|++.||+|||+.+..+.+..++..+......+.+......+...++....++....+.+|.+|++
T Consensus 64 ~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~ 143 (434)
T PRK11663 64 ATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT 143 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH
Confidence 34456677888999999999999999998888777666655544333322222222222222233455567889999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
.|+++.++.+....+|+.++|.+.+.+.+..+....+.+.+++.++..+...+..||+
T Consensus 144 ~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 144 ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999998888877765555566666655554444444444554
No 126
>PRK10504 putative transporter; Provisional
Probab=99.09 E-value=4.6e-09 Score=101.80 Aligned_cols=137 Identities=13% Similarity=0.058 Sum_probs=92.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
...++..++.++.|++.||+|||+.++.+..+.++..+......+........+...++.....+....+..|.+|++.|
T Consensus 53 ~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 132 (471)
T PRK10504 53 SYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQY 132 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHH
Confidence 33455677889999999999999988877665555444333333322222222332233333345566778999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
+++.|+.+....++..++|.+.+.+.+..+....+.+...+..++.+......|+.+
T Consensus 133 ~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 133 MAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999999888777655455566555555566555555555543
No 127
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.08 E-value=5.4e-09 Score=101.97 Aligned_cols=117 Identities=21% Similarity=0.208 Sum_probs=83.1
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
....++..++.++.|++.||+|||+.++.+.++.++..+......+.+......+...++..+..+....+..|.+|.+.
T Consensus 62 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 141 (496)
T PRK03893 62 SAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL 141 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 34456678889999999999999999888877666655554444333333333333333333444556678899999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHH
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVI 354 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~ 354 (388)
|+++.++.+....+|+.++|.+.+.+.+..+....+.
T Consensus 142 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~ 178 (496)
T PRK03893 142 RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFF 178 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHH
Confidence 9999999999999999999998887776554444443
No 128
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.08 E-value=2.3e-09 Score=104.24 Aligned_cols=139 Identities=10% Similarity=0.077 Sum_probs=98.1
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.++.|++.||+|||+.++.+..+..+..+......+........+...++.....+....+..|.+|++
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~ 122 (485)
T TIGR00711 43 ITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE 122 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH
Confidence 34456677888999999999999999998887766665554444333333223333333333334456678899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+++.++......+|..++|.+.+.+.+..+....+++.+.+.+++.++..+..||++
T Consensus 123 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 123 KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999998888777655555566666666666666666666654
No 129
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.07 E-value=6.7e-09 Score=100.10 Aligned_cols=139 Identities=16% Similarity=0.045 Sum_probs=84.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc----hhHHHHHHHHHHHHhhhcccceeeeecccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ----SAVVTTVLLFGVRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 312 (388)
.....+...++.++.|++.||+|||++++.+..+.++..+...... +........+...++....++.......|.
T Consensus 69 ~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~ 148 (452)
T PRK11273 69 LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW 148 (452)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHh
Confidence 3445666788899999999999999998888776666555443321 222222222222222222333344567899
Q ss_pred cccchhhHHHHHHHHHHhHhHh-HHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 313 YPTSARTTGFGVASSLGKVGGM-VCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~~i~~~-~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
+|++.|+++.|+.+....+|+. .+|.+...+....+....+++.+++.++..++..++.||+.
T Consensus 149 ~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 149 WSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred CChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence 9999999999998888888764 45543322222223344556555655555555555556653
No 130
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.06 E-value=6.4e-09 Score=99.77 Aligned_cols=127 Identities=16% Similarity=0.162 Sum_probs=81.7
Q ss_pred HHHhhhhHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHhhhc-hhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 239 IASLAELPGLILSAIIVDKI-GRKLSMVLMFVSACIFLLPLVFHQ-SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~-gRr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.......++.+++|+++||+ |||+.++.+....++..+.+.... ..............+.....+....+.+|+||++
T Consensus 53 ~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~ 132 (493)
T PRK15462 53 AYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPT 132 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCC
Confidence 33455677889999999999 999998887766555433333221 1111111111111111112234457889999986
Q ss_pred --hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 016515 317 --ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 365 (388)
Q Consensus 317 --~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 365 (388)
.|.++.++.+..+++|+.++|.+.+++.+..+....+.+.++..+++.+
T Consensus 133 ~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 133 DPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred CccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999887665555556554443344433
No 131
>PRK03699 putative transporter; Provisional
Probab=99.06 E-value=1.5e-08 Score=95.85 Aligned_cols=130 Identities=17% Similarity=0.263 Sum_probs=86.6
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
....++..++.++.|++.||+|||+.+..+..+..+..+......+.+...+..+....+.....+....+.+|.+|++.
T Consensus 49 s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~ 128 (394)
T PRK03699 49 TFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ 128 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch
Confidence 34456678889999999999999999888776665555444443333322233333333333334556678899999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcc-cchhHHHHHHHHHHHHHHHHh
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASS 367 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~ 367 (388)
|+++.++.+....+++.++|.+.+.+.+. .+....+.+.+++.++..+..
T Consensus 129 r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 129 RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888999887766543 344445555555555444333
No 132
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.05 E-value=1.2e-08 Score=99.71 Aligned_cols=106 Identities=17% Similarity=0.177 Sum_probs=75.6
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch------hHHHHHHHHHHHHhhhcccceeeeecc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS------AVVTTVLLFGVRMCVTGTITVATIYAP 310 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
.....++.+++.++.+++.||+|||+.+..+.++..+..+......+ ........+...++..+.++....+.+
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 141 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITS 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 44456677899999999999999999988776665554443333211 122223333334444455567789999
Q ss_pred cccccchhhHHHHHHHHHHhHhHhHHHHHHHH
Q 016515 311 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVG 342 (388)
Q Consensus 311 El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~ 342 (388)
|.+|++.|+++.++.+....+|..+++.+...
T Consensus 142 e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 142 EFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888766543
No 133
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.05 E-value=6.9e-09 Score=96.61 Aligned_cols=133 Identities=13% Similarity=0.080 Sum_probs=88.5
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-----hhHHHHHHHHHHHHhhhcccceeeeeccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-----SAVVTTVLLFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 311 (388)
..+..+...++.++.|++.||+|||+.++.+..+..+......... +.+......+....+.....+....+.+|
T Consensus 40 ~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 119 (365)
T TIGR00900 40 ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPD 119 (365)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444566778889999999999999999887766544433332211 22222222222223323333456788999
Q ss_pred ccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhc
Q 016515 312 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 369 (388)
Q Consensus 312 l~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 369 (388)
.+|++.|+++.++.+....+|..++|.+.+.+.+..+....+++.++..+++.+....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 120 LVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred cCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998887766555445555555555555444443
No 134
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.04 E-value=2.4e-09 Score=100.60 Aligned_cols=138 Identities=13% Similarity=0.143 Sum_probs=97.0
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.+..++..++.++.|.+.||+|||+.+..+..+.++.........+.+......+...++.....+....+.+|.+|++.
T Consensus 33 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 112 (377)
T PRK11102 33 SAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE 112 (377)
T ss_pred HHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 34456677889999999999999999988877766655554443333332233333333333333455678899999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
|+++.++.+....+++.++|.+.+.+.+..+....+.+.+++.++..+...+..||++
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 113 FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999999999999999999988887776555455666666666666666655567764
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=99.03 E-value=9.7e-09 Score=97.01 Aligned_cols=136 Identities=7% Similarity=-0.005 Sum_probs=92.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
...+...++.+..|.+.||+|||+++..+.....+..+......+.+...+..+..........+....+.+|.+|++.|
T Consensus 52 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r 131 (390)
T PRK03545 52 IYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKK 131 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 33445567778889999999999999888776666555444434433322322222222222234456788999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
+++.|+......++..++|.+.+.+.+..+....+++.++++++..+......||.
T Consensus 132 ~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 132 AQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998887766655555667777776666655555545554
No 136
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.03 E-value=1.4e-09 Score=101.67 Aligned_cols=139 Identities=14% Similarity=0.085 Sum_probs=93.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..++.++.|+++||+|||+.++.+.++.++..+......+.+...+..+...++.....+....+.+|.+|++
T Consensus 36 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 115 (379)
T TIGR00881 36 LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRS 115 (379)
T ss_pred HHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHh
Confidence 34456677888999999999999999998887776665555444333333333333333333334456678899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHH-HHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPL-VAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+++.++.+....+|+.++|. +...+.+..+....+++.+++.++..+..++..||++
T Consensus 116 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 116 ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 9999999999999999999984 4444444444445566566556555555555555543
No 137
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.00 E-value=1.9e-08 Score=98.08 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=92.8
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccc-ccchh
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIY-PTSAR 318 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~-p~~~R 318 (388)
..++...+.+..|+++||+|||+.++.+..+..+..+.....++.+...........+..+..+.......+.+ |++.|
T Consensus 50 ~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r 129 (495)
T PRK14995 50 YSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQR 129 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34555667788999999999999999888776665544444333333333222222222223333344455555 78999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
+++.|+......+|..++|.+.+.+.+..+..+.+++...+.+++.++..++.||.++
T Consensus 130 ~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 130 NMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999988877665666766666666666666666676543
No 138
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.00 E-value=2.2e-08 Score=95.07 Aligned_cols=136 Identities=19% Similarity=0.171 Sum_probs=91.3
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.+..+...++.++.|++.||+|||+.++.+....++..+......+.+......+...++ .+..+....+..|.+|++.
T Consensus 61 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~ 139 (408)
T PRK09874 61 SITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL-GGFVPNANALIATQVPRNK 139 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh-hhhHHhHHHHHHHhcCHhh
Confidence 344556677888899999999999998877666555444433333322222222222222 2233444556788999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
|+++.++.+....+|..++|.+.+.+.+..+....+++.+++.+++.+...+..||.
T Consensus 140 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 140 SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999988999999999888776655555566767776666666666655654
No 139
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.00 E-value=1.1e-08 Score=96.30 Aligned_cols=139 Identities=13% Similarity=0.073 Sum_probs=95.0
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.+..|++.||+|||+++..+..+.++..+.....++.+......+...++.....+....+..|.+|++
T Consensus 44 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 123 (382)
T PRK10091 44 ISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG 123 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH
Confidence 34456677889999999999999999998887777665555444444333333333322222222334456788999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+++.++......++..++|.+.+.+.+..+....+.+.++..++..+..++..||.+
T Consensus 124 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 124 KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999888888999898888777666555555666666666655555555567754
No 140
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.99 E-value=2.1e-08 Score=94.89 Aligned_cols=140 Identities=14% Similarity=0.024 Sum_probs=90.0
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....+...++.++.|.++||+|||+.++.+.....+..+......+.+......+...++.....+....+..|.+|.+
T Consensus 49 ~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T PRK11652 49 MAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence 34455667888999999999999999988877666555444443333222222222222221122234456778899999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
.|+.+.++.+....++..++|.+.+.+.+..+....+.+.++..++..+...+..||++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999998888888888899888776665554555665555555554445555677643
No 141
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.99 E-value=3.7e-07 Score=81.90 Aligned_cols=262 Identities=17% Similarity=0.145 Sum_probs=152.2
Q ss_pred cHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhccc-chHHHHHHhhHHHH
Q 016515 15 NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRL-NWRWLLAFSSVPSF 92 (388)
Q Consensus 15 ~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~-~WR~~f~~~~i~~l 92 (388)
+.+.|+.+-.+.|.|.+.. ....+.+-|.+|+| -+.+++.+.....+|..+++.+...+.++. +||....+=++|++
T Consensus 98 ~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~al 176 (395)
T COG2807 98 GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLAL 176 (395)
T ss_pred cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHH
Confidence 6778999999999998864 45567888999975 577889999999999988888877776655 79999888899988
Q ss_pred HHHHHHhcCCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccccc
Q 016515 93 ALLLFYGLAPESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGF 172 (388)
Q Consensus 93 ~~~~~~~~~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (388)
+.++.|+ |...| ++. +.. +.+ .
T Consensus 177 lAl~~Wl--Pq~~r-----~~~------------------~~~------~~~-~-------------------------- 198 (395)
T COG2807 177 LALLIWL--PQALR-----EQA------------------ASI------ATK-L-------------------------- 198 (395)
T ss_pred HHHHHHh--hhccc-----ccc------------------ccc------ccc-c--------------------------
Confidence 8877764 32211 000 000 000 0
Q ss_pred hhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccCCCCCchhHHHHHHHHhhhhHHHHHHH
Q 016515 173 SSFFMLFSRKLIRTTLLLWVLFFANVFSYYGAVLLTSKLSSGDNKCGSKVLHADKSKDNSLYVDVFIASLAELPGLILSA 252 (388)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (388)
.+...+++.+. .+.+.+.+-.+++.||...-|.+.+..+.. .+.+. ......+..+.+++.++..-
T Consensus 199 ~~~~~vw~~~~---aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G----------~sa~~-aG~llsl~~l~~~~~~ll~P 264 (395)
T COG2807 199 VSVRKVWRSPL---AWQVTLFMGLQSLLYYIVIGWLPAILIDRG----------LSAAE-AGSLLSLMQLAQLPTALLIP 264 (395)
T ss_pred ccccccccCch---hHHHHHHHHhhHHHHHHHHHHHHHHHHHcC----------CCHHH-hhhHHHHHHHHHHHHHHHHH
Confidence 00000222221 111222223466777776666655532211 11111 11123345677889999999
Q ss_pred HHHHHhc-hhHHHHHHHHHHH--HHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeee-cccccccchhhHHHHHHHHH
Q 016515 253 IIVDKIG-RKLSMVLMFVSAC--IFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIY-APEIYPTSARTTGFGVASSL 328 (388)
Q Consensus 253 ~l~d~~g-Rr~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~El~p~~~R~~~~~~~~~~ 328 (388)
.+.+|.. +|+..+....+.. .+.+.+...+..++. .+ .......+.+++.-.. .-..-.++..+.-.|+...+
T Consensus 265 ~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~--llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~ 341 (395)
T COG2807 265 LLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-AL--LLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGV 341 (395)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HH--HHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhh
Confidence 9999865 4444433332222 222222222222222 11 1222223344443333 33334556667778999999
Q ss_pred HhHhHhHHHHHHHHhhcccchhHH
Q 016515 329 GKVGGMVCPLVAVGLVTSCHLRLA 352 (388)
Q Consensus 329 ~~i~~~~~p~~~~~~~~~~~~~~~ 352 (388)
|.+-+.++|++.+++.|.++.+..
T Consensus 342 GYllAa~GP~l~G~lhDa~gsw~~ 365 (395)
T COG2807 342 GYLLAAFGPWLFGFLHDATGSWSA 365 (395)
T ss_pred hHHHHhhhhhhHhHHHHhcCChHH
Confidence 999999999999999998775543
No 142
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.98 E-value=2.6e-08 Score=94.42 Aligned_cols=133 Identities=16% Similarity=0.078 Sum_probs=88.5
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
.+......++.|.++||+|||+.++.+.....+..+.....++.+......+..........+....+..|.+|++.|++
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 44445567889999999999999988887776665555444333322222222222211222344567899999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
+.|+.+....+|..++|.+.+.+. ..+....+++.+...+++.+...+..||.
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999888776 43444556655555555554444445553
No 143
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.97 E-value=1.3e-08 Score=97.69 Aligned_cols=139 Identities=14% Similarity=0.075 Sum_probs=89.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh----chhHHHHHHHHHHHHhhhcccceeeeecccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH----QSAVVTTVLLFGVRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 312 (388)
..+..++..++.+..|++.||+|||+.++.+.++.++..+..... .+........+...++....++.......|.
T Consensus 67 ~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~ 146 (438)
T TIGR00712 67 LSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHW 146 (438)
T ss_pred HHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHh
Confidence 445566778899999999999999998887766655544443321 1111111122222222222334445677899
Q ss_pred cccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc-cchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 313 YPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
+|++.|+++.|+.+....+++.++|.+.....+. .+....+++.++++++..+..+++.||++
T Consensus 147 ~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 147 WSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred cCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 9999999999999999999998888766544432 33345566667776666666666666653
No 144
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.96 E-value=1.1e-08 Score=100.56 Aligned_cols=136 Identities=19% Similarity=0.214 Sum_probs=105.9
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..+|+++.|.++||+|||++++.+.++..++.+...+..+.....++-+...++..+.....+.+.+|+++++
T Consensus 124 ~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~ 203 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPK 203 (521)
T ss_pred HHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcc
Confidence 44556777899999999999999999999999998888877777777666677777777777788888999999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
.|+.+..+ ..+.+.++..+|....++.. +....+++..+..++..+. ++++||.++
T Consensus 204 ~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~r 259 (521)
T KOG0255|consen 204 QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPR 259 (521)
T ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChH
Confidence 99999999 88888888888887777665 2233344444444444333 666678653
No 145
>PRK11043 putative transporter; Provisional
Probab=98.96 E-value=3e-08 Score=93.99 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=91.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..++.++.|+++||+|||+.++.+.....+..+......+.+......+....+..........+..|.+|++
T Consensus 47 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 126 (401)
T PRK11043 47 LSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQ 126 (401)
T ss_pred HHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcH
Confidence 34445667889999999999999999998877666555544444333222222222221221112223345778999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
.|+...+..+....+++.++|.+.+.+.+..+....+.+..++.++..+..++.+|+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 127 KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999988888899999999888877766655566666666666665555554443
No 146
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.95 E-value=2.3e-08 Score=93.41 Aligned_cols=107 Identities=22% Similarity=0.301 Sum_probs=72.6
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-hhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ-SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
..+..++..++.++.|++.||+|||+.++.+.++..+..+...... +.+......+..... .+.+.....+.+|.+|+
T Consensus 43 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~ 121 (366)
T TIGR00886 43 VAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPK 121 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCH
Confidence 3445667788999999999999999999888777666555544433 322222222222222 23334455678999999
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHhh
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGLV 344 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~~ 344 (388)
+.|+++.++......+|..+++.+.+.+.
T Consensus 122 ~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 122 KIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999998887777777766655443
No 147
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.95 E-value=1.8e-08 Score=94.20 Aligned_cols=136 Identities=13% Similarity=-0.047 Sum_probs=88.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
...++..++.+..|++.||+|||++++.................+........+..... .+.........+|.+|++.|
T Consensus 34 ~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g-~~~~~~~~~~~~~~~~~~~r 112 (368)
T TIGR00903 34 TYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALG-QPFLLNAFAPAASQIREERR 112 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhH-hHHHHHHHHHHHHHcCHHHH
Confidence 34556678889999999999999876654433323222112112222222222222222 12223344556899999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
+++.++......+|+.++|.+.+.+.+..+....+++.+++.++..+..++..||.+
T Consensus 113 ~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 113 DLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999988887776655555666667777776666776778754
No 148
>TIGR00898 2A0119 cation transport protein.
Probab=98.95 E-value=1.3e-08 Score=99.67 Aligned_cols=135 Identities=20% Similarity=0.168 Sum_probs=94.0
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..++.++.|++.||+|||+.++.+.++.++..+...+..+.+...+..+...++..+..+....+.+|.+|++
T Consensus 133 ~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~ 212 (505)
T TIGR00898 133 QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKK 212 (505)
T ss_pred HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChh
Confidence 44556677899999999999999999998887777666655554444333334444444444445667788999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+.+.++......+|.+++|.+...+.+ ....+++.++..++..+.. ++.||+.
T Consensus 213 ~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp 267 (505)
T TIGR00898 213 QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESP 267 (505)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCCh
Confidence 99999999877777888888876654322 2344555666666655555 4567753
No 149
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.94 E-value=1.7e-08 Score=87.13 Aligned_cols=124 Identities=13% Similarity=0.081 Sum_probs=74.9
Q ss_pred hhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH-hhh-chhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHH
Q 016515 244 ELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL-VFH-QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTG 321 (388)
Q Consensus 244 ~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~ 321 (388)
..+.+.+.|.++||.||+..++.+..+..+..=.. .+. -+.+..+.++ ...........|-..+-+.|.+.-+||
T Consensus 313 sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~l---GLsysllAcslWP~va~~vpE~qLGTa 389 (459)
T KOG4686|consen 313 SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFL---GLSYSLLACSLWPCVASLVPEEQLGTA 389 (459)
T ss_pred hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHH---hhhHHHHHHHHhhhhhhhCCHHHhcch
Confidence 45566778999999999988876655443321111 111 1122222211 111111112345566777888999999
Q ss_pred HHHHHHHHhHhHhHHHHHHHHhhcccchh----HHHHHHHHHHHHHHHHhhcc
Q 016515 322 FGVASSLGKVGGMVCPLVAVGLVTSCHLR----LAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 322 ~~~~~~~~~i~~~~~p~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 370 (388)
.|++.++.++|=.+.|.+++.+.+.-+.+ ..+++++.+++.+..+.+.+
T Consensus 390 ygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 390 YGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 99999999999999999998877654322 23444555556665554444
No 150
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.93 E-value=6.9e-09 Score=100.41 Aligned_cols=135 Identities=11% Similarity=0.057 Sum_probs=93.7
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--hchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
..++..++.+.+|++.||+|||+.+..+.++.++..+.... ..+.....+..+...++....++....+.+|.+|++.
T Consensus 85 ~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~ 164 (465)
T TIGR00894 85 HFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE 164 (465)
T ss_pred HHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH
Confidence 34567888899999999999999988877766555443322 1222222222233333333445566788999999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhccc-chhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
|+++.|+.+....+|..++|.+.+.+.+.. +...++.+.++..++..++.++.++|.
T Consensus 165 r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 165 RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999888877652 555567777776666655555555553
No 151
>PRK09848 glucuronide transporter; Provisional
Probab=98.92 E-value=6.5e-07 Score=86.25 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=64.7
Q ss_pred hhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhcccceeeeeccccccc----
Q 016515 242 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ--SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT---- 315 (388)
Q Consensus 242 ~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~---- 315 (388)
+..+++..+.+++.||+|+|+.+..+..+..+..+.+.... +.+......+....+.....+..+.+.+|..|.
T Consensus 275 ~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 275 VGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 44567788899999999999988877765544333333321 222211112222222223334556677777664
Q ss_pred ---chhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 316 ---SARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 316 ---~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
+.++...|+.+....+|..+++.+.+.+.+
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888999888889999998887766543
No 152
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.90 E-value=6.1e-08 Score=93.85 Aligned_cols=128 Identities=16% Similarity=0.057 Sum_probs=85.1
Q ss_pred HHHHhhhhHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 238 FIASLAELPGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~-~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
....+...++.+++|++.|| +|||++++.+..+.++..+.+....+.............+.....+....+.+|.+|++
T Consensus 55 ~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~ 134 (475)
T TIGR00924 55 GAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERG 134 (475)
T ss_pred HHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCC
Confidence 34455678899999999999 89999998888776665554444332222222222222222223345567888999875
Q ss_pred h---hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHH
Q 016515 317 A---RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIA 365 (388)
Q Consensus 317 ~---R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 365 (388)
. |+++.++.+...++|+.++|.+.+++.+..+....+.+.++..+++.+
T Consensus 135 ~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 135 DMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLL 186 (475)
T ss_pred CcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 4 899999999999999999999998877655545555555544444433
No 153
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.89 E-value=2e-08 Score=96.98 Aligned_cols=138 Identities=19% Similarity=0.141 Sum_probs=88.4
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hchh--HHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSA--VVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
..+..++..++.++.|++.||+|||+.++.+.++..+..+.... .... +......+...++.....+....+.+|.+
T Consensus 77 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 156 (481)
T TIGR00879 77 VSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIA 156 (481)
T ss_pred HHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccC
Confidence 44556677889999999999999999988777665554443322 1111 12222223333333334456678899999
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHH---HHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVA---VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
|++.|+++.++.+....+|..++|.+. ....+..+....+.+.....++.. +..++.||+.
T Consensus 157 ~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~ 220 (481)
T TIGR00879 157 PKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESP 220 (481)
T ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCh
Confidence 999999999999999999999999877 332233333444555444444443 3344457764
No 154
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.2e-06 Score=82.49 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=70.1
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhcccceeeeecccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ--SAVVTTVLLFGVRMCVTGTITVATIYAPEIYP 314 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 314 (388)
........+.+.++...+.+|+|||+++.++..+..+....+.+.. ..+..++..+..........+++|.+.+|..+
T Consensus 278 ~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vD 357 (467)
T COG2211 278 LLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVD 357 (467)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhh
Confidence 3344445566688889999999999999988777666555554432 23333333344445555667788998888754
Q ss_pred -----cchh--hHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 315 -----TSAR--TTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 315 -----~~~R--~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
+..| |...|....+..+|..++..+.+.++.
T Consensus 358 yge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 358 YGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344 444666677777777777666655443
No 155
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=2.6e-07 Score=87.94 Aligned_cols=146 Identities=14% Similarity=0.108 Sum_probs=90.1
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh-----chhHHHHHHHHHHHHhhhcccceeeeeccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH-----QSAVVTTVLLFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 311 (388)
..+..+.+.+..+..|++.||+|.|+++..+....++..+...+. .+.....++.+...+. .+.++......++
T Consensus 76 ~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~ 154 (462)
T PRK15034 76 TALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISF 154 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHH
Confidence 344555666677778999999999998888777766555544432 2222222222222222 3344556677899
Q ss_pred ccccchhhHHHHHHHHHHhHhHhHHHHHHHHhh-----ccc-------------chhHHHHHHHHHHHHHHHHhhccccc
Q 016515 312 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV-----TSC-------------HLRLAVILFEVVFVLAIASSLLFPFE 373 (388)
Q Consensus 312 l~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~-----~~~-------------~~~~~~~i~~~~~~~~~~~~~~~~pe 373 (388)
.||++.|+++.|+....+++|..+++.+.+.+. ... +.....+++....++..++.++..++
T Consensus 155 wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 155 FFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999998888888776665554422 111 12234456777777777666666554
Q ss_pred cc--CcchhhhH
Q 016515 374 TM--GRELKDTV 383 (388)
Q Consensus 374 t~--~~~l~~~~ 383 (388)
.+ +++++|..
T Consensus 235 ~~~~~~~~~~~~ 246 (462)
T PRK15034 235 IASSRASIADQL 246 (462)
T ss_pred ccccccCHHHHH
Confidence 33 23444443
No 156
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.87 E-value=5.5e-08 Score=89.86 Aligned_cols=131 Identities=21% Similarity=0.222 Sum_probs=90.6
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....+...++.++.|++.||+|||+.+..+.....+..+.....++.+......+....+.....+....+.+|.+|++
T Consensus 40 ~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 119 (352)
T cd06174 40 VSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK 119 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc
Confidence 44456667888999999999999999888887776665555444333332222222222332333455667899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHh
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS 367 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 367 (388)
.|+++.++.+....+|+.++|.+.+.+.+..+....+.+.+++.+++.+..
T Consensus 120 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 120 ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988877765544445555555555544443
No 157
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.87 E-value=7.9e-08 Score=90.89 Aligned_cols=133 Identities=12% Similarity=0.019 Sum_probs=86.7
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
....+...+...+.|.+.||+|||++++.+..+.++..+......+. ....+....+.....+....+.+|++|++.
T Consensus 45 ~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~ 121 (393)
T PRK11195 45 MFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK 121 (393)
T ss_pred HHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 34455667788899999999999999988877665443332222221 122222233333445667789999999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
|+++.|+......++..++|.+.+.+.+.. ...++.+...+.+++. +..+..||.+
T Consensus 122 ~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~-~~~~~l~~~~ 177 (393)
T PRK11195 122 LVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAA-LFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 999999999999999999999988877643 2233333333333333 3344556643
No 158
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.84 E-value=8.1e-08 Score=91.57 Aligned_cols=137 Identities=14% Similarity=0.108 Sum_probs=85.4
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---h--hchhHHHHHHHHHHHHhhhcccceeeeeccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F--HQSAVVTTVLLFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 311 (388)
.....+...++.++.|.++||+|||+.++.+....++....+. + ..+.+......+...++.....+....+.+|
T Consensus 58 ~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 137 (417)
T PRK10489 58 VTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPA 137 (417)
T ss_pred HHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 3444566788889999999999999988766554443322221 1 1122222222222222222222344567899
Q ss_pred ccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 312 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 312 l~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
.+|++.|+++.++.+....+|..++|.+.+.+.+..+..+.+.+.++..+++.+.... .||+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 199 (417)
T PRK10489 138 LVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPAL 199 (417)
T ss_pred ccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 9999999999999999899999999998887766544445555555555555444444 4554
No 159
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.83 E-value=5.4e-08 Score=90.96 Aligned_cols=136 Identities=13% Similarity=0.079 Sum_probs=84.9
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..++.+..|.+.||+|||+.++.+.++.++..+......+.+..........++....++.......|.+| +
T Consensus 44 ~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~ 122 (377)
T TIGR00890 44 FTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-D 122 (377)
T ss_pred HHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-c
Confidence 445566778889999999999999999988777666655444443333322222222222222222333445677777 4
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 373 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pe 373 (388)
.|+++.++......+|..+++.+...+.+..+....+.+.++..++..+..+++.+|
T Consensus 123 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 123 KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 699999999888888887765555555554444455666666666665555554433
No 160
>PRK15075 citrate-proton symporter; Provisional
Probab=98.83 E-value=1.9e-07 Score=89.49 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHH--------HHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 245 LPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVV--------TTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 245 ~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.++.++.|++.||+|||+.++.+.....+......+..+... ..+..+...++.....+....+.+|.+|++
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 149 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG 149 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc
Confidence 567889999999999999998888766655554444322211 111122222222223344567899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHH
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVG 342 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~ 342 (388)
.|+++.++.....+++..+++.+...
T Consensus 150 ~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 150 RKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877777666655443
No 161
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.83 E-value=7.7e-09 Score=92.82 Aligned_cols=104 Identities=14% Similarity=0.211 Sum_probs=79.1
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
++.+++++...|.++||+|||++++++.+..++..+......+-...+..-+... ...+-.++.-++.+|+++.+.|+.
T Consensus 78 ~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~G-i~kgnl~v~rAiisdV~sek~r~l 156 (451)
T KOG2615|consen 78 SILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGG-IFKGNLSVIRAIISDVVSEKYRPL 156 (451)
T ss_pred HHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCchHHHHHHHHhhcChhhccc
Confidence 5678889999999999999999999988887775555444333211111123332 224555678899999999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
+++.......+|-+++|.+.+++..
T Consensus 157 ~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 157 GMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred eeeeeehhhhcchhhcchhhhHHHh
Confidence 9999999999999999999887765
No 162
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.82 E-value=6.8e-08 Score=93.81 Aligned_cols=138 Identities=18% Similarity=0.097 Sum_probs=87.5
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh---------chhH---HHHHHHHHHHHhhhcccce
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH---------QSAV---VTTVLLFGVRMCVTGTITV 304 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~~~~~ 304 (388)
.....++..++.++.|++.||+|||++++.+..+..+..+..... .+.. ...+.-+...++..+..+.
T Consensus 61 ~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~ 140 (479)
T PRK10077 61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASML 140 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhH
Confidence 344566778899999999999999999988776654443332221 1111 1112223333444445566
Q ss_pred eeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhh--------cccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 305 ATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 305 ~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
...+.+|.+|++.|+++.++......+|..+++.+...+. +..+....+++.++..++..+. .++.||+.
T Consensus 141 ~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~ 218 (479)
T PRK10077 141 SPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETP 218 (479)
T ss_pred HHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCc
Confidence 7788999999999999999998888888888776544332 1223334555555555555443 44567875
No 163
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.82 E-value=1.4e-07 Score=91.54 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=75.0
Q ss_pred hhHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHhhhcccceeeeecccccccch--hh
Q 016515 244 ELPGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQS-AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA--RT 319 (388)
Q Consensus 244 ~~~~~~~~~~l~d~-~gRr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~--R~ 319 (388)
.....+++|++.|| +|||++++.+..+..+..+......+ .............+.....+....+.+|.||++. |.
T Consensus 63 ~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~ 142 (489)
T PRK10207 63 VYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLD 142 (489)
T ss_pred HHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhh
Confidence 34455689999999 99999999888776665444443322 1111111222222222233455678999999884 57
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHH
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILF 356 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~ 356 (388)
.+.++.+...++|+.++|.+.+++.+..+....|++.
T Consensus 143 ~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~ 179 (489)
T PRK10207 143 GAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC 179 (489)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHH
Confidence 7899999999999999999888887766544455443
No 164
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.81 E-value=5.6e-08 Score=88.80 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=104.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
.....++.+-++=.+.|.++||.+.|+.+..+++.++++.+.+.+..+-....++.+...++-...++.+.-..+..||+
T Consensus 69 i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr 148 (448)
T COG2271 69 LGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR 148 (448)
T ss_pred HHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc
Confidence 34445666778888999999999999999999999999998888765443333444444455445567788889999999
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHH--HHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVA--VGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
+-||+..++=|...++||.+.|.+. ..+....+....+++=++++++-+++.++..+||
T Consensus 149 ~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 149 KERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred cccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998887 6655555555566666677776667777665443
No 165
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.79 E-value=4.3e-07 Score=87.07 Aligned_cols=136 Identities=21% Similarity=0.098 Sum_probs=82.2
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchh--------HHHHHHHHHHHHhhhcccceeeeecc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSA--------VVTTVLLFGVRMCVTGTITVATIYAP 310 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
...++..+|.++.|++.||+|||+.+..+....++..+...+..+. .....+-+...++..+.++....+.+
T Consensus 71 ~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~ 150 (432)
T PRK10406 71 AGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMS 150 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHH
Confidence 3344556899999999999999999988887776655554432211 11222223333343445566778999
Q ss_pred cccccchhhHHHHHHHHHHhHhHhHHHHHHHHhh--------cccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 311 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV--------TSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 311 El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
|.+|++.|+++.++.......|..+++.+...+. +..+...++++.++..++. ++.....||++
T Consensus 151 e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~ 222 (432)
T PRK10406 151 EVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETS 222 (432)
T ss_pred HhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 9999999999988876655566666654433221 1223334454444444443 33334456764
No 166
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.78 E-value=2.4e-07 Score=87.69 Aligned_cols=123 Identities=11% Similarity=-0.037 Sum_probs=76.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---hhch-----hHHHHHHHHHHHHhhhcccceeeee
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQS-----AVVTTVLLFGVRMCVTGTITVATIY 308 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (388)
.....+...++.++.|+++||+|||++++.+.+..++..+... ...+ .....+..+....+.....+....+
T Consensus 57 ~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 136 (399)
T PRK05122 57 ISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILW 136 (399)
T ss_pred HHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHH
Confidence 3444566678888999999999999999888765544322221 1111 1111112222222222223344556
Q ss_pred cccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHH
Q 016515 309 APEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVV 359 (388)
Q Consensus 309 ~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~ 359 (388)
..|.+|.+.|+++.++......+|..++|.+.+.+.+..+....+++..++
T Consensus 137 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~ 187 (399)
T PRK05122 137 GIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLL 187 (399)
T ss_pred HHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 789999999999999988877888888888877776655544333333333
No 167
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.78 E-value=6e-08 Score=93.91 Aligned_cols=133 Identities=14% Similarity=0.016 Sum_probs=83.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-----hchhHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-----HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
...++..++.+..|++.||+|||+++..+.+..++....+.. ..+......+.+...++....++....+.+|.+
T Consensus 72 ~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (467)
T PRK09556 72 GFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT 151 (467)
T ss_pred HHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc
Confidence 345566788899999999999999988777665554443322 122222222223333333334455667899999
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhccc---chhHHHHHHHHHHHHHHHHhhccc
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC---HLRLAVILFEVVFVLAIASSLLFP 371 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~ 371 (388)
|++.|+++.|+....+.+|+.+++.+...+.... +....+.+.+++.++.++..+++.
T Consensus 152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~ 212 (467)
T PRK09556 152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYG 212 (467)
T ss_pred CccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999988899988887765444321 122334444555544444444443
No 168
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.78 E-value=2.8e-06 Score=79.15 Aligned_cols=138 Identities=13% Similarity=0.112 Sum_probs=91.2
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
+..+.+++...++.++.+|+|.|+.++++..+..+=++......+.+.....-..-..-.........-|.++.+|++..
T Consensus 267 ~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rls 346 (412)
T PF01306_consen 267 VQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLS 346 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGH
T ss_pred HHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHH
Confidence 44556788899999999999999998887776665444444433333221111110000001112345588999999999
Q ss_pred hHHHHHHHHH-HhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 319 TTGFGVASSL-GKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 319 ~~~~~~~~~~-~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
+|...+...+ ..++..+.+.+.+.+.|..+....+++.+.+.+...++..+.+++.+.
T Consensus 347 At~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 347 ATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 9999998655 468888888889999998876678888888888888888877765544
No 169
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.76 E-value=2.6e-07 Score=89.82 Aligned_cols=135 Identities=16% Similarity=0.174 Sum_probs=90.4
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---h-h-chhHHHHHHHHHHHHhhhcccceeeeecccccc
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F-H-QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP 314 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 314 (388)
..+-.++-++.+|.++||+.||++++.+-+..++....+. . . .+.+....+.+....+.....+...++.+|+.|
T Consensus 54 ~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~ 133 (524)
T PF05977_consen 54 STLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVP 133 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3444556778899999999999999887765544322221 1 1 122333333333333333333556688999999
Q ss_pred cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 315 TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 315 ~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
.+.-..++++.....++...++|.+.+.+....+....+.+-+++.+++.+......++.
T Consensus 134 ~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~ 193 (524)
T PF05977_consen 134 KEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP 193 (524)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 999999999999999999999999998887766666667666666666555555544443
No 170
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.76 E-value=2.1e-07 Score=88.26 Aligned_cols=112 Identities=7% Similarity=0.014 Sum_probs=71.5
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---hhchhHHH-HHHHHHHHHhhhcccceeeeecccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQSAVVT-TVLLFGVRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~El 312 (388)
.....++..++.++.|.+.||+|||+.+..+..+.++..+... ....+... ....+....+.....+....+..|.
T Consensus 54 ~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~ 133 (402)
T TIGR00897 54 FTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYN 133 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHh
Confidence 4455677788999999999999999998887766555433221 11122221 1122221111111222233456788
Q ss_pred cccchhhHHHHHHHHHHhHhH-hHHHHHHHHhhcccc
Q 016515 313 YPTSARTTGFGVASSLGKVGG-MVCPLVAVGLVTSCH 348 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~~i~~-~~~p~~~~~~~~~~~ 348 (388)
+|++.|+++.|+.+....+|. .++|.+.+.+.+..+
T Consensus 134 ~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 134 TKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999999999999988886 577877766665544
No 171
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.75 E-value=7.9e-08 Score=76.12 Aligned_cols=101 Identities=25% Similarity=0.310 Sum_probs=82.8
Q ss_pred hhhhhhhhcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 4 SVAGLLSSFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 4 ~i~~~l~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
.++.++..++++++.+.+.+++.|++.+.. +....++.|..|+++|++..+..+....+|..+++.+...+.+..+||+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 118 (141)
T TIGR00880 39 VLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRA 118 (141)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHH
Confidence 344555667789999999999999998865 5667889999999999999999999999999999999888888889999
Q ss_pred HHHHhhHHHHHHH-HHHhcCCCC
Q 016515 83 LLAFSSVPSFALL-LFYGLAPES 104 (388)
Q Consensus 83 ~f~~~~i~~l~~~-~~~~~~pES 104 (388)
.+++.++..++.. ...+..||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 119 PFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCC
Confidence 9988877766554 344555664
No 172
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.74 E-value=4.7e-07 Score=83.47 Aligned_cols=136 Identities=13% Similarity=0.047 Sum_probs=103.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..++.++..++..+...+.||+.||++++..+.+..+.-+......+....+..-++..+.-...+++...+.+++.|++
T Consensus 54 is~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~ 133 (394)
T COG2814 54 ITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPG 133 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 44556677888999999999999999998777666555554444444444444445544444556678888999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 372 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p 372 (388)
.|+++.++...--.+..+++..+..++-+..++-.+|+..+.+++++.+..+..+|
T Consensus 134 ~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 134 KRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred chhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999988777777777666666666667677888889999999888888888
No 173
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.74 E-value=8.3e-07 Score=81.28 Aligned_cols=138 Identities=20% Similarity=0.199 Sum_probs=94.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--hchhHHHHHHHHHHH-Hhhhcccceeeeecc
Q 016515 234 YVDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQSAVVTTVLLFGVR-MCVTGTITVATIYAP 310 (388)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 310 (388)
.+...++.+.+.+.-+.-|++.||+|-|+....++....+-.+.+.+ ...+... .+.+... -...+.+++.-.+.+
T Consensus 52 ~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~-ll~~gll~G~~GasFav~m~~~s 130 (417)
T COG2223 52 GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQ-LLVIGLLLGLAGASFAVGMPNAS 130 (417)
T ss_pred HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHH-HHHHHHHHhcccceehccccccc
Confidence 34445555666666778899999999999888877776554444333 2222211 1122211 122345566778899
Q ss_pred cccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc---hhHHHHHHHHHHHHHHHHhhccccc
Q 016515 311 EIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH---LRLAVILFEVVFVLAIASSLLFPFE 373 (388)
Q Consensus 311 El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~pe 373 (388)
+.||++.++++.|+.- .|++|..+..++.+.+....+ ......++....++..+..++...|
T Consensus 131 ~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 131 FFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred ccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999 999999998888887776655 4556677777777777777766433
No 174
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.73 E-value=7.1e-07 Score=84.06 Aligned_cols=111 Identities=13% Similarity=-0.035 Sum_probs=74.3
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
......++..++.++.|++.||+|||+.+..+.+...+........++.+...+..+....+.....+.......+..|+
T Consensus 46 ~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 125 (381)
T PRK03633 46 VSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTS 125 (381)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 34445667788899999999999999998887776665544444433333322322222222222223333445677888
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
+.|+++.+..+....+|..++|.+.+.+.+.
T Consensus 126 ~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 126 RNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999888765543
No 175
>PRK09952 shikimate transporter; Provisional
Probab=98.70 E-value=2.7e-07 Score=88.56 Aligned_cols=103 Identities=17% Similarity=0.030 Sum_probs=69.9
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhH--------HHHHHHHHHHHhhhcccceeeeeccc
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAV--------VTTVLLFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~E 311 (388)
..+...+|.++.|++.||+|||+.++.+..+.++..+...+..+.. ....+.+...++..+.++....+.+|
T Consensus 73 ~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 73 GFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 3445678889999999999999999988877776665555433211 11122233333333444555678999
Q ss_pred ccccchhhHHHHHHHHHHhHhHhHHHHHHHH
Q 016515 312 IYPTSARTTGFGVASSLGKVGGMVCPLVAVG 342 (388)
Q Consensus 312 l~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~ 342 (388)
.+|++.|++..+.......+|..+++.+...
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~ 183 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLSTGLVSL 183 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888877767777776554443
No 176
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.70 E-value=3.8e-07 Score=87.97 Aligned_cols=130 Identities=12% Similarity=0.063 Sum_probs=83.4
Q ss_pred hhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHH-HHHHHhhhcccceeeeecccccccchhhH
Q 016515 242 LAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLL-FGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 242 ~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
+...++..+.|+++||+|||+.++.+.+...+..+......+.+...... +...++..........+..|.+| +.|++
T Consensus 65 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~ 143 (455)
T TIGR00892 65 AVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPL 143 (455)
T ss_pred HHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHH
Confidence 34466778899999999999998887766555444433332222211111 11111111112333456678886 78999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPF 372 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p 372 (388)
+.|+.+....+|+.++|.+.+.+.+..+...++++.+++.+++.+..++..|
T Consensus 144 a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 144 ANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988887777666556777777766655554444433
No 177
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.69 E-value=6.5e-07 Score=87.29 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=71.8
Q ss_pred HHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHhhhcccceeeeecccccccch--hhHHH
Q 016515 247 GLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFHQS-AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA--RTTGF 322 (388)
Q Consensus 247 ~~~~~~~l~d~-~gRr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~--R~~~~ 322 (388)
..+++|++.|| +|||+.++.+.++.++....+....+ .............+.....+....+.+|.||++. |..+.
T Consensus 73 ~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~ 152 (500)
T PRK09584 73 LVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAF 152 (500)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcc
Confidence 34678999999 59999998887766554444433222 1111111122222222233445578899998653 45678
Q ss_pred HHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHH
Q 016515 323 GVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEV 358 (388)
Q Consensus 323 ~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~ 358 (388)
++.+...++|+.++|.+.+++.+..+....+.+.++
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i 188 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVV 188 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 888899999999999999988776665555555443
No 178
>PRK12382 putative transporter; Provisional
Probab=98.67 E-value=5.7e-07 Score=85.01 Aligned_cols=112 Identities=12% Similarity=-0.050 Sum_probs=70.3
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---h-h----chhHHHHHHHHHHHHhhhcccceeeee
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F-H----QSAVVTTVLLFGVRMCVTGTITVATIY 308 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (388)
.....+...++.+..|+++||+|||+.++.+.....+..+... . . .+.....+..+....+.....+....+
T Consensus 57 ~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 136 (392)
T PRK12382 57 VGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTW 136 (392)
T ss_pred HHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556677888999999999999998887665544322211 1 1 111111122222222222222334456
Q ss_pred cccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc
Q 016515 309 APEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH 348 (388)
Q Consensus 309 ~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~ 348 (388)
..|.+|++.|+++.++......++..++|.+.+.+.+..+
T Consensus 137 ~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 137 GLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 7899999999999999887777888888888776655444
No 179
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.66 E-value=3.2e-07 Score=85.93 Aligned_cols=137 Identities=15% Similarity=0.077 Sum_probs=82.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHH-HHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVL-MFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
...+...+.....|.++||+|||+.++. +.....+..+......+.+......+....+.....+....+..|..|++.
T Consensus 41 ~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~ 120 (375)
T TIGR00899 41 GSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG 120 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc
Confidence 3344566677888999999999886554 333333333333333332222222222212222223334456778888877
Q ss_pred hhHH--HHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 318 RTTG--FGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 318 R~~~--~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
|+.+ .+.....+.+|..++|.+.+.+.+..+....+++.+.+.++..+..++..||.+
T Consensus 121 ~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 121 REAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred hhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 7755 567777778889999988887776655556677777777777666666566654
No 180
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.62 E-value=5.7e-07 Score=85.08 Aligned_cols=124 Identities=8% Similarity=-0.013 Sum_probs=82.0
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
....++...+.+..+++.||+|||++++.+..+.++..+...+.++........+...++.....+....+..|.+| +.
T Consensus 51 s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~ 129 (393)
T PRK09705 51 ALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR 129 (393)
T ss_pred HHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc
Confidence 34455667888999999999999999999988887776666554443332333333333333333445567788887 67
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhccc-chhHHHHHHHHHHHH
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEVVFVL 362 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~-~~~~~~~i~~~~~~~ 362 (388)
|+++.|+.......|+.+++.+.+.+.+.. +....+.++++..++
T Consensus 130 ~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 130 TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 999999998888888888888777665543 223334444444333
No 181
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=2.1e-06 Score=81.60 Aligned_cols=108 Identities=19% Similarity=0.092 Sum_probs=73.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh---hchhHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF---HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
.....++..++++..+++.||+|||+.++.+..+.++....+.. ..+.+......+....+.....+....+..|+.
T Consensus 44 ~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~ 123 (410)
T TIGR00885 44 QSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG 123 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC
Confidence 44556677889999999999999999998887766554443322 112222222222222222223334456778889
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHHHHhh
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVAVGLV 344 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~ 344 (388)
|++.|++..++.+.+..+|+.++|.+...+.
T Consensus 124 ~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 124 PESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877654
No 182
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.61 E-value=7.5e-07 Score=83.72 Aligned_cols=101 Identities=22% Similarity=0.168 Sum_probs=67.6
Q ss_pred hhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhH----H----HHHHHHHHHHhhhcccceeeeecccccc
Q 016515 243 AELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAV----V----TTVLLFGVRMCVTGTITVATIYAPEIYP 314 (388)
Q Consensus 243 ~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~El~p 314 (388)
...++.++.|++.||+|||+.++.+.++..+..+......+.. . .....+...++.....+....+.+|.+|
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~ 126 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAP 126 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCC
Confidence 3356888999999999999999888776665544443322211 0 1111122222222334456678999999
Q ss_pred cchhhHHHHHHHHHHhHhHhHHHHHHHHh
Q 016515 315 TSARTTGFGVASSLGKVGGMVCPLVAVGL 343 (388)
Q Consensus 315 ~~~R~~~~~~~~~~~~i~~~~~p~~~~~~ 343 (388)
++.|++..++......+|..++|.+...+
T Consensus 127 ~~~r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 127 PGKRGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888888888765443
No 183
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.61 E-value=1.1e-07 Score=86.00 Aligned_cols=139 Identities=19% Similarity=0.139 Sum_probs=106.2
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch-
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA- 317 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~- 317 (388)
.-.+.+++.+.+.|.+.||+|+|..++++++......+.+.+.++.....+.-.....+..........+.++.||.+.
T Consensus 114 skA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e 193 (464)
T KOG3764|consen 114 SKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE 193 (464)
T ss_pred HHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh
Confidence 3456678888899999999999999999998887777777776665433333333222222223344568899999887
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCc
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGR 377 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~ 377 (388)
|++++|+.-.+..+|-.++|.+.+.+++..+...+|++.++++++...+.++..+.++.+
T Consensus 194 r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 194 RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 699999999999999999999999888888899999999999998888777766544433
No 184
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.60 E-value=1.6e-06 Score=93.28 Aligned_cols=135 Identities=10% Similarity=-0.036 Sum_probs=83.7
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHH--HHHhh-hchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFL--LPLVF-HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
+..+..++.+.++|.++||+|||+++.....+...+. ..+.+ ..+.+...++.++...+.....+....+.+|++|.
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~ 139 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNK 139 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCc
Confidence 3345567778889999999999997643222211111 11111 22333333333343334344556778899999999
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
+.|++++|+.+....+|..++|.+.+.+....+....+ +..+...+.++.+.+..|++
T Consensus 140 ~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 140 DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999999999887765544333 33333333333333344554
No 185
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.59 E-value=1.8e-06 Score=93.11 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=74.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---hhchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
+..+..+++++++|+++||+|||++++.+.++..+..+... ...+.+...+..++..++.....+....+.+|++|.
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 134 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGK 134 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCc
Confidence 34455677888999999999999999877655443332222 122222222233333333333445567899999999
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
+.|+++.|+......+|..++|.+.+.+...
T Consensus 135 ~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 135 ENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999888776654
No 186
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.57 E-value=5.2e-08 Score=89.89 Aligned_cols=143 Identities=14% Similarity=0.039 Sum_probs=101.2
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
.-.+...+++.++|++.||++||+++.++.++-.+..+...+.+..+..+++-.+...+-....++...+.+++||...|
T Consensus 76 vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~R 155 (493)
T KOG1330|consen 76 VFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKR 155 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhh
Confidence 34556678889999999999999999999888877777666555545444444443333344557788999999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccc-hhHHHHHHHHHHHHHHHHhhcccccccCcchhh
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCH-LRLAVILFEVVFVLAIASSLLFPFETMGRELKD 381 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~ 381 (388)
++..++.|.+..+|+.++-.....+..... ..+.+..-+++.++.++++.++.+|..++.-||
T Consensus 156 s~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred hHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 999999999988887776433333222222 334566677788888888877777776543333
No 187
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.55 E-value=1.3e-06 Score=85.71 Aligned_cols=138 Identities=22% Similarity=0.199 Sum_probs=93.9
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
.....++..++.++.|+++|++|||+.++.+.+...+-.+......+.......-+...++..+...+...|.+|+-|++
T Consensus 95 ~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~ 174 (513)
T KOG0254|consen 95 TSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAH 174 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChh
Confidence 44556778999999999999999999998887776666655555444433334344444444444456788999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhccc--chhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSC--HLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
.|+.-.++......+|..++ ++.++..... +.-..+.+..+.+++..+. .+..||+.+
T Consensus 175 ~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~ 234 (513)
T KOG0254|consen 175 IRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPR 234 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChH
Confidence 99999999988877666666 5555444332 2223445555666666666 555678653
No 188
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.55 E-value=1.1e-06 Score=83.52 Aligned_cols=134 Identities=16% Similarity=0.127 Sum_probs=80.1
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh---chhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH---QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.+++++|++.++.+.||+|||..+..+.+...+..+.+... +.......--+...............|..|+-|.+.
T Consensus 70 ~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~ 149 (485)
T KOG0569|consen 70 FIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNL 149 (485)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh
Confidence 45678899999999999999988877666555444443321 111122222222222222233456789999999999
Q ss_pred hhHHHHHHHHHHhHhHhHHHHHH-HHhhcccchhHHH--HHHHHHHHHHHHHhhcccccccC
Q 016515 318 RTTGFGVASSLGKVGGMVCPLVA-VGLVTSCHLRLAV--ILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 318 R~~~~~~~~~~~~i~~~~~p~~~-~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
||....+......+|..++..+. +.+..... .|++ ....+.+++. ++.+...||+.+
T Consensus 150 RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~-~W~~l~~~~~i~~~~~-l~~l~~~PESPk 209 (485)
T KOG0569|consen 150 RGALGTLLQIGVVIGILLGQVLGLPSLLGTED-LWPYLLAFPLIPALLQ-LALLPFLPESPK 209 (485)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCc-chHHHHHHHHHHHHHH-HHHHhcCCCCcc
Confidence 99999888888888887774433 33343322 2232 2223333444 344445688753
No 189
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.54 E-value=3.6e-06 Score=81.97 Aligned_cols=129 Identities=15% Similarity=0.156 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHh-----chhHHHH-HHHHHHHHHHHHHhhh---chhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 246 PGLILSAIIVDKI-----GRKLSMV-LMFVSACIFLLPLVFH---QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 246 ~~~~~~~~l~d~~-----gRr~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
++.++.+.++||+ |||+.++ .+....+++...+.+. .+.+..........++..........+.+|.+|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5788899999999 9998644 4444444443333332 12122222222222333333344568899999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhc-ccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVT-SCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.|+++.++.....++|..+++.+...+.+ ..+....+++.+++.++..+..++ .||+.
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~ 198 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPT 198 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCc
Confidence 99999999999999999999888777766 335555666666666666554444 57764
No 190
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.54 E-value=3.9e-06 Score=81.89 Aligned_cols=148 Identities=15% Similarity=0.198 Sum_probs=82.0
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch-hHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS-AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
....+...++..+.|.++|.+|||...+.+.++..+-.+...-.++ +.......+. ... .+...+.....+|+.|.+
T Consensus 85 ~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~-Gvg-aG~~~~~~~~isEl~p~k 162 (599)
T PF06609_consen 85 TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY-GVG-AGVQELAALAISELVPNK 162 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH-HHh-hHHHHHHHHHHHHhcccc
Confidence 3345666778888999999999999998887766554433332222 2221111111 111 122223455689999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHh-hcc-ccccc---C--cchhhhHHhhh
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS-LLF-PFETM---G--RELKDTVDAIE 387 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~-~pet~---~--~~l~~~~~~~~ 387 (388)
.|..+.++.....-+....+|.+...+....+.-+.+.++.+...++.+.. .++ +|+.+ + .+..|...|+|
T Consensus 163 ~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD 240 (599)
T PF06609_consen 163 WRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELD 240 (599)
T ss_pred hhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhh
Confidence 999888777655444444566665544333222344555554444443322 233 44321 2 23456677776
No 191
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.53 E-value=4.7e-06 Score=77.02 Aligned_cols=145 Identities=19% Similarity=0.139 Sum_probs=88.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhch-hHHHHHHHHHHHHHHHHH-hh---hchhHHHHHHHHHHHHhhhcccceeeeeccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGR-KLSMVLMFVSACIFLLPL-VF---HQSAVVTTVLLFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gR-r~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 311 (388)
..+..+.+.++++++|.+.||.+. |.+++.......+....+ .. ....+..........++..+..++-.-+..|
T Consensus 307 g~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE 386 (480)
T KOG2563|consen 307 GALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVE 386 (480)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeee
Confidence 344456678899999999999865 333443333333321111 11 1111221122223345556667777778889
Q ss_pred ccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc----hhHHHHHHHHHHHHHHHHhhcccccccCcchhh
Q 016515 312 IYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH----LRLAVILFEVVFVLAIASSLLFPFETMGRELKD 381 (388)
Q Consensus 312 l~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~~ 381 (388)
..=|..-++..|+.+..+++.+++-+++-+......+ ....-+.....+++....+.++.|+-+++..|+
T Consensus 387 ~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e~ 460 (480)
T KOG2563|consen 387 TTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAEA 460 (480)
T ss_pred eccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhhh
Confidence 8777778899999999999999888877776555544 222234444555666667777777777666554
No 192
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.52 E-value=2.1e-06 Score=79.94 Aligned_cols=128 Identities=18% Similarity=0.152 Sum_probs=79.8
Q ss_pred HHHHHHHHHHh-----chhHHH-HHHHHHHHHHHHHHhhhc--hh-HHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 248 LILSAIIVDKI-----GRKLSM-VLMFVSACIFLLPLVFHQ--SA-VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 248 ~~~~~~l~d~~-----gRr~~~-~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
.++.|.++||+ |||+.+ +.+....++....+.+.. .. +......+....+..........+.+|.+|++.|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 67899999998 898875 444444444433333321 11 1111222222222222233456689999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcccc--------hhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTSCH--------LRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
+.+.++......+|..++|.+.+.+....+ ....+++.+++.+++.+...+..||.+
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999998888999989888876665544 344566666666666555555556754
No 193
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.51 E-value=4.5e-06 Score=80.05 Aligned_cols=139 Identities=12% Similarity=0.095 Sum_probs=83.4
Q ss_pred HHHHHhhhhHHHHHHHHHHH----HhchhHHHHHH-HHHHHHHHHHHhhhch--------------hH---HHHHHHHHH
Q 016515 237 VFIASLAELPGLILSAIIVD----KIGRKLSMVLM-FVSACIFLLPLVFHQS--------------AV---VTTVLLFGV 294 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d----~~gRr~~~~~~-~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~ 294 (388)
..+..+...+...+.|+++| |+|||+.++.. .....+....+....+ .. ..+......
T Consensus 45 ~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll 124 (477)
T TIGR01301 45 WLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL 124 (477)
T ss_pred HHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 44556667778888999999 59999988764 3333333333322111 00 111111111
Q ss_pred HHhhhcccceeeeecccccccchh--hHHHHHHHHHHhHhHhHHHHHHHHhh--cc--------c-----chhHHHHHHH
Q 016515 295 RMCVTGTITVATIYAPEIYPTSAR--TTGFGVASSLGKVGGMVCPLVAVGLV--TS--------C-----HLRLAVILFE 357 (388)
Q Consensus 295 ~~~~~~~~~~~~~~~~El~p~~~R--~~~~~~~~~~~~i~~~~~p~~~~~~~--~~--------~-----~~~~~~~i~~ 357 (388)
.++.+...+..-++.+|+.|++.| +.+.++.+....+|+.+++.+.+... .. . +....|.+-+
T Consensus 125 d~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a 204 (477)
T TIGR01301 125 DVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDI 204 (477)
T ss_pred HHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHH
Confidence 223232333456789999999876 46888888888899988887654321 10 0 1123455666
Q ss_pred HHHHHHHHHhhccccccc
Q 016515 358 VVFVLAIASSLLFPFETM 375 (388)
Q Consensus 358 ~~~~~~~~~~~~~~pet~ 375 (388)
++.+++.++..+..+|..
T Consensus 205 ~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 205 ILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHeeeeeccC
Confidence 667788888888888865
No 194
>PRK10133 L-fucose transporter; Provisional
Probab=98.47 E-value=1.3e-05 Score=77.02 Aligned_cols=108 Identities=13% Similarity=0.060 Sum_probs=71.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---hhchhHHHHHHHHHHHHhhhcccceeeeecccc
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQSAVVTTVLLFGVRMCVTGTITVATIYAPEI 312 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 312 (388)
......++..++.+..|.+.||+|||+++..+..+..+..+... ...+........+....+..........+..|.
T Consensus 66 ~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~ 145 (438)
T PRK10133 66 IQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL 145 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 34455677788999999999999999999988776665544331 222222222223333333333334455566787
Q ss_pred cccchhhHHHHHHHHHHhHhHhHHHHHHHHh
Q 016515 313 YPTSARTTGFGVASSLGKVGGMVCPLVAVGL 343 (388)
Q Consensus 313 ~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~ 343 (388)
.|.+.|....++.+.+..+|..++|.+...+
T Consensus 146 ~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 146 GPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788999988889999988776543
No 195
>PTZ00207 hypothetical protein; Provisional
Probab=98.47 E-value=9.7e-06 Score=79.54 Aligned_cols=121 Identities=14% Similarity=0.135 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh------chhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 247 GLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH------QSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 247 ~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
..+.+|++.||+|||++++++.+...+..+..... .+.+...++.+....+....+........+.|| +.|++
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~ 155 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGA 155 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHH
Confidence 45568999999999999998887766655444432 122221122222222222222334456788897 67999
Q ss_pred HHHHHHHHHhHhHhH-HHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcc
Q 016515 321 GFGVASSLGKVGGMV-CPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLF 370 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~-~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 370 (388)
+.|+......+|+.+ +|..... ... +....+++.++..++..++.+.+
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l-~~~-~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAF-FSD-NTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHH-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999875 4444443 332 23344555555555444444443
No 196
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.46 E-value=0.00018 Score=69.46 Aligned_cols=75 Identities=15% Similarity=0.140 Sum_probs=56.3
Q ss_pred HHHHHHHhhccCcch-hhHHHHHHhhcccC--chhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHHH
Q 016515 19 LVIFRCFVGVGLGGV-PVFLAYFLEFVPVS--HRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA 93 (388)
Q Consensus 19 l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~--~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l~ 93 (388)
++++-.+.++|.|.. +...+++.|..|++ +|....++......+|..+++.+...+.+..|||+.|.++++..++
T Consensus 103 ~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l 180 (493)
T PRK15462 103 LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIA 180 (493)
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHH
Confidence 343433444555543 55567899999986 6888888888888899999999998888888999999987764433
No 197
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.44 E-value=1.6e-05 Score=75.86 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=75.6
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh-hchhHH--HHHH-HHHHHHhhhcccceeeeeccc
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF-HQSAVV--TTVL-LFGVRMCVTGTITVATIYAPE 311 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~E 311 (388)
...+..+...++.++.|++.||+|||+.++.+..+..+....... ...... .... ...........+........+
T Consensus 51 ~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (420)
T PRK09528 51 IFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEA 130 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhh
Confidence 344556677888999999999999999887655444332221111 000000 0011 111111111111111111222
Q ss_pred ccc--cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 312 IYP--TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 312 l~p--~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
..+ .+.|+...|..+..+.+|..++|.+.+.+.+. +...++++.+++++++.+..++..||.
T Consensus 131 ~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 131 YIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred HHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccc
Confidence 222 23456677888888899999999988877654 445566666666666666666555443
No 198
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.43 E-value=4.7e-06 Score=77.59 Aligned_cols=108 Identities=10% Similarity=-0.029 Sum_probs=69.9
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++..++.+..+++.||+|||+.++.+.+...+..+.. ...+........+...++.....+....+..|.+| +
T Consensus 41 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~ 118 (355)
T TIGR00896 41 TALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-Q 118 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-c
Confidence 344566678889999999999999999888766554433332 22222222222222222222222344556788887 5
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
.|+++.++.+....+|..++|.+.+.+.+.
T Consensus 119 ~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 148 (355)
T TIGR00896 119 RVGLMTGLYSMALMGGAALAAAATVPLAQH 148 (355)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 799999999998889998888877766554
No 199
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.39 E-value=2.4e-05 Score=74.00 Aligned_cols=132 Identities=13% Similarity=0.067 Sum_probs=73.6
Q ss_pred hhhHHHHHHHHHHHHhchhHHHH-HHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhh--
Q 016515 243 AELPGLILSAIIVDKIGRKLSMV-LMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSART-- 319 (388)
Q Consensus 243 ~~~~~~~~~~~l~d~~gRr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~-- 319 (388)
..+.+.+.+++ .||+|||+.++ .+....++.........+.+...+.............+....+..|..|++.|.
T Consensus 64 ~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (393)
T PRK15011 64 GILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAV 142 (393)
T ss_pred HHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHH
Confidence 34455666666 99999998754 333333332222223222222111111111111122233345566666665553
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
...++.+....+|..++|.+.+.+.+..+....+++.++..++..+.+++..||.+
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 23467777788999999999888776666666666666666666666666667654
No 200
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.38 E-value=2e-05 Score=75.38 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=61.1
Q ss_pred cHHHHHHHHHHhhccCcch-hhHHHHHHhhcc--cCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHH
Q 016515 15 NYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVP--VSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPS 91 (388)
Q Consensus 15 ~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p--~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~ 91 (388)
+.....++=++..+|.... ..+-+.+.|... ++.||..++.......+|.+++..+++...+..++|..|.+.++..
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALP 164 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHH
Confidence 3445555555555555443 344567778763 3348888999889999999999999888888889999998887655
Q ss_pred HHHHH-HHhcCCC
Q 016515 92 FALLL-FYGLAPE 103 (388)
Q Consensus 92 l~~~~-~~~~~pE 103 (388)
++..+ ..+..+|
T Consensus 165 ~l~~~~~~~~~~e 177 (433)
T PF03092_consen 165 LLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHhhhh
Confidence 55433 4444454
No 201
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.33 E-value=9.5e-06 Score=76.53 Aligned_cols=130 Identities=16% Similarity=0.164 Sum_probs=87.0
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
..++.++.+.+|++.||+|-|+++..+.+..+++...+.+..+.....+.-+...++-...+ ..+.+....+|++.|++
T Consensus 72 ~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~r 150 (511)
T TIGR00806 72 PYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQR 150 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHH
Confidence 44567788899999999999999998888877777666654333222222233222222333 66788999999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHH--HHHHHHHHHHHHHhhccc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAV--ILFEVVFVLAIASSLLFP 371 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~ 371 (388)
++|+.++...+|.++++.+...+....+..... .+-.....++.++.+++|
T Consensus 151 atsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999988887744322222211 222233345555555554
No 202
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.33 E-value=6.1e-06 Score=82.63 Aligned_cols=106 Identities=12% Similarity=0.063 Sum_probs=71.9
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc-------------------------------------
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ------------------------------------- 282 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~------------------------------------- 282 (388)
..++..++.++.+++.||.|||+.+.++.++.++..+.+..++
T Consensus 77 ~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 156 (633)
T TIGR00805 77 YEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPT 156 (633)
T ss_pred hhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCcccc
Confidence 3456677888999999999999988777665554443332210
Q ss_pred ------------h-hH-HHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 283 ------------S-AV-VTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 283 ------------~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
. .. ..++.-+...++....+++...+..|.+|++.|++..|+.+....+|..+++.+.+.+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 157 QCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred ccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 0 00 011112222233334445677899999999999999999999999999999888776654
No 203
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.32 E-value=9.3e-06 Score=77.80 Aligned_cols=131 Identities=15% Similarity=0.103 Sum_probs=97.0
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHH--hhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchh
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPL--VFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSAR 318 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R 318 (388)
..+.+++.+-++++.||+|-|+++..+.+++++..+.+ ....+.+...+.-+...+.....++....+.+...|++-|
T Consensus 83 ~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Er 162 (466)
T KOG2532|consen 83 FWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNER 162 (466)
T ss_pred HHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHH
Confidence 45678888889999999999999988877776644433 3333323334444555555556678888999999999999
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhcc-cchhHHHHHHHHHHHHHHHHhhccc
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFP 371 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 371 (388)
++..++.++...+|.+++-.+.+.+-+. .|....|.+++++.++-.++.+++.
T Consensus 163 s~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 163 STFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998876577877776 6667778888888776655544443
No 204
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.27 E-value=4.4e-05 Score=72.44 Aligned_cols=130 Identities=17% Similarity=0.138 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHh-----chhH-HHHHHHHHHHHHHHHHhhhc--hhHH-HHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 245 LPGLILSAIIVDKI-----GRKL-SMVLMFVSACIFLLPLVFHQ--SAVV-TTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 245 ~~~~~~~~~l~d~~-----gRr~-~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
.+..++.|.++||+ |||+ .++.+....+++...+.+.. ...+ ...+.+...++.....+....+.+|.+|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 56778899999999 8876 45555555544444433321 2222 12222222222223334566789999999
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHhhcc-cchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGLVTS-CHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
+.|+++.++......+|..+++.+...+.+. .+....+++.++..+++.+.. +..||++
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~ 185 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPE 185 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCc
Confidence 9999999999988888888888877766664 244455666666655554433 3456654
No 205
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.26 E-value=5.9e-06 Score=78.19 Aligned_cols=60 Identities=25% Similarity=0.379 Sum_probs=52.7
Q ss_pred cHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016515 15 NYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 74 (388)
Q Consensus 15 ~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~ 74 (388)
..+.++++|++.|+|.|.....=.|++.....+.|.++.+....+..+|.++||.+..++
T Consensus 129 ~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 129 VKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred hHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 567899999999999998766668999999999999999999999999999998887665
No 206
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.24 E-value=5.5e-05 Score=71.61 Aligned_cols=136 Identities=16% Similarity=0.168 Sum_probs=74.7
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---hhc----hhHHH-HHHHHHHHHhhhcccceeee
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---FHQ----SAVVT-TVLLFGVRMCVTGTITVATI 307 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~ 307 (388)
...+..+...++.+..|+++||+|||+.++.+....++...... ... ..... ....+..........+....
T Consensus 43 ~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 122 (396)
T TIGR00882 43 VFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA 122 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Confidence 34556677788899999999999999988766554433222211 111 01110 01011111111111222222
Q ss_pred ecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 308 YAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 308 ~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
+..|.- +.++...|..+..+.+|..++|.+.+.+.+. +...++++.+++.++..++.+...||.
T Consensus 123 ~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 123 YIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI-DPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc-CchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 333322 2234466778888889999999887765443 455567666666666655555544553
No 207
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.17 E-value=2.1e-08 Score=96.59 Aligned_cols=104 Identities=17% Similarity=0.244 Sum_probs=75.0
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhc---hhHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQ---SAVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
.....++.++|+++.|++.||+|||+.++.+.++..+..+...+.. +.....+..+...++..+.......+..|..
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~ 131 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIA 131 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445667889999999999999999999887777666555544433 3333333334444444455667889999999
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHH
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVA 340 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~ 340 (388)
|++.|+...++......+|..++..+.
T Consensus 132 ~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 132 PPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccccccccccccc
Confidence 999999999988888777777766544
No 208
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.16 E-value=5e-06 Score=79.28 Aligned_cols=89 Identities=18% Similarity=0.161 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHH-HHHHHHHHHHHHHHHHHhcc------cchHHHHHHh
Q 016515 16 YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALS-AFWTAGTIFEASLAWVVMTR------LNWRWLLAFS 87 (388)
Q Consensus 16 ~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~G~~~~~~l~~~~~~~------~~WR~~f~~~ 87 (388)
++.+++.+++.|++.+.. +....++.|++|+++||+..++.+ ..+.+|..+++.++..+.+. +|||..|.+.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 467788999999998865 556678999999999999999997 67889999999998877654 5799999888
Q ss_pred hHHHHHH-HHHHhcCCCC
Q 016515 88 SVPSFAL-LLFYGLAPES 104 (388)
Q Consensus 88 ~i~~l~~-~~~~~~~pES 104 (388)
++..++. ....++++|+
T Consensus 388 ~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 7776655 4455667876
No 209
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.13 E-value=0.00027 Score=65.85 Aligned_cols=99 Identities=17% Similarity=0.220 Sum_probs=77.7
Q ss_pred hhhhcCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc--ccchHHHHH
Q 016515 8 LLSSFSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT--RLNWRWLLA 85 (388)
Q Consensus 8 ~l~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~--~~~WR~~f~ 85 (388)
.+.-+.++...+-+.-+..|++.+...+-++|+--..|+++--++.+........|..+++.++..+.. ..+++.++.
T Consensus 86 ~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~ 165 (412)
T PF01770_consen 86 LLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNY 165 (412)
T ss_pred HHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 344567889999999999999988777777898777888887888888889999999998888887653 567888888
Q ss_pred HhhHHHHHHHHHHhcCCCCch
Q 016515 86 FSSVPSFALLLFYGLAPESPR 106 (388)
Q Consensus 86 ~~~i~~l~~~~~~~~~pESp~ 106 (388)
+......+.+++.+++|-.++
T Consensus 166 isl~~~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 166 ISLASVSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHcCCCCc
Confidence 876655566666677886444
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.09 E-value=0.0025 Score=58.99 Aligned_cols=72 Identities=18% Similarity=0.268 Sum_probs=54.0
Q ss_pred HHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHhhHH
Q 016515 19 LVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN-WRWLLAFSSVP 90 (388)
Q Consensus 19 l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~-WR~~f~~~~i~ 90 (388)
....-.+.|+|.+.. ....+++.|.+|+++|++..++.-.+..+|.++++.+.....+.++ =|....+..++
T Consensus 92 a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 92 AALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 455667788888765 3456788999999999999999999999999999988877665443 34443444433
No 211
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.09 E-value=6.9e-07 Score=87.23 Aligned_cols=59 Identities=14% Similarity=0.207 Sum_probs=2.9
Q ss_pred HHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016515 16 YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 74 (388)
Q Consensus 16 ~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~ 74 (388)
+..++++.++.|+|.... +...+|+=|.++++.-+.+.++......+|..+|-+++...
T Consensus 141 ~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 141 FYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFC 200 (539)
T ss_dssp -----------SSS----------------------------------------------
T ss_pred HHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHH
Confidence 467899999999998875 66789999999999999999999999999998887776653
No 212
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.06 E-value=9.4e-05 Score=70.89 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=76.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHH----hchhHH-HHHHHHHHHHHHHHHhhhch----h--HHHHHHHHHHHHhhhccccee
Q 016515 237 VFIASLAELPGLILSAIIVDK----IGRKLS-MVLMFVSACIFLLPLVFHQS----A--VVTTVLLFGVRMCVTGTITVA 305 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~----~gRr~~-~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~ 305 (388)
..+..+...++..+.|.++|| +|||+. ++.+....++....+....+ . .+.....+....+........
T Consensus 41 ~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (437)
T TIGR00792 41 FLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPY 120 (437)
T ss_pred HHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccH
Confidence 344455667788889999998 677554 44555444444333332111 0 111111111111111111223
Q ss_pred eeeccccc-ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 306 TIYAPEIY-PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS-------CHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 306 ~~~~~El~-p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.++.+|+. |++.|++..++.+..+.+|+.+++.+.+.+... .+....+.+++++.++..+..++..||++
T Consensus 121 ~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 121 WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 46778887 578899999998888888877766554444321 12223455566666666666666667764
No 213
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.02 E-value=5.1e-05 Score=72.52 Aligned_cols=137 Identities=21% Similarity=0.275 Sum_probs=98.5
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
++..++.+...|.++||.|||..+....+.+.+-.+...+.. .+ ... ...........++...++.++....+.|+.
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~-~~~-~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YW-FFL-LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HH-Hhh-hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 455567778889999999999988877666544333333322 22 111 111111222344566788999999999999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccCcchh
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMGRELK 380 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~~l~ 380 (388)
..|+.+..-..+..++|.+...+....+...++.+-.+..+++.+...+.+||+...+.+
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 999999998899999999988877776666677777788888888899889998755443
No 214
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.00 E-value=6e-05 Score=70.94 Aligned_cols=127 Identities=17% Similarity=0.164 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHhhhc--hhHHHHHHHHHHHHhhhcccceeeeecccccccc--hhh
Q 016515 245 LPGLILSAIIVDKI-GRKLSMVLMFVSACIFLLPLVFHQ--SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS--ART 319 (388)
Q Consensus 245 ~~~~~~~~~l~d~~-gRr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~--~R~ 319 (388)
....+++|++.||+ |+|+.++++.++..+--+.+.... ......+.+..+.......=+-...+..|++|++ .|-
T Consensus 75 Y~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 75 YLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC
Confidence 45678899999995 999988887766554333333331 1111111111111111122234556788888643 277
Q ss_pred HHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccc
Q 016515 320 TGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFP 371 (388)
Q Consensus 320 ~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 371 (388)
.+.++.+...++|++++|.+.+++.+..+.+..|.+.++-..++.+..++..
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7888888889999999999999887766655555555555555555555443
No 215
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.97 E-value=9.5e-05 Score=71.80 Aligned_cols=130 Identities=22% Similarity=0.167 Sum_probs=91.8
Q ss_pred hhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHh--hhcccceeeeecccccccchhhH
Q 016515 243 AELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMC--VTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 243 ~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
.....+.+.+.+.||+|.|.+.+.+..++.+.++.-.+..+.+ ...+.+....+ ....+...-.+.. -+..+.|+.
T Consensus 93 ~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~-~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~l 170 (509)
T KOG2504|consen 93 VYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLW-QLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRAL 170 (509)
T ss_pred HHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHH
Confidence 3455667788999999999999998888777666655544433 22333333222 1222222334455 455667999
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
|+|++..-..+|.++-|.+.-++.+..+..++.++++.+.+-+.++...+.|.+
T Consensus 171 A~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~ 224 (509)
T KOG2504|consen 171 ATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLS 224 (509)
T ss_pred HHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999888888888887888888888888887777777776643
No 216
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.83 E-value=0.00055 Score=64.47 Aligned_cols=119 Identities=11% Similarity=0.112 Sum_probs=67.2
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHH-HHHHHHh-hhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLMFVSAC-IFLLPLV-FHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
+..+...++..+.+.++||.|||.........+. ++.+.+. ..++.+...........+.....+....+..| +.+
T Consensus 47 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~ 124 (382)
T TIGR00902 47 AALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT--WQK 124 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH--HHH
Confidence 3455567778889999999998654322221111 1111111 22222222222221222222233444444444 256
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHH
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVV 359 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~ 359 (388)
.|+++.|..+..+.+|..++|.+.+.+.+..+....+.+....
T Consensus 125 ~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 125 QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 7899999999999999999999888887766555555444433
No 217
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.82 E-value=0.00031 Score=61.32 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=64.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhh--hc----hhHHHHHHHHH-HHHhhhcccceeeeec
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVF--HQ----SAVVTTVLLFG-VRMCVTGTITVATIYA 309 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 309 (388)
.....++...| +.+|.+.|+.|.|.+++++.+...+-...+.. .+ ...+.+.+... ...+.....+......
T Consensus 43 ~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~ 121 (250)
T PF06813_consen 43 STAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTC 121 (250)
T ss_pred HHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHH
Confidence 34445555554 78899999999999988887765543333322 11 12222222211 1111111112233445
Q ss_pred ccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 310 PEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 310 ~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
.+.||. .||++.|+.-....+++.+-+.+...+...
T Consensus 122 ~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 122 VRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 689985 799999999999888888776666554443
No 218
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00022 Score=68.72 Aligned_cols=140 Identities=14% Similarity=0.099 Sum_probs=99.3
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
..+..++++++.+.++.+.||+.-.+.+..+.++.+++.+.....++....+.+-+...++=...++..-.++.-.|..+
T Consensus 87 ~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~ 166 (495)
T KOG2533|consen 87 DTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKS 166 (495)
T ss_pred HHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChh
Confidence 34556778999999999999999655555544444444333222333333344445554555566777788999999999
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhc------ccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVT------SCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
.|++-.|+-++.+.+|+++++.++..+.. ..+..+.|++-+++.++.+++++++.|+...
T Consensus 167 e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 167 ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 99999999999999999999988876432 2233456788888888888888888777554
No 219
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.77 E-value=0.00099 Score=62.73 Aligned_cols=135 Identities=11% Similarity=0.080 Sum_probs=72.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHH-HHHHHHHHHHHhh-hchhHHHHHHHHHHHHhhhcccceeeeecccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLM-FVSACIFLLPLVF-HQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP 314 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 314 (388)
..+..+...++.++.+.++||+|||....-. ...+.++.+.... .++.+...+..+....+.....+....+..+.
T Consensus 45 ~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-- 122 (382)
T PRK11128 45 LGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-- 122 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--
Confidence 3344556677888899999999984321110 1111111111122 22222222222222222222333333444443
Q ss_pred cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 315 TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 315 ~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
.+.|+.+.+..+..+.+|..++|.+.+.+.+..+....+++.++..++..+.. +..||.
T Consensus 123 ~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~ 181 (382)
T PRK11128 123 QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPTI 181 (382)
T ss_pred HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCCC
Confidence 34578888888988999999999999888776665555655554444443333 334554
No 220
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.72 E-value=0.00082 Score=63.43 Aligned_cols=70 Identities=16% Similarity=0.044 Sum_probs=48.6
Q ss_pred eeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 305 ATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 305 ~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
.-.+..|..+++.++...+.......+|..+++...+.+.+..+...++++.+++.++..+..++.+||.
T Consensus 118 ~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 118 TDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3446778888888777777776666788888887766666666666677777777766666666655543
No 221
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.68 E-value=0.011 Score=56.11 Aligned_cols=57 Identities=16% Similarity=0.103 Sum_probs=40.6
Q ss_pred ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHH
Q 016515 14 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASL 70 (388)
Q Consensus 14 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l 70 (388)
+|-+.+++.-.+.|+|.+.. ..-..|++|.++++.+.+..++.=.....+.++|+..
T Consensus 100 ~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 100 PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred cchHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHh
Confidence 34566889999999998865 3456799999999998887776544444444555433
No 222
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.67 E-value=0.01 Score=56.99 Aligned_cols=261 Identities=18% Similarity=0.191 Sum_probs=140.3
Q ss_pred HhhccCcc--h-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHHHH-HHHHhc
Q 016515 25 FVGVGLGG--V-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFAL-LLFYGL 100 (388)
Q Consensus 25 l~G~~~g~--~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l~~-~~~~~~ 100 (388)
+.|+..|. . ....+|+++.+..++|....++....+..+..+++.++.......|.-.+|.+..+..++. ...+.+
T Consensus 119 ~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~ 198 (463)
T KOG2816|consen 119 LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLF 198 (463)
T ss_pred hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhc
Confidence 56665443 2 3456899999999999999999999999999999999888777788888888888776665 556778
Q ss_pred CCCCchHHHhccChHHHHHHHHHHHHhcCCCCCCCccccchhhhhhhhchhhhccccccccccccccccccchhhhhhcc
Q 016515 101 APESPRYLCAKARTVDAHRILEKMAFVNQTKLPPGILVSDKAIKENEESNLLRDTHMLSMTRKITDKLKSGFSSFFMLFS 180 (388)
Q Consensus 101 ~pESp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 180 (388)
+|||-+- +.+.+ + . -.+..++. .. . .+ ....++.+.+
T Consensus 199 l~Esl~~---~~~~~-~--~-------~~~~~~~~-~~-----~-~~-----------------------~~~~~~~~~~ 235 (463)
T KOG2816|consen 199 LPESLQE---KERSD-A--T-------LRELTPGS-LD-----S-SH-----------------------VADAFQSLTK 235 (463)
T ss_pred cccccCc---ccccc-c--c-------ccccCCCc-cc-----c-hh-----------------------hhhhhhhhcc
Confidence 9998530 11100 0 0 00000000 00 0 00 0000111111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH-----HHhhhhcCCCCCCCCcccccCCCCCchhHH-HHHHHHhhhhHHHHHHH-H
Q 016515 181 RKLIRTTLLLWVLFFANVFSYYGAV-----LLTSKLSSGDNKCGSKVLHADKSKDNSLYV-DVFIASLAELPGLILSA-I 253 (388)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 253 (388)
.+..|..+.+... ..+.+..-. .....+. .....+...+. .....++...++.++.. .
T Consensus 236 ~~~~r~~l~l~l~---~~~~~~~~~~~~~~~~~~yl~------------~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~ 300 (463)
T KOG2816|consen 236 VGPDRLLLLLLLV---AFLSSLPEAGGASDVLLLYLK------------AKFGWNKKEFSDLLSLVSILGIISQLLLLPL 300 (463)
T ss_pred cCCCccchHHHHH---HHHHHHHHhcCceeEEEEEEe------------eecCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111111 111111000 0000011 00111111111 12233444566666666 6
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHHHHHHhHhH
Q 016515 254 IVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVASSLGKVGG 333 (388)
Q Consensus 254 l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~ 333 (388)
+...+|-|+....++..-.+......+....+.... ............+...++.+-..+++-+|+..++...+..+.+
T Consensus 301 l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~-~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~ 379 (463)
T KOG2816|consen 301 LSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFA-AGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSG 379 (463)
T ss_pred HHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhH-HHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhh
Confidence 777788888777676655555544455444332211 1111122223345566778888899999999999999999999
Q ss_pred hHHHHHHHHhh
Q 016515 334 MVCPLVAVGLV 344 (388)
Q Consensus 334 ~~~p~~~~~~~ 344 (388)
+++|.+...+.
T Consensus 380 ~~~~~~~~~i~ 390 (463)
T KOG2816|consen 380 VVSPALYGNIF 390 (463)
T ss_pred hhhHHHHHHHH
Confidence 99887765543
No 223
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.0028 Score=58.29 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=73.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh--ch-hHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH--QS-AVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
.+....++...++-.+++.+|+|+|+-++.+..+.++...++... .. ........|....+....=+....+.+.+.
T Consensus 54 qfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg 133 (422)
T COG0738 54 QFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLG 133 (422)
T ss_pred HHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC
Confidence 344455678888899999999999999999888776655554421 11 111111122221111111123556888888
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
|++..+.-.++...+..+|+.++|.+...+..
T Consensus 134 ~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 134 KPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred CchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 88888888999999999999999998877665
No 224
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.52 E-value=0.003 Score=62.94 Aligned_cols=87 Identities=10% Similarity=0.122 Sum_probs=67.5
Q ss_pred HHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcc---c---------------
Q 016515 18 SLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTR---L--------------- 78 (388)
Q Consensus 18 ~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~---~--------------- 78 (388)
.++++-++.|+|.... +...+|+=|.+.+++-+.+.++......+|.++|-+++.+.... +
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWI 318 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWI 318 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchh
Confidence 6788999999998764 66778999999999999999999999999999988888775321 1
Q ss_pred -chHHHHHHhhHHHHHHHHHHhcCCCC
Q 016515 79 -NWRWLLAFSSVPSFALLLFYGLAPES 104 (388)
Q Consensus 79 -~WR~~f~~~~i~~l~~~~~~~~~pES 104 (388)
.|..=|++++...++..+..+++|..
T Consensus 319 GAWWlGFLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 319 GAWWLGFLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 37776777777766666666666644
No 225
>PRK11462 putative transporter; Provisional
Probab=97.52 E-value=0.0027 Score=61.45 Aligned_cols=133 Identities=13% Similarity=0.104 Sum_probs=72.9
Q ss_pred HhhhhHHHHHHHHHHHH----hchhHHHH-HHHHHHHHHHHHHhh-hc-h--h--HHHHHHHHHHHHhhhcccce-eeee
Q 016515 241 SLAELPGLILSAIIVDK----IGRKLSMV-LMFVSACIFLLPLVF-HQ-S--A--VVTTVLLFGVRMCVTGTITV-ATIY 308 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~----~gRr~~~~-~~~~~~~~~~~~~~~-~~-~--~--~~~~~~~~~~~~~~~~~~~~-~~~~ 308 (388)
-+...+.-.+.|.++|| +|||+.++ .+....++....+.. +. + . .+..+..+....+. ....+ .+++
T Consensus 55 ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~-t~~~ipy~al 133 (460)
T PRK11462 55 RALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLY-TVVNIPYCAL 133 (460)
T ss_pred HHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH-HHHhccHHHH
Confidence 33445667778999996 58877665 343444443333322 21 1 1 11111111111222 22233 3478
Q ss_pred cccccc-cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-------hhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 309 APEIYP-TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-------LRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 309 ~~El~p-~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
.+|+.+ ++.|++..+.-...+.+|+.+++.+...+....+ ......+++++.+++.++++...+|.
T Consensus 134 ~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 134 GGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence 889876 8999999999999999888887766544433221 11123445555555555555545554
No 226
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.52 E-value=0.0014 Score=63.59 Aligned_cols=125 Identities=14% Similarity=0.149 Sum_probs=68.9
Q ss_pred HHHHHHHHHhc-----hhHHHHHHHHHHH-HHHHHHhhhchh-HHHHHHHHHHHHhhhcccceeeeecccccccchhhHH
Q 016515 249 ILSAIIVDKIG-----RKLSMVLMFVSAC-IFLLPLVFHQSA-VVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTG 321 (388)
Q Consensus 249 ~~~~~l~d~~g-----Rr~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~ 321 (388)
.+.|.++||++ ||+.++.+.+..+ +....+....+. .....+.+...++....-...-.+..|..+ +.++.+
T Consensus 78 ~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~ 156 (468)
T TIGR00788 78 PFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAG 156 (468)
T ss_pred HHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcC
Confidence 34899999996 6666665555442 222222222221 122222233323322222345567888887 444443
Q ss_pred ---HHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 322 ---FGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 322 ---~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.+.......+|..+++.+.+.+.+..+....+++.+++.++..+ ..++.||.+
T Consensus 157 ~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~-~~~~~~E~~ 212 (468)
T TIGR00788 157 PSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF-VSNLSKERR 212 (468)
T ss_pred CCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-HHHhccccc
Confidence 34444444578889998888877765555666666666666633 334456754
No 227
>PRK09669 putative symporter YagG; Provisional
Probab=97.49 E-value=0.00074 Score=65.01 Aligned_cols=137 Identities=13% Similarity=0.130 Sum_probs=71.1
Q ss_pred HHHHhhhhHHHHHHHHHHHH----hchhHHHH-HHHHHHHHHHHHH-hhhc---h--hHHHHHHHHHHHHhhhcccceee
Q 016515 238 FIASLAELPGLILSAIIVDK----IGRKLSMV-LMFVSACIFLLPL-VFHQ---S--AVVTTVLLFGVRMCVTGTITVAT 306 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~----~gRr~~~~-~~~~~~~~~~~~~-~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~ 306 (388)
.+.-+...+...+.|+++|| +|||+.++ .+....++..... ..+. . ..+..+.......+.........
T Consensus 52 ~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~ 131 (444)
T PRK09669 52 LVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYC 131 (444)
T ss_pred HHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHH
Confidence 33444456677788999998 67765554 4444443333222 2221 1 11111111111112222222234
Q ss_pred eeccccc-ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-------hhHHHHHHHHHHHHHHHHhhcccccc
Q 016515 307 IYAPEIY-PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-------LRLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 307 ~~~~El~-p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
++.+|+. +++.|++..+.....+.+|+.+++.+...+....+ ......+++++.+++.+.+++..+|.
T Consensus 132 al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 132 AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence 6788987 56789999899888888888877655443332211 11134445555555555555544453
No 228
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.47 E-value=0.00043 Score=66.30 Aligned_cols=130 Identities=17% Similarity=0.156 Sum_probs=75.1
Q ss_pred hhHHHHHHHHHHH----HhchhHHHH-HHHHHHHHHHHHHhhh-c---hh----HHHHHHHHHHHHhhhcccceeeeecc
Q 016515 244 ELPGLILSAIIVD----KIGRKLSMV-LMFVSACIFLLPLVFH-Q---SA----VVTTVLLFGVRMCVTGTITVATIYAP 310 (388)
Q Consensus 244 ~~~~~~~~~~l~d----~~gRr~~~~-~~~~~~~~~~~~~~~~-~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
..+...+.|.++| |+|||+..+ .+....++....+... . +. .+..+..+....+.........++.+
T Consensus 50 dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~ 129 (428)
T PF13347_consen 50 DAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIP 129 (428)
T ss_pred hhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCc
Confidence 3444447788999 789877654 4555555544444322 1 11 11111111222222222223457899
Q ss_pred cccc-cchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccc-------hhHHHHHHHHHHHHHHHHhhccccc
Q 016515 311 EIYP-TSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCH-------LRLAVILFEVVFVLAIASSLLFPFE 373 (388)
Q Consensus 311 El~p-~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~pe 373 (388)
|+.+ ++.|.+..+.....+.+|+.+.+.+.+.+.+..+ ......+++++.+++.++..+..+|
T Consensus 130 ~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 130 ELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred cccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 9997 5789999999999988888766665555443322 1233455666666777777777777
No 229
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.47 E-value=0.00058 Score=63.64 Aligned_cols=94 Identities=15% Similarity=0.096 Sum_probs=63.3
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhh---chh--HH--HHHHHHHHHHhhhcccceeeee
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFH---QSA--VV--TTVLLFGVRMCVTGTITVATIY 308 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~---~~~--~~--~~~~~~~~~~~~~~~~~~~~~~ 308 (388)
...+..++.+.|.++.|++.||+|||+++...+++..++.+....+ .+. .+ ..++-+...+...+=+|+..++
T Consensus 89 Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI 168 (538)
T KOG0252|consen 89 VNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATI 168 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHH
Confidence 3455677789999999999999999999877766665555433321 111 11 1122233344555667888899
Q ss_pred cccccccchhhHHHHHHHHHH
Q 016515 309 APEIYPTSARTTGFGVASSLG 329 (388)
Q Consensus 309 ~~El~p~~~R~~~~~~~~~~~ 329 (388)
++|---.+-|++-.+..-++.
T Consensus 169 ~SE~an~~~RGa~iaavFa~Q 189 (538)
T KOG0252|consen 169 MSESANKKTRGAFIAAVFAMQ 189 (538)
T ss_pred hhhhhhhccccceeEEEEEec
Confidence 999999999988766654443
No 230
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.41 E-value=0.0032 Score=61.16 Aligned_cols=137 Identities=12% Similarity=0.100 Sum_probs=70.5
Q ss_pred HHHHhhhhHHHHHHHHHHH----HhchhHHH-HHHHHHHHHHHHHHhhhc--hhH----HHHHHHHHHHHhhhcccceee
Q 016515 238 FIASLAELPGLILSAIIVD----KIGRKLSM-VLMFVSACIFLLPLVFHQ--SAV----VTTVLLFGVRMCVTGTITVAT 306 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d----~~gRr~~~-~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~ 306 (388)
.+.-+...+...+.|.++| |+|||+.+ +.+....++....+.... +.. +..+.......+.........
T Consensus 49 ~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~ 128 (473)
T PRK10429 49 LVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFW 128 (473)
T ss_pred HHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHH
Confidence 3344445666777899999 55986544 445555444433332211 111 111111111112222222344
Q ss_pred eeccccc-ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhccc---ch----hHHHHHHHHHHHHHHHHhhcccccc
Q 016515 307 IYAPEIY-PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC---HL----RLAVILFEVVFVLAIASSLLFPFET 374 (388)
Q Consensus 307 ~~~~El~-p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~---~~----~~~~~i~~~~~~~~~~~~~~~~pet 374 (388)
++.+|+. +++.|.+..+.-...+.+++++.+.+...+.+.. +. .....+++++.+++.+..++..||.
T Consensus 129 al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 129 SLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred hhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 6789998 6999999999877777777666654443322211 11 1122344455455555555545664
No 231
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.30 E-value=0.0059 Score=58.23 Aligned_cols=130 Identities=16% Similarity=0.146 Sum_probs=86.2
Q ss_pred HHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccch
Q 016515 238 FIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSA 317 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~ 317 (388)
.+.-.++++..++.+++++|+|+-+++..++.+...=.+...+-++.|..+-+-+.-.......|...-.|++...|++.
T Consensus 413 a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l 492 (618)
T KOG3762|consen 413 ALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL 492 (618)
T ss_pred hhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 44456678889999999999999998887777766645554444555543333233333333455666678999999999
Q ss_pred hhHHHHHHHHHH-hHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHh
Q 016515 318 RTTGFGVASSLG-KVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS 367 (388)
Q Consensus 318 R~~~~~~~~~~~-~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 367 (388)
|+++.++....- .+|=.++.++.+.+....+.-..+.++++.+++..+..
T Consensus 493 ~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 493 RATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALF 543 (618)
T ss_pred hHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHH
Confidence 999999987764 34555566666655555555556666766655444433
No 232
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.29 E-value=0.019 Score=54.43 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=74.3
Q ss_pred hhhhhhhhhcC--ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCc--hhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016515 3 TSVAGLLSSFS--PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH--RGRWMVALSAFWTAGTIFEASLAWVVMTR 77 (388)
Q Consensus 3 ~~i~~~l~~~~--~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~--Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~ 77 (388)
..++-++.+.+ .+...++++=.+.++|.|.. +..++.+.|..|++. |-...+++..+..+|.++++.+.....+.
T Consensus 102 ~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~ 181 (498)
T COG3104 102 MAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN 181 (498)
T ss_pred HHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh
Confidence 35566666666 47888999999999999987 788889999998753 44445667778889999999999998889
Q ss_pred cchHHHHHHhhHHHHHHHH
Q 016515 78 LNWRWLLAFSSVPSFALLL 96 (388)
Q Consensus 78 ~~WR~~f~~~~i~~l~~~~ 96 (388)
.||...|..+++-..+.++
T Consensus 182 ~g~~~gF~~aavGm~~gl~ 200 (498)
T COG3104 182 YGWHVGFGLAAVGMIIGLV 200 (498)
T ss_pred hCHHHHHHHHHHHHHHHHH
Confidence 9999999998876554433
No 233
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.23 E-value=0.0086 Score=57.94 Aligned_cols=138 Identities=20% Similarity=0.253 Sum_probs=81.6
Q ss_pred HHHhhhhHHHHHHHHHHHHhchhHHHHHH-HHHHHHHHHHHhh-hc-hhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 239 IASLAELPGLILSAIIVDKIGRKLSMVLM-FVSACIFLLPLVF-HQ-SAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 239 ~~~~~~~~~~~~~~~l~d~~gRr~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
++.+...+...+.|-++|+-|+|+.++.. ..++.++...+.+ .. ..+...++......+.........++.+|+.++
T Consensus 78 is~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~ 157 (477)
T PF11700_consen 78 ISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARP 157 (477)
T ss_pred HHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCC
Confidence 44555566667788899998877766543 3444444444443 22 232333333333333333333456789999988
Q ss_pred chh--------------------------hHHHHHHHHHHhHhHhHHHHHHHHhhcccc-h-------hHHHHHHHHHHH
Q 016515 316 SAR--------------------------TTGFGVASSLGKVGGMVCPLVAVGLVTSCH-L-------RLAVILFEVVFV 361 (388)
Q Consensus 316 ~~R--------------------------~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~-~-------~~~~~i~~~~~~ 361 (388)
+-+ ++..+...+.|.+|+.+.-.+...+....+ . ...+.+.++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~ 237 (477)
T PF11700_consen 158 EPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWL 237 (477)
T ss_pred ChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHH
Confidence 888 999999999999999887554433322111 1 223444555555
Q ss_pred HHHHHhhcccccccC
Q 016515 362 LAIASSLLFPFETMG 376 (388)
Q Consensus 362 ~~~~~~~~~~pet~~ 376 (388)
+..+-.++..||.++
T Consensus 238 vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 238 VFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHhCCCCCC
Confidence 555666666777754
No 234
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.16 E-value=0.0033 Score=56.56 Aligned_cols=95 Identities=18% Similarity=0.215 Sum_probs=67.8
Q ss_pred cCccHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh--cccchHHHHHHhhH
Q 016515 12 FSPNYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM--TRLNWRWLLAFSSV 89 (388)
Q Consensus 12 ~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~--~~~~WR~~f~~~~i 89 (388)
+.++.+++=+.-+..|...+..-+-++|+-+..+|+++-+..+..-...-.|..++..++..+. +..+++.+-.++-.
T Consensus 91 ~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~ 170 (433)
T KOG3810|consen 91 FGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLA 170 (433)
T ss_pred hcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHH
Confidence 4455555555666666666555555678889999999999999998888888888888887764 35677777776655
Q ss_pred HHHHHHHHHhcCCCCch
Q 016515 90 PSFALLLFYGLAPESPR 106 (388)
Q Consensus 90 ~~l~~~~~~~~~pESp~ 106 (388)
-..+......++|.-||
T Consensus 171 ~~~ia~~~A~fLP~v~r 187 (433)
T KOG3810|consen 171 EVTIAVLLALFLPRVKR 187 (433)
T ss_pred HHHHHHHHHhhCCCCch
Confidence 55555666677776554
No 235
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.03 E-value=0.13 Score=48.11 Aligned_cols=97 Identities=23% Similarity=0.194 Sum_probs=55.7
Q ss_pred hhhhhhhhhcCccHHHHHHHHHHhhccCcc-hhhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-ccch
Q 016515 3 TSVAGLLSSFSPNYVSLVIFRCFVGVGLGG-VPVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT-RLNW 80 (388)
Q Consensus 3 ~~i~~~l~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~-~~~W 80 (388)
+.++-++.+++++.+.=+++-++.+++.|. +.....+. ...|+. ..+....+.+.|.++|+..-..+.+ ..+-
T Consensus 99 ~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~ 173 (402)
T PF02487_consen 99 SAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-HFYGKS----SLSAWSSGTGGAGLVGALYYLGLTTLGLSP 173 (402)
T ss_pred HHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH-HhcCcc----ccccccCCcChhhHHHHHHHHHHHHhCcCH
Confidence 456677778899999888999999998874 44433443 344542 2344555555556666654433322 2333
Q ss_pred HHHHHHhh-HHHHHHHHHHhcCCCC
Q 016515 81 RWLLAFSS-VPSFALLLFYGLAPES 104 (388)
Q Consensus 81 R~~f~~~~-i~~l~~~~~~~~~pES 104 (388)
|..+.+.. +|.+..+..++.+|.+
T Consensus 174 ~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 174 RTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 66555544 4444444444455543
No 236
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.88 E-value=0.025 Score=51.73 Aligned_cols=132 Identities=20% Similarity=0.206 Sum_probs=76.2
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccchhhH
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTT 320 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~ 320 (388)
..+..+++...+.+.|++|||+..........+....-....+.....++.....+.+ +..+..-++-.|..|...|.+
T Consensus 123 ~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~-gg~pv~~~~yle~lp~~~r~~ 201 (528)
T KOG0253|consen 123 FLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGV-GGLPVDSAIYLEFLPSSHRWL 201 (528)
T ss_pred HhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccC-CCccHhHHHHHHhccCcCCCc
Confidence 3455777888899999999999877666655444433222222222233333443433 335666677899999999998
Q ss_pred HHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 321 GFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 321 ~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
-+=+. +.-.+|.+..-.+.-..+...+..+-.+..+....+.++ ..+..||..
T Consensus 202 ~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~-f~~w~~ESp 254 (528)
T KOG0253|consen 202 LTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAAR-FLVWVYESP 254 (528)
T ss_pred chhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHH-HHhhcccCc
Confidence 87777 666677777665554434444322222222333333333 333457754
No 237
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.82 E-value=0.011 Score=55.61 Aligned_cols=130 Identities=18% Similarity=0.177 Sum_probs=61.6
Q ss_pred HHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHh---h-h--chhHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 240 ASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLV---F-H--QSAVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 240 ~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~---~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
..+..+....+.|.+.||+|.|+-++....+..+...++. + + +.+.+ .....+..+......+... ..|-+
T Consensus 52 ~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~-lg~iig~i~l~~~f~~~~~--~~Ea~ 128 (412)
T PF01306_consen 52 GSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFW-LGAIIGGIYLGLVFNAGVP--LSEAY 128 (412)
T ss_dssp HHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-H-HHHHHTTTTTTTTTTTHHH--HHHHH
T ss_pred HHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcccch--HHHHH
Confidence 3445566677889999999977655544333222211111 1 1 11111 1111111111111111111 12333
Q ss_pred cc---chhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhccccc
Q 016515 314 PT---SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFE 373 (388)
Q Consensus 314 p~---~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pe 373 (388)
-. +..+.-.|=.+..|.+|-.++..+.+.+.+. +++..+++..+..++..++.++..|+
T Consensus 129 ~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 129 AERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp HHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred HHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 11 1223336666777888888888888887753 44555665555555555555555444
No 238
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.74 E-value=0.05 Score=54.74 Aligned_cols=100 Identities=13% Similarity=0.162 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHhhh---c--hhHH---HHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 245 LPGLILSAIIVDK-IGRKLSMVLMFVSACIFLLPLVFH---Q--SAVV---TTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 245 ~~~~~~~~~l~d~-~gRr~~~~~~~~~~~~~~~~~~~~---~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
.+..+++|++.|+ +||++.++.+.++..+....+... . +... ....+..+..+..+.-+.......|.++.
T Consensus 37 yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 37 YLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 4556778999997 699998877666544332222221 1 0111 11111111122222224455667777764
Q ss_pred c---hhhHHHHHHHHHHhHhHhHHHHHHHHhh
Q 016515 316 S---ARTTGFGVASSLGKVGGMVCPLVAVGLV 344 (388)
Q Consensus 316 ~---~R~~~~~~~~~~~~i~~~~~p~~~~~~~ 344 (388)
+ .|.....+.+..+++|+++++.+.+++.
T Consensus 117 ~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 117 RQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 4778899999999999999988888765
No 239
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.71 E-value=0.18 Score=48.60 Aligned_cols=41 Identities=7% Similarity=-0.085 Sum_probs=37.3
Q ss_pred eeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhh
Q 016515 304 VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV 344 (388)
Q Consensus 304 ~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~ 344 (388)
+.|.+++|+++++.-.+-.++....+++|..+++.+..++.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999998776654
No 240
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.68 E-value=0.039 Score=51.76 Aligned_cols=110 Identities=18% Similarity=0.109 Sum_probs=66.7
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH-Hhhhch---hHHHHHHHHHHHHhh--h--cccceeeee
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLP-LVFHQS---AVVTTVLLFGVRMCV--T--GTITVATIY 308 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~--~--~~~~~~~~~ 308 (388)
..+..+.+++-.+.+.|+.||+|-|...+++.....+-... .....+ ....--+...+.... . ....++.-+
T Consensus 85 smIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPski 164 (480)
T KOG2563|consen 85 SMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKI 164 (480)
T ss_pred HHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHH
Confidence 44556777888899999999999999888877655442221 111111 111101111111111 1 112334456
Q ss_pred cccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcc
Q 016515 309 APEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTS 346 (388)
Q Consensus 309 ~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~ 346 (388)
..-.||++.|++|..++...+.+|..++..+.+.+...
T Consensus 165 A~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 165 AAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred HHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 66779999999999999998888887776555444433
No 241
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.50 E-value=0.27 Score=44.99 Aligned_cols=133 Identities=14% Similarity=0.006 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccce--eee---ecccccccchh
Q 016515 244 ELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITV--ATI---YAPEIYPTSAR 318 (388)
Q Consensus 244 ~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~El~p~~~R 318 (388)
..+...+.|.+.||+|||+.-+...+.-++..+.....+-. ...+--+.........++. .|. .-..-+|.+-.
T Consensus 82 s~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~-~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 82 SAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYP-VLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 34455667889999999998776665555544433222211 1111111111111111121 111 12234566655
Q ss_pred hHHHHHHHHH-HhHhHhHHHHHHHHhhcc--cchhHHHHHHHHHHHHHHHHhhcccccccCc
Q 016515 319 TTGFGVASSL-GKVGGMVCPLVAVGLVTS--CHLRLAVILFEVVFVLAIASSLLFPFETMGR 377 (388)
Q Consensus 319 ~~~~~~~~~~-~~i~~~~~p~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~pet~~~ 377 (388)
+...+..... +.+.++.+-.+...+.+. .+.-.|+..-..+.+++.+++...-+|+.+.
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 5555544422 222333333333333332 2335577666667777777777666787654
No 242
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.35 E-value=0.03 Score=49.88 Aligned_cols=88 Identities=26% Similarity=0.419 Sum_probs=65.0
Q ss_pred hhhhhhcCcc--HHHHHHHHHHhhccCcch-hhHHHHHHhhccc-CchhhHHHHHHH-HHHHHHHHHHHHHHHHh--ccc
Q 016515 6 AGLLSSFSPN--YVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPV-SHRGRWMVALSA-FWTAGTIFEASLAWVVM--TRL 78 (388)
Q Consensus 6 ~~~l~~~~~~--~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~-~~Rg~~~~~~~~-~~~~G~~~~~~l~~~~~--~~~ 78 (388)
+.++.++.++ ...+++.|+++|++.|.. +....++.|+.|+ ++|+...+.... ....|.++++.++.... ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T COG0477 82 GTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLW 161 (338)
T ss_pred HHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456666665 899999999999998865 6777899999998 778888887777 57778787775554433 246
Q ss_pred chHHHHHHhhHHHHH
Q 016515 79 NWRWLLAFSSVPSFA 93 (388)
Q Consensus 79 ~WR~~f~~~~i~~l~ 93 (388)
+||..|....+....
T Consensus 162 ~~~~~~~~~~~~~~~ 176 (338)
T COG0477 162 GWRAAFLLAALLGLL 176 (338)
T ss_pred chHHHHHHHHHHHHH
Confidence 899976666555433
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.31 E-value=0.019 Score=55.04 Aligned_cols=128 Identities=22% Similarity=0.221 Sum_probs=74.8
Q ss_pred HHHHHHHHHHh---c--hhHHHHHHHHHHHHHHHHHhh-hc---hhHHHHHHHHHHHHhhhcccceeeeeccccc---cc
Q 016515 248 LILSAIIVDKI---G--RKLSMVLMFVSACIFLLPLVF-HQ---SAVVTTVLLFGVRMCVTGTITVATIYAPEIY---PT 315 (388)
Q Consensus 248 ~~~~~~l~d~~---g--Rr~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~---p~ 315 (388)
-.+.|.++|.+ | ||+-++++..++.+..+.+.. .. +......+++...++....-.+.-.+.+|.. |.
T Consensus 41 Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~ 120 (433)
T PF03092_consen 41 KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE 120 (433)
T ss_pred hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc
Confidence 34678889986 3 444445555555443333332 11 1122222233332322222223444556664 55
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhcccccccC
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLLFPFETMG 376 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~pet~~ 376 (388)
+ |+.-.+.+..+..+|++++..+.+.+.+..+....+.+.+++.++..+..+++.+|.+.
T Consensus 121 ~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~ 180 (433)
T PF03092_consen 121 S-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKV 180 (433)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccc
Confidence 5 88888888888889999998888887776655555666676766666667777777433
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.26 E-value=1.1 Score=42.68 Aligned_cols=101 Identities=19% Similarity=0.156 Sum_probs=63.8
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHH----HHhhhch---hHHHHHHHHHHHHhhhcccc---eee
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLL----PLVFHQS---AVVTTVLLFGVRMCVTGTIT---VAT 306 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~ 306 (388)
-.+..+.++.|+++..++.+|+|..+.-+++......++. .+....+ ......++.+...+=.|.++ ...
T Consensus 299 R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~ 378 (432)
T PF06963_consen 299 RGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVT 378 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4455667788999999999999988876666554333222 2222221 22222222222222223333 345
Q ss_pred eecccccccchhhHHHHHHHHHHhHhHhHHH
Q 016515 307 IYAPEIYPTSARTTGFGVASSLGKVGGMVCP 337 (388)
Q Consensus 307 ~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p 337 (388)
.+.-|..|.+.|++-.|+-++..++...+.-
T Consensus 379 qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 379 QIMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred HhhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999988887653
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.16 E-value=0.094 Score=50.06 Aligned_cols=131 Identities=15% Similarity=0.103 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHHH----hchhHHHH-HHHHHHHHHHHHHhhhc------hhHHHHHHHHHHHHhhhcccceeeeeccccc
Q 016515 245 LPGLILSAIIVDK----IGRKLSMV-LMFVSACIFLLPLVFHQ------SAVVTTVLLFGVRMCVTGTITVATIYAPEIY 313 (388)
Q Consensus 245 ~~~~~~~~~l~d~----~gRr~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~ 313 (388)
.+.-.+.|.++|| +||||.++ .+.+..++...++.... +..+..+..+....+.....-...++.+|+-
T Consensus 62 Ai~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT 141 (467)
T COG2211 62 AITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEIT 141 (467)
T ss_pred HHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhc
Confidence 3344566778886 57766554 44454444444433321 2223333333333343333233457888886
Q ss_pred -ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccch-------hHHHHHHHHHHHHHHHHhhccccccc
Q 016515 314 -PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHL-------RLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 314 -p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
.++.|.+..+.-..++.+|+++...+.+++....+. .....+++++..++.+++++-.+|..
T Consensus 142 ~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 142 QDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 577899999999999999888776666555443221 12345555666666666666655543
No 246
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.10 E-value=0.22 Score=47.19 Aligned_cols=98 Identities=20% Similarity=0.266 Sum_probs=49.0
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhch-hHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGR-KLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gR-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
..+..+..+++..+.|.+.||.++ |+.+.+..+++++.+.......+.+....+.....++.....++.-+++-+...
T Consensus 43 ~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~- 121 (400)
T PF03825_consen 43 LAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG- 121 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc-
Confidence 344566678889999999999864 555555555555544444333333322222222222222223333334333332
Q ss_pred chhhHHHHHHHHHHhHhHhHH
Q 016515 316 SARTTGFGVASSLGKVGGMVC 336 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~ 336 (388)
.++.-.|-.+..|.+|=.++
T Consensus 122 -~~~~~YG~iRlwGSiGf~~~ 141 (400)
T PF03825_consen 122 -DRGKDYGRIRLWGSIGFIVA 141 (400)
T ss_pred -cccCCCCcchhhhhHHHHHH
Confidence 23444555555555554444
No 247
>PRK09848 glucuronide transporter; Provisional
Probab=95.75 E-value=0.3 Score=47.01 Aligned_cols=29 Identities=10% Similarity=0.306 Sum_probs=21.5
Q ss_pred HHHHHhhhhHHHHHHHHHHHHh----chhHHHH
Q 016515 237 VFIASLAELPGLILSAIIVDKI----GRKLSMV 265 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~----gRr~~~~ 265 (388)
..+..+...++..+.|+++||. |||+.++
T Consensus 50 ~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~ 82 (448)
T PRK09848 50 LLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFL 82 (448)
T ss_pred HHHHHHHHHHhhhhheeeeecCCCCCcCchHHH
Confidence 4455566778889999999996 7777553
No 248
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.71 E-value=0.24 Score=39.96 Aligned_cols=104 Identities=14% Similarity=0.078 Sum_probs=66.2
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeeccccccc
Q 016515 236 DVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPT 315 (388)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~ 315 (388)
...+......++++++..+++++|.|+.++++.++-.+......+.+.. ..........+.....+.....+..|..+.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~-~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSY-TLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3444455567788889999999999999998887766655554443322 212222222233333445555678888888
Q ss_pred chhhHHHHHHHHHHhHhHhHHHHHH
Q 016515 316 SARTTGFGVASSLGKVGGMVCPLVA 340 (388)
Q Consensus 316 ~~R~~~~~~~~~~~~i~~~~~p~~~ 340 (388)
+.|++-.++.-.+...+.+++..+.
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 8888888887777666555555443
No 249
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.54 E-value=0.083 Score=46.26 Aligned_cols=88 Identities=14% Similarity=0.099 Sum_probs=63.1
Q ss_pred ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHH
Q 016515 14 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSF 92 (388)
Q Consensus 14 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l 92 (388)
++++.+.+.-++.|.+.+.. .+......+.+|. +||.+.++.....+++..+-..+...+.+...-+.++.....|.+
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~ 172 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAV 172 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 46788888888888876543 3333444578885 799999999999999988777776666666667777777777777
Q ss_pred HHHHHHhcCC
Q 016515 93 ALLLFYGLAP 102 (388)
Q Consensus 93 ~~~~~~~~~p 102 (388)
+.++..+++.
T Consensus 173 v~l~~~~~vr 182 (250)
T PF06813_consen 173 VCLVAMFFVR 182 (250)
T ss_pred HHHHHhhhee
Confidence 6555544443
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.03 E-value=0.037 Score=53.04 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=73.7
Q ss_pred hcCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHH-HHHHHHHHHHHHHHHHHhcccchHHHHHHhh
Q 016515 11 SFSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALS-AFWTAGTIFEASLAWVVMTRLNWRWLLAFSS 88 (388)
Q Consensus 11 ~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~-~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~ 88 (388)
...+|.|+.+..-++||+..+.. ..+.+|++...||+.|..++++.+ ...++|--+|++++....+.++=|..|.+.+
T Consensus 454 S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~g 533 (618)
T KOG3762|consen 454 SYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFG 533 (618)
T ss_pred HHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHH
Confidence 45678899999999999999876 566789999999999999988764 6778888889999988888899999998888
Q ss_pred HHHHHHHHHH
Q 016515 89 VPSFALLLFY 98 (388)
Q Consensus 89 i~~l~~~~~~ 98 (388)
+..++.+.+.
T Consensus 534 iAcl~~l~~~ 543 (618)
T KOG3762|consen 534 IACLVTLALF 543 (618)
T ss_pred HHHHHHHHHH
Confidence 8777665443
No 251
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.98 E-value=0.67 Score=40.47 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=36.3
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHH-----hcccchHHHHHHhhHHHHHHHHHHh
Q 016515 46 VSHRGRWMVALSAFWTAGTIFEASLAWVV-----MTRLNWRWLLAFSSVPSFALLLFYG 99 (388)
Q Consensus 46 ~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~-----~~~~~WR~~f~~~~i~~l~~~~~~~ 99 (388)
+|+|+..+.+...++.+|.++......+. ....+|++++.+.++..++.++...
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ 59 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYI 59 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36778888888888999988765443322 1134699999888776655555443
No 252
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.73 E-value=0.089 Score=49.32 Aligned_cols=82 Identities=15% Similarity=0.247 Sum_probs=62.8
Q ss_pred HHHHHHHHHhhccCcch-hhHHHHHHhhcccCc---hhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHH
Q 016515 17 VSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH---RGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSF 92 (388)
Q Consensus 17 ~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l 92 (388)
..++++=++.++|.|+. |...++.+|..+++. |...-..+..+..+|..++..+..++.++.+|.+-|.+.++..+
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 57899999999999987 888899999988763 44445566777888888877766666778999999999887766
Q ss_pred HHHHHH
Q 016515 93 ALLLFY 98 (388)
Q Consensus 93 ~~~~~~ 98 (388)
+.++..
T Consensus 114 ~~~~~f 119 (372)
T PF00854_consen 114 LALIVF 119 (372)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 654443
No 253
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.71 E-value=0.43 Score=42.25 Aligned_cols=105 Identities=21% Similarity=0.274 Sum_probs=59.6
Q ss_pred HhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch--hHHHHHHHHHHHHhhhcccceeeeeccccccc-ch
Q 016515 241 SLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS--AVVTTVLLFGVRMCVTGTITVATIYAPEIYPT-SA 317 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~-~~ 317 (388)
.+....+.+..|.+.||.|||+.++.+........+....... ........+...+......+....+.+|.+|. +.
T Consensus 49 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 128 (338)
T COG0477 49 FLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE 128 (338)
T ss_pred HHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH
Confidence 3444556688999999999997776665431221111122111 11111222211222223345567788999988 67
Q ss_pred hhHHHHHHHH-HHhHhHhHHHHHHHHhhc
Q 016515 318 RTTGFGVASS-LGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 318 R~~~~~~~~~-~~~i~~~~~p~~~~~~~~ 345 (388)
|+...+.... ...++..++|.+.+.+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 129 RGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877 466677777755554433
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=94.18 E-value=0.29 Score=45.65 Aligned_cols=48 Identities=17% Similarity=0.130 Sum_probs=40.4
Q ss_pred ceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchh
Q 016515 303 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLR 350 (388)
Q Consensus 303 ~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~ 350 (388)
+......+|..|++.|+++.++....--+|.+++..+.+.+.++++..
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~ 155 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPE 155 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 345578999999999999999999998888888888888888776543
No 255
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=93.77 E-value=0.25 Score=45.08 Aligned_cols=43 Identities=21% Similarity=0.393 Sum_probs=37.3
Q ss_pred ceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 303 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 303 ~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
+....+.+++.|++.+++..++...+..+|++++|.+...+..
T Consensus 29 ~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~ 71 (310)
T TIGR01272 29 VAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLIL 71 (310)
T ss_pred hhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3456688889999999999999999999999999999887663
No 256
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.38 E-value=0.92 Score=43.65 Aligned_cols=135 Identities=19% Similarity=0.184 Sum_probs=71.5
Q ss_pred HHHHhhhhHHHHHHHHHHHHhc--hhHHHHHHHHHHH-HHHHH--Hhh-hc-hhHHHHHHHHHHHHhhhcccceeeeecc
Q 016515 238 FIASLAELPGLILSAIIVDKIG--RKLSMVLMFVSAC-IFLLP--LVF-HQ-SAVVTTVLLFGVRMCVTGTITVATIYAP 310 (388)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~d~~g--Rr~~~~~~~~~~~-~~~~~--~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (388)
....++..++++..++-..|.+ ||+++. +.+++. ..++. +.+ .+ ..++.++..+...++ .+..+..=.|.+
T Consensus 78 aa~slg~~i~~liF~~Ws~k~~~~k~Pli~-s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg-~~n~a~lR~Y~a 155 (488)
T KOG2325|consen 78 AASSLGHAIFSLIFGIWSNKTGSVKKPLIV-SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVG-VGNFAVLRAYIA 155 (488)
T ss_pred HHHHHHHHhcchhhcccccccCCcccCHHH-HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcC-cccHHHHHHHHH
Confidence 3355666777888888888887 555554 444333 33333 222 22 112222222222111 122233446777
Q ss_pred cccccchhhHHHHHHHHHHhHhHhHHH----HHHHHhhcc---------cc-hhHHHHHHHHHHHHHHHHhhccccccc
Q 016515 311 EIYPTSARTTGFGVASSLGKVGGMVCP----LVAVGLVTS---------CH-LRLAVILFEVVFVLAIASSLLFPFETM 375 (388)
Q Consensus 311 El~p~~~R~~~~~~~~~~~~i~~~~~p----~~~~~~~~~---------~~-~~~~~~i~~~~~~~~~~~~~~~~pet~ 375 (388)
...-.+.|.++.+......-+|..++| .+.+. .+. .+ ...+.++.+++.++..++..++..|-.
T Consensus 156 ~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L-g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 156 DASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL-GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred hccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh-cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 766667777777777664344444444 33321 111 01 124667788888888888888777743
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.25 E-value=11 Score=36.15 Aligned_cols=37 Identities=14% Similarity=0.111 Sum_probs=26.5
Q ss_pred ceeeeecccccccchhhHHHHHHHHHHhHhHhHHHHH
Q 016515 303 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLV 339 (388)
Q Consensus 303 ~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~ 339 (388)
+....+.++..+++.|-.+..+...+-.+|-.++..+
T Consensus 391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888999999888887777666655555543
No 258
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.50 E-value=0.99 Score=36.43 Aligned_cols=63 Identities=19% Similarity=0.286 Sum_probs=50.6
Q ss_pred cCccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016515 12 FSPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 74 (388)
Q Consensus 12 ~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~ 74 (388)
+-|+.+.++.+-.+.|++.+.. .+...|+.|..+++.|++..+++-.....+.++|..+.+..
T Consensus 85 ~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 85 FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888999999999999875 45567999999999999988887777777777776665543
No 259
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=89.78 E-value=10 Score=35.07 Aligned_cols=127 Identities=13% Similarity=0.048 Sum_probs=70.2
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccccc
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYPTS 316 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~ 316 (388)
+.++.++.-..+.+...+..|+|.++.+..+++...+-.+.=... ..............+......+.+...-|-||.+
T Consensus 53 TtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~ 131 (395)
T COG2807 53 TTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR 131 (395)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc
Confidence 344444445556777888889998887776655433322110111 1111111111111222222234567788889887
Q ss_pred hhhHHHHHHHHHHhHhHhHHHHHHHHhhccc-chhHHHHHHHHHHHHHHH
Q 016515 317 ARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-HLRLAVILFEVVFVLAIA 365 (388)
Q Consensus 317 ~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~-~~~~~~~i~~~~~~~~~~ 365 (388)
. +..+|+....-.+++.+++.+..++.+.. +..+...+++..++++.+
T Consensus 132 ~-~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~ 180 (395)
T COG2807 132 V-GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALL 180 (395)
T ss_pred h-hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 4 56677777777777777777776665554 344555666666666644
No 260
>PF12832 MFS_1_like: MFS_1 like family
Probab=89.48 E-value=5.5 Score=27.74 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=25.3
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHH
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFV 269 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~ 269 (388)
..+..+..+++..+.|.++||.+|++..+....
T Consensus 41 ~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 41 SAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 344455678899999999999999887765443
No 261
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.46 E-value=22 Score=34.69 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=36.0
Q ss_pred eeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 304 VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 304 ~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
+.|.+++|.++.+...+-.++....+++|.+++..+..++..
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999988766655444
No 262
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=88.55 E-value=2.5 Score=39.73 Aligned_cols=91 Identities=20% Similarity=0.165 Sum_probs=65.8
Q ss_pred CccHHHHHHHHHHhhccCcchhh-HHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHhhHH
Q 016515 13 SPNYVSLVIFRCFVGVGLGGVPV-FLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT-RLNWRWLLAFSSVP 90 (388)
Q Consensus 13 ~~~~~~l~~~R~l~G~~~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~-~~~WR~~f~~~~i~ 90 (388)
...-..+.++=.+.|++.|+..+ .=+|..+.+|+++-|+..+++...--.+..++|.+...+.+ ..+=|.-+....+.
T Consensus 338 ~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vl 417 (438)
T COG2270 338 LEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVL 417 (438)
T ss_pred ccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHH
Confidence 33334466677889999998754 44799999999999999999999999899999888666543 33466655554544
Q ss_pred HHHHHHHHhcCCC
Q 016515 91 SFALLLFYGLAPE 103 (388)
Q Consensus 91 ~l~~~~~~~~~pE 103 (388)
..+.++....+|+
T Consensus 418 l~iGl~~L~~v~~ 430 (438)
T COG2270 418 LLIGLLLLLRVKV 430 (438)
T ss_pred HHhhHhhEEeecC
Confidence 4455666666665
No 263
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=87.84 E-value=14 Score=34.97 Aligned_cols=122 Identities=17% Similarity=0.202 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHH--HHHHHHHhhhcccceeeeecccccccchhhHHHHHH
Q 016515 248 LILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTV--LLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVA 325 (388)
Q Consensus 248 ~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~ 325 (388)
-+....+.|.+|-|++++...+...+....+.+..+.....+ +.++.... .-...+.|.--..|++.=-++++.+
T Consensus 58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a---~evay~sYiys~v~~~~yq~vts~~ 134 (412)
T PF01770_consen 58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATA---AEVAYYSYIYSVVDKEHYQKVTSYT 134 (412)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHH---HHHHHHHHheeecCHHHHHHHHHHH
Confidence 345667889999999999887776666655555433221111 11111111 1112233443444666667778888
Q ss_pred HHHHhHhHhHHHHHHHHhhcccchhHHH--HHHHHHHHHHHHHhhcccc
Q 016515 326 SSLGKVGGMVCPLVAVGLVTSCHLRLAV--ILFEVVFVLAIASSLLFPF 372 (388)
Q Consensus 326 ~~~~~i~~~~~p~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~p 372 (388)
++..-+|.+++..+.-.+....+.+... .+-.+...++.++.+++|+
T Consensus 135 raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 135 RAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7776665555554433333322222222 2222333455555555543
No 264
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.73 E-value=24 Score=34.01 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=69.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHhhhcccceeeeecccccc
Q 016515 235 VDVFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQSAVVTTVLLFGVRMCVTGTITVATIYAPEIYP 314 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p 314 (388)
....+.+....+++++++-++|+.|.|..++++...-...-..+.+.+.. ...+.....+++....+.....|.+|..+
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y-~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSY-YLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchH-HHHHHHHHhhhhHHheecccceehhhcCC
Confidence 33444555667888999999999999999998877766666555555532 22222222222323335556679999999
Q ss_pred cchhhHHHHHHHHHHhHhHhHHH
Q 016515 315 TSARTTGFGVASSLGKVGGMVCP 337 (388)
Q Consensus 315 ~~~R~~~~~~~~~~~~i~~~~~p 337 (388)
.+-+.+-.++.-+++..+-+++.
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhh
Confidence 99999999998888776665554
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=86.26 E-value=1.6 Score=41.13 Aligned_cols=63 Identities=21% Similarity=0.184 Sum_probs=53.6
Q ss_pred cCccHHHHHHHHHHhhccCcchhh-HHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016515 12 FSPNYVSLVIFRCFVGVGLGGVPV-FLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 74 (388)
Q Consensus 12 ~~~~~~~l~~~R~l~G~~~g~~~~-~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~ 74 (388)
+.|+.+..++.-+..|+-.|...+ ....+.|-.|+++|-..++....+.+.|.+++..++..+
T Consensus 331 fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 331 FIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 468889999999999998777654 456678889999999999999999999999998887664
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=85.25 E-value=46 Score=33.87 Aligned_cols=78 Identities=13% Similarity=0.218 Sum_probs=52.0
Q ss_pred HHHHHHHhhccCcch-hhHHHHHHhhcccCc---hhhHHHHHHHHHHHHHHHHHHHHHHHhc-------ccchHHHHHHh
Q 016515 19 LVIFRCFVGVGLGGV-PVFLAYFLEFVPVSH---RGRWMVALSAFWTAGTIFEASLAWVVMT-------RLNWRWLLAFS 87 (388)
Q Consensus 19 l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~---Rg~~~~~~~~~~~~G~~~~~~l~~~~~~-------~~~WR~~f~~~ 87 (388)
++++=.+..+|.|+. |...+...|..++++ |...-.++..+..+|.+++..+...+.. ..+|...|.+.
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 556666677788876 777788888876543 4444555566667777777666555432 24699999988
Q ss_pred hHHHHHHHH
Q 016515 88 SVPSFALLL 96 (388)
Q Consensus 88 ~i~~l~~~~ 96 (388)
++..++.++
T Consensus 168 ~i~m~ia~l 176 (654)
T TIGR00926 168 AILMILALI 176 (654)
T ss_pred HHHHHHHHH
Confidence 777665433
No 267
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=84.24 E-value=12 Score=36.33 Aligned_cols=28 Identities=25% Similarity=0.462 Sum_probs=17.0
Q ss_pred HHHHHHHhchhHHHHH-HHHHHHHHHHHH
Q 016515 251 SAIIVDKIGRKLSMVL-MFVSACIFLLPL 278 (388)
Q Consensus 251 ~~~l~d~~gRr~~~~~-~~~~~~~~~~~~ 278 (388)
=...+.|+|||+.+++ ...++++.++.+
T Consensus 60 Ds~y~~~~GRRKSWiiP~Q~l~g~~m~~l 88 (544)
T PF13000_consen 60 DSVYSKRIGRRKSWIIPIQYLSGILMLYL 88 (544)
T ss_pred hhhcccccCCcchhhhHHHHHHHHHHHHH
Confidence 3445678999998765 334444444443
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=82.74 E-value=49 Score=32.22 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=31.9
Q ss_pred eeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhhc
Q 016515 304 VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLVT 345 (388)
Q Consensus 304 ~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~ 345 (388)
...++-+.+.+|.+-||-+.+-|.++++||-.-..+...+.|
T Consensus 425 ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 425 AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 344566788899999999999999999998765545444443
No 269
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=81.10 E-value=0.36 Score=43.99 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=2.3
Q ss_pred ceeeeecccccccchhhHHHHHHHHHHhHhHhHHH
Q 016515 303 TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVCP 337 (388)
Q Consensus 303 ~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p 337 (388)
+....+.++..+++.|-.+..+...+-.+|-.++.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp HHHH-------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667888888888888777666665544444444
No 270
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=80.09 E-value=18 Score=33.90 Aligned_cols=30 Identities=40% Similarity=0.468 Sum_probs=19.2
Q ss_pred HHHHHHH-----HhchhHHHHH-HHHHHHHHHHHHh
Q 016515 250 LSAIIVD-----KIGRKLSMVL-MFVSACIFLLPLV 279 (388)
Q Consensus 250 ~~~~l~d-----~~gRr~~~~~-~~~~~~~~~~~~~ 279 (388)
+...++| |+|||+.+++ +..+.+.+++.+.
T Consensus 82 lWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs 117 (510)
T KOG3574|consen 82 LWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLS 117 (510)
T ss_pred HHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHh
Confidence 4556777 9999997754 4445555555544
No 271
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=77.35 E-value=34 Score=32.78 Aligned_cols=54 Identities=13% Similarity=0.043 Sum_probs=36.6
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHh
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASS 367 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 367 (388)
++...+..++...-+-.+..+++|.+.+.+....+......+.++..+++...=
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vE 196 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVE 196 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHH
Confidence 455566777777777778999999999987765554444555555555554443
No 272
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=76.74 E-value=14 Score=34.51 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=45.6
Q ss_pred ceeeeecccccccc---hhhHHHHHHHHHHhHhHhHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHhhc
Q 016515 303 TVATIYAPEIYPTS---ARTTGFGVASSLGKVGGMVCPLVAVGLVTSCHLRLAVILFEVVFVLAIASSLL 369 (388)
Q Consensus 303 ~~~~~~~~El~p~~---~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 369 (388)
+....+.+|-|+.+ .|..+....+...++|+.+++.+.+++-+..+....|.+-++..+++.+..+.
T Consensus 52 ~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 52 PNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 34455667777654 56777888888899999999888887776666566666666666666544443
No 273
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=75.40 E-value=60 Score=28.99 Aligned_cols=65 Identities=18% Similarity=0.123 Sum_probs=39.3
Q ss_pred hhhcCccHHHHHHHHHHhhccCcchhhH-HH-HHHhhcccCc--hhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 9 LSSFSPNYVSLVIFRCFVGVGLGGVPVF-LA-YFLEFVPVSH--RGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 9 l~~~~~~~~~l~~~R~l~G~~~g~~~~~-~~-~~~E~~p~~~--Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
++-.+|.|-.|+++|.+.|++..-...+ -+ ++.|+..++. ..+....+.-...+|.-+.+.+++.
T Consensus 117 iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGl 185 (454)
T KOG4332|consen 117 ITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGL 185 (454)
T ss_pred HhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHH
Confidence 3446788889999999999987654333 23 5688774331 2344444444444555444455444
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=74.22 E-value=14 Score=26.27 Aligned_cols=47 Identities=11% Similarity=0.077 Sum_probs=34.3
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHhhhch
Q 016515 237 VFIASLAELPGLILSAIIVDKIGRKLSMVLMFVSACIFLLPLVFHQS 283 (388)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~~~~~~~~~~ 283 (388)
.....+++++|.+...++.++..+|+.+..+.+.+.+....+....+
T Consensus 33 asaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 33 ASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34456778888888888888877778788887777777666655433
No 275
>PRK03612 spermidine synthase; Provisional
Probab=71.06 E-value=1.1e+02 Score=30.18 Aligned_cols=43 Identities=14% Similarity=0.026 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHhHhHhHHHHHHHHhhc-ccchhHHHHHHHHHHH
Q 016515 319 TTGFGVASSLGKVGGMVCPLVAVGLVT-SCHLRLAVILFEVVFV 361 (388)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~p~~~~~~~~-~~~~~~~~~i~~~~~~ 361 (388)
+...|-.++++.+|+.+++.+.+.++- ..+.....++.+.+.+
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~ 187 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNL 187 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 455677788888888888777655443 3444334444444333
No 276
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=67.99 E-value=1e+02 Score=28.58 Aligned_cols=85 Identities=15% Similarity=-0.028 Sum_probs=47.2
Q ss_pred hhcCccHHHHHHHHHHhhccCcchhhH-HH-HHHhhcccCchh-hHHHHHHHHHHHHH----HHHHHHHHHHhcccc--h
Q 016515 10 SSFSPNYVSLVIFRCFVGVGLGGVPVF-LA-YFLEFVPVSHRG-RWMVALSAFWTAGT----IFEASLAWVVMTRLN--W 80 (388)
Q Consensus 10 ~~~~~~~~~l~~~R~l~G~~~g~~~~~-~~-~~~E~~p~~~Rg-~~~~~~~~~~~~G~----~~~~~l~~~~~~~~~--W 80 (388)
+-..+++..|+++|++.|++......+ =+ ++.|+-.++.+. +....+.....++. +.+..++-...+..+ =
T Consensus 115 ~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~ 194 (354)
T PF05631_consen 115 TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP 194 (354)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC
Confidence 445789999999999999998765333 24 567875544332 22233322221222 222233333333333 3
Q ss_pred HHHHHHhhHHHHHH
Q 016515 81 RWLLAFSSVPSFAL 94 (388)
Q Consensus 81 R~~f~~~~i~~l~~ 94 (388)
..+|........+.
T Consensus 195 vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 195 VAPFDAAIVLLAVA 208 (354)
T ss_pred cchHHHHHHHHHHH
Confidence 77888766554444
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=56.93 E-value=2e+02 Score=28.08 Aligned_cols=39 Identities=8% Similarity=0.066 Sum_probs=33.4
Q ss_pred HHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 016515 37 LAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVM 75 (388)
Q Consensus 37 ~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~ 75 (388)
+.+..|.+..++-.|.-+++..+.++|.++++.+...+.
T Consensus 151 W~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 151 WGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567889999998889999999999999999987766654
No 278
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=56.36 E-value=2.1e+02 Score=28.12 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=32.7
Q ss_pred HHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016515 37 LAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMT 76 (388)
Q Consensus 37 ~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~ 76 (388)
+.+..|.++.++-.+.-+++..+..+|.++++.+.....+
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667799999988888999999999999988877666554
No 279
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=53.62 E-value=60 Score=21.09 Aligned_cols=43 Identities=7% Similarity=0.053 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHhhHHHHHHHHHHhcCCCCc
Q 016515 63 GTIFEASLAWVVMTRLNWRWLLAFSSVPSFALLLFYGLAPESP 105 (388)
Q Consensus 63 G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l~~~~~~~~~pESp 105 (388)
|.+++-..+......++.+....++.+.+++...+....|..|
T Consensus 14 ~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 14 GEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4444433333334467888888888888877766655666544
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=50.35 E-value=29 Score=31.58 Aligned_cols=65 Identities=20% Similarity=0.095 Sum_probs=51.7
Q ss_pred hhcCccHHHHHHHHHHhhccCcchhhH-HHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016515 10 SSFSPNYVSLVIFRCFVGVGLGGVPVF-LAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 74 (388)
Q Consensus 10 ~~~~~~~~~l~~~R~l~G~~~g~~~~~-~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~ 74 (388)
-.+.|+++..++.-+.-|+-.|+..+. +-=+.+-.++++|-.+++....+-++|..+++.++..+
T Consensus 336 ~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 336 YWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 347899999888889999876665544 33456778899999999999999999999988877543
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=49.20 E-value=77 Score=32.57 Aligned_cols=43 Identities=12% Similarity=0.245 Sum_probs=35.7
Q ss_pred eeeeecccccccchhhHHHHHHHHHHhH-hHhHHHHHHHHhhcc
Q 016515 304 VATIYAPEIYPTSARTTGFGVASSLGKV-GGMVCPLVAVGLVTS 346 (388)
Q Consensus 304 ~~~~~~~El~p~~~R~~~~~~~~~~~~i-~~~~~p~~~~~~~~~ 346 (388)
....++-...|++.|+.|.|+...+-|+ |.+-+|.+.+.++|.
T Consensus 606 p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 606 PGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred cceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 4566778889999999999999998876 555699999998775
No 282
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=47.62 E-value=64 Score=25.85 Aligned_cols=80 Identities=8% Similarity=0.105 Sum_probs=42.9
Q ss_pred HHHHhchhHHHHHHHHH-HHHHHHH-Hhh--hch----hHHHHHHHHHHHHhhhcccceeeeecccccccchhhHHHHHH
Q 016515 254 IVDKIGRKLSMVLMFVS-ACIFLLP-LVF--HQS----AVVTTVLLFGVRMCVTGTITVATIYAPEIYPTSARTTGFGVA 325 (388)
Q Consensus 254 l~d~~gRr~~~~~~~~~-~~~~~~~-~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~El~p~~~R~~~~~~~ 325 (388)
+.||+-||..+..+.=. .++..+. +++ ... ..+.+.+... .+|..+..++.|.+.+---.++.-|...|+-
T Consensus 57 Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~-~~Fg~gllGisYGilSaSWD~~r~GSllG~~ 135 (153)
T PF11947_consen 57 VSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSL-VFFGLGLLGISYGILSASWDPEREGSLLGWE 135 (153)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHH-HHHHHHHHhhhhhhcccccCCCCCCCcccHH
Confidence 56999999877655421 1121211 111 111 1122222222 2333455567777777777777788888887
Q ss_pred HHHHhHhHh
Q 016515 326 SSLGKVGGM 334 (388)
Q Consensus 326 ~~~~~i~~~ 334 (388)
.+--+++-+
T Consensus 136 e~~~N~~r~ 144 (153)
T PF11947_consen 136 EFKRNWGRM 144 (153)
T ss_pred HHHHhHHHH
Confidence 766555543
No 283
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=45.30 E-value=45 Score=32.10 Aligned_cols=61 Identities=16% Similarity=0.201 Sum_probs=48.6
Q ss_pred ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 016515 14 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV 74 (388)
Q Consensus 14 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~ 74 (388)
++-+..++.-++.|+..|-. .....+..+..++++|..+..+...+..+|..+|+.++..+
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777889999998864 34556677889999999999999999999999988876554
No 284
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=44.16 E-value=69 Score=28.97 Aligned_cols=68 Identities=12% Similarity=0.046 Sum_probs=50.1
Q ss_pred HHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc---hHHHHHHh
Q 016515 20 VIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLN---WRWLLAFS 87 (388)
Q Consensus 20 ~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~---WR~~f~~~ 87 (388)
+..-.+.|++-... .+.++.++-..|.+.-|+.-++.+..+.+|..+.+.++..+.+..| |--.|++.
T Consensus 356 y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~ 427 (459)
T KOG4686|consen 356 YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLI 427 (459)
T ss_pred HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHH
Confidence 34556667665443 3456778889999999999999999999999999999888765433 54455444
No 285
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.73 E-value=1.5e+02 Score=22.12 Aligned_cols=55 Identities=13% Similarity=-0.007 Sum_probs=33.9
Q ss_pred ccchhhHHHHHHHHHHhHhHhHHHHHHHHhhccc-c-hhHHHHHHHHHHHHHHHHhh
Q 016515 314 PTSARTTGFGVASSLGKVGGMVCPLVAVGLVTSC-H-LRLAVILFEVVFVLAIASSL 368 (388)
Q Consensus 314 p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~~~~-~-~~~~~~i~~~~~~~~~~~~~ 368 (388)
.++.++.+.++--+.-.++|++.-..++++.+.+ + .++..+++.++.+.+.+...
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv 92 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNV 92 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 4466777777777766777776666677777753 2 23444556666665555443
No 286
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=38.43 E-value=76 Score=31.74 Aligned_cols=77 Identities=14% Similarity=0.275 Sum_probs=53.2
Q ss_pred HHHHHHHHhhccCcch-hhHHHHHHhhcc---c-Cchh--hHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHH
Q 016515 18 SLVIFRCFVGVGLGGV-PVFLAYFLEFVP---V-SHRG--RWMVALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVP 90 (388)
Q Consensus 18 ~l~~~R~l~G~~~g~~-~~~~~~~~E~~p---~-~~Rg--~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~ 90 (388)
.++.+..+..+|.|+. +...++-+|-++ + +.+. .....+......|.+++..+....-++.+|.+-|.+..+.
T Consensus 154 ~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~ 233 (571)
T KOG1237|consen 154 VLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVL 233 (571)
T ss_pred HHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHH
Confidence 5667777788888886 777777777776 3 2233 4456667778888888766666655678999988877665
Q ss_pred HHHH
Q 016515 91 SFAL 94 (388)
Q Consensus 91 ~l~~ 94 (388)
..+.
T Consensus 234 ~~la 237 (571)
T KOG1237|consen 234 NALA 237 (571)
T ss_pred HHHH
Confidence 4443
No 287
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=37.37 E-value=90 Score=24.52 Aligned_cols=23 Identities=22% Similarity=0.185 Sum_probs=17.3
Q ss_pred HHhhcccCchhhHHHHHHHHHHH
Q 016515 40 FLEFVPVSHRGRWMVALSAFWTA 62 (388)
Q Consensus 40 ~~E~~p~~~Rg~~~~~~~~~~~~ 62 (388)
+.|++|++.|..+..........
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 46999999999887776654443
No 288
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=35.99 E-value=29 Score=22.98 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=22.4
Q ss_pred cHHHHHHHHHHhhccCcchhhHHHHHHhhcccCchh
Q 016515 15 NYVSLVIFRCFVGVGLGGVPVFLAYFLEFVPVSHRG 50 (388)
Q Consensus 15 ~~~~l~~~R~l~G~~~g~~~~~~~~~~E~~p~~~Rg 50 (388)
++..+...-..-|++.|.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 344455555555555555555667889999886654
No 289
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=35.79 E-value=48 Score=25.24 Aligned_cols=13 Identities=8% Similarity=0.038 Sum_probs=9.2
Q ss_pred HHHHhcCCCCchH
Q 016515 95 LLFYGLAPESPRY 107 (388)
Q Consensus 95 ~~~~~~~pESp~~ 107 (388)
+++++.+|+-|.-
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 5667788887753
No 290
>PF12854 PPR_1: PPR repeat
Probab=35.40 E-value=35 Score=19.17 Aligned_cols=17 Identities=24% Similarity=0.616 Sum_probs=13.5
Q ss_pred HHhccChHHHHHHHHHH
Q 016515 108 LCAKARTVDAHRILEKM 124 (388)
Q Consensus 108 l~~~~~~~~a~~~l~~~ 124 (388)
+.+.|+.++|.+.++++
T Consensus 17 ~Ck~G~~~~A~~l~~~M 33 (34)
T PF12854_consen 17 YCKAGRVDEAFELFDEM 33 (34)
T ss_pred HHHCCCHHHHHHHHHhC
Confidence 45689999999888764
No 291
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=35.39 E-value=1.2e+02 Score=29.36 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=29.5
Q ss_pred HHHHHhhcccCchhh-HHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Q 016515 37 LAYFLEFVPVSHRGR-WMVALSAFWTAGTIFEASLAWVVMTRLNWRWL 83 (388)
Q Consensus 37 ~~~~~E~~p~~~Rg~-~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~ 83 (388)
=+++.+.+.+++|-+ +.+.+..+..+|..++..++. ..+|+-.
T Consensus 164 ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~----y~~~~~~ 207 (498)
T KOG0637|consen 164 RALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS----YLGLYKI 207 (498)
T ss_pred HHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc----ccCceEE
Confidence 357888876655555 888989999988888655543 3455543
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=32.94 E-value=17 Score=32.98 Aligned_cols=61 Identities=16% Similarity=0.183 Sum_probs=2.1
Q ss_pred CccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 13 SPNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 13 ~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
-+|-+..++.=++.|+..|-. .....+..+..++++|..+..+...+...|..+|+.++..
T Consensus 245 ~~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 245 FNSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ----------------------HHHH------------------------------------
T ss_pred ccchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777788899998865 4556677899999999988888888888888888776654
No 293
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=32.66 E-value=4.9e+02 Score=25.55 Aligned_cols=41 Identities=12% Similarity=0.001 Sum_probs=34.4
Q ss_pred eeeeecccccccchhhHHHHHHHHHHhHhHhHHHHHHHHhh
Q 016515 304 VATIYAPEIYPTSARTTGFGVASSLGKVGGMVCPLVAVGLV 344 (388)
Q Consensus 304 ~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~p~~~~~~~ 344 (388)
+.|..++|++..+.-.+-.++.+..++++..++..+..++.
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57889999999999999999999999998888766555443
No 294
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=32.07 E-value=50 Score=21.77 Aligned_cols=29 Identities=17% Similarity=0.289 Sum_probs=17.8
Q ss_pred ccchHHHHHHhhHH---HHH-HHHHHhcCCCCc
Q 016515 77 RLNWRWLLAFSSVP---SFA-LLLFYGLAPESP 105 (388)
Q Consensus 77 ~~~WR~~f~~~~i~---~l~-~~~~~~~~pESp 105 (388)
..-+|..|.+..+. +++ -++++..+|+.|
T Consensus 28 ~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 28 PTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 34577777666553 222 355677789876
No 295
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=30.96 E-value=1.2e+02 Score=24.03 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=16.6
Q ss_pred HHhhcccCchhhHHHHHHHHHH
Q 016515 40 FLEFVPVSHRGRWMVALSAFWT 61 (388)
Q Consensus 40 ~~E~~p~~~Rg~~~~~~~~~~~ 61 (388)
+.|++|+..|..+...++....
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s 79 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTN 79 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 5799999999987776554433
No 296
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=30.56 E-value=4.8e+02 Score=24.84 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=24.9
Q ss_pred hccc-ceeeeecccccccchhhHHHHHHHHHHhHhHhHH
Q 016515 299 TGTI-TVATIYAPEIYPTSARTTGFGVASSLGKVGGMVC 336 (388)
Q Consensus 299 ~~~~-~~~~~~~~El~p~~~R~~~~~~~~~~~~i~~~~~ 336 (388)
+|.. ++...++++-.|++.+-.+..+...+-..|-.++
T Consensus 357 nGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 357 NGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred cchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 3443 4567889999999988887776665544433333
No 297
>smart00793 AgrB Accessory gene regulator B. The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein PUBMED:11195102. AgrB is involved in the proteolyt
Probab=30.13 E-value=1.7e+02 Score=24.28 Aligned_cols=26 Identities=8% Similarity=0.185 Sum_probs=15.5
Q ss_pred HHHHHHHHHhhcccc-cccCcchhhhH
Q 016515 358 VVFVLAIASSLLFPF-ETMGRELKDTV 383 (388)
Q Consensus 358 ~~~~~~~~~~~~~~p-et~~~~l~~~~ 383 (388)
+..+++.+.++.+.| ||++|+++++.
T Consensus 106 ii~i~s~~~i~~~APv~~~~kpi~~~e 132 (184)
T smart00793 106 GLFLIGLVLIYIYAPADTEKQPVIPEK 132 (184)
T ss_pred HHHHHHHHHHHhcCCcccccCCCCCHH
Confidence 333455555555544 89999865543
No 298
>TIGR00756 PPR pentatricopeptide repeat domain (PPR motif). This family has a similar consensus to the TPR domain (tetratricopeptide), pfam pfam00515, a 33-residue repeat. It is predicted to form a pair of antiparallel helices similar to that of TPR.
Probab=29.02 E-value=99 Score=16.41 Aligned_cols=20 Identities=25% Similarity=0.434 Sum_probs=15.8
Q ss_pred HHhccChHHHHHHHHHHHHh
Q 016515 108 LCAKARTVDAHRILEKMAFV 127 (388)
Q Consensus 108 l~~~~~~~~a~~~l~~~~~~ 127 (388)
+.++|+.++|.+.++++...
T Consensus 10 ~~~~~~~~~a~~~~~~M~~~ 29 (35)
T TIGR00756 10 LCKAGRVEEALELFKEMLER 29 (35)
T ss_pred HHHCCCHHHHHHHHHHHHHc
Confidence 35688999999999888653
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.69 E-value=1.9e+02 Score=21.66 Aligned_cols=20 Identities=20% Similarity=0.265 Sum_probs=13.2
Q ss_pred HHHHHHHHHh-chhHHHHHHH
Q 016515 249 ILSAIIVDKI-GRKLSMVLMF 268 (388)
Q Consensus 249 ~~~~~l~d~~-gRr~~~~~~~ 268 (388)
...||+.||+ |.++.-++.+
T Consensus 60 a~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHH
Confidence 4568889996 7776554433
No 300
>PF01535 PPR: PPR repeat; InterPro: IPR002885 This entry represents the PPR repeat. Pentatricopeptide repeat (PPR) proteins are characterised by tandem repeats of a degenerate 35 amino acid motif []. Most of PPR proteins have roles in mitochondria or plastid []. PPR repeats were discovered while screening Arabidopsis proteins for those predicted to be targeted to mitochondria or chloroplast [, ]. Some of these proteins have been shown to play a role in post-transcriptional processes within organelles and they are thought to be sequence-specific RNA-binding proteins [, , ]. Plant genomes have between one hundred to five hundred PPR genes per genome whereas non-plant genomes encode two to six PPR proteins. Although no PPR structures are yet known, the motif is predicted to fold into a helix-turn-helix structure similar to those found in the tetratricopeptide repeat (TPR) family (see PDOC50005 from PROSITEDOC) []. The plant PPR protein family has been divided in two subfamilies on the basis of their motif content and organisation [, ]. Examples of PPR repeat-containing proteins include PET309 P32522 from SWISSPROT, which may be involved in RNA stabilisation [], and crp1, which is involved in RNA processing []. The repeat is associated with a predicted plant protein O49549 from SWISSPROT that has a domain organisation similar to the human BRCA1 protein.
Probab=28.60 E-value=59 Score=16.99 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=13.6
Q ss_pred HhccChHHHHHHHHHHHH
Q 016515 109 CAKARTVDAHRILEKMAF 126 (388)
Q Consensus 109 ~~~~~~~~a~~~l~~~~~ 126 (388)
.+.|+.++|.+..+++.+
T Consensus 11 ~~~~~~~~a~~~~~~M~~ 28 (31)
T PF01535_consen 11 CKMGQFEEALEVFDEMRE 28 (31)
T ss_pred HccchHHHHHHHHHHHhH
Confidence 357888899888887744
No 301
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=27.62 E-value=1.3e+02 Score=23.68 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=17.3
Q ss_pred cccccccchhhHHHHHHHHHHh
Q 016515 309 APEIYPTSARTTGFGVASSLGK 330 (388)
Q Consensus 309 ~~El~p~~~R~~~~~~~~~~~~ 330 (388)
+.|++|+..|....+..+...+
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~ 81 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSS 81 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHH
Confidence 4799999999988877775443
No 302
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=27.11 E-value=2.9e+02 Score=21.18 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=15.1
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchHH
Q 016515 45 PVSHRGRWMVALSAFWTAGTIFEASLAWVVMTRLNWRW 82 (388)
Q Consensus 45 p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~~~~~~WR~ 82 (388)
|+=.||....=+.....+|.+++.+++..+....+|=.
T Consensus 15 PvV~rGlT~~El~~~a~~~~~~g~~~gl~la~~~g~~a 52 (121)
T PF11990_consen 15 PVVFRGLTADELGLAAGVGFVAGLVVGLPLALLTGWWA 52 (121)
T ss_pred CCeecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456655432233333333333333333222246643
No 303
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=26.97 E-value=2.4e+02 Score=20.09 Aligned_cols=40 Identities=20% Similarity=-0.015 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhHHHHH
Q 016515 54 VALSAFWTAGTIFEASLAWVVMTRLNWRWLLAFSSVPSFA 93 (388)
Q Consensus 54 ~~~~~~~~~G~~~~~~l~~~~~~~~~WR~~f~~~~i~~l~ 93 (388)
+.......+|.++|+++........+.|..+..+.+...+
T Consensus 30 g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 30 GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVL 69 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4566677778888887777655445556655555444433
No 304
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=26.50 E-value=1.7e+02 Score=27.32 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH
Q 016515 182 KLIRTTLLLWVLFFANVFSYYG 203 (388)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~ 203 (388)
+..+..+....+||.....+..
T Consensus 157 ~~ak~sl~fc~lWF~anl~~na 178 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNA 178 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555677766655543
No 305
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=26.49 E-value=1.2e+02 Score=17.82 Aligned_cols=21 Identities=14% Similarity=0.158 Sum_probs=16.6
Q ss_pred HHHhccChHHHHHHHHHHHHh
Q 016515 107 YLCAKARTVDAHRILEKMAFV 127 (388)
Q Consensus 107 ~l~~~~~~~~a~~~l~~~~~~ 127 (388)
.+...|+.++|.+.+++.-..
T Consensus 10 ~~~~~G~~~~A~~~~~~~l~~ 30 (44)
T PF13428_consen 10 AYRRLGQPDEAERLLRRALAL 30 (44)
T ss_pred HHHHcCCHHHHHHHHHHHHHH
Confidence 456789999999999887554
No 306
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=25.59 E-value=1.2e+02 Score=23.30 Aligned_cols=30 Identities=13% Similarity=0.088 Sum_probs=17.0
Q ss_pred ccchHHHHHHhhHH-----HHH-HHHHHhcCCCCch
Q 016515 77 RLNWRWLLAFSSVP-----SFA-LLLFYGLAPESPR 106 (388)
Q Consensus 77 ~~~WR~~f~~~~i~-----~l~-~~~~~~~~pESp~ 106 (388)
.+-.|.+|.+..+. .++ -+++++.+|+-|.
T Consensus 28 ~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~ 63 (121)
T TIGR02978 28 VWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPI 63 (121)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcc
Confidence 34566666554332 222 3556777888774
No 307
>PRK03612 spermidine synthase; Provisional
Probab=25.29 E-value=2.9e+02 Score=27.29 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=36.1
Q ss_pred HHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHHH-hcccc-hHHHHHHhhH
Q 016515 21 IFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWVV-MTRLN-WRWLLAFSSV 89 (388)
Q Consensus 21 ~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~~-~~~~~-WR~~f~~~~i 89 (388)
..-++.|+-.|+. |.......+... ++-|...+-......+|.++|+++..++ .+..| ++..+.++.+
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 3344556666654 444333333211 1224556677777788888888775554 34455 4555544433
No 308
>COG4708 Predicted membrane protein [Function unknown]
Probab=25.05 E-value=1.2e+02 Score=23.86 Aligned_cols=28 Identities=32% Similarity=0.688 Sum_probs=22.8
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHhchhH
Q 016515 235 VDVFIASLAELPGLILSAIIVDKIGRKL 262 (388)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~d~~gRr~ 262 (388)
+.-.-.+++++++..+++.+.|++|+|.
T Consensus 138 ltw~tta~gEfvsl~vg~~~m~kl~kr~ 165 (169)
T COG4708 138 LTWFTTALGEFVSLYVGALIMDKLGKRI 165 (169)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhhh
Confidence 3344557888999999999999999985
No 309
>PF13041 PPR_2: PPR repeat family
Probab=24.31 E-value=1.3e+02 Score=18.22 Aligned_cols=20 Identities=15% Similarity=0.360 Sum_probs=16.4
Q ss_pred HHhccChHHHHHHHHHHHHh
Q 016515 108 LCAKARTVDAHRILEKMAFV 127 (388)
Q Consensus 108 l~~~~~~~~a~~~l~~~~~~ 127 (388)
+.++|+.++|.+.++++.+.
T Consensus 13 ~~~~~~~~~a~~l~~~M~~~ 32 (50)
T PF13041_consen 13 YCKAGKFEEALKLFKEMKKR 32 (50)
T ss_pred HHHCcCHHHHHHHHHHHHHc
Confidence 45689999999999988654
No 310
>PRK01100 putative accessory gene regulator protein; Provisional
Probab=24.18 E-value=2.6e+02 Score=23.81 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=12.2
Q ss_pred HHHHHHhhcc-cccccCcchh
Q 016515 361 VLAIASSLLF-PFETMGRELK 380 (388)
Q Consensus 361 ~~~~~~~~~~-~pet~~~~l~ 380 (388)
+++.++++.+ |-||++|++.
T Consensus 121 ~~s~iii~~yAP~dt~nkPi~ 141 (210)
T PRK01100 121 GFILLNLFLYAPADTESLPLI 141 (210)
T ss_pred HHHHHHHHhcCCcCCccCCCC
Confidence 3444444444 4589999865
No 311
>COG4291 Predicted membrane protein [Function unknown]
Probab=23.91 E-value=2.4e+02 Score=23.76 Aligned_cols=18 Identities=44% Similarity=0.560 Sum_probs=11.9
Q ss_pred hcCCCCchHHHhccChHH
Q 016515 99 GLAPESPRYLCAKARTVD 116 (388)
Q Consensus 99 ~~~pESp~~l~~~~~~~~ 116 (388)
....-||+++.++-|.||
T Consensus 65 ~lp~~tp~~l~a~Ar~~D 82 (228)
T COG4291 65 RLPRLTPSYLKAHARRED 82 (228)
T ss_pred hcccCCHHHHHHhccccC
Confidence 334569999987655544
No 312
>PF04647 AgrB: Accessory gene regulator B; InterPro: IPR006741 The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein [] involved in the proteolytic processing of AgrD, and may have both proteolytic and transporter activities, facilitating the export of the processed AgrD peptide []. ; GO: 0016020 membrane
Probab=23.75 E-value=2.4e+02 Score=23.11 Aligned_cols=25 Identities=16% Similarity=0.523 Sum_probs=14.4
Q ss_pred HHHHHHHHhhcc-cccccCcchhhhH
Q 016515 359 VFVLAIASSLLF-PFETMGRELKDTV 383 (388)
Q Consensus 359 ~~~~~~~~~~~~-~pet~~~~l~~~~ 383 (388)
..+++.+..+.+ |-|+++|++++..
T Consensus 107 ~~~~~~~~i~~~aPv~~~~kpl~~~e 132 (185)
T PF04647_consen 107 LFIISFIIIIIYAPVDTPNKPLDSEE 132 (185)
T ss_pred HHHHHHHHHHHhcccccccCcCChHH
Confidence 344444445544 4489999884433
No 313
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=23.48 E-value=3.1e+02 Score=20.32 Aligned_cols=42 Identities=12% Similarity=0.217 Sum_probs=22.1
Q ss_pred hHHHHHHhhHHHHHHHHHHhcCCCCchHHHhccChHHHHHHH
Q 016515 80 WRWLLAFSSVPSFALLLFYGLAPESPRYLCAKARTVDAHRIL 121 (388)
Q Consensus 80 WR~~f~~~~i~~l~~~~~~~~~pESp~~l~~~~~~~~a~~~l 121 (388)
|--...+.++.+.+...+....----.|....+|+++|.+.+
T Consensus 37 ~sq~~lv~glvgW~~sYlfRV~t~~MTy~~Q~k~Ye~a~~~~ 78 (104)
T PF11460_consen 37 WSQALLVLGLVGWVSSYLFRVVTGKMTYMQQRKDYEEAVDQL 78 (104)
T ss_pred HHHHHHHHHHHHHHhHHHhhhccCCCcHHHHHHHHHHHHHHH
Confidence 555555555544444443333333344555666777776544
No 314
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=22.13 E-value=2.1e+02 Score=21.21 Aligned_cols=30 Identities=23% Similarity=0.133 Sum_probs=18.1
Q ss_pred HHHHHHHHHhhcccccccCcchhhhHHhhh
Q 016515 358 VVFVLAIASSLLFPFETMGRELKDTVDAIE 387 (388)
Q Consensus 358 ~~~~~~~~~~~~~~pet~~~~l~~~~~~~~ 387 (388)
++.+++.+..+++.--|++.+..+..++.|
T Consensus 43 v~glvgW~~sYlfRV~t~~MTy~~Q~k~Ye 72 (104)
T PF11460_consen 43 VLGLVGWVSSYLFRVVTGKMTYMQQRKDYE 72 (104)
T ss_pred HHHHHHHHhHHHhhhccCCCcHHHHHHHHH
Confidence 334466666676655567766666655544
No 315
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=20.86 E-value=94 Score=30.00 Aligned_cols=38 Identities=16% Similarity=0.055 Sum_probs=27.8
Q ss_pred cccceeeeecccccccchhhH-HHHHHHHHHhHhHhHHH
Q 016515 300 GTITVATIYAPEIYPTSARTT-GFGVASSLGKVGGMVCP 337 (388)
Q Consensus 300 ~~~~~~~~~~~El~p~~~R~~-~~~~~~~~~~i~~~~~p 337 (388)
.....+=.+.+++.-.+.|.+ |.+....+..+|+.++-
T Consensus 158 ~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY 196 (498)
T KOG0637|consen 158 TLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGY 196 (498)
T ss_pred hhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeee
Confidence 344455678899987777777 88888877777777663
No 316
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=20.80 E-value=1.3e+02 Score=22.32 Aligned_cols=29 Identities=17% Similarity=0.373 Sum_probs=20.5
Q ss_pred ccchHHHHHHhhHHHHHH-HHHHhcCCCCc
Q 016515 77 RLNWRWLLAFSSVPSFAL-LLFYGLAPESP 105 (388)
Q Consensus 77 ~~~WR~~f~~~~i~~l~~-~~~~~~~pESp 105 (388)
..+|+.+|+++...+++. .+.+.+.||+.
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 458999999877666554 45566678764
No 317
>PRK10263 DNA translocase FtsK; Provisional
Probab=20.78 E-value=1.2e+03 Score=26.17 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=11.4
Q ss_pred HhhhhHHHHHHHHHHHHhch
Q 016515 241 SLAELPGLILSAIIVDKIGR 260 (388)
Q Consensus 241 ~~~~~~~~~~~~~l~d~~gR 260 (388)
+.++.+|..++..+..-+|-
T Consensus 62 Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccchHHHHHHHHHHHHHhH
Confidence 34455666666666555663
No 318
>PF13812 PPR_3: Pentatricopeptide repeat domain
Probab=20.66 E-value=1.5e+02 Score=15.78 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=14.0
Q ss_pred hccChHHHHHHHHHHHHh
Q 016515 110 AKARTVDAHRILEKMAFV 127 (388)
Q Consensus 110 ~~~~~~~a~~~l~~~~~~ 127 (388)
+.|+.+++.+.++.+.+.
T Consensus 13 ~~g~~~~a~~~~~~M~~~ 30 (34)
T PF13812_consen 13 KAGDPDAALQLFDEMKEQ 30 (34)
T ss_pred HCCCHHHHHHHHHHHHHh
Confidence 468888998888887653
No 319
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=20.44 E-value=1.7e+02 Score=27.77 Aligned_cols=60 Identities=17% Similarity=0.261 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHHhhccCcch-hhHHHHHHhhcccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 016515 14 PNYVSLVIFRCFVGVGLGGV-PVFLAYFLEFVPVSHRGRWMVALSAFWTAGTIFEASLAWV 73 (388)
Q Consensus 14 ~~~~~l~~~R~l~G~~~g~~-~~~~~~~~E~~p~~~Rg~~~~~~~~~~~~G~~~~~~l~~~ 73 (388)
.+-+.+++.-++.|++.|=. .....+..+..|++++-.+..+...+...|...|+.+++.
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 34456778888899988743 3445677788999999888888888888888887766543
No 320
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.35 E-value=7.1e+02 Score=23.24 Aligned_cols=31 Identities=16% Similarity=0.400 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHHHHhchhHHHHHHHHHHHHH
Q 016515 244 ELPGLILSAIIVDKIGRKLSMVLMFVSACIF 274 (388)
Q Consensus 244 ~~~~~~~~~~l~d~~gRr~~~~~~~~~~~~~ 274 (388)
-+.++++.+.++.++|-|.++.++...-...
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALY 101 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3455666779999999999998776665443
No 321
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=20.04 E-value=1.6e+02 Score=21.88 Aligned_cols=21 Identities=19% Similarity=0.110 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHhhcccccccCc
Q 016515 356 FEVVFVLAIASSLLFPFETMGR 377 (388)
Q Consensus 356 ~~~~~~~~~~~~~~~~pet~~~ 377 (388)
+.++.++.. +.+.+.|||.-+
T Consensus 67 ~~~~~v~~~-~~~~y~PD~~i~ 87 (105)
T PF10183_consen 67 FSGSLVFGG-VFLAYKPDTSIQ 87 (105)
T ss_pred HHHHHHHHH-HHHHcCCCCCHH
Confidence 444444444 444456898754
Done!