Query 016516
Match_columns 388
No_of_seqs 164 out of 382
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 14:53:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016516.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016516hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1e09a_ d.129.3.1 (A:) Major t 45.9 4.5 0.00033 33.4 2.2 35 173-215 123-157 (159)
2 d1fm4a_ d.129.3.1 (A:) Major t 42.6 5.8 0.00042 32.6 2.4 18 198-215 140-157 (159)
3 d1icxa_ d.129.3.1 (A:) Plant p 40.4 6.1 0.00045 32.5 2.2 18 197-214 137-154 (155)
4 d1xdfa1 d.129.3.1 (A:1-157) Pl 33.7 6.1 0.00044 32.7 1.1 34 173-214 122-155 (157)
5 d2pvba_ a.39.1.4 (A:) Parvalbu 33.0 66 0.0048 23.7 7.2 69 165-237 10-81 (107)
6 d2c2la2 g.44.1.2 (A:225-304) S 32.4 8.4 0.00061 27.5 1.6 19 198-216 60-78 (80)
7 d1wu9a1 a.245.1.1 (A:191-249) 21.3 39 0.0028 23.6 3.4 22 310-331 2-23 (59)
8 d2qzga1 a.29.14.1 (A:4-91) Unc 20.5 18 0.0013 27.4 1.5 21 160-181 51-71 (88)
9 d2qsba1 a.29.14.1 (A:2-86) Unc 20.0 16 0.0012 27.5 1.1 22 159-181 48-69 (85)
10 d1fxka_ a.2.5.1 (A:) Prefoldin 16.2 1.1E+02 0.0077 22.6 5.3 35 308-342 71-105 (107)
No 1
>d1e09a_ d.129.3.1 (A:) Major tree pollen allergen {Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229]}
Probab=45.94 E-value=4.5 Score=33.39 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=24.3
Q ss_pred cCCCCCChhHHHHHHhhcCCcccccchhHHHHHHHHHHhCCCC
Q 016516 173 ASDANLKPEKFYNLAISLPDQARLFDDGLYRAVDIYLKAHSWI 215 (388)
Q Consensus 173 A~D~nL~~~kF~~Lae~lP~~aR~~hDgLYrAIDiYLK~Hp~l 215 (388)
..+..+++.++....+. --++|+|||-||-+||..
T Consensus 123 ~~~~~~~~e~~~~~~e~--------~~~~~K~iEayLlanp~~ 157 (159)
T d1e09a_ 123 KGNVEIKEEHVKAGKEK--------ASNLFKLIETYLKGHPDA 157 (159)
T ss_dssp CSSCCCCHHHHHHHHHH--------HHHHHHHHHHHHHHCTTS
T ss_pred CCCCCCCHHHHHHHHHH--------HHHHHHHHHHHHhhChhh
Confidence 34556666666544322 357999999999999973
No 2
>d1fm4a_ d.129.3.1 (A:) Major tree pollen allergen {European white birch (Betula pendula), Bet v 1-l [TaxId: 3505]}
Probab=42.60 E-value=5.8 Score=32.63 Aligned_cols=18 Identities=50% Similarity=0.582 Sum_probs=16.0
Q ss_pred chhHHHHHHHHHHhCCCC
Q 016516 198 DDGLYRAVDIYLKAHSWI 215 (388)
Q Consensus 198 hDgLYrAIDiYLK~Hp~l 215 (388)
-.++++||+-||-+||..
T Consensus 140 ~~~~~K~iE~YLlanp~~ 157 (159)
T d1fm4a_ 140 GETLLRAVESYLLAHSDA 157 (159)
T ss_dssp HHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHhhChhh
Confidence 478999999999999973
No 3
>d1icxa_ d.129.3.1 (A:) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]}
Probab=40.40 E-value=6.1 Score=32.52 Aligned_cols=18 Identities=33% Similarity=0.482 Sum_probs=15.9
Q ss_pred cchhHHHHHHHHHHhCCC
Q 016516 197 FDDGLYRAVDIYLKAHSW 214 (388)
Q Consensus 197 ~hDgLYrAIDiYLK~Hp~ 214 (388)
.--|+++||+-||-+||.
T Consensus 137 ~~~~~fK~iE~YLlanPd 154 (155)
T d1icxa_ 137 KGLGLFKAIEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhhCcC
Confidence 356899999999999996
No 4
>d1xdfa1 d.129.3.1 (A:1-157) Plant pathogenesis-related protein PR10 {Yellow lupine (Lupinus luteus) [TaxId: 3873]}
Probab=33.67 E-value=6.1 Score=32.65 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=25.1
Q ss_pred cCCCCCChhHHHHHHhhcCCcccccchhHHHHHHHHHHhCCC
Q 016516 173 ASDANLKPEKFYNLAISLPDQARLFDDGLYRAVDIYLKAHSW 214 (388)
Q Consensus 173 A~D~nL~~~kF~~Lae~lP~~aR~~hDgLYrAIDiYLK~Hp~ 214 (388)
..|..+++++.....+. -.++|+||+-||-+||.
T Consensus 122 ~~~~~~~~e~ik~~~e~--------~~~~~K~iEaYLlanpd 155 (157)
T d1xdfa1 122 KGDAQPNEEEGKAAKAR--------GDAFFKAIENYLSAHPE 155 (157)
T ss_dssp SSSSCCCHHHHHHHHHH--------HHTTTHHHHHHHHTSGG
T ss_pred CCCCCCCHHHHHHHHHH--------HHHHHHHHHHHHhhCCC
Confidence 34566677776555432 47899999999999994
No 5
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}
Probab=32.99 E-value=66 Score=23.69 Aligned_cols=69 Identities=17% Similarity=0.126 Sum_probs=52.8
Q ss_pred hhhhhhhhcCCCCCChhHHHHHHhhcCCcccccchhHHHHHHHHHHhCCC-CCHHhhhhhhcccc--cCCCCHHHh
Q 016516 165 IDGYLSEIASDANLKPEKFYNLAISLPDQARLFDDGLYRAVDIYLKAHSW-IPEAEREKICGVLD--CQKLTLEAC 237 (388)
Q Consensus 165 vD~YLaEvA~D~nL~~~kF~~Lae~lP~~aR~~hDgLYrAIDiYLK~Hp~-lse~Er~~lC~~ld--c~KLS~eac 237 (388)
|+.++.++..|..+....|...... .....|-|..|-+.|=+.+.+ |+..|-..+++-+. ..++|.+-+
T Consensus 10 i~~~~~~~~~~gsi~~~eF~~~~~l----~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~ 81 (107)
T d2pvba_ 10 VAAALAACSAADSFKHKEFFAKVGL----ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAET 81 (107)
T ss_dssp HHHHHHHTCSTTCCCHHHHHHHHTG----GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHH
T ss_pred HHHHHHhccCCCCcCHHHHHHHHhc----ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHH
Confidence 6777888888899999999887652 234567899999999888886 89999888877663 456776643
No 6
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.37 E-value=8.4 Score=27.53 Aligned_cols=19 Identities=11% Similarity=0.585 Sum_probs=16.2
Q ss_pred chhHHHHHHHHHHhCCCCC
Q 016516 198 DDGLYRAVDIYLKAHSWIP 216 (388)
Q Consensus 198 hDgLYrAIDiYLK~Hp~ls 216 (388)
...|..+|+-||+.|||..
T Consensus 60 N~~L~~~I~~~l~~~~~~~ 78 (80)
T d2c2la2 60 NLAMKEVIDAFISENGWVE 78 (80)
T ss_dssp CHHHHHHHHHHHTTCSCSS
T ss_pred HHHHHHHHHHHHHHCCCcC
Confidence 3568999999999999864
No 7
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.26 E-value=39 Score=23.58 Aligned_cols=22 Identities=27% Similarity=0.428 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q 016516 310 ENQVLRLDMDSMRTRVHQLERE 331 (388)
Q Consensus 310 En~~Lr~ele~m~~Rv~eLEke 331 (388)
|..+|..++..++.-|..||||
T Consensus 2 e~~~L~~ei~elk~~v~~lEkE 23 (59)
T d1wu9a1 2 EAAELMQQVNVLKLTVEDLEKE 23 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888888888888889988
No 8
>d2qzga1 a.29.14.1 (A:4-91) Uncharacterized protein MMP1188 {Methanococcus maripaludis [TaxId: 39152]}
Probab=20.52 E-value=18 Score=27.45 Aligned_cols=21 Identities=29% Similarity=0.450 Sum_probs=15.9
Q ss_pred hhHhhhhhhhhhhcCCCCCChh
Q 016516 160 LVGKLIDGYLSEIASDANLKPE 181 (388)
Q Consensus 160 ~VakLvD~YLaEvA~D~nL~~~ 181 (388)
+.|.-+ ++|.||+.|||+|..
T Consensus 51 Raa~ai-s~LDeIs~DPNmP~h 71 (88)
T d2qzga1 51 RSATAI-QYLDDISEDPNMPIH 71 (88)
T ss_dssp HHHHHH-HHHHHHTTCTTCCHH
T ss_pred HHHHHH-HHHHHhhcCCCCCcH
Confidence 444443 678999999999874
No 9
>d2qsba1 a.29.14.1 (A:2-86) Uncharacterized protein Ta0600 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.00 E-value=16 Score=27.50 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=16.2
Q ss_pred hhhHhhhhhhhhhhcCCCCCChh
Q 016516 159 MLVGKLIDGYLSEIASDANLKPE 181 (388)
Q Consensus 159 ~~VakLvD~YLaEvA~D~nL~~~ 181 (388)
.+.|.-+ ++|.||+.|||+|..
T Consensus 48 vRaa~ai-s~LdeIs~DPNmP~h 69 (85)
T d2qsba1 48 LRCATVL-SMLDEMANDPNVPAH 69 (85)
T ss_dssp HHHHHHH-HHHHHHHTCTTSCHH
T ss_pred HHHHHHH-HHHHHhhcCCCCChH
Confidence 3444443 678999999999874
No 10
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=16.20 E-value=1.1e+02 Score=22.63 Aligned_cols=35 Identities=11% Similarity=0.213 Sum_probs=18.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHhhh
Q 016516 308 VRENQVLRLDMDSMRTRVHQLERECSTMKKVIENI 342 (388)
Q Consensus 308 ~rEn~~Lr~ele~m~~Rv~eLEkec~~Mk~~l~k~ 342 (388)
....+.+..+++++...+..|+++...++..+.++
T Consensus 71 ~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~~~ 105 (107)
T d1fxka_ 71 QEKLETLQLREKTIERQEERVMKKLQEMQVNIQEA 105 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555555555555555555555543
Done!