Query 016518
Match_columns 388
No_of_seqs 341 out of 3267
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 14:54:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 3.7E-49 1.3E-53 394.6 33.6 313 36-387 20-337 (457)
2 3jxv_A 70 kDa peptidyl-prolyl 100.0 6.3E-48 2.1E-52 372.5 16.7 263 37-302 2-355 (356)
3 1q1c_A FK506-binding protein 4 100.0 3.6E-43 1.2E-47 327.0 28.0 227 43-308 48-280 (280)
4 2if4_A ATFKBP42; FKBP-like, al 100.0 2.5E-28 8.5E-33 234.3 18.2 196 162-387 48-250 (338)
5 1p5q_A FKBP52, FK506-binding p 99.9 1.2E-25 4.1E-30 215.3 24.2 197 155-387 17-216 (336)
6 3o5e_A Peptidyl-prolyl CIS-tra 99.9 8.2E-25 2.8E-29 183.5 10.8 117 36-154 24-142 (144)
7 1r9h_A FKB-6, FK506 binding pr 99.9 2.1E-24 7.2E-29 179.1 12.0 121 44-167 12-135 (135)
8 3jxv_A 70 kDa peptidyl-prolyl 99.9 1E-23 3.6E-28 203.2 18.7 153 44-202 125-283 (356)
9 3o5q_A Peptidyl-prolyl CIS-tra 99.9 2.8E-24 9.5E-29 176.8 11.8 115 38-154 10-126 (128)
10 3kz7_A FK506-binding protein 3 99.9 5.9E-24 2E-28 172.8 13.2 108 44-153 2-118 (119)
11 1yat_A FK506 binding protein; 99.9 8.5E-24 2.9E-28 170.2 12.9 110 42-153 2-112 (113)
12 2y78_A Peptidyl-prolyl CIS-tra 99.9 2E-23 6.9E-28 172.5 13.8 110 41-153 23-133 (133)
13 2f4e_A ATFKBP42; FKBP-like, al 99.9 2.9E-23 9.9E-28 180.3 14.4 124 31-157 34-162 (180)
14 4dip_A Peptidyl-prolyl CIS-tra 99.9 2.2E-23 7.5E-28 170.9 12.7 113 41-155 7-123 (125)
15 2lkn_A AH receptor-interacting 99.9 4.5E-24 1.6E-28 181.1 8.1 114 42-158 6-161 (165)
16 2ppn_A FK506-binding protein 1 99.9 2.4E-23 8.2E-28 165.9 11.6 105 47-153 1-106 (107)
17 2f4e_A ATFKBP42; FKBP-like, al 99.9 7.9E-23 2.7E-27 177.5 14.7 128 162-319 48-180 (180)
18 2lgo_A FKBP; infectious diseas 99.9 4.4E-23 1.5E-27 169.8 11.8 110 42-153 18-130 (130)
19 3o5e_A Peptidyl-prolyl CIS-tra 99.9 1.2E-22 4.1E-27 170.3 14.1 117 155-302 25-143 (144)
20 1jvw_A Macrophage infectivity 99.9 3.7E-23 1.3E-27 177.0 11.0 113 38-155 29-143 (167)
21 2vn1_A 70 kDa peptidylprolyl i 99.9 9.5E-23 3.3E-27 167.9 13.1 116 38-155 7-127 (129)
22 3b7x_A FK506-binding protein 6 99.9 2.2E-23 7.6E-28 172.7 9.0 110 42-154 22-133 (134)
23 3uf8_A Ubiquitin-like protein 99.9 1.4E-22 4.7E-27 180.1 14.5 111 40-153 98-209 (209)
24 2awg_A 38 kDa FK-506 binding p 99.9 1.3E-22 4.5E-27 164.5 12.7 111 38-154 4-117 (118)
25 3oe2_A Peptidyl-prolyl CIS-tra 99.9 8.1E-23 2.8E-27 181.3 11.8 110 37-154 108-218 (219)
26 2jwx_A FKBP38NTD, FK506-bindin 99.9 2.8E-22 9.7E-27 169.6 13.9 113 38-156 34-150 (157)
27 1fd9_A Protein (macrophage inf 99.9 1.6E-22 5.5E-27 179.5 12.7 112 38-154 98-210 (213)
28 2d9f_A FK506-binding protein 8 99.9 1.4E-22 4.7E-27 168.1 11.2 119 34-158 4-126 (135)
29 1u79_A FKBP-type peptidyl-prol 99.9 6.3E-23 2.1E-27 168.9 8.7 111 40-153 6-128 (129)
30 3o5q_A Peptidyl-prolyl CIS-tra 99.9 3.7E-22 1.3E-26 164.1 12.9 116 156-302 10-127 (128)
31 1q6h_A FKBP-type peptidyl-prol 99.9 3.9E-22 1.3E-26 178.3 13.4 111 38-153 113-223 (224)
32 2if4_A ATFKBP42; FKBP-like, al 99.9 1.5E-21 5E-26 187.1 17.3 122 31-155 34-160 (338)
33 3kz7_A FK506-binding protein 3 99.9 1.8E-21 6.3E-26 158.0 14.2 109 163-301 4-119 (119)
34 1r9h_A FKB-6, FK506 binding pr 99.9 1.4E-21 4.7E-26 162.1 13.0 117 156-303 5-123 (135)
35 2vn1_A 70 kDa peptidylprolyl i 99.9 5.2E-21 1.8E-25 157.5 15.0 116 156-302 9-127 (129)
36 2lkn_A AH receptor-interacting 99.9 1.8E-21 6.2E-26 165.1 11.8 117 161-305 8-161 (165)
37 1yat_A FK506 binding protein; 99.9 7.6E-21 2.6E-25 152.9 14.7 108 163-301 6-113 (113)
38 2ppn_A FK506-binding protein 1 99.9 4.2E-21 1.4E-25 152.9 12.4 107 164-301 1-107 (107)
39 3b7x_A FK506-binding protein 6 99.8 2E-21 7E-26 160.8 9.8 115 155-301 18-133 (134)
40 2awg_A 38 kDa FK-506 binding p 99.8 1.2E-20 4.1E-25 152.9 14.0 112 155-301 5-117 (118)
41 1jvw_A Macrophage infectivity 99.8 9.3E-21 3.2E-25 162.0 13.5 122 161-317 35-156 (167)
42 2jwx_A FKBP38NTD, FK506-bindin 99.8 1.5E-20 5.1E-25 159.0 13.5 116 155-305 35-152 (157)
43 2lgo_A FKBP; infectious diseas 99.8 2.6E-20 9E-25 153.2 14.1 104 166-300 27-130 (130)
44 2d9f_A FK506-binding protein 8 99.8 8.9E-21 3E-25 157.2 11.3 124 155-312 9-133 (135)
45 2pbc_A FK506-binding protein 2 99.8 1.4E-20 4.7E-25 148.5 10.5 96 59-156 3-99 (102)
46 2y78_A Peptidyl-prolyl CIS-tra 99.8 4.9E-20 1.7E-24 152.1 14.0 108 161-300 26-133 (133)
47 3uf8_A Ubiquitin-like protein 99.8 8.9E-20 3E-24 162.0 16.3 123 146-300 87-209 (209)
48 4dip_A Peptidyl-prolyl CIS-tra 99.8 9.2E-20 3.2E-24 149.2 14.2 114 158-303 7-124 (125)
49 3oe2_A Peptidyl-prolyl CIS-tra 99.8 3.4E-19 1.2E-23 158.0 13.8 104 161-301 115-218 (219)
50 1q1c_A FK506-binding protein 4 99.8 6.2E-19 2.1E-23 163.7 15.2 116 156-302 42-159 (280)
51 1fd9_A Protein (macrophage inf 99.8 7.4E-19 2.5E-23 155.9 12.5 108 161-302 104-211 (213)
52 2pbc_A FK506-binding protein 2 99.8 8E-19 2.8E-23 138.3 11.3 86 214-303 14-99 (102)
53 1u79_A FKBP-type peptidyl-prol 99.8 6.9E-19 2.3E-23 144.7 10.2 110 162-300 11-128 (129)
54 1q6h_A FKBP-type peptidyl-prol 99.8 2.8E-18 9.7E-23 153.2 13.6 105 162-301 120-224 (224)
55 4dt4_A FKBP-type 16 kDa peptid 99.8 1.9E-18 6.5E-23 147.2 9.9 125 61-201 24-157 (169)
56 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 3E-18 1E-22 170.7 10.7 116 156-302 22-139 (457)
57 2kr7_A FKBP-type peptidyl-prol 99.7 2.2E-17 7.4E-22 139.0 13.4 124 60-201 5-138 (151)
58 1p5q_A FKBP52, FK506-binding p 99.7 1.8E-17 6.1E-22 158.4 14.3 107 42-156 21-132 (336)
59 2kfw_A FKBP-type peptidyl-prol 99.7 2.9E-17 9.9E-22 143.4 10.6 130 61-201 2-133 (196)
60 3pr9_A FKBP-type peptidyl-prol 99.7 6.9E-18 2.4E-22 142.4 6.3 127 62-201 2-142 (157)
61 2k8i_A SLYD, peptidyl-prolyl C 99.7 9.5E-17 3.3E-21 137.5 12.6 122 62-201 3-133 (171)
62 1ix5_A FKBP; ppiase, isomerase 99.7 1E-17 3.4E-22 141.1 6.1 128 61-201 1-143 (151)
63 3prb_A FKBP-type peptidyl-prol 99.7 5.3E-17 1.8E-21 145.0 6.8 127 62-201 2-142 (231)
64 1hxv_A Trigger factor; FKBP fo 99.6 6.3E-16 2.2E-20 123.5 8.6 90 53-153 22-112 (113)
65 3cgm_A SLYD, peptidyl-prolyl C 99.6 7.8E-16 2.7E-20 130.2 9.5 118 62-201 3-129 (158)
66 4dt4_A FKBP-type 16 kDa peptid 99.5 1.9E-14 6.7E-19 122.5 7.3 64 214-278 33-96 (169)
67 3pr9_A FKBP-type peptidyl-prol 99.5 5.1E-14 1.7E-18 118.7 7.8 63 214-278 10-85 (157)
68 1hxv_A Trigger factor; FKBP fo 99.5 1.5E-13 5.1E-18 109.7 8.2 75 214-301 38-113 (113)
69 3prb_A FKBP-type peptidyl-prol 99.4 3.2E-13 1.1E-17 120.5 9.0 63 214-278 10-85 (231)
70 2k8i_A SLYD, peptidyl-prolyl C 99.4 1.4E-12 4.7E-17 111.6 12.1 62 214-277 11-72 (171)
71 2kr7_A FKBP-type peptidyl-prol 99.4 8.5E-13 2.9E-17 110.9 9.3 63 214-278 15-78 (151)
72 1ix5_A FKBP; ppiase, isomerase 99.4 2.6E-13 9E-18 114.0 5.6 64 214-278 10-86 (151)
73 2kfw_A FKBP-type peptidyl-prol 99.4 1.8E-12 6.1E-17 113.1 10.5 62 214-277 11-72 (196)
74 3cgm_A SLYD, peptidyl-prolyl C 99.2 1.2E-11 4.2E-16 104.4 7.9 58 214-278 11-68 (158)
75 1w26_A Trigger factor, TF; cha 99.2 4.5E-11 1.5E-15 117.4 9.4 89 60-157 156-244 (432)
76 1t11_A Trigger factor, TF; hel 99.1 8E-11 2.8E-15 114.1 6.1 98 60-166 159-256 (392)
77 1w26_A Trigger factor, TF; cha 98.9 2.6E-09 8.8E-14 104.9 9.2 77 214-302 166-242 (432)
78 3rkv_A Putative peptidylprolyl 98.8 8.9E-09 3E-13 86.4 7.1 77 311-387 4-83 (162)
79 2fbn_A 70 kDa peptidylprolyl i 98.7 4.9E-08 1.7E-12 84.7 10.3 98 290-387 10-108 (198)
80 1t11_A Trigger factor, TF; hel 98.6 1.9E-08 6.5E-13 97.4 5.5 76 215-302 170-245 (392)
81 2hr2_A Hypothetical protein; a 98.5 1.3E-07 4.5E-12 79.5 7.3 77 309-388 2-78 (159)
82 4gcn_A Protein STI-1; structur 98.5 2.4E-07 8.2E-12 74.8 7.4 59 314-387 4-62 (127)
83 4gco_A Protein STI-1; structur 98.4 5.9E-07 2E-11 72.4 6.9 57 316-387 11-67 (126)
84 1ihg_A Cyclophilin 40; ppiase 98.1 2.6E-06 9E-11 81.9 6.1 78 310-387 215-293 (370)
85 3upv_A Heat shock protein STI1 97.8 3.4E-05 1.2E-09 61.0 6.9 56 317-387 3-58 (126)
86 3gty_X Trigger factor, TF; cha 97.8 3E-05 1E-09 76.0 6.8 86 61-167 154-239 (433)
87 2l6j_A TPR repeat-containing p 97.7 5.6E-05 1.9E-09 57.8 5.7 56 317-387 3-58 (111)
88 3sz7_A HSC70 cochaperone (SGT) 97.5 0.00023 7.8E-09 59.1 6.9 58 315-387 8-65 (164)
89 2v5f_A Prolyl 4-hydroxylase su 97.4 0.00035 1.2E-08 53.9 6.4 62 318-387 5-66 (104)
90 3q49_B STIP1 homology and U bo 97.2 0.00069 2.4E-08 53.7 6.5 55 318-387 9-63 (137)
91 3gyz_A Chaperone protein IPGC; 97.1 0.00082 2.8E-08 55.7 6.9 31 318-348 36-66 (151)
92 1a17_A Serine/threonine protei 97.1 0.0011 3.7E-08 54.2 7.6 62 311-387 6-67 (166)
93 3ma5_A Tetratricopeptide repea 97.1 0.00088 3E-08 50.8 6.5 54 319-387 8-61 (100)
94 3gyz_A Chaperone protein IPGC; 97.1 0.00079 2.7E-08 55.8 6.6 54 319-387 71-124 (151)
95 2dba_A Smooth muscle cell asso 97.0 0.0012 4.1E-08 52.7 6.8 59 317-387 27-85 (148)
96 2kc7_A BFR218_protein; tetratr 97.0 0.0011 3.7E-08 49.6 5.3 51 322-387 4-55 (99)
97 1elw_A TPR1-domain of HOP; HOP 96.9 0.0014 4.7E-08 49.8 5.9 33 317-349 3-35 (118)
98 1na3_A Designed protein CTPR2; 96.9 0.0025 8.4E-08 46.4 6.9 55 318-387 9-63 (91)
99 1elr_A TPR2A-domain of HOP; HO 96.9 0.0022 7.6E-08 49.6 6.7 56 317-387 3-58 (131)
100 3k9i_A BH0479 protein; putativ 96.8 0.0023 7.9E-08 49.7 6.7 56 317-387 26-81 (117)
101 4ga2_A E3 SUMO-protein ligase 96.8 0.0024 8.3E-08 52.3 6.5 54 319-387 32-85 (150)
102 2xcb_A PCRH, regulatory protei 96.7 0.0031 1.1E-07 50.8 6.9 31 318-348 18-48 (142)
103 2vgx_A Chaperone SYCD; alterna 96.7 0.0031 1.1E-07 51.6 6.9 31 318-348 21-51 (148)
104 4gco_A Protein STI-1; structur 96.7 0.0029 9.9E-08 50.3 6.5 55 318-387 47-101 (126)
105 4gcn_A Protein STI-1; structur 96.7 0.0035 1.2E-07 49.8 6.9 62 318-387 42-103 (127)
106 3fp2_A TPR repeat-containing p 96.7 0.0013 4.3E-08 64.9 5.2 67 306-387 13-79 (537)
107 3vtx_A MAMA; tetratricopeptide 96.7 0.002 6.9E-08 54.0 5.7 54 319-387 6-59 (184)
108 2gw1_A Mitochondrial precursor 96.6 0.0025 8.6E-08 62.2 6.7 59 313-387 1-59 (514)
109 2vyi_A SGTA protein; chaperone 96.6 0.0049 1.7E-07 47.5 7.2 37 312-348 6-42 (131)
110 2lni_A Stress-induced-phosphop 96.6 0.0029 9.9E-08 49.3 5.6 32 317-348 15-46 (133)
111 3vtx_A MAMA; tetratricopeptide 96.5 0.0042 1.4E-07 51.9 6.5 53 320-387 109-161 (184)
112 3ffl_A Anaphase-promoting comp 96.5 0.0045 1.5E-07 51.7 6.3 69 317-387 62-142 (167)
113 2vgx_A Chaperone SYCD; alterna 96.5 0.0046 1.6E-07 50.5 6.5 52 321-387 58-109 (148)
114 2xcb_A PCRH, regulatory protei 96.5 0.0048 1.6E-07 49.7 6.5 52 321-387 55-106 (142)
115 3upv_A Heat shock protein STI1 96.5 0.0052 1.8E-07 48.0 6.5 54 319-387 39-92 (126)
116 3gty_X Trigger factor, TF; cha 96.5 0.0045 1.5E-07 60.4 7.1 58 222-302 170-227 (433)
117 2kck_A TPR repeat; tetratricop 96.4 0.0039 1.3E-07 46.7 4.8 54 321-387 43-97 (112)
118 2kat_A Uncharacterized protein 96.3 0.0076 2.6E-07 46.3 6.3 54 319-387 20-73 (115)
119 3sz7_A HSC70 cochaperone (SGT) 96.3 0.0072 2.4E-07 49.8 6.5 54 319-387 46-99 (164)
120 2hr2_A Hypothetical protein; a 96.3 0.0051 1.8E-07 51.3 5.5 67 318-388 57-123 (159)
121 4i17_A Hypothetical protein; T 96.3 0.0068 2.3E-07 52.6 6.6 31 319-349 8-38 (228)
122 1hxi_A PEX5, peroxisome target 96.3 0.0063 2.2E-07 47.8 5.8 29 321-349 20-48 (121)
123 3u3w_A Transcriptional activat 96.3 0.0075 2.6E-07 54.9 7.1 63 317-387 154-216 (293)
124 2kck_A TPR repeat; tetratricop 96.2 0.009 3.1E-07 44.7 6.2 52 321-387 9-60 (112)
125 2xev_A YBGF; tetratricopeptide 96.2 0.0074 2.5E-07 47.0 5.8 54 322-387 43-96 (129)
126 2qfc_A PLCR protein; TPR, HTH, 96.2 0.0091 3.1E-07 54.4 7.1 63 317-387 154-216 (293)
127 3rkv_A Putative peptidylprolyl 96.0 0.012 4.1E-07 48.2 6.5 55 318-387 63-117 (162)
128 3q49_B STIP1 homology and U bo 95.9 0.015 5.2E-07 45.6 6.5 54 319-387 44-97 (137)
129 4ga2_A E3 SUMO-protein ligase 95.9 0.014 4.9E-07 47.5 6.4 55 318-387 65-119 (150)
130 1wao_1 Serine/threonine protei 95.9 0.0036 1.2E-07 61.9 3.2 20 368-387 75-94 (477)
131 3qky_A Outer membrane assembly 95.9 0.013 4.6E-07 52.0 6.7 58 318-387 15-72 (261)
132 2xev_A YBGF; tetratricopeptide 95.9 0.013 4.6E-07 45.4 5.9 56 320-387 4-59 (129)
133 4gyw_A UDP-N-acetylglucosamine 95.8 0.012 4.2E-07 61.3 6.9 32 317-348 8-39 (723)
134 1hxi_A PEX5, peroxisome target 95.8 0.012 4E-07 46.2 5.3 54 319-387 52-105 (121)
135 3ro3_A PINS homolog, G-protein 95.8 0.019 6.6E-07 45.7 6.6 33 317-349 8-40 (164)
136 1hh8_A P67PHOX, NCF-2, neutrop 95.7 0.017 5.9E-07 49.2 6.5 54 319-387 38-91 (213)
137 2lni_A Stress-induced-phosphop 95.7 0.019 6.6E-07 44.4 6.2 54 319-387 51-104 (133)
138 3ro3_A PINS homolog, G-protein 95.7 0.024 8.2E-07 45.1 7.0 61 318-387 49-109 (164)
139 2yhc_A BAMD, UPF0169 lipoprote 95.7 0.017 5.9E-07 50.3 6.3 57 319-387 5-61 (225)
140 1na0_A Designed protein CTPR3; 95.6 0.028 9.5E-07 42.6 6.7 27 321-347 12-38 (125)
141 2v6y_A AAA family ATPase, P60 95.6 0.014 4.7E-07 43.0 4.4 68 309-376 1-70 (83)
142 3urz_A Uncharacterized protein 95.5 0.023 7.8E-07 49.0 6.5 50 323-387 59-108 (208)
143 1elw_A TPR1-domain of HOP; HOP 95.5 0.028 9.5E-07 42.2 6.3 53 320-387 40-92 (118)
144 2dba_A Smooth muscle cell asso 95.4 0.032 1.1E-06 44.1 6.6 55 318-387 65-119 (148)
145 1elr_A TPR2A-domain of HOP; HO 95.4 0.036 1.2E-06 42.5 6.6 60 320-387 40-99 (131)
146 2ifu_A Gamma-SNAP; membrane fu 95.4 0.027 9.1E-07 51.7 6.7 60 318-387 116-175 (307)
147 2fbn_A 70 kDa peptidylprolyl i 95.3 0.029 1E-06 47.5 6.5 55 318-387 88-142 (198)
148 1qqe_A Vesicular transport pro 95.3 0.029 9.8E-07 51.1 6.8 63 316-387 35-97 (292)
149 3n71_A Histone lysine methyltr 95.3 0.035 1.2E-06 55.0 7.8 69 312-387 303-371 (490)
150 2l6j_A TPR repeat-containing p 95.3 0.04 1.4E-06 41.2 6.5 61 319-388 39-99 (111)
151 2pl2_A Hypothetical conserved 95.2 0.026 8.9E-07 48.9 6.0 54 319-387 6-59 (217)
152 3qww_A SET and MYND domain-con 95.2 0.027 9.1E-07 55.0 6.4 64 317-387 339-402 (433)
153 2vyi_A SGTA protein; chaperone 95.2 0.043 1.5E-06 41.9 6.5 53 320-387 48-100 (131)
154 1a17_A Serine/threonine protei 95.2 0.039 1.3E-06 44.5 6.5 53 320-387 49-101 (166)
155 1qqe_A Vesicular transport pro 95.1 0.04 1.4E-06 50.1 7.1 61 318-387 117-178 (292)
156 4i17_A Hypothetical protein; T 95.0 0.05 1.7E-06 47.0 7.0 62 318-387 76-137 (228)
157 3ulq_A Response regulator aspa 94.9 0.052 1.8E-06 51.1 7.5 63 316-387 182-244 (383)
158 2yhc_A BAMD, UPF0169 lipoprote 94.8 0.046 1.6E-06 47.5 6.5 54 322-387 151-204 (225)
159 1ihg_A Cyclophilin 40; ppiase 94.8 0.044 1.5E-06 52.1 6.8 54 319-387 274-327 (370)
160 2qfc_A PLCR protein; TPR, HTH, 94.8 0.039 1.3E-06 50.1 6.2 59 319-386 197-255 (293)
161 3q15_A PSP28, response regulat 94.8 0.049 1.7E-06 51.3 6.9 63 316-387 180-242 (378)
162 3urz_A Uncharacterized protein 94.7 0.033 1.1E-06 47.9 5.2 66 318-387 4-74 (208)
163 1hh8_A P67PHOX, NCF-2, neutrop 94.7 0.048 1.6E-06 46.3 6.1 69 319-387 72-141 (213)
164 3gw4_A Uncharacterized protein 94.7 0.08 2.7E-06 44.3 7.4 62 317-387 25-86 (203)
165 3uq3_A Heat shock protein STI1 94.7 0.062 2.1E-06 46.6 6.9 55 318-387 139-193 (258)
166 1na0_A Designed protein CTPR3; 94.7 0.072 2.5E-06 40.2 6.5 53 320-387 45-97 (125)
167 2ifu_A Gamma-SNAP; membrane fu 94.6 0.078 2.7E-06 48.5 7.6 62 317-387 35-96 (307)
168 3ro2_A PINS homolog, G-protein 94.6 0.08 2.7E-06 47.6 7.6 31 318-348 5-35 (338)
169 2pl2_A Hypothetical conserved 94.5 0.059 2E-06 46.6 6.3 51 321-387 121-171 (217)
170 2w2u_A Hypothetical P60 katani 94.5 0.039 1.3E-06 40.5 4.3 69 307-375 7-77 (83)
171 4g1t_A Interferon-induced prot 94.5 0.047 1.6E-06 52.7 6.2 64 318-387 51-114 (472)
172 4a1s_A PINS, partner of inscut 94.5 0.075 2.6E-06 50.1 7.4 34 315-348 45-78 (411)
173 3ulq_A Response regulator aspa 94.4 0.094 3.2E-06 49.3 8.0 64 316-387 141-204 (383)
174 3edt_B KLC 2, kinesin light ch 94.4 0.057 2E-06 47.4 6.1 64 317-387 42-105 (283)
175 4gyw_A UDP-N-acetylglucosamine 94.4 0.043 1.5E-06 57.1 6.0 29 320-348 45-73 (723)
176 3edt_B KLC 2, kinesin light ch 94.4 0.056 1.9E-06 47.5 5.9 63 318-387 127-189 (283)
177 3n71_A Histone lysine methyltr 94.4 0.056 1.9E-06 53.6 6.4 64 317-387 350-413 (490)
178 3qww_A SET and MYND domain-con 94.4 0.089 3.1E-06 51.2 7.8 69 312-387 292-360 (433)
179 2r5s_A Uncharacterized protein 94.3 0.033 1.1E-06 46.3 4.1 53 320-387 8-60 (176)
180 3u3w_A Transcriptional activat 94.3 0.067 2.3E-06 48.5 6.5 63 316-387 194-257 (293)
181 2cpt_A SKD1 protein, vacuolar 94.3 0.13 4.5E-06 40.3 7.1 72 306-377 5-79 (117)
182 3q15_A PSP28, response regulat 94.2 0.1 3.6E-06 49.0 7.9 64 316-387 139-202 (378)
183 3uq3_A Heat shock protein STI1 94.2 0.12 4.1E-06 44.7 7.7 32 317-348 4-35 (258)
184 1xnf_A Lipoprotein NLPI; TPR, 94.2 0.09 3.1E-06 46.2 6.9 31 318-348 43-73 (275)
185 3u4t_A TPR repeat-containing p 94.1 0.082 2.8E-06 46.5 6.5 52 321-387 77-128 (272)
186 3qwp_A SET and MYND domain-con 94.0 0.067 2.3E-06 52.0 6.1 64 317-387 328-391 (429)
187 1xnf_A Lipoprotein NLPI; TPR, 94.0 0.09 3.1E-06 46.2 6.5 54 319-387 78-131 (275)
188 3gw4_A Uncharacterized protein 94.0 0.12 4.2E-06 43.1 7.0 62 317-387 106-167 (203)
189 3ieg_A DNAJ homolog subfamily 93.9 0.15 5E-06 46.5 8.0 59 318-387 234-292 (359)
190 2c2l_A CHIP, carboxy terminus 93.9 0.081 2.8E-06 47.9 6.1 32 318-349 4-35 (281)
191 2v6x_A Vacuolar protein sortin 93.8 0.096 3.3E-06 38.6 5.2 67 309-375 4-71 (85)
192 3sf4_A G-protein-signaling mod 93.8 0.12 4.2E-06 48.1 7.3 31 318-348 9-39 (406)
193 1wao_1 Serine/threonine protei 93.7 0.082 2.8E-06 52.1 6.2 55 317-386 5-59 (477)
194 2y4t_A DNAJ homolog subfamily 93.7 0.11 3.6E-06 49.6 6.9 32 317-348 25-56 (450)
195 2e2e_A Formate-dependent nitri 93.7 0.14 4.8E-06 42.1 6.8 31 319-349 45-75 (177)
196 2vq2_A PILW, putative fimbrial 93.6 0.14 4.9E-06 43.1 6.9 20 368-387 77-97 (225)
197 3qou_A Protein YBBN; thioredox 93.6 0.12 4.1E-06 46.9 6.7 55 318-387 117-171 (287)
198 2fo7_A Synthetic consensus TPR 93.5 0.11 3.9E-06 39.4 5.5 51 322-387 39-89 (136)
199 4eqf_A PEX5-related protein; a 93.5 0.079 2.7E-06 49.1 5.4 21 367-387 133-153 (365)
200 3qwp_A SET and MYND domain-con 93.4 0.18 6E-06 49.0 7.9 66 315-387 284-349 (429)
201 3nf1_A KLC 1, kinesin light ch 93.4 0.095 3.3E-06 46.8 5.5 65 316-387 25-89 (311)
202 3nf1_A KLC 1, kinesin light ch 93.3 0.14 4.9E-06 45.6 6.7 63 318-387 153-215 (311)
203 1wfd_A Hypothetical protein 15 93.2 0.19 6.4E-06 37.7 6.0 67 311-377 8-75 (93)
204 4eqf_A PEX5-related protein; a 93.1 0.14 4.9E-06 47.3 6.5 21 367-387 281-301 (365)
205 2fo7_A Synthetic consensus TPR 93.1 0.17 5.9E-06 38.4 6.0 52 321-387 72-123 (136)
206 3as5_A MAMA; tetratricopeptide 93.1 0.18 6.3E-06 40.8 6.5 51 322-387 114-164 (186)
207 2y4t_A DNAJ homolog subfamily 93.1 0.18 6.2E-06 48.0 7.4 57 319-386 258-314 (450)
208 4a5x_A MITD1, MIT domain-conta 92.9 0.2 6.8E-06 37.0 5.7 60 316-375 14-74 (86)
209 3k9i_A BH0479 protein; putativ 92.8 0.03 1E-06 43.1 1.1 46 330-387 2-47 (117)
210 3as5_A MAMA; tetratricopeptide 92.8 0.2 6.8E-06 40.6 6.3 20 368-387 111-130 (186)
211 2h6f_A Protein farnesyltransfe 92.8 0.16 5.3E-06 48.5 6.4 21 367-387 166-186 (382)
212 4abn_A Tetratricopeptide repea 92.8 0.11 3.8E-06 50.9 5.4 55 318-387 102-157 (474)
213 2h6f_A Protein farnesyltransfe 92.7 0.18 6.2E-06 48.1 6.6 66 321-387 134-220 (382)
214 1w3b_A UDP-N-acetylglucosamine 92.6 0.17 5.8E-06 47.3 6.3 30 319-348 68-97 (388)
215 1fch_A Peroxisomal targeting s 92.6 0.12 4.2E-06 47.6 5.2 20 368-387 133-152 (368)
216 3u4t_A TPR repeat-containing p 92.5 0.23 7.7E-06 43.6 6.6 53 323-387 42-94 (272)
217 2ho1_A Type 4 fimbrial biogene 92.5 0.14 4.7E-06 44.5 5.1 30 318-347 37-66 (252)
218 3qky_A Outer membrane assembly 92.5 0.26 8.8E-06 43.4 7.0 68 320-387 91-168 (261)
219 3hym_B Cell division cycle pro 92.5 0.16 5.6E-06 45.7 5.8 53 320-387 238-290 (330)
220 1zu2_A Mitochondrial import re 92.4 0.095 3.3E-06 43.5 3.7 55 318-387 36-111 (158)
221 2q7f_A YRRB protein; TPR, prot 92.4 0.23 8E-06 42.5 6.5 20 368-387 126-145 (243)
222 2ho1_A Type 4 fimbrial biogene 92.4 0.24 8.1E-06 43.0 6.5 20 368-387 142-161 (252)
223 2vq2_A PILW, putative fimbrial 92.3 0.25 8.6E-06 41.6 6.5 51 322-387 117-167 (225)
224 1fch_A Peroxisomal targeting s 92.3 0.22 7.5E-06 45.8 6.5 30 319-348 218-247 (368)
225 2e2e_A Formate-dependent nitri 92.3 0.23 7.8E-06 40.8 6.0 53 320-387 80-135 (177)
226 2q7f_A YRRB protein; TPR, prot 92.2 0.26 9.1E-06 42.1 6.6 21 367-387 159-179 (243)
227 2vsy_A XCC0866; transferase, g 92.2 0.18 6.1E-06 50.4 6.2 28 320-347 25-52 (568)
228 3ieg_A DNAJ homolog subfamily 92.1 0.3 1E-05 44.3 7.2 32 318-349 120-151 (359)
229 2pzi_A Probable serine/threoni 92.0 0.19 6.5E-06 51.7 6.3 29 319-347 434-462 (681)
230 3sf4_A G-protein-signaling mod 91.9 0.32 1.1E-05 45.2 7.3 63 316-387 45-107 (406)
231 1na3_A Designed protein CTPR2; 91.9 0.38 1.3E-05 34.1 6.2 47 320-381 45-91 (91)
232 4a1s_A PINS, partner of inscut 91.8 0.28 9.7E-06 46.0 6.8 62 317-387 85-146 (411)
233 4b4t_Q 26S proteasome regulato 91.7 0.11 3.8E-06 49.3 3.8 65 323-387 9-75 (434)
234 3ro2_A PINS homolog, G-protein 91.7 0.3 1E-05 43.6 6.6 63 316-387 41-103 (338)
235 3cv0_A Peroxisome targeting si 91.6 0.17 5.8E-06 45.5 4.9 20 368-387 90-109 (327)
236 2vsy_A XCC0866; transferase, g 91.6 0.25 8.6E-06 49.3 6.5 53 320-387 59-111 (568)
237 3mkr_A Coatomer subunit epsilo 91.5 0.29 1E-05 44.5 6.3 42 331-387 179-220 (291)
238 3cv0_A Peroxisome targeting si 91.4 0.32 1.1E-05 43.6 6.5 21 367-387 240-260 (327)
239 3hym_B Cell division cycle pro 91.4 0.34 1.1E-05 43.5 6.6 63 319-387 194-256 (330)
240 4abn_A Tetratricopeptide repea 91.1 0.23 8E-06 48.6 5.6 55 321-387 216-278 (474)
241 2pzi_A Probable serine/threoni 91.1 0.23 7.8E-06 51.2 5.7 52 320-387 469-520 (681)
242 4gns_B Protein CSD3, chitin bi 90.0 0.35 1.2E-05 50.3 5.8 53 320-387 339-391 (754)
243 1w3b_A UDP-N-acetylglucosamine 89.7 0.45 1.5E-05 44.4 6.0 21 367-387 339-359 (388)
244 2gw1_A Mitochondrial precursor 89.2 0.53 1.8E-05 45.3 6.3 54 319-387 40-93 (514)
245 2crb_A Nuclear receptor bindin 89.0 0.58 2E-05 34.5 4.7 37 314-350 11-47 (97)
246 1b89_A Protein (clathrin heavy 88.9 0.1 3.4E-06 50.9 0.7 45 320-387 124-168 (449)
247 2r5s_A Uncharacterized protein 88.6 0.69 2.3E-05 38.0 5.8 56 319-387 109-164 (176)
248 3fp2_A TPR repeat-containing p 88.5 0.58 2E-05 45.5 6.1 54 319-387 60-113 (537)
249 4b4t_Q 26S proteasome regulato 87.2 1.2 4E-05 42.0 7.2 61 318-387 135-195 (434)
250 3mkr_A Coatomer subunit epsilo 86.6 1.3 4.3E-05 40.1 6.7 51 321-386 203-253 (291)
251 2xpi_A Anaphase-promoting comp 86.3 1.1 3.7E-05 44.3 6.6 55 318-387 516-570 (597)
252 1hz4_A MALT regulatory protein 84.8 1.6 5.5E-05 40.3 6.7 62 317-387 52-113 (373)
253 3mkr_B Coatomer subunit alpha; 84.6 3.2 0.00011 38.3 8.2 60 321-380 105-164 (320)
254 3bee_A Putative YFRE protein; 84.6 2.1 7.2E-05 31.6 5.9 33 318-350 43-75 (93)
255 1xi4_A Clathrin heavy chain; a 84.6 0.8 2.7E-05 50.8 4.8 15 235-249 323-337 (1630)
256 1hz4_A MALT regulatory protein 84.0 2.9 9.8E-05 38.5 8.0 61 317-387 13-73 (373)
257 3mv2_A Coatomer subunit alpha; 83.5 2.8 9.5E-05 38.6 7.3 60 321-380 117-176 (325)
258 3bee_A Putative YFRE protein; 83.5 2.6 8.8E-05 31.1 6.0 54 320-388 8-64 (93)
259 2vkj_A TM1634; membrane protei 83.3 5.7 0.0002 29.0 7.3 34 316-349 51-84 (106)
260 1ouv_A Conserved hypothetical 82.8 1.8 6.3E-05 37.9 5.9 23 324-346 44-70 (273)
261 2xpi_A Anaphase-promoting comp 82.4 1.9 6.3E-05 42.6 6.3 29 320-348 375-403 (597)
262 1ouv_A Conserved hypothetical 81.5 2.2 7.6E-05 37.3 5.9 28 320-347 76-107 (273)
263 2kat_A Uncharacterized protein 80.9 1.6 5.3E-05 32.7 4.1 38 335-387 2-39 (115)
264 2c2l_A CHIP, carboxy terminus 80.1 1.4 4.7E-05 39.6 4.0 55 318-387 38-92 (281)
265 1klx_A Cysteine rich protein B 80.1 3.2 0.00011 32.6 5.9 52 319-387 58-117 (138)
266 3rjv_A Putative SEL1 repeat pr 79.6 1.7 5.8E-05 37.0 4.3 30 318-347 18-47 (212)
267 2ond_A Cleavage stimulation fa 78.7 4.4 0.00015 36.4 7.1 15 334-348 80-94 (308)
268 2ymb_A MITD1, MIT domain-conta 77.9 0.45 1.5E-05 42.5 0.0 65 312-376 17-82 (257)
269 4g1t_A Interferon-induced prot 77.8 1.5 5.3E-05 41.7 3.8 30 321-350 97-126 (472)
270 2dl1_A Spartin; SPG20, MIT, st 77.4 6.5 0.00022 30.4 6.4 68 315-382 19-93 (116)
271 1zu2_A Mitochondrial import re 77.0 1.4 4.7E-05 36.4 2.7 40 330-384 14-53 (158)
272 2ond_A Cleavage stimulation fa 76.3 3.8 0.00013 36.9 5.9 51 323-387 104-154 (308)
273 3qou_A Protein YBBN; thioredox 75.7 3.9 0.00013 36.5 5.8 56 319-387 220-275 (287)
274 3ffl_A Anaphase-promoting comp 74.3 7 0.00024 32.4 6.3 61 320-387 22-83 (167)
275 2v5f_A Prolyl 4-hydroxylase su 73.9 6.1 0.00021 29.3 5.6 32 319-350 47-78 (104)
276 1pc2_A Mitochondria fission pr 73.4 6.4 0.00022 32.1 5.9 52 323-387 37-91 (152)
277 3rjv_A Putative SEL1 repeat pr 69.5 5.4 0.00018 33.7 4.9 26 322-347 89-118 (212)
278 3mkq_A Coatomer beta'-subunit; 69.1 4.4 0.00015 41.6 5.0 65 322-387 685-756 (814)
279 1b89_A Protein (clathrin heavy 66.2 6.9 0.00023 37.9 5.3 32 314-345 144-175 (449)
280 4f3v_A ESX-1 secretion system 65.0 6.4 0.00022 35.6 4.6 55 321-387 174-228 (282)
281 1klx_A Cysteine rich protein B 63.8 6.8 0.00023 30.7 4.1 47 324-387 31-81 (138)
282 2ff4_A Probable regulatory pro 62.2 26 0.00089 33.0 8.5 70 318-387 115-191 (388)
283 3ax2_A Mitochondrial import re 62.2 13 0.00043 26.2 4.7 40 311-350 10-49 (73)
284 4f3v_A ESX-1 secretion system 60.9 8.6 0.00029 34.8 4.6 55 320-387 137-191 (282)
285 4b4t_R RPN7, 26S proteasome re 60.8 5.6 0.00019 38.3 3.6 56 320-387 133-188 (429)
286 2kc7_A BFR218_protein; tetratr 60.3 10 0.00035 26.9 4.3 31 320-350 37-67 (99)
287 3eab_A Spastin; spastin, MIT, 60.2 23 0.0008 25.9 5.9 49 332-380 33-85 (89)
288 2zan_A Vacuolar protein sortin 58.3 2.1 7.1E-05 41.5 0.0 39 312-350 5-43 (444)
289 2wb7_A PT26-6P; extra chromoso 57.3 7.4 0.00025 37.8 3.6 41 312-352 423-466 (526)
290 3ma5_A Tetratricopeptide repea 56.2 11 0.00037 27.3 3.8 31 320-350 43-73 (100)
291 2xm6_A Protein corresponding t 52.1 19 0.00066 34.5 5.9 21 367-387 399-423 (490)
292 1om2_A Protein (mitochondrial 51.2 27 0.00091 25.9 5.0 41 310-350 12-52 (95)
293 2xm6_A Protein corresponding t 50.6 25 0.00086 33.6 6.4 29 319-347 40-72 (490)
294 2oo2_A Hypothetical protein AF 48.2 31 0.0011 25.0 4.9 39 311-349 28-66 (86)
295 2pmr_A Uncharacterized protein 46.2 34 0.0012 24.9 4.9 39 311-349 32-70 (87)
296 3mv2_B Coatomer subunit epsilo 46.1 22 0.00074 32.6 4.8 53 322-387 104-156 (310)
297 3txn_A 26S proteasome regulato 45.8 29 0.001 32.9 5.8 56 323-387 104-159 (394)
298 2ooe_A Cleavage stimulation fa 45.6 19 0.00064 35.0 4.7 25 323-347 326-350 (530)
299 2ooe_A Cleavage stimulation fa 45.2 20 0.00069 34.7 4.8 43 330-387 403-445 (530)
300 2jpu_A ORF C02003 protein; sol 42.0 17 0.00059 28.6 3.0 33 316-348 5-37 (129)
301 3mkq_B Coatomer subunit alpha; 39.7 25 0.00085 29.3 3.8 27 320-346 36-62 (177)
302 1nzn_A CGI-135 protein, fissio 38.1 21 0.00071 28.0 2.9 23 365-387 72-94 (126)
303 3htx_A HEN1; HEN1, small RNA m 37.7 62 0.0021 34.1 7.0 62 60-125 559-652 (950)
304 2rkl_A Vacuolar protein sortin 34.3 63 0.0021 21.1 4.2 40 310-349 12-51 (53)
305 3e4b_A ALGK; tetratricopeptide 31.4 55 0.0019 31.1 5.3 27 322-348 180-209 (452)
306 3lvg_A Clathrin heavy chain 1; 29.3 1.5 5.2E-05 43.1 -6.1 46 320-388 146-191 (624)
307 2xze_A STAM-binding protein; h 26.7 91 0.0031 24.9 5.0 40 309-348 31-70 (146)
308 3isy_A Bsupi, intracellular pr 21.6 2.8E+02 0.0094 21.3 7.4 33 64-96 16-48 (120)
309 3mv2_B Coatomer subunit epsilo 21.3 58 0.002 29.7 3.1 40 332-387 192-231 (310)
310 3e4b_A ALGK; tetratricopeptide 21.3 1E+02 0.0036 29.1 5.2 18 329-346 262-279 (452)
311 3ly7_A Transcriptional activat 21.1 1.3E+02 0.0045 28.1 5.6 48 324-387 283-330 (372)
312 2lj4_A Peptidyl-prolyl CIS-tra 21.0 30 0.001 26.4 1.0 30 243-273 79-108 (115)
No 1
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=3.7e-49 Score=394.57 Aligned_cols=313 Identities=34% Similarity=0.586 Sum_probs=263.3
Q ss_pred cCCCce-eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhccccc
Q 016518 36 KVGEER-GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKK 114 (388)
Q Consensus 36 ~~~~~~-~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~ 114 (388)
..+.++ ..+++|++|+|+++|+|...|..||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++
T Consensus 20 ~~~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~ 99 (457)
T 1kt0_A 20 EQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKR 99 (457)
T ss_dssp -------------CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCT
T ss_pred CCcccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCC
Confidence 344555 3579999999999999955599999999999999989999999998888999999999999999999999999
Q ss_pred CceEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccceeecccCcCccceeeEeecCCCCCCCCCCCeEEEEEEEec
Q 016518 115 RECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVML 193 (388)
Q Consensus 115 Ge~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~~~~dv~~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l 193 (388)
|++++| +|||+++||..|.+ .||++++++|+|+|+++... ++..|+++.++++++|.++..|..++.|+++
T Consensus 100 Ge~~~~--~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~----- 171 (457)
T 1kt0_A 100 GEICHL--LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGYSNPNEGATVEIH----- 171 (457)
T ss_dssp TCEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCSCCCCTTCEEEEE-----
T ss_pred CCEEEE--EEChHHhccccCCCCCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCCCCCCCCCEEEEE-----
Confidence 999999 99999999999876 89999999999999998754 7789999999999999999999999999865
Q ss_pred CCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEEccCC---cccchHHHHHccccCCcEEEEEecCC
Q 016518 194 GDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEE---QVIAGLDRVAATMKKEEWAIVTINHE 270 (388)
Q Consensus 194 ~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~---~v~~gle~~l~~M~~Ge~~~v~i~~~ 270 (388)
|+|++ +|++||++ +++|.+|++ .++++|+.|+..|+.||++.|.++|.
T Consensus 172 ----------------------y~g~~-~g~~f~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~ 222 (457)
T 1kt0_A 172 ----------------------LEGRC-GGRMFDCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPR 222 (457)
T ss_dssp ----------------------EEEEE-TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGG
T ss_pred ----------------------EEEEe-CCeEEecC------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcc
Confidence 55666 77888876 699999977 48999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCCCCeEEEEEEEeeeecCcCccccCchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 271 YGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 271 ~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~~~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
++|+..|... ..|||++.+.|.+.|.++......|.+..+++...+..++..|+.+|+.|+|..|+..|++|+.+.+.
T Consensus 223 ~ay~~~g~~~--~~ip~~~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~ 300 (457)
T 1kt0_A 223 YGFGEAGKPK--FGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM 300 (457)
T ss_dssp GTTCSSCBGG--GTBCTTCCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCcc--cCCCCCCEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc
Confidence 9999998742 47999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 351 DGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.....+++..++..++..+|+|+|.||+++++|++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 337 (457)
T 1kt0_A 301 EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAV 337 (457)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 7777888888999999999999999999999999987
No 2
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=6.3e-48 Score=372.52 Aligned_cols=263 Identities=54% Similarity=0.897 Sum_probs=127.1
Q ss_pred CCCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCc
Q 016518 37 VGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (388)
Q Consensus 37 ~~~~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 116 (388)
++++..++++|++|+++++|+|+..|+.||.|++||++++.||++|++|+.++.|+.|.+|.+++|+||+++|.+|++|+
T Consensus 2 ~~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 2 VGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCC
Confidence 46667889999999999999997789999999999999999999999999888999999999999999999999999999
Q ss_pred eEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccceeecccCcCccceeeEeecCCCCCCCCCCCeEEEEEEEecCC
Q 016518 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGD 195 (388)
Q Consensus 117 ~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~~~~dv~~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~ 195 (388)
+++| +|||+++||..+.+ .||++++|+|+|+|+++....|+..|+++.++++++|.++.+|..++.|++||++++.+
T Consensus 82 ~~~~--~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~d 159 (356)
T 3jxv_A 82 NALF--TIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLED 159 (356)
T ss_dssp --------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETT
T ss_pred EEEE--EEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECC
Confidence 9999 99999999999988 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecCCC---------------------------------------Cce---------------eEE-----------
Q 016518 196 GTMVAKTPE---------------------------------------EGV---------------EFY----------- 210 (388)
Q Consensus 196 ~~~v~~~~~---------------------------------------~g~---------------~~~----------- 210 (388)
++++.++.. .|. .+.
T Consensus 160 gt~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~d 239 (356)
T 3jxv_A 160 GTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTE 239 (356)
T ss_dssp SCEEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEE
T ss_pred CCEEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccc
Confidence 886654210 000 000
Q ss_pred ----------e---e---------c---eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEE
Q 016518 211 ----------L---K---------D---VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIV 265 (388)
Q Consensus 211 ----------~---~---------~---v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v 265 (388)
+ + + +||+|++.||++||++.+.+++|+.|.+|.+++++||+.+|.+|++||++.|
T Consensus 240 v~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v 319 (356)
T 3jxv_A 240 IGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALV 319 (356)
T ss_dssp ESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEE
T ss_pred cccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEE
Confidence 0 0 0 9999999999999988456689999999999999999999999999999999
Q ss_pred EecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeec
Q 016518 266 TINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (388)
Q Consensus 266 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~ 302 (388)
.|||.+|||+.+... ...|||+++|+|+|+|++|++
T Consensus 320 ~ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 320 TIPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EEChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 999999999987533 467999999999999999975
No 3
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=3.6e-43 Score=327.05 Aligned_cols=227 Identities=37% Similarity=0.625 Sum_probs=204.9
Q ss_pred ecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEE
Q 016518 43 LGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTF 122 (388)
Q Consensus 43 ~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~ 122 (388)
.+++|++|+++++|+|..+|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 48 ~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v-- 125 (280)
T 1q1c_A 48 KQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHI-- 125 (280)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEE--
T ss_pred CCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEE--
Confidence 479999999999999955599999999999999999999999998778999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCCC-CCCCCCcEEEEEEEccceeecccC--cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCccee
Q 016518 123 TLPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMV 199 (388)
Q Consensus 123 ~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~~~~dv~--~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v 199 (388)
.|||+++||..+.+ .||++++++|+|+|+++.. .++. .|+++.++++++|+|+..|..++.|+++|
T Consensus 126 ~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y---------- 194 (280)
T 1q1c_A 126 TCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVAL---------- 194 (280)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEE----------
T ss_pred EECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceEEEEE----------
Confidence 99999999999876 8999999999999999875 4666 88999999999999998899999998764
Q ss_pred ecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEEccCCc---ccchHHHHHccccCCcEEEEEecCCCCCCCc
Q 016518 200 AKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQ---VIAGLDRVAATMKKEEWAIVTINHEYGFGNV 276 (388)
Q Consensus 200 ~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~---v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~ 276 (388)
+|++ ||++||++ |+.|.||.++ +++||+.+|.+|++||++.|.|||+++||+.
T Consensus 195 -----------------~g~~-dG~~fd~~------~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~ 250 (280)
T 1q1c_A 195 -----------------EGYY-KDKLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSV 250 (280)
T ss_dssp -----------------EEEE-TTEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTT
T ss_pred -----------------EEEe-CCEEEecC------CeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcC
Confidence 4555 67888875 8999999987 5999999999999999999999999999998
Q ss_pred ccccCCCCCCCCCeEEEEEEEeeeecCcCccc
Q 016518 277 EAKRDLATIPSCAKLYYEVEMMDFIKEKVPWE 308 (388)
Q Consensus 277 ~~~~~~~~ip~~~~l~f~veL~~~~~~~~~~~ 308 (388)
+.+. ..|||+++|+|+|+|++|+..++.|.
T Consensus 251 ~~~~--~~IP~~~~l~f~V~L~~i~~~~~~W~ 280 (280)
T 1q1c_A 251 GKEK--FQIPPNAELKYELHLKSFEKAKESWE 280 (280)
T ss_dssp CBGG--GTBCTTCCEEEEEEEEEEECCCC---
T ss_pred CCcc--CccCCCCeEEEEEEEEEEeCCCCCCC
Confidence 8621 36999999999999999999999884
No 4
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.96 E-value=2.5e-28 Score=234.30 Aligned_cols=196 Identities=31% Similarity=0.514 Sum_probs=168.6
Q ss_pred CccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeec-CceEEeecCCCCCCCeEEE
Q 016518 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYDGEQPLEFI 240 (388)
Q Consensus 162 d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~-dg~~fd~s~~~~~~p~~f~ 240 (388)
+.++.++++++|.|. .|..++.|+|| |+|++. +|++||++ +.++.|++|.
T Consensus 48 ~~~~~~~~~~~g~g~-~~~~gd~v~v~---------------------------y~g~~~~~g~~fd~~-~~~~~~~~~~ 98 (338)
T 2if4_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLH---------------------------YRAWTKNSQHKFEDT-WHEQQPIELV 98 (338)
T ss_dssp ETTEEEEEEECCBSC-CCCTTCEEEEE---------------------------EEEEETTTCCCCEEH-HHHTCCEEEE
T ss_pred CCCeEEEEEeCCCCC-CCCCCCEEEEE---------------------------EEEEEcCCCcEeecc-cCCCCCeEEE
Confidence 457899999999998 78899999876 555554 48899998 6778899999
Q ss_pred ccCC-cccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeecCc---CccccCchhHHH
Q 016518 241 TDEE-QVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEK---VPWEMNNQGKIE 316 (388)
Q Consensus 241 lG~~-~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~~---~~~~l~~~e~~~ 316 (388)
+|.+ ++++||+.+|.+|++||++.|.|||.++||..+... ++.||++++++|+|+|+++.... ..|.++.++++.
T Consensus 99 lg~~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~ 177 (338)
T 2if4_A 99 LGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIG 177 (338)
T ss_dssp TTSCCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHH
T ss_pred cCCCCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHH
Confidence 9999 899999999999999999999999999999988632 36799999999999999998754 478899999999
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCC--CCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG--SFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~--~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..++..|+.+|+.|+|..|+..|++|+.+.+... .......+....++..+|+|+|.||+++++|.+|+
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~ 250 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAI 250 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999875421 11223334556777889999999999999999986
No 5
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.94 E-value=1.2e-25 Score=215.35 Aligned_cols=197 Identities=33% Similarity=0.559 Sum_probs=176.6
Q ss_pred eecccCcCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCC
Q 016518 155 TVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGE 234 (388)
Q Consensus 155 ~~~dv~~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~ 234 (388)
...+++.|+++.++++++|+|...|..++.|+|+ |+|++ +|++||++
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~---------------------------y~g~~-~g~~fd~~----- 63 (336)
T 1p5q_A 17 RGSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVA---------------------------LEGYY-KDKLFDQR----- 63 (336)
T ss_dssp -----CCTTSEEEEEEECCCCSCCCCTTCEEEEE---------------------------EEEEE-TTEEEEEE-----
T ss_pred cceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEE---------------------------EEEEE-CCEEEecC-----
Confidence 3567789999999999999999889999988865 55666 78899987
Q ss_pred CCeEEEccCCc---ccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeecCcCccccCc
Q 016518 235 QPLEFITDEEQ---VIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNN 311 (388)
Q Consensus 235 ~p~~f~lG~~~---v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~~~~~~l~~ 311 (388)
|++|.+|.|. ++++|+.||..|+.||++.|.++|.++||..|... ..||+++++.|+++|.+++.....|.+..
T Consensus 64 -~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~ 140 (336)
T 1p5q_A 64 -ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNS 140 (336)
T ss_dssp -EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCH
T ss_pred -CeEEEeCCCCccccchHHHHHHhcCCCCCeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCH
Confidence 8999999886 58999999999999999999999999999998731 36999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 312 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.....+..++..|+.+|+.|+|.+|+..|++|+.+.+.......+...++..++..+|+|+|.||+++++|++|+
T Consensus 141 ~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 216 (336)
T 1p5q_A 141 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAI 216 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999999999999999999999998877667777888889999999999999999999999987
No 6
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.91 E-value=8.2e-25 Score=183.51 Aligned_cols=117 Identities=38% Similarity=0.642 Sum_probs=108.8
Q ss_pred cCCCce-eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhccccc
Q 016518 36 KVGEER-GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKK 114 (388)
Q Consensus 36 ~~~~~~-~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~ 114 (388)
..++++ ..+++|++|+++++|+|...|..||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++
T Consensus 24 ~~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~ 103 (144)
T 3o5e_A 24 EQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKK 103 (144)
T ss_dssp HHCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCB
T ss_pred cccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCC
Confidence 345555 5579999999999999965899999999999999999999999998889999999999999999999999999
Q ss_pred CceEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccce
Q 016518 115 RECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (388)
Q Consensus 115 Ge~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~ 154 (388)
|++++| .|||+++||..+.+ .||++++|+|+|+|+++.
T Consensus 104 Ge~~~v--~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 104 GEICHL--LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp TCEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEE--EEChHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 999999 99999999999987 999999999999999875
No 7
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.91 E-value=2.1e-24 Score=179.11 Aligned_cols=121 Identities=44% Similarity=0.746 Sum_probs=104.5
Q ss_pred cCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEE
Q 016518 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFT 123 (388)
Q Consensus 44 ~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~ 123 (388)
+++|++|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++| .
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v--~ 89 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEF--T 89 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEE--E
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEE--E
Confidence 78999999999999955799999999999999999999999987668999999999999999999999999999999 9
Q ss_pred cCCCCCCCCCCCC-CCCCCCcEEEEEEEccceeecccC--cCcccee
Q 016518 124 LPSELRFGVEGRD-SLPPNSVVQFEVELVSWITVVDLS--KDGGIVK 167 (388)
Q Consensus 124 vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~~~~dv~--~d~~v~k 167 (388)
|||+++||..+.+ .||++++++|+|+|+++... ++. .|++++|
T Consensus 90 ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~-~l~~~~d~~v~k 135 (135)
T 1r9h_A 90 IRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE-DISPDRDGTILR 135 (135)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC--------------
T ss_pred EChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC-CcCcCCCCcccC
Confidence 9999999999876 89999999999999998754 666 6777654
No 8
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.91 E-value=1e-23 Score=203.17 Aligned_cols=153 Identities=35% Similarity=0.587 Sum_probs=144.5
Q ss_pred cCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEE
Q 016518 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFT 123 (388)
Q Consensus 44 ~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~ 123 (388)
.+.++.++++++|.|+.+|..||.|++||++++.||++|+++ .++.|.+|.+++++||+.+|.+|++||+++| +
T Consensus 125 ~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~----~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~--~ 198 (356)
T 3jxv_A 125 KDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKS----EGVEFTVKDGHLCPALAKAVKTMKKGEKVLL--A 198 (356)
T ss_dssp SSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEE----EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEE--E
T ss_pred cCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEecc----CCEEEEeCCCCcchHHHHHHhhCCCCCEEEE--E
Confidence 578999999999999899999999999999999999999988 4799999999999999999999999999999 9
Q ss_pred cCCCCCCCCCCCC------CCCCCCcEEEEEEEccceeecccCcCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcc
Q 016518 124 LPSELRFGVEGRD------SLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGT 197 (388)
Q Consensus 124 vp~~~~yg~~~~~------~ip~~~~l~~~i~l~~~~~~~dv~~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~ 197 (388)
|||+++||..|.+ .||++++|.|+|+|+++....++..|.++.++++++|+++..|..++.|++||..++.+++
T Consensus 199 v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~ 278 (356)
T 3jxv_A 199 VKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGT 278 (356)
T ss_dssp ECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSC
T ss_pred EChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCC
Confidence 9999999999876 4999999999999999999999999999999999999999999999999999999998888
Q ss_pred eeecC
Q 016518 198 MVAKT 202 (388)
Q Consensus 198 ~v~~~ 202 (388)
+..++
T Consensus 279 ~fd~~ 283 (356)
T 3jxv_A 279 VFLKK 283 (356)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 76544
No 9
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.91 E-value=2.8e-24 Score=176.82 Aligned_cols=115 Identities=38% Similarity=0.654 Sum_probs=107.4
Q ss_pred CCce-eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCc
Q 016518 38 GEER-GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (388)
Q Consensus 38 ~~~~-~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 116 (388)
++++ ..+++|++|+++++|+|...|+.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|+
T Consensus 10 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge 89 (128)
T 3o5q_A 10 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGE 89 (128)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred cceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCC
Confidence 4555 568999999999999995579999999999999999999999998777899999999999999999999999999
Q ss_pred eEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccce
Q 016518 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (388)
Q Consensus 117 ~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~ 154 (388)
+++| .|||+++||..+.+ .||++++|+|+|+|+++.
T Consensus 90 ~~~v--~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 90 ICHL--LCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp EEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEE--EEChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 9999 99999999999987 899999999999999875
No 10
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.91 E-value=5.9e-24 Score=172.78 Aligned_cols=108 Identities=41% Similarity=0.671 Sum_probs=101.6
Q ss_pred cCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCC-------CCCeEEeeCCCcccccHHHHhcccccCc
Q 016518 44 GNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDR-------YDPLTFKLGTGQVATGLDNGIITMKKRE 116 (388)
Q Consensus 44 ~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~-------~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 116 (388)
.|+|++|+++++|+|...|+.||.|+|||++++.||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 489999999999999667999999999999999999999999863 4899999999999999999999999999
Q ss_pred eEEEEEEcCCCCCCCCCCCC--CCCCCCcEEEEEEEccc
Q 016518 117 CAVFTFTLPSELRFGVEGRD--SLPPNSVVQFEVELVSW 153 (388)
Q Consensus 117 ~~~v~~~vp~~~~yg~~~~~--~ip~~~~l~~~i~l~~~ 153 (388)
+++| .|||+++||..+.+ .||++++|+|+|+|+++
T Consensus 82 ~~~v--~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARL--EIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEE--EECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEE--EECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999 99999999999986 79999999999999875
No 11
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.91 E-value=8.5e-24 Score=170.20 Aligned_cols=110 Identities=39% Similarity=0.605 Sum_probs=102.8
Q ss_pred eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEE
Q 016518 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFT 121 (388)
Q Consensus 42 ~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~ 121 (388)
..+++|++|+++++|+|...|+.||.|++||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v- 80 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARL- 80 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEE-
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEE-
Confidence 3568999999999999943399999999999999999999999998778999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccc
Q 016518 122 FTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (388)
Q Consensus 122 ~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~ 153 (388)
.|||+++||..+.+ .||++++++|+|+|+++
T Consensus 81 -~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 81 -TIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp -EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred -EECHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999999999876 79999999999999876
No 12
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.90 E-value=2e-23 Score=172.46 Aligned_cols=110 Identities=40% Similarity=0.688 Sum_probs=104.5
Q ss_pred eeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEE
Q 016518 41 RGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (388)
Q Consensus 41 ~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v 120 (388)
+..+++|++|+++++|+| ..|+.||.|+|||++++.||++|+++++++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 23 ~~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 23 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp CEECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred cEECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 477899999999999999 8999999999999999999999999998779999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccc
Q 016518 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (388)
Q Consensus 121 ~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~ 153 (388)
.|||+++||..+.+ .|||+++++|+|+|+++
T Consensus 102 --~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 --TIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred --EECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 99999999999987 79999999999999864
No 13
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=2.9e-23 Score=180.30 Aligned_cols=124 Identities=27% Similarity=0.439 Sum_probs=113.5
Q ss_pred CCCCccCCCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeEEeeCCC-cccccHHHH
Q 016518 31 SAAPLKVGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTG-QVATGLDNG 108 (388)
Q Consensus 31 ~~~~~~~~~~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~-dg~~~~ss~~~~~p~~~~lg~~-~~~~g~~~~ 108 (388)
++.+.+.++++.++++|++|+++++|+| ..|..||.|+|||++++. ||++|++|+.++.|+.|.||.+ ++++||+++
T Consensus 34 ~~~p~~~~~~~~~~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eea 112 (180)
T 2f4e_A 34 GNVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIG 112 (180)
T ss_dssp CCSCCCCCSCCEEEETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHH
T ss_pred ccCCcccCCCcEECCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHH
Confidence 4455567778888899999999999999 799999999999999998 6999999998779999999999 999999999
Q ss_pred hcccccCceEEEEEEcCCCCCCCCCCC---CCCCCCCcEEEEEEEccceeec
Q 016518 109 IITMKKRECAVFTFTLPSELRFGVEGR---DSLPPNSVVQFEVELVSWITVV 157 (388)
Q Consensus 109 l~~m~~Ge~~~v~~~vp~~~~yg~~~~---~~ip~~~~l~~~i~l~~~~~~~ 157 (388)
|.+|++|++++| .|||+++||..+. +.||++++|+|+|+|+++....
T Consensus 113 L~gMk~Ge~~~v--~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~ 162 (180)
T 2f4e_A 113 VASMKSGERALV--HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETK 162 (180)
T ss_dssp HTTCCBTCEEEE--EECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBC
T ss_pred HhCCCCCCEEEE--EECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCc
Confidence 999999999999 9999999999986 4899999999999999987543
No 14
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.90 E-value=2.2e-23 Score=170.86 Aligned_cols=113 Identities=28% Similarity=0.476 Sum_probs=105.2
Q ss_pred eeecCCCeEEEEEEccCC-CCCCCCCCEEEEEEEEEEc-CCcEEecccC--CCCCeEEeeCCCcccccHHHHhcccccCc
Q 016518 41 RGLGNSGIKKKLLKNGVD-WDTPEFGDEVTIHYVGTLL-DGTKFDSTRD--RYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (388)
Q Consensus 41 ~~~~~~g~~~~il~~G~g-~~~~~~gd~V~v~y~~~~~-dg~~~~ss~~--~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 116 (388)
+.++++|++|+++++|++ +..|+.||.|+|||++++. ||++|++|+. .+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 7 ~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 86 (125)
T 4dip_A 7 ALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGE 86 (125)
T ss_dssp GGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTC
T ss_pred eEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCC
Confidence 467899999999999982 3899999999999999998 9999999984 45899999999999999999999999999
Q ss_pred eEEEEEEcCCCCCCCCCCCCCCCCCCcEEEEEEEcccee
Q 016518 117 CAVFTFTLPSELRFGVEGRDSLPPNSVVQFEVELVSWIT 155 (388)
Q Consensus 117 ~~~v~~~vp~~~~yg~~~~~~ip~~~~l~~~i~l~~~~~ 155 (388)
+++| .|||+++||..+.+.||++++|+|+|+|+++..
T Consensus 87 ~~~~--~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 87 KRKL--IIPPALGYGKEGKGKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp EEEE--EECGGGTTTTTCBTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEE--EEChHHhcCCCCCCCCCCCCeEEEEEEEEEEEc
Confidence 9999 999999999999889999999999999998864
No 15
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.90 E-value=4.5e-24 Score=181.11 Aligned_cols=114 Identities=21% Similarity=0.262 Sum_probs=98.5
Q ss_pred eecCCCeEEEEEEccCCCCC--CCCCCEEEEEEEEEEcC--CcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCce
Q 016518 42 GLGNSGIKKKLLKNGVDWDT--PEFGDEVTIHYVGTLLD--GTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (388)
Q Consensus 42 ~~~~~g~~~~il~~G~g~~~--~~~gd~V~v~y~~~~~d--g~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~ 117 (388)
.++++||+|+|+++|+| .. +++||.|+|||++++.| |++||||+++++|+.|.||.+++|+||+++|.+|++|++
T Consensus 6 ~~~~~Gv~~~vl~~G~G-~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~ 84 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRG-ELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEI 84 (165)
T ss_dssp HHHTTSCCCCEEECCSS-CCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCE
T ss_pred cccCCCeEEEEEECCcC-CCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCce
Confidence 57899999999999999 44 46899999999999864 999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCCCCCCC---------CCCC-----------------------------CCCCCcEEEEEEEccceeecc
Q 016518 118 AVFTFTLPSELRFGVE---------GRDS-----------------------------LPPNSVVQFEVELVSWITVVD 158 (388)
Q Consensus 118 ~~v~~~vp~~~~yg~~---------~~~~-----------------------------ip~~~~l~~~i~l~~~~~~~d 158 (388)
++| +|||++|||.. .... +++.++|+|+|+|+++..+.+
T Consensus 85 ~~~--~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 85 AQF--LCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EEE--ECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred EEE--EECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 999 99999999921 0001 233467999999999976544
No 16
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.90 E-value=2.4e-23 Score=165.92 Aligned_cols=105 Identities=33% Similarity=0.668 Sum_probs=98.8
Q ss_pred CeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCC
Q 016518 47 GIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPS 126 (388)
Q Consensus 47 g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~ 126 (388)
|++|+++++|+|...|+.||.|++||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++| .+||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~--~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKL--TISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEE--EECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEE--EECH
Confidence 78999999999944499999999999999999999999987668999999999999999999999999999999 9999
Q ss_pred CCCCCCCCCC-CCCCCCcEEEEEEEccc
Q 016518 127 ELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (388)
Q Consensus 127 ~~~yg~~~~~-~ip~~~~l~~~i~l~~~ 153 (388)
+++||..+.+ .||++++++|+|+|+++
T Consensus 79 ~~ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 79 DYAYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred HHccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 9999999876 89999999999999875
No 17
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.89 E-value=7.9e-23 Score=177.53 Aligned_cols=128 Identities=29% Similarity=0.492 Sum_probs=100.7
Q ss_pred CccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeec-CceEEeecCCCCCCCeEEE
Q 016518 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYDGEQPLEFI 240 (388)
Q Consensus 162 d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~-dg~~fd~s~~~~~~p~~f~ 240 (388)
+.++.++++++|.|. .|..++.|++| |++++. +|++||++ +.++.|+.|.
T Consensus 48 ~~gl~~~vl~~G~G~-~~~~Gd~V~v~---------------------------Y~g~l~~dG~~fdss-~~~~~p~~f~ 98 (180)
T 2f4e_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLH---------------------------YRAWTKNSQHKFEDT-WHEQQPIELV 98 (180)
T ss_dssp ETTEEEEEEECCBSC-CBCTTCEEEEE---------------------------EEEEETTTCCEEEET-TTTTCCEEEE
T ss_pred CCceEEEEEeCCCCC-CCCCCCEEEEE---------------------------EEEEECCCCcEEecc-CccCCCEEEE
Confidence 356899999999997 78889988876 555554 58999999 7778999999
Q ss_pred ccCC-cccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeecCcC---ccccCchhHHH
Q 016518 241 TDEE-QVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKV---PWEMNNQGKIE 316 (388)
Q Consensus 241 lG~~-~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~~~---~~~l~~~e~~~ 316 (388)
||.+ ++++||+.+|.+|++||++.|.|||.++||..+.+. ++.|||+++|+|+|+|++|...++ .|+|+.+||++
T Consensus 99 lG~g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~ 177 (180)
T 2f4e_A 99 LGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIG 177 (180)
T ss_dssp TTSCCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC-------------
T ss_pred eCCCCchhHHHHHHHhCCCCCCEEEEEECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHh
Confidence 9999 999999999999999999999999999999988632 367999999999999999999887 89999999998
Q ss_pred HHH
Q 016518 317 AAG 319 (388)
Q Consensus 317 ~a~ 319 (388)
.|.
T Consensus 178 ~A~ 180 (180)
T 2f4e_A 178 AAD 180 (180)
T ss_dssp ---
T ss_pred hcC
Confidence 874
No 18
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.89 E-value=4.4e-23 Score=169.84 Aligned_cols=110 Identities=40% Similarity=0.725 Sum_probs=102.6
Q ss_pred eecCCCeEEE--EEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEE
Q 016518 42 GLGNSGIKKK--LLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAV 119 (388)
Q Consensus 42 ~~~~~g~~~~--il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~ 119 (388)
..+++|++|+ ++++|+|...|+.||.|+|||++++.||++|++++.++.|+.|.+|.+++++||+++|.+|++|++++
T Consensus 18 ~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 18 GPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred eeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 5679999999 99999994349999999999999988999999999877899999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccc
Q 016518 120 FTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (388)
Q Consensus 120 v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~ 153 (388)
| .|||+++||..+.+ .||++++++|+|+|+++
T Consensus 98 v--~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 98 F--TIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp E--EECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred E--EECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9 99999999999876 79999999999999864
No 19
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.89 E-value=1.2e-22 Score=170.34 Aligned_cols=117 Identities=34% Similarity=0.554 Sum_probs=105.9
Q ss_pred eecccC--cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCC
Q 016518 155 TVVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYD 232 (388)
Q Consensus 155 ~~~dv~--~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~ 232 (388)
...|++ .|+++.++++++|+|...|..++.|++| |++++.||++||++ +.
T Consensus 25 ~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~ 76 (144)
T 3o5e_A 25 QGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVH---------------------------YKGKLSNGKKFDSS-HD 76 (144)
T ss_dssp HCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEE---------------------------EEEECTTSCEEEES-GG
T ss_pred ccccccccCCCeEEEEEEECCCCCccCCCCCEEEEE---------------------------EEEEECCCCEEEee-cc
Confidence 356777 7899999999999998889999999876 55666688999998 77
Q ss_pred CCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeec
Q 016518 233 GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (388)
Q Consensus 233 ~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~ 302 (388)
++.|+.|.+|.+++++||+.+|.+|++||+++|.|||.+|||+.+. ++.|||+++|+|+|+|++|+.
T Consensus 77 ~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~---~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 77 RNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGS---LPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp GTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEEC
T ss_pred cCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCC---CCCcCCCCeEEEEEEEEEecC
Confidence 7899999999999999999999999999999999999999999998 578999999999999999863
No 20
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.89 E-value=3.7e-23 Score=176.96 Aligned_cols=113 Identities=32% Similarity=0.551 Sum_probs=105.4
Q ss_pred CCceeecCCCeEEEEEEccCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCc
Q 016518 38 GEERGLGNSGIKKKLLKNGVDWDT-PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (388)
Q Consensus 38 ~~~~~~~~~g~~~~il~~G~g~~~-~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 116 (388)
.+.+.++++|++|+++++|+| .. |..||.|+|||++++.||++|++|+.++.|+.|.+| ++|+||+++|.+|++|+
T Consensus 29 ~~~~~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge 105 (167)
T 1jvw_A 29 QPDAVKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGD 105 (167)
T ss_dssp STTEEECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTC
T ss_pred CCCcEECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCC
Confidence 345678899999999999999 56 999999999999999999999999877789999995 99999999999999999
Q ss_pred eEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEcccee
Q 016518 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWIT 155 (388)
Q Consensus 117 ~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~~ 155 (388)
+++| .|||+++||..+.+ .||||++|+|+|+|+++..
T Consensus 106 ~~~~--~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~ 143 (167)
T 1jvw_A 106 RWRL--FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKD 143 (167)
T ss_dssp EEEE--EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGG
T ss_pred EEEE--EECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEc
Confidence 9999 99999999999977 8999999999999999864
No 21
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.89 E-value=9.5e-23 Score=167.94 Aligned_cols=116 Identities=41% Similarity=0.605 Sum_probs=102.7
Q ss_pred CCceeecCCCeE-EEEEEcc-CC-CCCCCCCCEEEEEEEEEE-cCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccc
Q 016518 38 GEERGLGNSGIK-KKLLKNG-VD-WDTPEFGDEVTIHYVGTL-LDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMK 113 (388)
Q Consensus 38 ~~~~~~~~~g~~-~~il~~G-~g-~~~~~~gd~V~v~y~~~~-~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~ 113 (388)
.+++.++++|+. |+++++| .| +..|+.||.|+|||++++ .||++|++++.++.|+.|.+|.+++++||+++|.+|+
T Consensus 7 ~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~ 86 (129)
T 2vn1_A 7 FEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMR 86 (129)
T ss_dssp CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCC
T ss_pred cCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCC
Confidence 345555666654 5799977 44 388999999999999999 7999999999777899999999999999999999999
Q ss_pred cCceEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEcccee
Q 016518 114 KRECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWIT 155 (388)
Q Consensus 114 ~Ge~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~~ 155 (388)
+|++++| .|||+++||..+.+ .||++++++|+|+|+++..
T Consensus 87 ~Ge~~~v--~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 87 KNEKCLV--RIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TTCEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCEEEE--EEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 9999999 99999999999876 7999999999999998764
No 22
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.89 E-value=2.2e-23 Score=172.70 Aligned_cols=110 Identities=30% Similarity=0.522 Sum_probs=96.6
Q ss_pred eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEE
Q 016518 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVF 120 (388)
Q Consensus 42 ~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~-dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v 120 (388)
.++++|++|+++++|+| ..+..||.|+|||++++. +|++|++++.++.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 22 v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v 100 (134)
T 3b7x_A 22 ISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARF 100 (134)
T ss_dssp SSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEE
T ss_pred eeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEE
Confidence 55899999999999999 688999999999999988 6999999987778999999999999999999999999999999
Q ss_pred EEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccce
Q 016518 121 TFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (388)
Q Consensus 121 ~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~ 154 (388)
.|||+++||..+.+ .||++++|+|+|+|+++.
T Consensus 101 --~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 101 --LFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp --EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred --EECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 99999999999877 799999999999998874
No 23
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.89 E-value=1.4e-22 Score=180.14 Aligned_cols=111 Identities=40% Similarity=0.680 Sum_probs=105.3
Q ss_pred ceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEE
Q 016518 40 ERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAV 119 (388)
Q Consensus 40 ~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~ 119 (388)
.+.++++|++|+++++|+| ..|..||.|++||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++
T Consensus 98 t~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~ 176 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRR 176 (209)
T ss_dssp CCEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEE
T ss_pred cccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEE
Confidence 3567899999999999999 789999999999999999999999999888999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccc
Q 016518 120 FTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSW 153 (388)
Q Consensus 120 v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~ 153 (388)
| .|||++|||..+.+ .||++++|+|+|+|+++
T Consensus 177 v--~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 177 L--TIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp E--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred E--EECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9 99999999999987 69999999999999864
No 24
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.89 E-value=1.3e-22 Score=164.46 Aligned_cols=111 Identities=31% Similarity=0.439 Sum_probs=101.9
Q ss_pred CCceeecCCC-eEEEEEEccCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccC
Q 016518 38 GEERGLGNSG-IKKKLLKNGVDW-DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKR 115 (388)
Q Consensus 38 ~~~~~~~~~g-~~~~il~~G~g~-~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G 115 (388)
.+|+.++++| ++|+++++|+|. ..|+.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|
T Consensus 4 ~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~G 79 (118)
T 2awg_A 4 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVG 79 (118)
T ss_dssp TCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTT
T ss_pred ccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCC
Confidence 4667667777 999999999993 38999999999999998899999984 79999999999999999999999999
Q ss_pred ceEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccce
Q 016518 116 ECAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (388)
Q Consensus 116 e~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~ 154 (388)
++++| .|||+++||..+.+ .||++++++|+|+|+++.
T Consensus 80 e~~~~--~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 80 ETAMV--TADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CEEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CEEEE--EEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 99999 99999999999876 899999999999998874
No 25
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.88 E-value=8.1e-23 Score=181.30 Aligned_cols=110 Identities=27% Similarity=0.438 Sum_probs=103.1
Q ss_pred CCCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCc
Q 016518 37 VGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRE 116 (388)
Q Consensus 37 ~~~~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge 116 (388)
..+.+.++++|++|+++++|+| ..|..||.|+|||++++.||++|++| +.|+.|.+| ++|+||+++|.+|++|+
T Consensus 108 ~~~gv~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Ge 181 (219)
T 3oe2_A 108 AKPGVKELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGA 181 (219)
T ss_dssp TSTTCEECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTC
T ss_pred cCCCcEECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCC
Confidence 3445678899999999999999 79999999999999999999999999 589999998 89999999999999999
Q ss_pred eEEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccce
Q 016518 117 CAVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (388)
Q Consensus 117 ~~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~ 154 (388)
+++| +|||+++||..|.+ .|||+++|+|+|+|+++.
T Consensus 182 k~~v--~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 182 KWRL--VIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EEEE--EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEE--EECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 9999 99999999999988 699999999999999875
No 26
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.88 E-value=2.8e-22 Score=169.58 Aligned_cols=113 Identities=30% Similarity=0.436 Sum_probs=102.8
Q ss_pred CCceeecCCCe-EEEEEEccCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccC
Q 016518 38 GEERGLGNSGI-KKKLLKNGVDW-DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKR 115 (388)
Q Consensus 38 ~~~~~~~~~g~-~~~il~~G~g~-~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~G 115 (388)
.++..++++|+ +|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+|++|
T Consensus 34 ~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~G 109 (157)
T 2jwx_A 34 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVG 109 (157)
T ss_dssp CSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTT
T ss_pred cccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCC
Confidence 44556778886 89999999992 38999999999999999999999984 79999999999999999999999999
Q ss_pred ceEEEEEEcCCCCCCCCCC-CC-CCCCCCcEEEEEEEccceee
Q 016518 116 ECAVFTFTLPSELRFGVEG-RD-SLPPNSVVQFEVELVSWITV 156 (388)
Q Consensus 116 e~~~v~~~vp~~~~yg~~~-~~-~ip~~~~l~~~i~l~~~~~~ 156 (388)
++++| .|||+++||..+ .+ .||++++|+|+|+|+++...
T Consensus 110 e~~~v--~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 110 ETAMV--TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp CEEEE--EECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred CEEEE--EECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence 99999 999999999999 55 89999999999999988653
No 27
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.88 E-value=1.6e-22 Score=179.52 Aligned_cols=112 Identities=30% Similarity=0.464 Sum_probs=105.4
Q ss_pred CCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCce
Q 016518 38 GEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (388)
Q Consensus 38 ~~~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~ 117 (388)
.+.+.++++|++|+++++|+| ..|..||.|+|||++++.||++|++|+.++.|+.|.+| ++|+||+++|.+|++|++
T Consensus 98 ~~~v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek 174 (213)
T 1fd9_A 98 KPGVVVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGST 174 (213)
T ss_dssp STTEEECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCE
T ss_pred cCCcEECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCE
Confidence 455788999999999999999 89999999999999999999999999987789999995 899999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCC-CCCCCCcEEEEEEEccce
Q 016518 118 AVFTFTLPSELRFGVEGRD-SLPPNSVVQFEVELVSWI 154 (388)
Q Consensus 118 ~~v~~~vp~~~~yg~~~~~-~ip~~~~l~~~i~l~~~~ 154 (388)
++| .|||+++||..+.+ .|||+++|+|+|+|+++.
T Consensus 175 ~~v--~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~ 210 (213)
T 1fd9_A 175 WEI--YVPSGLAYGPRSVGGPIGPNETLIFKIHLISVK 210 (213)
T ss_dssp EEE--EECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEE
T ss_pred EEE--EECchhccCccCCCCCCCCCCeEEEEEEEEEEE
Confidence 999 99999999999976 899999999999999875
No 28
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=1.4e-22 Score=168.15 Aligned_cols=119 Identities=29% Similarity=0.393 Sum_probs=106.6
Q ss_pred CccCCCceeecCCC-eEEEEEEccCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcc
Q 016518 34 PLKVGEERGLGNSG-IKKKLLKNGVDW-DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIIT 111 (388)
Q Consensus 34 ~~~~~~~~~~~~~g-~~~~il~~G~g~-~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~ 111 (388)
.....+++.++++| ++|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+++|.+
T Consensus 4 ~~~~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~g 79 (135)
T 2d9f_A 4 GSSGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPL 79 (135)
T ss_dssp SCCCSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGG
T ss_pred CCCcccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhC
Confidence 34566778777777 999999999992 38999999999999999999999973 7999999999999999999999
Q ss_pred cccCceEEEEEEcCCCCCCCCCC-CC-CCCCCCcEEEEEEEccceeecc
Q 016518 112 MKKRECAVFTFTLPSELRFGVEG-RD-SLPPNSVVQFEVELVSWITVVD 158 (388)
Q Consensus 112 m~~Ge~~~v~~~vp~~~~yg~~~-~~-~ip~~~~l~~~i~l~~~~~~~d 158 (388)
|++|++++| .|||+++||..+ .+ .||++++++|+|+|+++....+
T Consensus 80 m~~Ge~~~v--~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 80 MDVGETAMV--TADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp SCTTCEEEE--EECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCS
T ss_pred CCCCCEEEE--EEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCc
Confidence 999999999 999999999998 55 8999999999999999876544
No 29
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.88 E-value=6.3e-23 Score=168.95 Aligned_cols=111 Identities=34% Similarity=0.565 Sum_probs=103.5
Q ss_pred ceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcc------cc
Q 016518 40 ERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIIT------MK 113 (388)
Q Consensus 40 ~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~------m~ 113 (388)
.+..+++|++|+++++|+| ..++.||.|+|||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+ |+
T Consensus 6 ~~~~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~ 84 (129)
T 1u79_A 6 EFSVSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPML 84 (129)
T ss_dssp CCEECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCB
T ss_pred ccEECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccC
Confidence 3477899999999999999 7899999999999999989999999987668999999999999999999998 99
Q ss_pred cCceEEEEEEcCCCCCCCCCCC------CCCCCCCcEEEEEEEccc
Q 016518 114 KRECAVFTFTLPSELRFGVEGR------DSLPPNSVVQFEVELVSW 153 (388)
Q Consensus 114 ~Ge~~~v~~~vp~~~~yg~~~~------~~ip~~~~l~~~i~l~~~ 153 (388)
+|++++| .|||+++||..+. +.||++++++|+|+|+++
T Consensus 85 ~Ge~~~v--~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 85 TGGKRTL--RIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TTCEEEE--EECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCCEEEE--EEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999 9999999999985 279999999999999875
No 30
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.88 E-value=3.7e-22 Score=164.12 Aligned_cols=116 Identities=34% Similarity=0.559 Sum_probs=104.3
Q ss_pred ecccC--cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC
Q 016518 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (388)
Q Consensus 156 ~~dv~--~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~ 233 (388)
..|++ .|+++.++++++|+|...|..++.|++| |++++.||++||++ +.+
T Consensus 10 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~~ 61 (128)
T 3o5q_A 10 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVH---------------------------YKGKLSNGKKFDSS-HDR 61 (128)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEE---------------------------EEEEETTSCEEEEH-HHH
T ss_pred cceecccCCCCEEEEEEECCCCCccCCCCCEEEEE---------------------------EEEEECCCCEEEec-CCC
Confidence 34555 7889999999999998889999999876 55666688999998 677
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeec
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~ 302 (388)
+.|+.|.+|.+++++||+.+|.+|++||+++|.|||.+|||+.+. ++.|||+++|+|+|+|++|..
T Consensus 62 ~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~---~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 62 NEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGS---LPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp TSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCC---CCCcCCCCEEEEEEEEEEecC
Confidence 889999999999999999999999999999999999999999988 578999999999999999864
No 31
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.88 E-value=3.9e-22 Score=178.26 Aligned_cols=111 Identities=32% Similarity=0.628 Sum_probs=104.4
Q ss_pred CCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCce
Q 016518 38 GEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKREC 117 (388)
Q Consensus 38 ~~~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~ 117 (388)
.+.+.++++|++|+++++|+| ..|..||.|+|||++++.||++|++|+.++.|+.|.+| ++|+||+++|.+|++|++
T Consensus 113 ~~~v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek 189 (224)
T 1q6h_A 113 EKGVKTSSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGK 189 (224)
T ss_dssp STTEEECTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCE
T ss_pred CCCeEECCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCE
Confidence 355677899999999999999 79999999999999999999999999988899999995 899999999999999999
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCCCCcEEEEEEEccc
Q 016518 118 AVFTFTLPSELRFGVEGRDSLPPNSVVQFEVELVSW 153 (388)
Q Consensus 118 ~~v~~~vp~~~~yg~~~~~~ip~~~~l~~~i~l~~~ 153 (388)
++| .|||+++||..+.+.||++++++|+|+|+++
T Consensus 190 ~~v--~IP~~laYG~~g~~~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 190 IKL--VIPPELAYGKAGVPGIPPNSTLVFDVELLDV 223 (224)
T ss_dssp EEE--EECGGGTTTTTCBTTBCTTCCEEEEEEEEEE
T ss_pred EEE--EECchhhcCcCCCCCCCCCCEEEEEEEEEEe
Confidence 999 9999999999998789999999999999876
No 32
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.87 E-value=1.5e-21 Score=187.11 Aligned_cols=122 Identities=27% Similarity=0.455 Sum_probs=110.7
Q ss_pred CCCCccCCCceeecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcC-CcEEecccCCCCCeEEeeCCC-cccccHHHH
Q 016518 31 SAAPLKVGEERGLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLD-GTKFDSTRDRYDPLTFKLGTG-QVATGLDNG 108 (388)
Q Consensus 31 ~~~~~~~~~~~~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~d-g~~~~ss~~~~~p~~~~lg~~-~~~~g~~~~ 108 (388)
...++.+..++.++++|+.|+|+++|+| ..|..||.|+|||++++.+ |++|++|+.++.|+.|.+|.+ ++|+||+.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~ 112 (338)
T 2if4_A 34 GNVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIG 112 (338)
T ss_dssp -CCCCCCCSCCEEEETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHH
T ss_pred cCCCCCCCcCceeCCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHH
Confidence 4445566677788899999999999999 6999999999999999985 999999987779999999999 999999999
Q ss_pred hcccccCceEEEEEEcCCCCCCCCCCC---CCCCCCCcEEEEEEEcccee
Q 016518 109 IITMKKRECAVFTFTLPSELRFGVEGR---DSLPPNSVVQFEVELVSWIT 155 (388)
Q Consensus 109 l~~m~~Ge~~~v~~~vp~~~~yg~~~~---~~ip~~~~l~~~i~l~~~~~ 155 (388)
|.+|++||+++| +|||.++||..+. +.||+++++.|.|+|+.+..
T Consensus 113 l~~m~~Ge~~~~--~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~ 160 (338)
T 2if4_A 113 VASMKSGERALV--HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDE 160 (338)
T ss_dssp HHHCCBTCEEEE--EECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEEC
T ss_pred HhcCCCCCeEEE--EECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecC
Confidence 999999999999 9999999999997 48999999999999988754
No 33
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.87 E-value=1.8e-21 Score=157.99 Aligned_cols=109 Identities=36% Similarity=0.517 Sum_probs=96.0
Q ss_pred ccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC-------CC
Q 016518 163 GGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG-------EQ 235 (388)
Q Consensus 163 ~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~-------~~ 235 (388)
.++.++++++|++...|..++.|++| |++++.||++||++ +.. +.
T Consensus 4 ~g~~~~il~~G~g~~~p~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~~~~~~~~~~~ 55 (119)
T 3kz7_A 4 PKYTKSILKKGDKTNFPKKGDVVHCW---------------------------YTGTLPDGTVFDTN-IQTSSKKKKNAK 55 (119)
T ss_dssp CSEEEEEEECCCSSCCCCTTCEEEEE---------------------------EEEECTTSCEEEEC-CCCSSSTTTTCC
T ss_pred CccEEEEEEcCCCCCcCCCCCEEEEE---------------------------EEEEECCCCEEEec-cccccccccCCC
Confidence 46899999999998889999999876 55555678889988 442 48
Q ss_pred CeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 236 PLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 236 p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
|+.|.+|.+++++||+.+|.+|++||++.|.|||++|||+.+.+. ..|||+++|+|+|+|++|+
T Consensus 56 p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 56 PLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp CEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHhCCCCCCEEEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEeC
Confidence 999999999999999999999999999999999999999998731 4799999999999999974
No 34
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.87 E-value=1.4e-21 Score=162.07 Aligned_cols=117 Identities=36% Similarity=0.581 Sum_probs=104.4
Q ss_pred ecccC--cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC
Q 016518 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (388)
Q Consensus 156 ~~dv~--~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~ 233 (388)
+.|++ .+.++.++++++|+|+..|..++.|++| |++++.||++||++ +.+
T Consensus 5 ~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~~ 56 (135)
T 1r9h_A 5 KIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVH---------------------------YVGTLENGTKFDSS-RDR 56 (135)
T ss_dssp CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEE---------------------------EEEEETTSCEEEEH-HHH
T ss_pred ceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEE---------------------------EEEEECCCCEEEec-CcC
Confidence 55777 7889999999999998778899999876 55566688999998 556
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeecC
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKE 303 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~ 303 (388)
+.|++|.+|.+++++||+.+|.+|++||++.|.|||++|||+.+. ++.||++++|+|+|+|++|...
T Consensus 57 ~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~---~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 57 GDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGS---PPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp TSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEEC-
T ss_pred CCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCC---CCCcCcCCcEEEEEEEEEeecC
Confidence 789999999999999999999999999999999999999999987 5789999999999999999753
No 35
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.86 E-value=5.2e-21 Score=157.53 Aligned_cols=116 Identities=35% Similarity=0.696 Sum_probs=101.7
Q ss_pred ecccCcCccceeeEeecC-CC-CCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEee-cCceEEeecCCC
Q 016518 156 VVDLSKDGGIVKKILEKG-ER-DASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARL-EDGTVFEKKGYD 232 (388)
Q Consensus 156 ~~dv~~d~~v~kkil~~G-~g-~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~-~dg~~fd~s~~~ 232 (388)
..+++.++.+.++++++| .| ...|..++.|+++ |++++ .||++||++ +.
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~---------------------------Y~g~~~~dG~~fd~s-~~ 60 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPKKGNEVTVH---------------------------YVGKLESTGKVFDSS-FD 60 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEE---------------------------EEEEETTTCCEEEEG-GG
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEE---------------------------EEEEECCCCeEEEec-CC
Confidence 456778888999999988 55 3578888988876 55555 588999998 66
Q ss_pred CCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeec
Q 016518 233 GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (388)
Q Consensus 233 ~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~ 302 (388)
++.|++|.+|.+++++||+.+|.+|++||++.|.|||.+|||+.+. ++.|||+++|+|+|+|+++..
T Consensus 61 ~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~---~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 61 RNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGC---GESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TTCCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEEC
T ss_pred CCccEEEEeCCCCcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCCC---CCCcCCCCeEEEEEEEEEEec
Confidence 7789999999999999999999999999999999999999999887 567999999999999999975
No 36
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.86 E-value=1.8e-21 Score=165.13 Aligned_cols=117 Identities=16% Similarity=0.264 Sum_probs=93.2
Q ss_pred cCccceeeEeecCCCCCC-CCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEee--cCceEEeecCCCCCCCe
Q 016518 161 KDGGIVKKILEKGERDAS-PGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARL--EDGTVFEKKGYDGEQPL 237 (388)
Q Consensus 161 ~d~~v~kkil~~G~g~~~-p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~--~dg~~fd~s~~~~~~p~ 237 (388)
.+.++.++++++|+|... +..++.|++| |+|++ .||++||+| +.+++|+
T Consensus 8 ~~~Gv~~~vl~~G~G~~p~~~~G~~V~vh---------------------------Y~g~l~d~~G~~FDsS-~~rg~P~ 59 (165)
T 2lkn_A 8 REDGIQKRVIQEGRGELPDFQDGTKATFH---------------------------YRTLHSDDEGTVLDDS-RARGKPM 59 (165)
T ss_dssp HTTSCCCCEEECCSSCCCCCCTTCEEEEE---------------------------CEEECSSSSCCEEEES-TTTTCCE
T ss_pred cCCCeEEEEEECCcCCCCCCCCCCEEEEE---------------------------EEEEEeCCCccEEEec-ccCCCCE
Confidence 467899999999999743 3578888866 55555 359999999 8999999
Q ss_pred EEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCccc----cc-CCCC----------------------------
Q 016518 238 EFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA----KR-DLAT---------------------------- 284 (388)
Q Consensus 238 ~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~----~~-~~~~---------------------------- 284 (388)
+|.||.+++|+||+.+|.+|++||+++|+|||++|||.... +. ....
T Consensus 60 ~f~lG~g~vI~Gwd~gl~~M~~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~ 139 (165)
T 2lkn_A 60 ELIIGKKFKLPVWETIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDA 139 (165)
T ss_dssp EEESSSSCSCSHHHHHHTTCCTTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTH
T ss_pred EEEecCCCccHHHHHHHhcCccCceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeecccccccccccccc
Confidence 99999999999999999999999999999999999993110 00 0122
Q ss_pred -CCCCCeEEEEEEEeeeecCcC
Q 016518 285 -IPSCAKLYYEVEMMDFIKEKV 305 (388)
Q Consensus 285 -ip~~~~l~f~veL~~~~~~~~ 305 (388)
|+++++|+|+|||++|+.+.+
T Consensus 140 li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 140 LQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp HHHSCCCCEEEEEEEEEECTTT
T ss_pred ccCCCCCeEEEEEEEEEcCCcc
Confidence 333467999999999987543
No 37
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.86 E-value=7.6e-21 Score=152.89 Aligned_cols=108 Identities=26% Similarity=0.387 Sum_probs=96.7
Q ss_pred ccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEEcc
Q 016518 163 GGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITD 242 (388)
Q Consensus 163 ~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~lG 242 (388)
.++.++++++|+|...|..++.|+++ |++++.||++||++ +.++.|++|.+|
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~---------------------------y~~~~~dG~~~d~s-~~~~~p~~f~lG 57 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIH---------------------------YTGTLENGQKFDSS-VDRGSPFQCNIG 57 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEE---------------------------EEEEETTSCEEEES-TTTTCCEEEETT
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEE---------------------------EEEEECCCCEEEec-CCCCCcEEEEeC
Confidence 46899999999998668899998876 55555688999998 666789999999
Q ss_pred CCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 243 EEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 243 ~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
.+++++||+.+|.+|++||++.|.+||.+|||+.+. ++.|||+++|+|+|+|++++
T Consensus 58 ~~~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~~---~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 58 VGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGF---PGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp SSSSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEC
T ss_pred CCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC---CCCcCCCCeEEEEEEEEEeC
Confidence 999999999999999999999999999999999887 56799999999999999874
No 38
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.85 E-value=4.2e-21 Score=152.88 Aligned_cols=107 Identities=27% Similarity=0.515 Sum_probs=95.3
Q ss_pred cceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEEccC
Q 016518 164 GIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDE 243 (388)
Q Consensus 164 ~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~ 243 (388)
++.++++++|+|...|..++.|+++ |++++.||++||++ +.++.|++|.+|.
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~---------------------------y~~~~~dG~~~d~s-~~~~~p~~f~lG~ 52 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVH---------------------------YTGMLEDGKKFDSS-RDRNKPFKFMLGK 52 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEE---------------------------EEEEETTSCEEEEH-HHHTSCEEEETTS
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEE---------------------------EEEEECCCCEEEec-CCCCCCEEEEeCC
Confidence 4678999999998768899999876 55566688899998 5656899999999
Q ss_pred CcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 244 EQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 244 ~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
+++++||+.+|.+|++||++.|.+||+++||+.+. ++.|||+++|+|+|+|++++
T Consensus 53 ~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~---~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 53 QEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGH---PGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp CCSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEC
T ss_pred CChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCC---CCCcCCCCeEEEEEEEEEeC
Confidence 99999999999999999999999999999999887 56799999999999999874
No 39
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.85 E-value=2e-21 Score=160.84 Aligned_cols=115 Identities=26% Similarity=0.479 Sum_probs=93.8
Q ss_pred eecccCcCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeec-CceEEeecCCCC
Q 016518 155 TVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYDG 233 (388)
Q Consensus 155 ~~~dv~~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~-dg~~fd~s~~~~ 233 (388)
.+.+++.+.++.++++++|+|. .+..++.|++| |++++. +|++||++ +.+
T Consensus 18 ~~~~v~~~~gl~~~vl~~G~g~-~~~~gd~V~v~---------------------------Y~g~l~~~G~~fdss-~~~ 68 (134)
T 3b7x_A 18 RMLDISGDRGVLKDVIREGAGD-LVAPDASVLVK---------------------------YSGYLEHMDRPFDSN-YFR 68 (134)
T ss_dssp TCEESSSSSSEEEEEEECCEEE-ECCTTCEEEEE---------------------------EEEECTTCSSCSEEC----
T ss_pred ccceeeCCCCEEEEEEEcCCCC-CCCCCCEEEEE---------------------------EEEEECCCCeEEEec-CCC
Confidence 3567888999999999999987 35568888866 555554 57888888 666
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
+.|++|.+|.+++++||+.+|.+|++||++.|.|||++|||+.+. ++.|||+++|+|+|+|++|.
T Consensus 69 ~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~---~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 69 KTPRLMKLGEDITLWGMELGLLSMRRGELARFLFKPNYAYGTLGC---PPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp ----CEEC-CCCCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEC
T ss_pred CCCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC---CCCcCcCCeEEEEEEEEEEe
Confidence 789999999999999999999999999999999999999999887 56799999999999999985
No 40
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.85 E-value=1.2e-20 Score=152.88 Aligned_cols=112 Identities=29% Similarity=0.351 Sum_probs=99.8
Q ss_pred eecccCcCccceeeEeecCCCC-CCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC
Q 016518 155 TVVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (388)
Q Consensus 155 ~~~dv~~d~~v~kkil~~G~g~-~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~ 233 (388)
.+.++++++.+.++++++|+|. ..|..++.|+++| ++++.||++|+++
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y---------------------------~g~~~dG~~~ds~---- 53 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHL---------------------------QTSLENGTRVQEE---- 53 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEE---------------------------EEECTTSCEEEEE----
T ss_pred cceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEE---------------------------EEEECCCCEEECC----
Confidence 4678889999999999999986 4788899998764 5555578888875
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
+|++|.+|.+++++||+.+|.+|++||++.|.+||++|||+.+. ++.|||+++|+|+|+|+++.
T Consensus 54 -~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~---~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 54 -PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGR---SPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp -EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEE
T ss_pred -CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCC---CCccCCCCeEEEEEEEEEec
Confidence 79999999999999999999999999999999999999999887 56899999999999999986
No 41
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.85 E-value=9.3e-21 Score=162.03 Aligned_cols=122 Identities=23% Similarity=0.350 Sum_probs=104.6
Q ss_pred cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEE
Q 016518 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (388)
Q Consensus 161 ~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~ 240 (388)
.+.++.++++++|+|...|..++.|++| |.|++.||++||++ +.++.|++|.
T Consensus 35 ~~sGl~~~vl~~G~G~~~~~~gd~V~v~---------------------------Y~g~l~dG~~fdss-~~~g~p~~f~ 86 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKRAPAIDDKCEVH---------------------------YTGRLRDGTVFDSS-RERGKPTTFR 86 (167)
T ss_dssp CTTSCEEEEEECCCCSBCCCTTCCEEEE---------------------------EEEECTTSCEEEEH-HHHTSCEEEC
T ss_pred CCCCEEEEEEEcCCCCcCCCCCCEEEEE---------------------------EEEEECCCCEEeec-cccCCCEEEE
Confidence 4567899999999998658899998865 66666788999998 6667899999
Q ss_pred ccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeecCcCccccCchhHHHH
Q 016518 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQGKIEA 317 (388)
Q Consensus 241 lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~~~~~~l~~~e~~~~ 317 (388)
+| ++++||+.+|.+|++|+++.|.|||.+|||+.+. ++.|||+++|+|+|+|++|.+ ..|.++.+|.-+.
T Consensus 87 lg--~vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~---~~~Ipp~s~LiF~VeL~~i~~--~~~~~~~~e~~~~ 156 (167)
T 1jvw_A 87 PN--EVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGG---GGMIPPYSPLEFDVELISIKD--GGKGRTAEEVDEI 156 (167)
T ss_dssp GG--GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCS---SSSSCTTCCEEEEEEEEEEGG--GCCSCBHHHHHHH
T ss_pred eC--chhHHHHHHHcCCCCCCEEEEEECchhhCCCCCC---CCCcCCCCeEEEEEEEEEEEc--CCCCCCHHHHHHH
Confidence 95 8999999999999999999999999999999987 578999999999999999985 3466777765443
No 42
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=159.01 Aligned_cols=116 Identities=28% Similarity=0.330 Sum_probs=101.3
Q ss_pred eecccCcCccceeeEeecCCCC-CCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC
Q 016518 155 TVVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (388)
Q Consensus 155 ~~~dv~~d~~v~kkil~~G~g~-~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~ 233 (388)
.+.++++++.+.++++++|+|. ..|..++.|+++ |+|++.||++||++
T Consensus 35 ~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~---------------------------Y~g~l~dG~~fds~---- 83 (157)
T 2jwx_A 35 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH---------------------------LQTSLENGTRVQEE---- 83 (157)
T ss_dssp SCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEE---------------------------EEEECTTSCEEEEE----
T ss_pred ccceECCCCCEEEEEEEccCCCccCCCCCCEEEEE---------------------------EEEEECCCCEeecC----
Confidence 3456778888899999999985 578888888866 55666688899986
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcc-cccCCCCCCCCCeEEEEEEEeeeecCcC
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE-AKRDLATIPSCAKLYYEVEMMDFIKEKV 305 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~-~~~~~~~ip~~~~l~f~veL~~~~~~~~ 305 (388)
.|++|.+|.+++++||+.+|.+|++||+++|.|||++|||+.+ . .+.|||+++|+|+|+|+++.....
T Consensus 84 -~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~---~~~IPp~stLiF~VeL~~i~~~~~ 152 (157)
T 2jwx_A 84 -PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSR---SPYIPPHAALCLEVTLKTAVDLEH 152 (157)
T ss_dssp -EEEEEETTTTSSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCS---SSCCCTTCCEEEEEEEEEEEECSC
T ss_pred -CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEECchhcCCccccc---CCCcCCCCeEEEEEEEEEEEcccc
Confidence 7999999999999999999999999999999999999999988 4 467999999999999999987554
No 43
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.84 E-value=2.6e-20 Score=153.21 Aligned_cols=104 Identities=32% Similarity=0.474 Sum_probs=92.5
Q ss_pred eeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEEccCCc
Q 016518 166 VKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFITDEEQ 245 (388)
Q Consensus 166 ~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~ 245 (388)
.|+++++|+|...|..++.|+++ |++++.||++||++ +.++.|++|.+|.++
T Consensus 27 ~K~~l~~G~G~~~~~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~~~~p~~f~lG~g~ 78 (130)
T 2lgo_A 27 EKKVLTPGDGVTKPQAGKKVTVH---------------------------YDGRFPDGKQFDSS-RSRGKPFQFTLGAGE 78 (130)
T ss_dssp CEEEEECCCSSCCCCTTSEEEEE---------------------------EEEECTTSCEEECT-TTTTCCEEEETTSTT
T ss_pred EEEEEeccCCCccCCCCCEEEEE---------------------------EEEEECCCCEEEcc-CcCCCCEEEEeCCCC
Confidence 44599999998668899999876 55555678899998 677789999999999
Q ss_pred ccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeee
Q 016518 246 VIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (388)
Q Consensus 246 v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~ 300 (388)
+++||+.+|.+|++||++.|.|||.++||+.+. ++.|||+++|+|+|+|++|
T Consensus 79 vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~---~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 79 VIKGWDQGVATMTLGEKALFTIPYQLAYGERGY---PPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp SCHHHHHHHHHSCTTEEEEEEECTTTSTTTTCC---STTSCSSCCEEEEEEEEEC
T ss_pred ccHHHHHHHhCCCCCCEEEEEECcHHHCCCCCC---CCCcCCCCeEEEEEEEEEC
Confidence 999999999999999999999999999999887 5679999999999999985
No 44
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=8.9e-21 Score=157.20 Aligned_cols=124 Identities=26% Similarity=0.295 Sum_probs=107.1
Q ss_pred eecccCcCccceeeEeecCCCC-CCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC
Q 016518 155 TVVDLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (388)
Q Consensus 155 ~~~dv~~d~~v~kkil~~G~g~-~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~ 233 (388)
.+.++++++.+.++++++|+|. ..|..++.|+++ |++++.||++||++
T Consensus 9 ~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~---------------------------Y~g~~~dG~~fds~---- 57 (135)
T 2d9f_A 9 EWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVH---------------------------LQTSLENGTRVQEE---- 57 (135)
T ss_dssp SCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEE---------------------------EEEEESSSCEEEEE----
T ss_pred cCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEE---------------------------EEEEECCCCEEecC----
Confidence 4667889999999999999985 578889988876 55555678888875
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeecCcCccccCch
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKEKVPWEMNNQ 312 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~~~~~~l~~~ 312 (388)
.|++|.+|.+++++||+.+|.+|++||++.|.|||+++||+.+.. ++.|||+++|+|+|+|+++...++...+++.
T Consensus 58 -~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~--~~~Ip~~~~l~f~vel~~v~~~~~~e~~s~~ 133 (135)
T 2d9f_A 58 -PELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSR--SPYIPPHAALCLEVTLKTAVDRPDLEMSGPS 133 (135)
T ss_dssp -EEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCS--SSCCCTTCCEEEEEEEEEEESSCSSSSCCCC
T ss_pred -CCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcC--CCccCCCCeEEEEEEEEEeecCCchhhcCcC
Confidence 799999999999999999999999999999999999999998831 4689999999999999999987777666653
No 45
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.83 E-value=1.4e-20 Score=148.49 Aligned_cols=96 Identities=39% Similarity=0.629 Sum_probs=90.0
Q ss_pred CCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCC-C
Q 016518 59 WDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRD-S 137 (388)
Q Consensus 59 ~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~-~ 137 (388)
+..++.||.|++||++++.||++|++|+.++.|+.|.+|.+++++||+++|.+|++|++++| .+||+++||..+.+ .
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v--~ip~~~ayG~~~~~~~ 80 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKL--VIPSELGYGERGAPPK 80 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEE--EECGGGTTTTTCBTTT
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEE--EECHHHCcCCCCCCCC
Confidence 36799999999999999889999999997779999999999999999999999999999999 99999999999876 7
Q ss_pred CCCCCcEEEEEEEccceee
Q 016518 138 LPPNSVVQFEVELVSWITV 156 (388)
Q Consensus 138 ip~~~~l~~~i~l~~~~~~ 156 (388)
||++++++|+|+|+++...
T Consensus 81 Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 81 IPGGATLVFEVELLKIERR 99 (102)
T ss_dssp BCTTCCEEEEEEEEEEGGG
T ss_pred cCcCCeEEEEEEEEEeccc
Confidence 9999999999999988653
No 46
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.83 E-value=4.9e-20 Score=152.11 Aligned_cols=108 Identities=30% Similarity=0.439 Sum_probs=96.1
Q ss_pred cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEE
Q 016518 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (388)
Q Consensus 161 ~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~ 240 (388)
.+.++.++++++|++. .|..++.|+++ |++++.||++||++ +.++.|++|.
T Consensus 26 ~~~gl~~~~l~~G~G~-~~~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~~~~p~~f~ 76 (133)
T 2y78_A 26 TESGLKYEDLTEGSGA-EARAGQTVSVH---------------------------YTGWLTDGQKFDSS-KDRNDPFAFV 76 (133)
T ss_dssp CTTSCEEEEEECCSSC-BCCTTSEEEEE---------------------------EEEEETTSCEEEET-TTTTCCEEEE
T ss_pred CCCCEEEEEEEcCCCC-CCCCCCEEEEE---------------------------EEEEECCCCEEecc-CcCCCCEEEE
Confidence 4567899999999985 68888988876 55555688999998 6777899999
Q ss_pred ccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeee
Q 016518 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (388)
Q Consensus 241 lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~ 300 (388)
+|.+++++||+.+|.+|++||+++|.|||.++||+.+. .+.|||+++|+|+|+|++|
T Consensus 77 lG~g~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~~---~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 77 LGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGA---GGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp TTSSSSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEC
T ss_pred eCCCChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCCC---CCCCCCCCeEEEEEEEEEC
Confidence 99999999999999999999999999999999999887 4679999999999999975
No 47
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.83 E-value=8.9e-20 Score=161.99 Aligned_cols=123 Identities=27% Similarity=0.376 Sum_probs=104.1
Q ss_pred EEEEEccceeecccCcCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceE
Q 016518 146 FEVELVSWITVVDLSKDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTV 225 (388)
Q Consensus 146 ~~i~l~~~~~~~dv~~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~ 225 (388)
+++-+........++.+.++.++++++|+|.. |..++.|+++ |++++.||++
T Consensus 87 I~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G~~-~~~gd~V~v~---------------------------Y~g~l~dG~~ 138 (209)
T 3uf8_A 87 IEAHREQIGGSTVVTTESGLKYEDLTEGSGAE-ARAGQTVSVH---------------------------YTGWLTDGQK 138 (209)
T ss_dssp EEEECSCTTCCCCEECTTSCEEEEEECCCSCB-CCTTCEEEEE---------------------------EEEEETTSCE
T ss_pred chhhccccccccccCCCCceEEEEEEcCCCCc-CCCCCEEEEE---------------------------EEEEECCCCE
Confidence 34444333333445567789999999999874 8889988876 5666678899
Q ss_pred EeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeee
Q 016518 226 FEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDF 300 (388)
Q Consensus 226 fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~ 300 (388)
||++ +.++.|++|.+|.+++++||+.+|.+|++||++.|.|||.+|||+.+. ++.|||+++|+|+|+|++|
T Consensus 139 fdss-~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~---~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 139 FDSS-KDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGA---AGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EEES-GGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEC
T ss_pred EEEc-cccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCC---CCCcCCCCeEEEEEEEEEC
Confidence 9998 777899999999999999999999999999999999999999999987 5679999999999999985
No 48
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.83 E-value=9.2e-20 Score=149.20 Aligned_cols=114 Identities=22% Similarity=0.316 Sum_probs=98.5
Q ss_pred ccCcCccceeeEeecCCCC-CCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeec-CceEEeecCCC--C
Q 016518 158 DLSKDGGIVKKILEKGERD-ASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLE-DGTVFEKKGYD--G 233 (388)
Q Consensus 158 dv~~d~~v~kkil~~G~g~-~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~-dg~~fd~s~~~--~ 233 (388)
.+..+.++.++++++|.+. ..|..++.|++| |++++. ||++||++ +. .
T Consensus 7 ~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~---------------------------Y~g~~~~dG~~fdss-~~~~~ 58 (125)
T 4dip_A 7 ALIPEPEVKIEVLQKPFICHRKTKGGDLMLVH---------------------------YEGYLEKDGSLFHST-HKHNN 58 (125)
T ss_dssp GGCCCCCCEEEEEECCSCCSCCCCTTCEEEEE---------------------------EEEEETTTCCEEEEH-HHHTT
T ss_pred eEECCCCeEEEEEEcCCCCCCcCCCCCEEEEE---------------------------EEEEECCCCcEEEEc-ccCCC
Confidence 3446678999999999842 578888888865 566665 88999998 53 4
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeecC
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIKE 303 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~~ 303 (388)
+.|++|.+|.+++++||+.+|.+|++||++.|.|||.+|||+.+. +.|||+++|+|+|+|+++.+.
T Consensus 59 ~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~----~~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 59 GQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGK----GKIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp TCCEEEETTSCSSCHHHHHHSTTCCTTCEEEEEECGGGTTTTTCB----TTBCTTCCEEEEEEEEEEECC
T ss_pred CcCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEEChHHhcCCCCC----CCCCCCCeEEEEEEEEEEEcC
Confidence 689999999999999999999999999999999999999999986 589999999999999999764
No 49
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.80 E-value=3.4e-19 Score=158.02 Aligned_cols=104 Identities=27% Similarity=0.407 Sum_probs=93.5
Q ss_pred cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEE
Q 016518 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (388)
Q Consensus 161 ~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~ 240 (388)
.+.++.++++++|+|. .|..++.|+++ |+|++.||++||++ +.|++|.
T Consensus 115 ~~sGl~y~vl~~G~G~-~p~~gd~V~V~---------------------------Y~g~l~dG~vfDss----~~P~~f~ 162 (219)
T 3oe2_A 115 LADGILMTELTPGTGP-KPDANGRVEVR---------------------------YVGRLPDGKIFDQS----TQPQWFR 162 (219)
T ss_dssp CGGGCEEEEEECCCSC-CCCTTSEEEEE---------------------------EEEECTTSCEEEEC----SSCEEEE
T ss_pred CCCCeEEEEEecCCCc-cCCCCCEEEEE---------------------------EEEEECCCCEeecc----CCcEEEE
Confidence 4567899999999986 68889988865 66667789999997 6899999
Q ss_pred ccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 241 lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
+| ++++||+.+|.+|++|++++|+|||.+|||+.+. ++.|||+++|+|+|+|++|+
T Consensus 163 lG--~vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~---~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 163 LD--SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGA---GDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GG--GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEE
T ss_pred ec--chhHHHHHHHhCCCCCCEEEEEECchhcCCCCCC---CCCCCCCCeEEEEEEEEEEe
Confidence 98 8999999999999999999999999999999987 45799999999999999986
No 50
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.80 E-value=6.2e-19 Score=163.69 Aligned_cols=116 Identities=34% Similarity=0.501 Sum_probs=105.0
Q ss_pred ecccC--cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC
Q 016518 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (388)
Q Consensus 156 ~~dv~--~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~ 233 (388)
..|++ .++++.++++++|+|+..|..++.|+++ |++++.||++||++ +.+
T Consensus 42 ~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~~ 93 (280)
T 1q1c_A 42 GVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVH---------------------------YTGWLLDGTKFDSS-LDR 93 (280)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEE---------------------------EEEEETTSCEEEES-TTS
T ss_pred ccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEE---------------------------EEEEECCCCEEEec-ccC
Confidence 55777 7889999999999999779999999876 55566688999998 677
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeec
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~ 302 (388)
+.|++|.+|.+++++||+.+|.+|++||++.|.|||++|||+.+. ++.||++++|+|+|+|++|..
T Consensus 94 ~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~---~~~Ip~~~~lvf~Vel~~i~~ 159 (280)
T 1q1c_A 94 KDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGS---PPKIPPNATLVFEVELFEFKG 159 (280)
T ss_dssp SSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEECcHHhCCCcCc---cCCCCCCCcEEEEEEeeeecc
Confidence 789999999999999999999999999999999999999999987 578999999999999999975
No 51
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.78 E-value=7.4e-19 Score=155.93 Aligned_cols=108 Identities=25% Similarity=0.395 Sum_probs=96.0
Q ss_pred cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEE
Q 016518 161 KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFI 240 (388)
Q Consensus 161 ~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~ 240 (388)
...++.++++++|+|. .|..++.|++| |.|++.||++||++ +.++.|++|.
T Consensus 104 ~~sGl~y~vl~~G~G~-~p~~gD~V~V~---------------------------Y~g~l~dG~vfdss-~~~g~p~~f~ 154 (213)
T 1fd9_A 104 LPSGLQYKVINSGNGV-KPGKSDTVTVE---------------------------YTGRLIDGTVFDST-EKTGKPATFQ 154 (213)
T ss_dssp CTTSCEEEEEECCCSC-CCCTTCEEEEE---------------------------EEEEETTSCEEEEH-HHHCSCEEEE
T ss_pred CCCccEEEEEecCCCc-cCCCCCEEEEE---------------------------EEEEECCCCEEeec-cccCCCEEEE
Confidence 4567899999999985 78888888865 66677789999999 6777899999
Q ss_pred ccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeec
Q 016518 241 TDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (388)
Q Consensus 241 lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~ 302 (388)
+| ++++||+.+|.+|++|++++|.|||.++||+.+. ++.|||+++|+|+|+|++|.+
T Consensus 155 lg--~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~---~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 155 VS--QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSV---GGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp GG--GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTCCC---SSSCCTTCCEEEEEEEEEEEC
T ss_pred cC--chhhHHHHHHcCCCCCCEEEEEECchhccCccCC---CCCCCCCCeEEEEEEEEEEEc
Confidence 95 8999999999999999999999999999999886 568999999999999999975
No 52
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.78 E-value=8e-19 Score=138.32 Aligned_cols=86 Identities=34% Similarity=0.512 Sum_probs=77.6
Q ss_pred eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEE
Q 016518 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYY 293 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f 293 (388)
+||++++.||++||++ +.++.|++|.+|.+++++||+.+|.+|++||++.|.+||++|||+.+. ++.|||+++|+|
T Consensus 14 v~y~~~~~dG~~~d~s-~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~---~~~Ip~~~~l~f 89 (102)
T 2pbc_A 14 MHYTGKLEDGTEFDSS-LPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGA---PPKIPGGATLVF 89 (102)
T ss_dssp EEEEEECTTSCEEEES-TTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEE
T ss_pred EEEEEEECCCCEEEeC-CCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC---CCCcCcCCeEEE
Confidence 3466666688999998 677789999999999999999999999999999999999999999887 568999999999
Q ss_pred EEEEeeeecC
Q 016518 294 EVEMMDFIKE 303 (388)
Q Consensus 294 ~veL~~~~~~ 303 (388)
+|+|+++...
T Consensus 90 ~v~l~~v~~~ 99 (102)
T 2pbc_A 90 EVELLKIERR 99 (102)
T ss_dssp EEEEEEEGGG
T ss_pred EEEEEEeccc
Confidence 9999999764
No 53
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.78 E-value=6.9e-19 Score=144.71 Aligned_cols=110 Identities=23% Similarity=0.336 Sum_probs=94.1
Q ss_pred CccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEEc
Q 016518 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFIT 241 (388)
Q Consensus 162 d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~l 241 (388)
+.++.++++++|++. .|..++.|++| |++++.||++||++ +.++.|++|.+
T Consensus 11 ~~Gl~~~~l~~G~G~-~~~~gd~V~v~---------------------------Y~g~~~dG~~fdss-~~~~~p~~f~l 61 (129)
T 1u79_A 11 PSGLAFCDKVVGYGP-EAVKGQLIKAH---------------------------YVGKLENGKVFDSS-YNRGKPLTFRI 61 (129)
T ss_dssp TTSCEEEEEECCSSC-BCCTTCEEEEE---------------------------EEEECTTSCEEEEH-HHHTSCEEEET
T ss_pred CCCeEEEEEEcCCCC-CCCCCCEEEEE---------------------------EEEEECCCCEEEec-CCCCCCEEEEe
Confidence 457899999999986 57888888876 55555678899998 66678999999
Q ss_pred cCCcccchHHHHHcc------ccCCcEEEEEecCCCCCCCccccc--CCCCCCCCCeEEEEEEEeee
Q 016518 242 DEEQVIAGLDRVAAT------MKKEEWAIVTINHEYGFGNVEAKR--DLATIPSCAKLYYEVEMMDF 300 (388)
Q Consensus 242 G~~~v~~gle~~l~~------M~~Ge~~~v~i~~~~~yg~~~~~~--~~~~ip~~~~l~f~veL~~~ 300 (388)
|.+++++||+.+|.+ |++||+++|.|||.++||+.+... ..+.|||+++|+|+|+|++|
T Consensus 62 G~~~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 62 GVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TSSSSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCCCccHHHHHHhcccccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999988 999999999999999999987620 02479999999999999986
No 54
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.77 E-value=2.8e-18 Score=153.21 Aligned_cols=105 Identities=31% Similarity=0.545 Sum_probs=93.5
Q ss_pred CccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCCCCCeEEEc
Q 016518 162 DGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDGEQPLEFIT 241 (388)
Q Consensus 162 d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~~~p~~f~l 241 (388)
..++..+++++|+|. .|..++.|++| |+|++.||++||++ +.++.|++|.+
T Consensus 120 ~sGl~y~vl~~G~G~-~p~~gD~V~V~---------------------------Y~g~l~dG~vfdss-~~~g~p~~f~l 170 (224)
T 1q6h_A 120 STGLVYQVVEAGKGE-APKDSDTVVVN---------------------------YKGTLIDGKEFDNS-YTRGEPLSFRL 170 (224)
T ss_dssp TTSCEEEEEECCSSC-CCCTTCEEEEE---------------------------EEEEETTSCEEEEG-GGGTSCEEEEG
T ss_pred CCceEEEEEecccCc-cccCCCEEEEE---------------------------EEEEeCCCCEEeec-cccCCCEEEEc
Confidence 467889999999986 78888888865 66677789999999 77788999999
Q ss_pred cCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 242 DEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 242 G~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
| ++++||+.+|.+|++|++++|.|||.++||+.+. + .|||+++|+|+|+|++|.
T Consensus 171 g--~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~---~-~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 171 D--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGV---P-GIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp G--GSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCB---T-TBCTTCCEEEEEEEEEEC
T ss_pred C--CcchhHHHHHcCCCCCCEEEEEECchhhcCcCCC---C-CCCCCCEEEEEEEEEEeC
Confidence 5 8999999999999999999999999999999886 3 499999999999999974
No 55
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.76 E-value=1.9e-18 Score=147.24 Aligned_cols=125 Identities=22% Similarity=0.349 Sum_probs=96.5
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCCCC
Q 016518 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (388)
Q Consensus 61 ~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~ip~ 140 (388)
.+++||.|+|||++++.||++|++|+.++.|+.|.+|.+++|+||+++|.+|++|++++| .|||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v--~Ipp~~AYG~~~------ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTF--SLEPDAAFGVPS------ 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEE--EECGGGTTCCCC------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEE--EEChHHhcCCCC------
Confidence 689999999999999999999999987778999999999999999999999999999999 999999999975
Q ss_pred CCcEEEEEEEccceeecccC---------cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 141 NSVVQFEVELVSWITVVDLS---------KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 141 ~~~l~~~i~l~~~~~~~dv~---------~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
..++..+....+.....+. .++....-++.+ ..++.|++++||+|+|.++.|+
T Consensus 96 -~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~-------v~~~~V~vD~NHPLAGk~L~F~ 157 (169)
T 4dt4_A 96 -PDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIRE-------INGDSITVDFNHPLAGQTVHFD 157 (169)
T ss_dssp -GGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEE-------EETTEEEEECSCTTTTCCEEEE
T ss_pred -hHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEE-------EcCCEEEEeCCCccCCCEEEEE
Confidence 3344444443332111111 222211111111 2567999999999999998874
No 56
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.74 E-value=3e-18 Score=170.70 Aligned_cols=116 Identities=34% Similarity=0.558 Sum_probs=81.7
Q ss_pred ecccC--cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeecCCCCceeEEeeceEEEEeecCceEEeecCCCC
Q 016518 156 VVDLS--KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAKTPEEGVEFYLKDVSYIARLEDGTVFEKKGYDG 233 (388)
Q Consensus 156 ~~dv~--~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~~~~~g~~~~~~~v~y~g~~~dg~~fd~s~~~~ 233 (388)
..|++ .++++.++++++|+|+..|..++.|++| |+|++.||++||+| +.+
T Consensus 22 ~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~---------------------------y~~~~~~g~~~dss-~~~ 73 (457)
T 1kt0_A 22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVH---------------------------YKGKLSNGKKFDSS-HDR 73 (457)
T ss_dssp -----------CEEEC--------CCCBTCEEEEE---------------------------EEEEC-----CBC-----
T ss_pred cccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEE---------------------------EEEEECCCCEEecc-CCC
Confidence 44666 7889999999999999779999999876 55555678899998 777
Q ss_pred CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeeec
Q 016518 234 EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFIK 302 (388)
Q Consensus 234 ~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~~ 302 (388)
+.|++|.+|.+++++||+.+|.+|++||++.|+|||.++||..|. ++.|||+++|+|+|+|++|..
T Consensus 74 ~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~---~~~i~~~~~l~~~v~l~~~~~ 139 (457)
T 1kt0_A 74 NEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGS---LPKIPSNATLFFEIELLDFKG 139 (457)
T ss_dssp --CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB---TTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEChHHhccccCC---CCCCCCCCcEEEEEeeceeec
Confidence 889999999999999999999999999999999999999999987 678999999999999999875
No 57
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.74 E-value=2.2e-17 Score=139.02 Aligned_cols=124 Identities=23% Similarity=0.343 Sum_probs=96.3
Q ss_pred CCCCCCCEEEEEEEEEEc-CCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCC
Q 016518 60 DTPEFGDEVTIHYVGTLL-DGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSL 138 (388)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~-dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~i 138 (388)
..++.||.|++||++++. ||++|++|+.. .|+.|.+|.+++++||+++|.+|++|++++| .|||+.+||.++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v--~ipp~~aYG~~~---- 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEV--VIAPEEAYGVYE---- 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEE--EECGGGTTCSSC----
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEE--EEecHHHcCCCC----
Confidence 568899999999999998 99999999865 8999999999999999999999999999999 999999999975
Q ss_pred CCCCcEEEEEEEccceeecccC---------cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 139 PPNSVVQFEVELVSWITVVDLS---------KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 139 p~~~~l~~~i~l~~~~~~~dv~---------~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
..+++.+....+ ....+. .++....-++. -..++.|++++||+|+|.++.|+
T Consensus 78 ---~~~v~~v~~~~f-~~~~~~~G~~~~~~~~~G~~~~~~V~-------~v~~~~v~vD~NHPLAG~~L~F~ 138 (151)
T 2kr7_A 78 ---SSYLQEVPRDQF-EGIELEKGMSVFGQTEDNQTIQAIIK-------DFSATHVMVDYNHPLAGKTLAFR 138 (151)
T ss_dssp ---SCEEEEEEGGGG-TTSCCCTTCEEEEEETTTEEEEEEEE-------EECSSEEEEEECCTTSCCCEEEE
T ss_pred ---cceEEEEcHHHc-CCCCCccCCEEEEECCCCCEEEEEEE-------EECCCEEEEECCCcCCCCEEEEE
Confidence 345555555444 111111 12211111111 22567999999999999998874
No 58
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.74 E-value=1.8e-17 Score=158.44 Aligned_cols=107 Identities=27% Similarity=0.535 Sum_probs=97.9
Q ss_pred eecCCCeEEEEEEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCc---ccccHHHHhcccccCceE
Q 016518 42 GLGNSGIKKKLLKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQ---VATGLDNGIITMKKRECA 118 (388)
Q Consensus 42 ~~~~~g~~~~il~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~---~~~g~~~~l~~m~~Ge~~ 118 (388)
..+++|+.|+|+++|+|..+|..||.|+|||++++ +|++|+++ |+.|.+|.|. ++++|+.||.+|++|+++
T Consensus 21 ~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~ 94 (336)
T 1p5q_A 21 MEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 94 (336)
T ss_dssp -CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred ecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhcCCCCCeE
Confidence 56799999999999999668999999999999998 99999986 8999999887 589999999999999999
Q ss_pred EEEEEcCCCCCCCCCCCC--CCCCCCcEEEEEEEccceee
Q 016518 119 VFTFTLPSELRFGVEGRD--SLPPNSVVQFEVELVSWITV 156 (388)
Q Consensus 119 ~v~~~vp~~~~yg~~~~~--~ip~~~~l~~~i~l~~~~~~ 156 (388)
.+ .++|+++||..|.. .||+++.+.|++.|.++...
T Consensus 95 ~l--~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A 132 (336)
T 1p5q_A 95 IV--YLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKA 132 (336)
T ss_dssp EE--EECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECC
T ss_pred EE--EECCccccCcCCCCccCCCCCCeEEEEEEEeecccc
Confidence 99 99999999999987 69999999999999887543
No 59
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.71 E-value=2.9e-17 Score=143.44 Aligned_cols=130 Identities=17% Similarity=0.188 Sum_probs=93.8
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCCCC
Q 016518 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (388)
Q Consensus 61 ~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~ip~ 140 (388)
++++||+|+|||++++.||++|++|+.. .|+.|.+|.+++||+|+++|.+|++|++++| .|||+.+||.++..
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v--~Ippe~aYGe~~~~---- 74 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDV--AVGANDAYGQYDEN---- 74 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEE--ECSTTTTSSCCCTT----
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEE--EeCcHHhcCCCChh----
Confidence 3789999999999998899999999875 8999999999999999999999999999999 99999999998643
Q ss_pred CCcEEEEEEEccceeecccCcCccceeeEeecC--CCCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 141 NSVVQFEVELVSWITVVDLSKDGGIVKKILEKG--ERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 141 ~~~l~~~i~l~~~~~~~dv~~d~~v~kkil~~G--~g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
+++.+....+.....+.. +..+......| .+...-..++.|+++||++|++.++.|+
T Consensus 75 ---lV~~vp~~~f~~~~~~~~-G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~ 133 (196)
T 2kfw_A 75 ---LVQRVPKDVFMGVDELQV-GMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFN 133 (196)
T ss_dssp ---TCEEECGGGCCCSSCCCT-TCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEE
T ss_pred ---hEEEEEHHHCCCccCccc-CCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEE
Confidence 333333333221111110 11110000001 0012234678999999999999998774
No 60
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.71 E-value=6.9e-18 Score=142.42 Aligned_cols=127 Identities=28% Similarity=0.392 Sum_probs=91.8
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCC-------------CCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCC
Q 016518 62 PEFGDEVTIHYVGTLLDGTKFDSTRDR-------------YDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSEL 128 (388)
Q Consensus 62 ~~~gd~V~v~y~~~~~dg~~~~ss~~~-------------~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~ 128 (388)
+++||.|+|||++++ ||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|++++| .|||++
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v--~Ipp~~ 78 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREV--VLPPEK 78 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEE--EECGGG
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEE--EECcHH
Confidence 689999999999999 99999999863 37999999999999999999999999999999 999999
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEccceeecccCcCccceeeEeecC-CCCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 129 RFGVEGRDSLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKG-ERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 129 ~yg~~~~~~ip~~~~l~~~i~l~~~~~~~dv~~d~~v~kkil~~G-~g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
|||+++.. ++..+..-.+.. .++....+ ..+.-.+ .+...-..++.|++++||+|+|.++.|+
T Consensus 79 aYG~~~~~-------~V~~v~~~~f~~-~~~~~~~G--~~~~~~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~ 142 (157)
T 3pr9_A 79 AFGKRDPS-------KIKLIPLSEFTK-RGIKPIKG--LTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYR 142 (157)
T ss_dssp TTCCCCGG-------GEEEEEHHHHHH-TTCCCCTT--CEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEE
T ss_pred hcCCCChH-------hEEEcCHHHCCc-ccCCcCCC--cEEEecCCCeEEEEEcCCEEEEECCCccCCCeEEEE
Confidence 99998633 333333322221 01110000 0000011 0111122567999999999999998874
No 61
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.70 E-value=9.5e-17 Score=137.46 Aligned_cols=122 Identities=18% Similarity=0.214 Sum_probs=93.4
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCCCCC
Q 016518 62 PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPPN 141 (388)
Q Consensus 62 ~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~ip~~ 141 (388)
+++||.|+++|++++.||++|++|+.. .|+.|.+|.+++++||+++|.+|++|++++| .|||+.+||.++..
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v--~ippe~aYG~~~~~----- 74 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDV--AVGANDAYGQYDEN----- 74 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEE--EEETTTSSCCCCTT-----
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEE--EECcHHhcCCCChh-----
Confidence 789999999999998899999999865 8999999999999999999999999999999 99999999998633
Q ss_pred CcEEEEEEEccceeecccC---------cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 142 SVVQFEVELVSWITVVDLS---------KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 142 ~~l~~~i~l~~~~~~~dv~---------~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
+++.+....+.....+. .++.+.-+|+. ..++.|++++|++|+|.++.|+
T Consensus 75 --~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~--------v~~~~V~vD~NHPLAGk~L~F~ 133 (171)
T 2k8i_A 75 --LVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITA--------VEDDHVVVDGNHMLAGQNLKFN 133 (171)
T ss_dssp --SEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEE--------ECSSEEEEESCCSSCCCEEEEE
T ss_pred --hEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEE--------EcCCEEEEeCCCCCCCCeEEEE
Confidence 34444443332111111 12211111221 2567999999999999998874
No 62
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.70 E-value=1e-17 Score=141.08 Aligned_cols=128 Identities=21% Similarity=0.424 Sum_probs=93.0
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccC-------------CCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCC
Q 016518 61 TPEFGDEVTIHYVGTLLDGTKFDSTRD-------------RYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSE 127 (388)
Q Consensus 61 ~~~~gd~V~v~y~~~~~dg~~~~ss~~-------------~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~ 127 (388)
.+++||.|++||++++.||++|++|+. ...|+.|.+|.+++++||+++|.+|++|++++| .|||+
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v--~ipp~ 78 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTV--KIPAE 78 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEE--EECTT
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEE--EECcH
Confidence 368999999999999889999999973 237999999999999999999999999999999 99999
Q ss_pred CCCCCCCCCCCCCCCcEEEEEEEcccee-ecccCcCccceeeEeecCC-CCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 128 LRFGVEGRDSLPPNSVVQFEVELVSWIT-VVDLSKDGGIVKKILEKGE-RDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 128 ~~yg~~~~~~ip~~~~l~~~i~l~~~~~-~~dv~~d~~v~kkil~~G~-g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
.|||.++.. +++.+.+..+.. ...+. -| ..+.-.+. +...-..++.|+++|||+|+|.++.|+
T Consensus 79 ~aYG~~~~~-------~v~~v~~~~f~~~~~~~~-~G---~~~~~~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~ 143 (151)
T 1ix5_A 79 KAYGNRNEM-------LIQKIPRDAFKEADFEPE-EG---MVILAEGIPATITEVTDNEVTLDFNHELAGKDLVFT 143 (151)
T ss_dssp TSSCSCCST-------TBCCEETHHHHTSTTCCC-TT---EEEESSSCEEEEEEEETTEEEEECCCSSTTCCEEEE
T ss_pred HHCCCCCcc-------EEEEEEHHHcCccCCccc-cc---CEEEECCeEEEEEEEcCCEEEEeCCCCCCCCeEEEE
Confidence 999997643 344444443321 01111 00 00000000 001122567999999999999998774
No 63
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.67 E-value=5.3e-17 Score=144.95 Aligned_cols=127 Identities=28% Similarity=0.392 Sum_probs=91.0
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCC-------------CCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCC
Q 016518 62 PEFGDEVTIHYVGTLLDGTKFDSTRDR-------------YDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSEL 128 (388)
Q Consensus 62 ~~~gd~V~v~y~~~~~dg~~~~ss~~~-------------~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~ 128 (388)
+++||.|++||++++ ||++|++|+.. +.|+.|.+|.+++++||+++|.+|++|++++| .|||++
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v--~Ippe~ 78 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREV--VLPPEK 78 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEE--EECGGG
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEE--EeCcHH
Confidence 688999999999999 99999999853 37999999999999999999999999999999 999999
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEccceeecccCcCccceeeEeecC-CCCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 129 RFGVEGRDSLPPNSVVQFEVELVSWITVVDLSKDGGIVKKILEKG-ERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 129 ~yg~~~~~~ip~~~~l~~~i~l~~~~~~~dv~~d~~v~kkil~~G-~g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
|||.++.. ++..+..-.+.. .++....| ..+...| .+...-..++.|++++||+|+|.++.|+
T Consensus 79 AYGe~~~~-------lv~~vp~~~f~~-~~~~~~vG--~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~ 142 (231)
T 3prb_A 79 AFGKRDPS-------KIKLIPLSEFTK-RGIKPIKG--LTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYR 142 (231)
T ss_dssp TTCCCCGG-------GEEEEETHHHHT-TTCCCCTT--CEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEE
T ss_pred hcCCCChH-------HEEecCHHHCCc-ccCCCCCC--cEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEE
Confidence 99998643 333333222211 01110000 0000000 0111122467999999999999998774
No 64
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.63 E-value=6.3e-16 Score=123.53 Aligned_cols=90 Identities=23% Similarity=0.382 Sum_probs=74.6
Q ss_pred EEccCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcC-CCCCCC
Q 016518 53 LKNGVDWDTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLP-SELRFG 131 (388)
Q Consensus 53 l~~G~g~~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp-~~~~yg 131 (388)
++.-++ ..++.||.|+|||++++ ||++|++++ +.|+.|.+|.+++|+||+++|.+|++|++++| .|| |.. ||
T Consensus 22 ~~~v~~-~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v--~i~fP~~-Yg 94 (113)
T 1hxv_A 22 MVDVSD-KKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTL--ALTFPSD-YH 94 (113)
T ss_dssp --------CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEE--CCCCCTT-SS
T ss_pred EEecCC-CCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEE--EEeCchh-hC
Confidence 333334 57999999999999998 999999996 48999999999999999999999999999999 885 333 88
Q ss_pred CCCCCCCCCCCcEEEEEEEccc
Q 016518 132 VEGRDSLPPNSVVQFEVELVSW 153 (388)
Q Consensus 132 ~~~~~~ip~~~~l~~~i~l~~~ 153 (388)
..+ .++++++|+|+|+++
T Consensus 95 ~~~----~~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 95 VKE----LQSKPVTFEVVLKAI 112 (113)
T ss_dssp SSG----GGSCCCEEEEEECCB
T ss_pred cCC----CCCCEEEEEEEEEEE
Confidence 765 368999999999876
No 65
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.63 E-value=7.8e-16 Score=130.16 Aligned_cols=118 Identities=18% Similarity=0.236 Sum_probs=91.6
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCCCCC
Q 016518 62 PEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPPN 141 (388)
Q Consensus 62 ~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~ip~~ 141 (388)
++.||.|++||+++ .||++|++|+ +.|.+|.+++++||+++|.+|++|++++| .|||+.+||.++
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v--~ipp~~aYG~~~------- 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQA--HVPAEKAYGPHD------- 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEE--EECGGGTTCCCC-------
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEE--EECcHHHcCCCC-------
Confidence 67899999999999 8999999986 89999999999999999999999999999 999999999874
Q ss_pred CcEEEEEEEccceeecccC---------cCccceeeEeecCCCCCCCCCCCeEEEEEEEecCCcceeec
Q 016518 142 SVVQFEVELVSWITVVDLS---------KDGGIVKKILEKGERDASPGDLDEVLVKYQVMLGDGTMVAK 201 (388)
Q Consensus 142 ~~l~~~i~l~~~~~~~dv~---------~d~~v~kkil~~G~g~~~p~~~~~V~v~y~~~l~~~~~v~~ 201 (388)
..+++.+.+..+.....+. .++....-++. -..++.|++++|++|+|.++.|+
T Consensus 68 ~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~-------~v~~~~v~vD~NHPLAGk~L~F~ 129 (158)
T 3cgm_A 68 PEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVV-------AVEGEEVTVDFNHPLAGKDLDFQ 129 (158)
T ss_dssp GGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEE-------EEETTEEEEECSCTTTTCCEEEE
T ss_pred cceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEE-------EECCCEEEEeCCccccCCEEEEE
Confidence 4566666665553211111 12221111111 12567999999999999998874
No 66
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.51 E-value=1.9e-14 Score=122.45 Aligned_cols=64 Identities=20% Similarity=0.365 Sum_probs=57.9
Q ss_pred eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCccc
Q 016518 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 278 (388)
+||++++.||++||++ +.+++|+.|.+|.+++++||+.+|.+|++||++.|.|||++|||+++.
T Consensus 33 v~Y~g~l~dG~vfDss-~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~ 96 (169)
T 4dt4_A 33 VHFTLKLDDGTTAEST-RNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSP 96 (169)
T ss_dssp EEEEEEETTSCEEEEH-HHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEECCCCEEEec-CCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCCh
Confidence 4577777789999998 666789999999999999999999999999999999999999998653
No 67
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.48 E-value=5.1e-14 Score=118.70 Aligned_cols=63 Identities=29% Similarity=0.463 Sum_probs=56.8
Q ss_pred eEEEEeecCceEEeecCCCC-------------CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCccc
Q 016518 214 VSYIARLEDGTVFEKKGYDG-------------EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~-------------~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 278 (388)
+||+|++ ||++||+| +.. +.|++|.+|.+++++||+.+|.+|++||++.|.|||++|||+++.
T Consensus 10 v~Y~g~l-dG~vfDss-~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aYG~~~~ 85 (157)
T 3pr9_A 10 ISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDP 85 (157)
T ss_dssp EEEEEEE-TTEEEEES-CHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEE-CCEEEEec-cccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 6788888 89999998 442 379999999999999999999999999999999999999998764
No 68
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.45 E-value=1.5e-13 Score=109.73 Aligned_cols=75 Identities=13% Similarity=0.208 Sum_probs=64.4
Q ss_pred eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEec-CCCCCCCcccccCCCCCCCCCeEE
Q 016518 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTIN-HEYGFGNVEAKRDLATIPSCAKLY 292 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~-~~~~yg~~~~~~~~~~ip~~~~l~ 292 (388)
++|++++ ||++||++ + +.|+.|.+|.++++|||+.+|.+|++|+++.|.|| |.. ||..+. ++++|+
T Consensus 38 v~Y~g~~-dG~~fdss-~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~--------~g~~l~ 104 (113)
T 1hxv_A 38 IDFTGIV-DNKKLASA-S--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL--------QSKPVT 104 (113)
T ss_dssp EEEEEEE-TTEECSTT-C--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG--------GSCCCE
T ss_pred EEEEEEE-CCEEcccC-C--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC--------CCCEEE
Confidence 5677777 88999998 2 68999999999999999999999999999999996 443 887543 568999
Q ss_pred EEEEEeeee
Q 016518 293 YEVEMMDFI 301 (388)
Q Consensus 293 f~veL~~~~ 301 (388)
|+|+|++|.
T Consensus 105 F~V~l~~Vk 113 (113)
T 1hxv_A 105 FEVVLKAIK 113 (113)
T ss_dssp EEEEECCBC
T ss_pred EEEEEEEEC
Confidence 999999873
No 69
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.42 E-value=3.2e-13 Score=120.52 Aligned_cols=63 Identities=29% Similarity=0.463 Sum_probs=56.7
Q ss_pred eEEEEeecCceEEeecCCCC-------------CCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCccc
Q 016518 214 VSYIARLEDGTVFEKKGYDG-------------EQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~-------------~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 278 (388)
+||+|++ ||++||+| +.. +.|+.|.+|.+++++||+.+|.+|++|+++.|.|||++|||+++.
T Consensus 10 v~Y~g~l-dG~vfDss-~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AYGe~~~ 85 (231)
T 3prb_A 10 ISYDGYV-DGKLFDTT-NEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKRDP 85 (231)
T ss_dssp EEEEEEE-TTEEEEES-CHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEEE-CCEEEEec-cchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 6788888 99999998 432 379999999999999999999999999999999999999998763
No 70
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.42 E-value=1.4e-12 Score=111.61 Aligned_cols=62 Identities=19% Similarity=0.412 Sum_probs=56.1
Q ss_pred eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcc
Q 016518 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~ 277 (388)
++|++++.||++||++ +. .+|++|.+|.++++|||+.+|.+|++|+++.|.|||+.|||+++
T Consensus 11 v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 11 LAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp EEEEEEETTSCEEEEC-CS-SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred EEEEEEECCCCEEeec-cC-CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 5677777789999998 43 37999999999999999999999999999999999999999874
No 71
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.40 E-value=8.5e-13 Score=110.89 Aligned_cols=63 Identities=32% Similarity=0.590 Sum_probs=56.4
Q ss_pred eEEEEeec-CceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCccc
Q 016518 214 VSYIARLE-DGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (388)
Q Consensus 214 v~y~g~~~-dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 278 (388)
+||++++. ||++||++ +. ..|+.|.+|.+++++||+.+|.+|++|+++.|.|||+.|||+++.
T Consensus 15 v~Y~g~~~~dG~~fdss-~~-~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 15 IEYEVREQGSSIVLDSN-IS-KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp EEEEEEESSCSCEEEES-TT-TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred EEEEEEECCCCCEEEeC-CC-CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 56777776 89999998 43 479999999999999999999999999999999999999998753
No 72
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.39 E-value=2.6e-13 Score=113.99 Aligned_cols=64 Identities=34% Similarity=0.609 Sum_probs=56.5
Q ss_pred eEEEEeecCceEEeecCCC-------------CCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCccc
Q 016518 214 VSYIARLEDGTVFEKKGYD-------------GEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~-------------~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 278 (388)
+||++++.||++||+| +. ...|++|.+|.+++++||+.+|.+|++|+++.|.|||+.|||+++.
T Consensus 10 v~Y~g~~~dG~~fdss-~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aYG~~~~ 86 (151)
T 1ix5_A 10 VDYIGKLESGDVFDTS-IEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYGNRNE 86 (151)
T ss_dssp ECCEECCTTSCCCEES-CHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSSCSCCS
T ss_pred EEEEEEECCCCEEEec-chhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHCCCCCc
Confidence 5677777788899998 43 3469999999999999999999999999999999999999998764
No 73
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.38 E-value=1.8e-12 Score=113.08 Aligned_cols=62 Identities=19% Similarity=0.412 Sum_probs=55.9
Q ss_pred eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcc
Q 016518 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVE 277 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~ 277 (388)
++|++++.||++||++ +. ..|++|.+|.++++|||+.+|.+|++|+++.|.|||+.|||+++
T Consensus 11 v~Y~g~~~dG~~fdss-~~-~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 11 LAYQVRTEDGVLVDES-PV-SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp EEEEEEETTTEEEEEC-CT-TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred EEEEEEECCCCEEEec-CC-CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 5577777789999998 43 47999999999999999999999999999999999999999875
No 74
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.25 E-value=1.2e-11 Score=104.38 Aligned_cols=58 Identities=17% Similarity=0.376 Sum_probs=53.1
Q ss_pred eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCccc
Q 016518 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEA 278 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~ 278 (388)
++|+++ .||++||++ + +.|.+|.++++|||+.+|.+|++|+++.|.|||+.|||+++.
T Consensus 11 v~Y~g~-~dG~~fdss-~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 11 IRYTLQ-VEGEVLDQG-E-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp EEEEEE-ETTEEEEEE-E-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred EEEEEE-ECCEEEEee-E-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 567777 789999998 3 999999999999999999999999999999999999998753
No 75
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.18 E-value=4.5e-11 Score=117.44 Aligned_cols=89 Identities=21% Similarity=0.382 Sum_probs=80.5
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCCC
Q 016518 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLP 139 (388)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~ip 139 (388)
..++.||.|++||+++. ||+.|++++ +.|+.|.+|.|+++|||+.+|.||++|+++.| .+|+..+||..+ .
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v--~v~~~~~yg~~~----l 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTI--DVTFPEEYHAEN----L 226 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEE--EEECCTTCSCTT----T
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEE--EECCchhhCCCC----C
Confidence 56899999999999994 999999987 48999999999999999999999999999999 999999999765 3
Q ss_pred CCCcEEEEEEEccceeec
Q 016518 140 PNSVVQFEVELVSWITVV 157 (388)
Q Consensus 140 ~~~~l~~~i~l~~~~~~~ 157 (388)
+|.++.|+|+|+++....
T Consensus 227 ag~~~~F~V~v~~v~~~~ 244 (432)
T 1w26_A 227 KGKAAKFAINLKKVEERE 244 (432)
T ss_dssp SSCEEEEEEECCEECCEE
T ss_pred CCceEEEEEEEEEEeccC
Confidence 689999999999887543
No 76
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.08 E-value=8e-11 Score=114.13 Aligned_cols=98 Identities=21% Similarity=0.460 Sum_probs=79.0
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCCC
Q 016518 60 DTPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLP 139 (388)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~ip 139 (388)
..++.||.|++||+++ .||+.|+++. +.|+.|.+|.|+++|||+.+|.||++|+++.|++.+|.+ |+..+ .
T Consensus 159 ~~~~~gD~V~i~y~g~-~dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~d--y~~~~----l 229 (392)
T 1t11_A 159 EAAENGKRVSIDFVGS-IDGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPED--YHAEN----L 229 (392)
T ss_dssp CCCCTTCEEEEEEEEE-SSSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTT--CSCTT----T
T ss_pred CCCCCCCEEEEEEEEE-ECCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccc--cccCC----C
Confidence 4689999999999998 5999999984 479999999999999999999999999999994444554 55443 2
Q ss_pred CCCcEEEEEEEccceeecccCcCccce
Q 016518 140 PNSVVQFEVELVSWITVVDLSKDGGIV 166 (388)
Q Consensus 140 ~~~~l~~~i~l~~~~~~~dv~~d~~v~ 166 (388)
+|.++.|+|+|+.+....-..-|..+.
T Consensus 230 aGk~~~F~V~v~~i~~~~lpeldDEfa 256 (392)
T 1t11_A 230 KGKAAKFAIKVNKVEARELPELNDEFV 256 (392)
T ss_dssp SSCEEEECCCEEEEEEEECCCCSTGGG
T ss_pred CCCeEEEEEEEEEEEcCCCCCcCHHHH
Confidence 789999999999987644333333333
No 77
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.91 E-value=2.6e-09 Score=104.90 Aligned_cols=77 Identities=10% Similarity=0.194 Sum_probs=66.9
Q ss_pred eEEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEE
Q 016518 214 VSYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYY 293 (388)
Q Consensus 214 v~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f 293 (388)
+||+|+. ||+.|+++ + +.|+.|.+|.++++|||+.+|.+|++|++..|.+|+..+||..+. +|.+++|
T Consensus 166 i~y~g~~-dG~~fd~~-~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l--------ag~~~~F 233 (432)
T 1w26_A 166 IDFTGSV-DGEEFEGG-K--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL--------KGKAAKF 233 (432)
T ss_dssp ECEEEES-SSCBCSSC-C--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT--------SSCEEEE
T ss_pred EEEEEee-CCeEccCC-C--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC--------CCceEEE
Confidence 3455653 78888887 3 689999999999999999999999999999999999999997543 5789999
Q ss_pred EEEEeeeec
Q 016518 294 EVEMMDFIK 302 (388)
Q Consensus 294 ~veL~~~~~ 302 (388)
+|+|+++..
T Consensus 234 ~V~v~~v~~ 242 (432)
T 1w26_A 234 AINLKKVEE 242 (432)
T ss_dssp EEECCEECC
T ss_pred EEEEEEEec
Confidence 999999975
No 78
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.78 E-value=8.9e-09 Score=86.45 Aligned_cols=77 Identities=18% Similarity=0.294 Sum_probs=64.1
Q ss_pred chhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC---CCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE---DGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 311 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~---~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
++++++.+..++..||.+|+.|+|..|+..|++|+.+++. ....+++++..+......+|+|+|.||+++++|.+|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 5788999999999999999999999999999999998743 1223455667778889999999999999999999986
No 79
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.73 E-value=4.9e-08 Score=84.72 Aligned_cols=98 Identities=28% Similarity=0.309 Sum_probs=74.2
Q ss_pred eEEEEEEEeeeecCcCccccCchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChH-HHHHHHHHHHH
Q 016518 290 KLYYEVEMMDFIKEKVPWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDD-EQKLVKSLRVS 368 (388)
Q Consensus 290 ~l~f~veL~~~~~~~~~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~-~~~~~~~~~~~ 368 (388)
.......+..++..++.|.|+.+++...+..++..|+.+|+.|+|.+|+..|.+|+.+.+........ .......+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 89 (198)
T 2fbn_A 10 HSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEIS 89 (198)
T ss_dssp ------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHH
Confidence 44455677889999999999999999999999999999999999999999999999987664433322 23334566789
Q ss_pred hhhHHHHHHHHccCchhhh
Q 016518 369 CWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 369 ~~~NlA~c~lKl~~~~~ai 387 (388)
++.|+|.|++++++|.+|+
T Consensus 90 ~~~~la~~~~~~~~~~~A~ 108 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAI 108 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999986
No 80
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.64 E-value=1.9e-08 Score=97.43 Aligned_cols=76 Identities=9% Similarity=0.189 Sum_probs=61.9
Q ss_pred EEEEeecCceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEE
Q 016518 215 SYIARLEDGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYE 294 (388)
Q Consensus 215 ~y~g~~~dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ 294 (388)
||.|+. ||+.|+++ .+.|+.|.+|.++++|||+.+|.+|++|++..|.++....||..+. +|.+++|+
T Consensus 170 ~y~g~~-dG~~fd~~---~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l--------aGk~~~F~ 237 (392)
T 1t11_A 170 DFVGSI-DGVEFEGG---KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL--------KGKAAKFA 237 (392)
T ss_dssp EEEEES-SSSCCTTC---EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT--------SSCEEEEC
T ss_pred EEEEEE-CCEEccCC---CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC--------CCCeEEEE
Confidence 344542 67777766 3579999999999999999999999999999999974456775332 67899999
Q ss_pred EEEeeeec
Q 016518 295 VEMMDFIK 302 (388)
Q Consensus 295 veL~~~~~ 302 (388)
|+|++|..
T Consensus 238 V~v~~i~~ 245 (392)
T 1t11_A 238 IKVNKVEA 245 (392)
T ss_dssp CCEEEEEE
T ss_pred EEEEEEEc
Confidence 99999986
No 81
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.55 E-value=1.3e-07 Score=79.51 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=60.0
Q ss_pred cCchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhhC
Q 016518 309 MNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIRL 388 (388)
Q Consensus 309 l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai~ 388 (388)
|.|-.....|..++..||.+|+.|+|++|+.+|++||++.+..+... ..........+|+|++.|+.++++|++|+.
T Consensus 2 ~~~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~ 78 (159)
T 2hr2_A 2 MKPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALH 78 (159)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHH
Confidence 44445577899999999999999999999999999999887633211 001122445699999999999999999973
No 82
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.49 E-value=2.4e-07 Score=74.75 Aligned_cols=59 Identities=25% Similarity=0.377 Sum_probs=52.5
Q ss_pred HHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 314 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+.|...|..||.+|+.|+|++|+..|++|+.+.+.. ..+|+|+|.||+++++|++|+
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~---------------~~~~~nlg~~~~~~~~~~~A~ 62 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN---------------ITFYNNKAAVYFEEKKFAECV 62 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHhHHHHHHHhhhHHHHH
Confidence 45678889999999999999999999999999865432 578999999999999999997
No 83
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.38 E-value=5.9e-07 Score=72.39 Aligned_cols=57 Identities=37% Similarity=0.532 Sum_probs=45.3
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.|+.++..||.+|+.|+|++|+..|++|+.+-+.. ..+|.|+|.|++++++|++|+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~~~~~~~~~~~~~~A~ 67 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN---------------AILYSNRAACLTKLMEFQRAL 67 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHhhHHHhhccHHHHH
Confidence 468889999999999999999999999999865432 356666777777777766665
No 84
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.11 E-value=2.6e-06 Score=81.89 Aligned_cols=78 Identities=31% Similarity=0.436 Sum_probs=64.4
Q ss_pred CchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCC-CCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 310 ~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~-~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.++.+..+..++..|+.+|+.|+|++|+..|++|+++++... ....++...+......+|+|+|.||+++++|++|+
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 293 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAV 293 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 4788999999999999999999999999999999999765421 11223333456778899999999999999999986
No 85
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.83 E-value=3.4e-05 Score=61.03 Aligned_cols=56 Identities=25% Similarity=0.313 Sum_probs=44.1
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|+.+|+.|+|.+|+..|++|+...+.. ..++.|+|.|++++++|++|+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~a~~~~~~~~~~~A~ 58 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAI 58 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhcCHHHHH
Confidence 56788899999999999999999999999865432 356667777777777776665
No 86
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.78 E-value=3e-05 Score=75.98 Aligned_cols=86 Identities=12% Similarity=0.078 Sum_probs=68.0
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCCeEEeeCCCcccccHHHHhcccccCceEEEEEEcCCCCCCCCCCCCCCCC
Q 016518 61 TPEFGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKLGTGQVATGLDNGIITMKKRECAVFTFTLPSELRFGVEGRDSLPP 140 (388)
Q Consensus 61 ~~~~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~lg~~~~~~g~~~~l~~m~~Ge~~~v~~~vp~~~~yg~~~~~~ip~ 140 (388)
.++.||.|+|+|+++ .||..|+++.. .++.|.+|++. + |+.+|.||++|++..|++++ +
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF---------------a 212 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY---------------E 212 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE---------------T
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee---------------C
Confidence 578999999999987 59999998753 68888999887 3 99999999999999995433 4
Q ss_pred CCcEEEEEEEccceeecccCcCcccee
Q 016518 141 NSVVQFEVELVSWITVVDLSKDGGIVK 167 (388)
Q Consensus 141 ~~~l~~~i~l~~~~~~~dv~~d~~v~k 167 (388)
|....|.|.+..+....-..-|..+.+
T Consensus 213 Gk~a~F~VtV~~Ik~~~lPEldDEfak 239 (433)
T 3gty_X 213 GKKYTYKLEVEEVYKRTLPEIGDELAK 239 (433)
T ss_dssp TEEEEEEEEEEEEEEECCCCSSHHHHH
T ss_pred CCeEEEEEEEEEEEEecCCcccHHHHH
Confidence 678899999998876544333434433
No 87
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.67 E-value=5.6e-05 Score=57.79 Aligned_cols=56 Identities=29% Similarity=0.432 Sum_probs=47.5
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|+.+|+.|+|.+|+..|++|+...+.. ..++.|+|.|++++++|++|+
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 58 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN---------------PVGYSNKAMALIKLGEYTQAI 58 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHH
Confidence 35667889999999999999999999999865432 467889999999999999886
No 88
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.45 E-value=0.00023 Score=59.11 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=43.5
Q ss_pred HHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 315 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...+..+...|+.+|+.|+|.+|+..|++|+.+.+.. ..++.|++.||+++++|++|+
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~ 65 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN---------------PIYLSNRAAAYSASGQHEKAA 65 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC---------------HHHHHHHHHHHHHccCHHHHH
Confidence 3567788899999999999999999999999865432 345566666666666666654
No 89
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.36 E-value=0.00035 Score=53.89 Aligned_cols=62 Identities=15% Similarity=0.036 Sum_probs=49.4
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+-+.|+.+|+.++|..|+..|++|++..+...... ..+..++.|+|.|+.+++++..|+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~--------~~~~~i~~~L~~~~~~~g~~~~A~ 66 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIST--------IDKVSVLDYLSYAVYQQGDLDKAL 66 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCS--------SCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCc--------ccHHHHHHHHHHHHHHccCHHHHH
Confidence 34556789999999999999999999999875432111 123578899999999999999986
No 90
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.18 E-value=0.00069 Score=53.73 Aligned_cols=55 Identities=31% Similarity=0.381 Sum_probs=37.6
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|+.+|+.|+|..|+..|++|+...+.. ..++.|+|.|++++++|++|+
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~ 63 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---------------AVYYTNRALCYLKMQQPEQAL 63 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc---------------HHHHHHHHHHHHHhcCHHHHH
Confidence 5567788888999999999999999998865432 234555555555555555543
No 91
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.15 E-value=0.00082 Score=55.70 Aligned_cols=31 Identities=10% Similarity=-0.002 Sum_probs=21.6
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+..+...|..+|+.|+|.+|+..|++|+.+-
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 66 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD 66 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4455666777777777777777777777654
No 92
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.15 E-value=0.0011 Score=54.15 Aligned_cols=62 Identities=24% Similarity=0.280 Sum_probs=46.0
Q ss_pred chhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 311 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+..+.+..+...|+.++..|+|..|+..|.+|+...+.. ..++.|+|.|++++++|.+|+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~ 67 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYAL 67 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHH
Confidence 46678899999999999999999999999999999865432 234455555555555555543
No 93
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.14 E-value=0.00088 Score=50.85 Aligned_cols=54 Identities=9% Similarity=0.031 Sum_probs=46.3
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+-..|..+++.|+|.+|+..|++|++.-+.. ...|.|+|.||.++++|++|+
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~ 61 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVETDPDY---------------VGTYYHLGKLYERLDRTDDAI 61 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------THHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 345578999999999999999999999865443 358899999999999999986
No 94
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.13 E-value=0.00079 Score=55.79 Aligned_cols=54 Identities=15% Similarity=0.160 Sum_probs=46.8
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.-....|.-+++.|+|.+|+..|++|+.+-+.. ...+.|++.||++++++++|+
T Consensus 71 ~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~---------------~~~~~~lg~~~~~lg~~~eA~ 124 (151)
T 3gyz_A 71 DYIMGLAAIYQIKEQFQQAADLYAVAFALGKND---------------YTPVFHTGQCQLRLKAPLKAK 124 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC---------------CHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC---------------cHHHHHHHHHHHHcCCHHHHH
Confidence 345567999999999999999999999976554 367899999999999999986
No 95
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.04 E-value=0.0012 Score=52.71 Aligned_cols=59 Identities=34% Similarity=0.452 Sum_probs=46.2
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|+.+++.|+|.+|+..|+++++..+. ......++.|+|.|++++++|++|+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~------------~~~~~~~~~~~a~~~~~~~~~~~A~ 85 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT------------PQDQAVLHRNRAACHLKLEDYDKAE 85 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc------------chHHHHHHHHHHHHHHHHccHHHHH
Confidence 3566778899999999999999999999985432 1224567788888888888888775
No 96
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.95 E-value=0.0011 Score=49.65 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=44.0
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHH-hhhHHHHHHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVS-CWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~-~~~NlA~c~lKl~~~~~ai 387 (388)
-..|..+++.|+|.+|+..|++++..-+.. .. ++.|+|.|+.++++|++|+
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~lg~~~~~~~~~~~A~ 55 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG---------------KDEAYYLMGNAYRKLGDWQKAL 55 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST---------------HHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHHcCCHHHHH
Confidence 457899999999999999999999864432 34 8899999999999999986
No 97
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.93 E-value=0.0014 Score=49.83 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=23.7
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
.+..+...|+.++..|+|..|+..|.+++...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 35 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDP 35 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC
Confidence 355666777777778888888888888777543
No 98
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.90 E-value=0.0025 Score=46.38 Aligned_cols=55 Identities=27% Similarity=0.415 Sum_probs=46.1
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|..+++.++|.+|+..|++|+...+.. ...+.|+|.|+.++++|++|+
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~ 63 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAI 63 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHHhhHHHHH
Confidence 4556678999999999999999999999864332 356789999999999999886
No 99
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.86 E-value=0.0022 Score=49.62 Aligned_cols=56 Identities=30% Similarity=0.408 Sum_probs=48.6
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|+.++..|+|..|+..|.+++...+.. ..++.|+|.|++++++|++|+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~ 58 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCR 58 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHH
Confidence 46677889999999999999999999999865332 467899999999999999986
No 100
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.85 E-value=0.0023 Score=49.70 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=48.0
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+.-+...|.-+++.|+|.+|+..|++|+...+.. ..++.|++.|+.++++|++|+
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH---------------QALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------hHHHHHHHHHHHHcCCHHHHH
Confidence 34556778999999999999999999999875442 467899999999999999986
No 101
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.76 E-value=0.0024 Score=52.27 Aligned_cols=54 Identities=9% Similarity=-0.068 Sum_probs=36.9
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...-..|+-+|+.|+|++|+..|++|+++-+.. ...|.|++.||.++++|++|+
T Consensus 32 ~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~~~~~~A~ 85 (150)
T 4ga2_A 32 IKGFYFAKLYYEAKEYDLAKKYICTYINVQERD---------------PKAHRFLGLLYELEENTDKAV 85 (150)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCchHHHH
Confidence 334456888888888999998888888864432 345566666666666666554
No 102
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.73 E-value=0.0031 Score=50.80 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=21.7
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+..+...|..+++.|+|.+|+..|++++..-
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~ 48 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLD 48 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhC
Confidence 3445566777777788888888887777654
No 103
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.73 E-value=0.0031 Score=51.62 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=21.6
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+..+...|..+++.|+|.+|+..|++|+..-
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~ 51 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLD 51 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcC
Confidence 3445566777777777777777777777654
No 104
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.73 E-value=0.0029 Score=50.27 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=46.8
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.-+...|.-+++.|+|.+|+..|++|+.+-+.. ...|.|++.|+.++++|++|+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~~~~~~A~ 101 (126)
T 4gco_A 47 AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF---------------IKGYIRKAACLVAMREWSKAQ 101 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh---------------hHHHHHHHHHHHHCCCHHHHH
Confidence 3445678999999999999999999999864332 467999999999999999986
No 105
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.72 E-value=0.0035 Score=49.77 Aligned_cols=62 Identities=13% Similarity=0.063 Sum_probs=50.1
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.-+...|.-+++.|+|.+|+..|.+|+.+.+..... ......+|.|++.|+.++++|++|+
T Consensus 42 ~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~a~~~~~lg~~~~~~~~~~~A~ 103 (127)
T 4gcn_A 42 ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD--------YKLIAKAMSRAGNAFQKQNDLSLAV 103 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC--------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh--------hHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3445678999999999999999999999976543211 2345678999999999999999987
No 106
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.72 E-value=0.0013 Score=64.88 Aligned_cols=67 Identities=19% Similarity=0.256 Sum_probs=56.1
Q ss_pred ccccCchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchh
Q 016518 306 PWEMNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQG 385 (388)
Q Consensus 306 ~~~l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ 385 (388)
...++.+++...+..+...|+.+|+.|+|.+|+..|++|+...+.. ..++.|+|.|++++++|++
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~ 77 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNE---------------PVFYSNISACYISTGDLEK 77 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCC---------------cHHHHHHHHHHHHcCCHHH
Confidence 4567888999999999999999999999999999999999865432 4677888888888888887
Q ss_pred hh
Q 016518 386 IR 387 (388)
Q Consensus 386 ai 387 (388)
|+
T Consensus 78 A~ 79 (537)
T 3fp2_A 78 VI 79 (537)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 107
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.70 E-value=0.002 Score=53.98 Aligned_cols=54 Identities=13% Similarity=0.134 Sum_probs=45.3
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.-+-..|+.+++.|+|++|+..|++|++.-+.. ...+.++|.||.++++|++|+
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~~~~~~a~ 59 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN---------------VETLLKLGKTYMDIGLPNDAI 59 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCCCHHHHH
Confidence 345678999999999999999999999864432 467889999999999998886
No 108
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.0025 Score=62.17 Aligned_cols=59 Identities=31% Similarity=0.401 Sum_probs=46.7
Q ss_pred hHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 313 GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 313 e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
++.+.+..+...|+.+|+.|+|.+|+..|++++...+. ..++.|+|.|++++++|++|+
T Consensus 1 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~la~~~~~~g~~~~A~ 59 (514)
T 2gw1_A 1 EKDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED----------------PVFYSNLSACYVSVGDLKKVV 59 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred CcchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc----------------HHHHHhHHHHHHHHhhHHHHH
Confidence 46778999999999999999999999999999986531 245666666666666666664
No 109
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.64 E-value=0.0049 Score=47.50 Aligned_cols=37 Identities=32% Similarity=0.322 Sum_probs=27.6
Q ss_pred hhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 312 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+.....+..+...|+.++..|+|..|+..|.+++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 42 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELN 42 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 3444566777778888888888888888888888754
No 110
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=96.60 E-value=0.0029 Score=49.28 Aligned_cols=32 Identities=34% Similarity=0.417 Sum_probs=24.6
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
.+..+...|+.+++.|+|..|+..|.+++...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 46 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRN 46 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 35566677888888888888888888888754
No 111
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.53 E-value=0.0042 Score=51.93 Aligned_cols=53 Identities=9% Similarity=-0.027 Sum_probs=45.5
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.....|.-+++.|+|++|+..|+++++.-+.. ..++.|+|.||.++++|++|+
T Consensus 109 ~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 161 (184)
T 3vtx_A 109 AYYKLGLVYDSMGEHDKAIEAYEKTISIKPGF---------------IRAYQSIGLAYEGKGLRDEAV 161 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHhcchh---------------hhHHHHHHHHHHHCCCHHHHH
Confidence 35567999999999999999999999865432 467899999999999999987
No 112
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.52 E-value=0.0045 Score=51.71 Aligned_cols=69 Identities=19% Similarity=0.140 Sum_probs=46.3
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCCh------------HHHHHHHHHHHHhhhHHHHHHHHccCch
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD------------DEQKLVKSLRVSCWLNSAACCLKLKDYQ 384 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~------------~~~~~~~~~~~~~~~NlA~c~lKl~~~~ 384 (388)
.+..+--.|+.+|.+++|.+|...|++||.+......... ....... -+.+...+|.||++++++.
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~--e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPS--EIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCC--HHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccc--hHHHHHHHHHHHHHHCCHH
Confidence 3445566799999999999999999999987753211100 0000000 1234566999999999999
Q ss_pred hhh
Q 016518 385 GIR 387 (388)
Q Consensus 385 ~ai 387 (388)
+||
T Consensus 140 ~Ai 142 (167)
T 3ffl_A 140 DAI 142 (167)
T ss_dssp HHH
T ss_pred HHH
Confidence 997
No 113
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.52 E-value=0.0046 Score=50.51 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=44.9
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
....|.-+++.|+|.+|+..|++|+.+-+.. ...+.|++.|+++++++++|+
T Consensus 58 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 109 (148)
T 2vgx_A 58 FLGLGACRQAMGQYDLAIHSYSYGAVMDIXE---------------PRFPFHAAECLLQXGELAEAE 109 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------THHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---------------chHHHHHHHHHHHcCCHHHHH
Confidence 4567889999999999999999999875543 367899999999999999986
No 114
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.51 E-value=0.0048 Score=49.68 Aligned_cols=52 Identities=25% Similarity=0.245 Sum_probs=44.8
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
....|.-+++.|+|.+|+..|++|+.+-+.. ...+.|++.|++++++|++|+
T Consensus 55 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 106 (142)
T 2xcb_A 55 FLGLGACRQSLGLYEQALQSYSYGALMDINE---------------PRFPFHAAECHLQLGDLDGAE 106 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------THHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---------------cHHHHHHHHHHHHcCCHHHHH
Confidence 4567888999999999999999999975543 357899999999999999986
No 115
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.0052 Score=48.00 Aligned_cols=54 Identities=19% Similarity=0.168 Sum_probs=46.5
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.-+...|.-+++.|+|.+|+..|++|+.+-+.. ...+.|+|.|+.++++|++|+
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~ 92 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF---------------VRAYIRKATAQIAVKEYASAL 92 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHHhCHHHHH
Confidence 446678999999999999999999999865432 467899999999999999986
No 116
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=96.46 E-value=0.0045 Score=60.42 Aligned_cols=58 Identities=16% Similarity=0.115 Sum_probs=46.6
Q ss_pred CceEEeecCCCCCCCeEEEccCCcccchHHHHHccccCCcEEEEEecCCCCCCCcccccCCCCCCCCCeEEEEEEEeeee
Q 016518 222 DGTVFEKKGYDGEQPLEFITDEEQVIAGLDRVAATMKKEEWAIVTINHEYGFGNVEAKRDLATIPSCAKLYYEVEMMDFI 301 (388)
Q Consensus 222 dg~~fd~s~~~~~~p~~f~lG~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~veL~~~~ 301 (388)
||..|+++ .+.++.|.+|.+. + |+.+|.+|++|+...|.+.- +|.+..|.|+|.+|.
T Consensus 170 dG~~~~~~---~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-----------------aGk~a~F~VtV~~Ik 226 (433)
T 3gty_X 170 EEGKKLTS---REYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-----------------EGKKYTYKLEVEEVY 226 (433)
T ss_dssp TTSCEEEE---EEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE-----------------TTEEEEEEEEEEEEE
T ss_pred CCEECcCC---CCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee-----------------CCCeEEEEEEEEEEE
Confidence 56667765 2367888888877 4 99999999999999998832 356899999999998
Q ss_pred c
Q 016518 302 K 302 (388)
Q Consensus 302 ~ 302 (388)
.
T Consensus 227 ~ 227 (433)
T 3gty_X 227 K 227 (433)
T ss_dssp E
T ss_pred E
Confidence 5
No 117
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.35 E-value=0.0039 Score=46.75 Aligned_cols=54 Identities=17% Similarity=0.248 Sum_probs=38.0
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHc-cCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL-KDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl-~~~~~ai 387 (388)
+...|.-+++.|+|++|+..|++++...+. . ....++.|+|.|+.++ +++++|+
T Consensus 43 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~--~-----------~~~~~~~~l~~~~~~~~~~~~~A~ 97 (112)
T 2kck_A 43 WLMKGKALYNLERYEEAVDCYNYVINVIED--E-----------YNKDVWAAKADALRYIEGKEVEAE 97 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCC--T-----------TCHHHHHHHHHHHTTCSSCSHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCcc--c-----------chHHHHHHHHHHHHHHhCCHHHHH
Confidence 445677777778888888888887765432 0 0135678888888888 8888875
No 118
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.31 E-value=0.0076 Score=46.32 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=45.5
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|..+++.|+|.+|+..|++|+..-+.. ...+.|+|.|+.+++++++|+
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~ 73 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY---------------SVAWKWLGKTLQGQGDRAGAR 73 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 345577899999999999999999999864432 457799999999999999986
No 119
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.30 E-value=0.0072 Score=49.76 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=46.5
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.-+...|.-+++.|+|.+|+..|++|+.+-+.. ...+.|++.||.++++|++|+
T Consensus 46 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 99 (164)
T 3sz7_A 46 IYLSNRAAAYSASGQHEKAAEDAELATVVDPKY---------------SKAWSRLGLARFDMADYKGAK 99 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHccCHHHHH
Confidence 345678999999999999999999999865432 578899999999999999986
No 120
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.29 E-value=0.0051 Score=51.34 Aligned_cols=67 Identities=18% Similarity=0.051 Sum_probs=48.4
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhhC
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIRL 388 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai~ 388 (388)
+...-..|..+.+.|+|++|+..|.+||.+++.....+++. ....+..+.|++.|+.++++|++|++
T Consensus 57 a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~----~~A~~~~~~~rG~aL~~lgr~eEAl~ 123 (159)
T 2hr2_A 57 AFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDE----GKLWISAVYSRALALDGLGRGAEAMP 123 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTH----HHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCch----HHHHHHHHHhHHHHHHHCCCHHHHHH
Confidence 34677889999999999999999999999733211112111 11112334999999999999999973
No 121
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=96.29 E-value=0.0068 Score=52.63 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=25.7
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
..+...|+.+|+.|+|.+|+..|.+|+...+
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~ 38 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTN 38 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccC
Confidence 4566788899999999999999999998654
No 122
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.28 E-value=0.0063 Score=47.80 Aligned_cols=29 Identities=17% Similarity=0.193 Sum_probs=22.6
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
.-..|..+++.|+|.+|+..|++|+..-+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P 48 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEP 48 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 34567888888888888888888887544
No 123
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.26 E-value=0.0075 Score=54.95 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=51.7
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+.-+...|+-++..|+|++|+..|.+|+..+..... . ......++.|++.||.++++|++|+
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~-~-------~~~~~~~~~nlg~~y~~~~~y~~A~ 216 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-N-------EEFDVKVRYNHAKALYLDSRYEESL 216 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC-C-------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc-c-------hhHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4556778899999999999999999999987754321 1 3355779999999999999999986
No 124
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.22 E-value=0.009 Score=44.65 Aligned_cols=52 Identities=23% Similarity=0.377 Sum_probs=44.0
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+...|..+++.|+|.+|+..|.+++...+.. ...+.|+|.|+.++++|++|+
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~ 60 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEE---------------SKYWLMKGKALYNLERYEEAV 60 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHccCHHHHH
Confidence 3457888999999999999999999975432 356789999999999999885
No 125
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.19 E-value=0.0074 Score=46.97 Aligned_cols=54 Identities=6% Similarity=0.003 Sum_probs=32.0
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...|.-+++.|+|.+|+..|.+++...+... .....+.++|.|+.+++++++|+
T Consensus 43 ~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~------------~~~~~~~~la~~~~~~g~~~~A~ 96 (129)
T 2xev_A 43 YWLGESYYATRNFQLAEAQFRDLVSRYPTHD------------KAAGGLLKLGLSQYGEGKNTEAQ 96 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTST------------THHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHCCCCc------------ccHHHHHHHHHHHHHcCCHHHHH
Confidence 3445555555666666666666555432211 12456777888888888887775
No 126
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.17 E-value=0.0091 Score=54.38 Aligned_cols=63 Identities=11% Similarity=0.053 Sum_probs=47.8
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|+-++..|+|.+|+..|.+|+.+.+..+.. ..+...++.|+|.||.++++|++|+
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al 216 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESL 216 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHH
Confidence 35567788999999999999999999999876543211 1222467788888888888888876
No 127
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=96.01 E-value=0.012 Score=48.24 Aligned_cols=55 Identities=5% Similarity=-0.008 Sum_probs=47.1
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.-+-..|.-+++.|+|..|+..|.+|+.+-+.. ...|.++|.||.++++|++|+
T Consensus 63 ~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~~g~~~~~~g~~~~A~ 117 (162)
T 3rkv_A 63 IPLYANMSQCYLNIGDLHEAEETSSEVLKREETN---------------EKALFRRAKARIAAWKLDEAE 117 (162)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc---------------hHHHHHHHHHHHHHhcHHHHH
Confidence 4456678999999999999999999999864332 578999999999999999986
No 128
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=95.93 E-value=0.015 Score=45.61 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=46.1
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.-+...|.-+++.|+|..|+..|.+|+...+.. ...+.|+|.|+.++++|++|+
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~~~~~~A~ 97 (137)
T 3q49_B 44 VYYTNRALCYLKMQQPEQALADCRRALELDGQS---------------VKAHFFLGQCQLEMESYDEAI 97 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHHhhHHHHH
Confidence 345667899999999999999999999865432 468899999999999999986
No 129
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.91 E-value=0.014 Score=47.54 Aligned_cols=55 Identities=15% Similarity=0.044 Sum_probs=46.3
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+++.|+|.+|+..|++|+++-+.. ..++.|+|.++++++++.+|+
T Consensus 65 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~~~~~~aa 119 (150)
T 4ga2_A 65 PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQ---------------KDLVLKIAELLCKNDVTDGRA 119 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHCSSSSHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCChHHHH
Confidence 4456678999999999999999999999865442 467899999999999998764
No 130
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.89 E-value=0.0036 Score=61.89 Aligned_cols=20 Identities=15% Similarity=0.257 Sum_probs=13.1
Q ss_pred HhhhHHHHHHHHccCchhhh
Q 016518 368 SCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 368 ~~~~NlA~c~lKl~~~~~ai 387 (388)
..+.|+|.||.++++|++|+
T Consensus 75 ~~~~~lg~~~~~~g~~~eA~ 94 (477)
T 1wao_1 75 KGYYRRAASNMALGKFRAAL 94 (477)
T ss_dssp HHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH
Confidence 45666677777777666664
No 131
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=95.89 E-value=0.013 Score=52.02 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=48.7
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+-..|..+|+.|+|.+|+..|++++...+... .....+.++|.||+++++|.+|+
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~------------~~~~a~~~lg~~~~~~~~~~~A~ 72 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHE------------WAADAQFYLARAYYQNKEYLLAA 72 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCST------------THHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCc------------chHHHHHHHHHHHHHhCcHHHHH
Confidence 45667889999999999999999999998665421 23567899999999999999986
No 132
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.87 E-value=0.013 Score=45.41 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=47.3
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+-..|..+++.|+|.+|+..|.+++...+.... ....+.+++.|++++++|++|+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~------------~~~~~~~lg~~~~~~~~~~~A~ 59 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY------------TPNALYWLGESYYATRNFQLAE 59 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT------------HHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc------------cHHHHHHHHHHHHHhccHHHHH
Confidence 4556789999999999999999999998877662 2367789999999999999885
No 133
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=95.81 E-value=0.012 Score=61.26 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=22.9
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
.+..+...|+-+++.|+|++|+..|++|+++-
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~ 39 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVF 39 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45566667777777777777777777777754
No 134
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=95.81 E-value=0.012 Score=46.21 Aligned_cols=54 Identities=15% Similarity=-0.045 Sum_probs=45.5
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
......|.-++..|++.+|+..|++|+.+-+.. ...+.|++.|+.+++++++|+
T Consensus 52 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~---------------~~~~~~la~~~~~~g~~~~A~ 105 (121)
T 1hxi_A 52 EAWRSLGLTQAENEKDGLAIIALNHARMLDPKD---------------IAVHAALAVSHTNEHNANAAL 105 (121)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 345567889999999999999999999865432 457799999999999999886
No 135
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=95.76 E-value=0.019 Score=45.69 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=19.6
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
.+..+...|..++..|+|.+|+..|.+|+.+.+
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~ 40 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK 40 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 444555556666666666666666666665543
No 136
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=95.74 E-value=0.017 Score=49.20 Aligned_cols=54 Identities=7% Similarity=0.017 Sum_probs=42.1
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|..+++.|+|.+|+..|.+|+...+.. ...+.|+|.|++++++|++|+
T Consensus 38 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~lg~~~~~~~~~~~A~ 91 (213)
T 1hh8_A 38 RICFNIGCMYTILKNMTEAEKAFTRSINRDKHL---------------AVAYFQRGMLYYQTEKYDLAI 91 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHcccHHHHH
Confidence 345667888888888888888888888754321 467889999999999999886
No 137
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.71 E-value=0.019 Score=44.37 Aligned_cols=54 Identities=15% Similarity=0.066 Sum_probs=45.1
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|.-++..++|.+|+..|.+|+...+.. ..++.|+|.|++++++|++|+
T Consensus 51 ~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~ 104 (133)
T 2lni_A 51 KLYSNRAACYTKLLEFQLALKDCEECIQLEPTF---------------IKGYTRKAAALEAMKDYTKAM 104 (133)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------hHHHHHHHHHHHHHhhHHHHH
Confidence 345667888999999999999999999864432 467899999999999999886
No 138
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=95.70 E-value=0.024 Score=45.08 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=42.0
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|..++..|+|.+|+..|.+|+.+.+.... ......++.|+|.|+..+++|++|+
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~ 109 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAI 109 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---------cHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 445667888999999999999999999987754321 1223455666666666666666654
No 139
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=95.66 E-value=0.017 Score=50.29 Aligned_cols=57 Identities=9% Similarity=0.020 Sum_probs=46.3
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+-..|..+|+.|+|.+|+..|.+++...+... .....+.+++.|+.++++|++|+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~------------~~~~a~~~lg~~~~~~~~~~~A~ 61 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGP------------YSQQVQLDLIYAYYKNADLPLAQ 61 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST------------THHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh------------HHHHHHHHHHHHHHhcCCHHHHH
Confidence 4456778999999999999999999998654422 12357789999999999999987
No 140
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.61 E-value=0.028 Score=42.61 Aligned_cols=27 Identities=33% Similarity=0.492 Sum_probs=15.7
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADC 347 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~ 347 (388)
+...|..++..|+|..|+..|.+++..
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~ 38 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL 38 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555556666666666666666554
No 141
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=95.56 E-value=0.014 Score=43.04 Aligned_cols=68 Identities=18% Similarity=0.079 Sum_probs=47.8
Q ss_pred cCchh-HHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCC-CCChHHHHHHHHHHHHhhhHHHHH
Q 016518 309 MNNQG-KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SFVDDEQKLVKSLRVSCWLNSAAC 376 (388)
Q Consensus 309 l~~~e-~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~-~~~~~~~~~~~~~~~~~~~NlA~c 376 (388)
|+..+ .+..|..+-.+|.++=+.|+|++|+.+|..|+.+|.... ...++..+..-..++.=|.++|.-
T Consensus 1 M~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RAE~ 70 (83)
T 2v6y_A 1 MSAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRISY 70 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45556 778999999999999999999999999999999985310 011222333445556666666643
No 142
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=95.52 E-value=0.023 Score=48.96 Aligned_cols=50 Identities=18% Similarity=0.130 Sum_probs=43.7
Q ss_pred HHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 323 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..|.-+++.|+|.+|+..|++|+..-+.. ...+.|++.|++++++|++|+
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 108 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPNN---------------VDCLEACAEMQVCRGQEKDAL 108 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 47999999999999999999999865442 477899999999999999886
No 143
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.49 E-value=0.028 Score=42.19 Aligned_cols=53 Identities=17% Similarity=0.140 Sum_probs=44.6
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
-+...|.-+++.|+|..|+..|.+++...+.. ..++.|+|.|+.++++|++|+
T Consensus 40 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~ 92 (118)
T 1elw_A 40 LYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW---------------GKGYSRKAAALEFLNRFEEAK 92 (118)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHHhhHHHHH
Confidence 45567888899999999999999999865432 467899999999999999886
No 144
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.42 E-value=0.032 Score=44.08 Aligned_cols=55 Identities=18% Similarity=0.151 Sum_probs=46.4
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...+...|.-+++.++|.+|+..|.+++...+.. ..++.|+|.|+.++++|++|+
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~ 119 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD---------------VKALYRRSQALEKLGRLDQAV 119 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 4556677888999999999999999999864432 467889999999999999886
No 145
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=95.36 E-value=0.036 Score=42.47 Aligned_cols=60 Identities=13% Similarity=0.211 Sum_probs=47.6
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+...|.-++..|+|.+|+..|.+++...+..... ......++.|+|.|+.++++|++|+
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~ 99 (131)
T 1elr_A 40 YITNQAAVYFEKGDYNKCRELCEKAIEVGRENRED--------YRQIAKAYARIGNSYFKEEKYKDAI 99 (131)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhccccchh--------HHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34567888999999999999999999976542211 1233678899999999999999986
No 146
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=95.35 E-value=0.027 Score=51.75 Aligned_cols=60 Identities=12% Similarity=0.097 Sum_probs=39.7
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+.+ |+|.+|+..|++|+.+.+.... ......+++|++.+|.++++|++|+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~ 175 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAA 175 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4455566666666 8888888888888876643210 1223566777777777777777775
No 147
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=95.34 E-value=0.029 Score=47.54 Aligned_cols=55 Identities=11% Similarity=0.049 Sum_probs=46.8
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+++.|+|.+|+..|.+|+.+.+.. ..++.|+|.||.++++|++|+
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~ 142 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN---------------VKALYKLGVANMYFGFLEEAK 142 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHcccHHHHH
Confidence 4566778999999999999999999999874332 467899999999999999886
No 148
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.32 E-value=0.029 Score=51.10 Aligned_cols=63 Identities=17% Similarity=0.157 Sum_probs=48.8
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.+..+...|+.+...|+|.+|+..|.+|+.+..... + .......|.|++.||.++++|++|+
T Consensus 35 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~--~-------~~~~a~~~~~lg~~~~~~g~~~~A~ 97 (292)
T 1qqe_A 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAG--N-------EDEAGNTYVEAYKCFKSGGNSVNAV 97 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--C-------HHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4455566678888889999999999999998764321 1 1123678899999999999999986
No 149
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.31 E-value=0.035 Score=55.02 Aligned_cols=69 Identities=10% Similarity=-0.020 Sum_probs=55.4
Q ss_pred hhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 312 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+.+..+....+.+..+-.+|+|.+|+..|++||......-..+.. .....++|||.+|..+++|++|+
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp-------~~a~~~~nLa~~y~~~g~~~eA~ 371 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNL-------YVLRLLSIASEVLSYLQAYEEAS 371 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSH-------HHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHhcCHHHHH
Confidence 4456677777788888889999999999999999987653332221 24788999999999999999986
No 150
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.04 Score=41.25 Aligned_cols=61 Identities=13% Similarity=0.015 Sum_probs=47.8
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhhC
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIRL 388 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai~ 388 (388)
.-+...|.-+++.|+|.+|+..|++|+.+.+... + ......++.+++.|+..++++..|++
T Consensus 39 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~------~~~~~~~~~~~~~~~~~~~~~~~a~~ 99 (111)
T 2l6j_A 39 VGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAE---H------VAIRSKLQYRLELAQGAVGSVQIPVV 99 (111)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTT---S------HHHHHHHHHHHHHHHHHHHCCCCCSS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcc---H------HHHHHHHHHHHHHHHHHHHhHhhhHh
Confidence 3456789999999999999999999998654421 0 22346778999999999999988763
No 151
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.24 E-value=0.026 Score=48.93 Aligned_cols=54 Identities=20% Similarity=0.140 Sum_probs=45.4
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|..+++.|+|.+|+..|++|+..-+.. ...+.|+|.|+++++++++|+
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~ 59 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQD---------------PEALYWLARTQLKLGLVNPAL 59 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 345678999999999999999999999865442 467899999999999999886
No 152
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=95.18 E-value=0.027 Score=55.00 Aligned_cols=64 Identities=14% Similarity=0.013 Sum_probs=51.1
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|..+...|+|.+|+..|++||.+.+...+.+..+ ....++|||..|..+++|++|+
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-------~a~~l~nLa~~~~~qg~~~eA~ 402 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-------VASMWLKLGRLYMGLENKAAGE 402 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-------HHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-------HHHHHHHHHHHHHhccCHHHHH
Confidence 455666788899999999999999999999886532222222 3678899999999999999986
No 153
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.17 E-value=0.043 Score=41.88 Aligned_cols=53 Identities=11% Similarity=-0.043 Sum_probs=41.6
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+...|.-++..|+|.+|+..|.+++...+.. ..++.++|.|+.++++|++|+
T Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~ 100 (131)
T 2vyi_A 48 YFCNRAAAYSKLGNYAGAVQDCERAICIDPAY---------------SKAYGRMGLALSSLNKHVEAV 100 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhcCccC---------------HHHHHHHHHHHHHhCCHHHHH
Confidence 34567888889999999999999999864332 356788888888888888875
No 154
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.17 E-value=0.039 Score=44.48 Aligned_cols=53 Identities=11% Similarity=0.093 Sum_probs=41.4
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+...|.-+++.|+|.+|+..|.+|+...+.. ..++.|+|.|+.++++|++|+
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~ 101 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAAL 101 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHhccHHHHH
Confidence 34566788888999999999999999864432 356788888888888888875
No 155
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.13 E-value=0.04 Score=50.14 Aligned_cols=61 Identities=25% Similarity=0.286 Sum_probs=48.8
Q ss_pred HHhHHHHhhhHHhc-ccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKN-GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~-~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+.+. |+|.+|+..|++|+.+.+.... ......+++|++.+++++++|++|+
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~ 178 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS---------VALSNKCFIKCADLKALDGQYIEAS 178 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC---------hHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 45667788888886 9999999999999998754221 1223568999999999999999987
No 156
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.97 E-value=0.05 Score=46.98 Aligned_cols=62 Identities=6% Similarity=0.009 Sum_probs=47.1
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+++.|+|.+|+..|++|+...+.. ..+......+|.|++.|+.++++|++|+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~A~ 137 (228)
T 4i17_A 76 ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN--------ATIEKLYAIYYLKEGQKFQQAGNIEKAE 137 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--------HHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc--------HHHHHHHHHHHHHHhHHHHHhccHHHHH
Confidence 3445667888888888888888888888765432 1234445678999999999999999986
No 157
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=94.90 E-value=0.052 Score=51.08 Aligned_cols=63 Identities=14% Similarity=0.105 Sum_probs=46.2
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+..+...|.-++..|+|.+|+..|.+|+.+.+.... ......++.|++.||.++++|++|+
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~ 244 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAI 244 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 34556677889999999999999999999988754321 2234566777777777777777765
No 158
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=94.84 E-value=0.046 Score=47.48 Aligned_cols=54 Identities=2% Similarity=-0.079 Sum_probs=44.9
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...|..+++.|+|..|+..|+++++..+... .....+.+++.|+.+++++++|+
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~------------~~~~a~~~l~~~~~~~g~~~~A~ 204 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ------------ATRDALPLMENAYRQMQMNAQAE 204 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH------------HHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC------------ccHHHHHHHHHHHHHcCCcHHHH
Confidence 4678899999999999999999998765421 12356789999999999999986
No 159
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=94.84 E-value=0.044 Score=52.11 Aligned_cols=54 Identities=15% Similarity=0.096 Sum_probs=45.1
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|.-+++.++|++|+..|++|+.+-+.. ..++.|+|.||+++++|++|+
T Consensus 274 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~eA~ 327 (370)
T 1ihg_A 274 SCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN---------------TKALYRRAQGWQGLKEYDQAL 327 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHccCHHHHH
Confidence 334567888999999999999999999854321 567899999999999999986
No 160
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=94.84 E-value=0.039 Score=50.10 Aligned_cols=59 Identities=19% Similarity=0.219 Sum_probs=48.0
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGI 386 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~a 386 (388)
..+...|.-+++.|+|.+|+..|.+|+.+...... ......+|.|++.||.+++++++|
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS---------MALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB---------CSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHcCCcHHH
Confidence 45667899999999999999999999987643111 113467899999999999999998
No 161
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=94.78 E-value=0.049 Score=51.30 Aligned_cols=63 Identities=13% Similarity=-0.050 Sum_probs=48.1
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+..+...|.-++..|+|.+|+..|.+|+.+...... ......++.|+|.||.++++|++|+
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~ 242 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAV 242 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 45666678899999999999999999999998754211 2244667788888888888887775
No 162
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=94.74 E-value=0.033 Score=47.89 Aligned_cols=66 Identities=8% Similarity=0.016 Sum_probs=47.0
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHH-----HHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQ-----KLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~-----~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|..+++.|+|..|+..|++|+..-+... +-. .........++.|+|.||.++++|++|+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~ 74 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRT----EMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAY 74 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHH----HHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCh----HHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHH
Confidence 45667889999999999999999999998643210 000 0001123344566999999999999986
No 163
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=94.72 E-value=0.048 Score=46.33 Aligned_cols=69 Identities=16% Similarity=0.080 Sum_probs=47.7
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHH-HHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQ-KLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~-~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|.-+++.|+|.+|+..|++|+...+......-... .........++.|+|.|+.++++|++|+
T Consensus 72 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 141 (213)
T 1hh8_A 72 VAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE 141 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHH
Confidence 34567899999999999999999999997654220000000 0000012477899999999999999986
No 164
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=94.69 E-value=0.08 Score=44.25 Aligned_cols=62 Identities=10% Similarity=0.143 Sum_probs=51.5
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|.-++..|+|.+|+..|.+|+.+...... ......++.|++.++..+++|++|+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~ 86 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAAR 86 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4566778899999999999999999999998765321 2335678999999999999999886
No 165
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=94.68 E-value=0.062 Score=46.62 Aligned_cols=55 Identities=25% Similarity=0.321 Sum_probs=37.0
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+++.|+|.+|+..|++++...+.. ..++.|+|.|++++++|++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~ 193 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAI 193 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHhCCHHHHH
Confidence 3445677888899999999999999998865432 244555555555555555543
No 166
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=94.68 E-value=0.072 Score=40.17 Aligned_cols=53 Identities=26% Similarity=0.420 Sum_probs=43.4
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+...|.-+++.|+|.+|+..|.+++...+.. ...+.|+|.++.++++|++|+
T Consensus 45 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~ 97 (125)
T 1na0_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAI 97 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHH
Confidence 34567888899999999999999999864322 356789999999999999886
No 167
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=94.60 E-value=0.078 Score=48.54 Aligned_cols=62 Identities=13% Similarity=0.087 Sum_probs=42.8
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|+.+...|+|.+|+..|.+|+.+...... ......+|.|++.||.++++|++|+
T Consensus 35 A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~a~~~~~lg~~~~~~g~~~~A~ 96 (307)
T 2ifu_A 35 AASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRS---------LFHAAKAFEQAGMMLKDLQRMPEAV 96 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCGGGGH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 3344455577788888999999999998887643211 1123567778888888888887775
No 168
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=94.57 E-value=0.08 Score=47.57 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=25.3
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+..+...|..++..|+|.+|+..|++|+...
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~ 35 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVG 35 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhC
Confidence 4456677888999999999999999998863
No 169
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=94.53 E-value=0.059 Score=46.61 Aligned_cols=51 Identities=12% Similarity=0.048 Sum_probs=31.7
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+...|.-++..|+|++|+..|++|+..- . . ..++.|++.|+.++++|++|+
T Consensus 121 ~~~lg~~~~~~g~~~~A~~~~~~al~~~-~-~--------------~~~~~~la~~~~~~g~~~~A~ 171 (217)
T 2pl2_A 121 HLQRGLVYALLGERDKAEASLKQALALE-D-T--------------PEIRSALAELYLSMGRLDEAL 171 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-C-C--------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHhcc-c-c--------------hHHHHHHHHHHHHcCCHHHHH
Confidence 3456777778888888888888887754 1 1 234455555555555555543
No 170
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=94.52 E-value=0.039 Score=40.53 Aligned_cols=69 Identities=17% Similarity=0.109 Sum_probs=47.5
Q ss_pred cccCch-hHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCC-CCChHHHHHHHHHHHHhhhHHHH
Q 016518 307 WEMNNQ-GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SFVDDEQKLVKSLRVSCWLNSAA 375 (388)
Q Consensus 307 ~~l~~~-e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~-~~~~~~~~~~~~~~~~~~~NlA~ 375 (388)
..|++. ..+..|..+-.+|.++=+.|+|++|+.+|..|+.+|.... ...++..++.-..++.=|+++|.
T Consensus 7 ~~~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~RAE 77 (83)
T 2w2u_A 7 HHMSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRRIE 77 (83)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 356664 4568999999999999999999999999999999984310 01122233344455666666664
No 171
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=94.50 E-value=0.047 Score=52.67 Aligned_cols=64 Identities=16% Similarity=0.109 Sum_probs=47.8
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.-+...|.-++..|+|++|+..|++|+.++....... ...-....|.|+|.+|..+++|++|+
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~------~~~~~~~~~~nla~~y~~~g~~~~A~ 114 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQ------AEIRSLVTWGNYAWVYYHMGRLSDVQ 114 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGG------CTTTTHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccc------cchHHHHHHHHHHHHHHHcCChHHHH
Confidence 33455678999999999999999999999864311100 00112567999999999999999986
No 172
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.47 E-value=0.075 Score=50.08 Aligned_cols=34 Identities=15% Similarity=0.066 Sum_probs=29.9
Q ss_pred HHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 315 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
...+..+...|..++..|+|.+|+..|++|+...
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~ 78 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAG 78 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 4567777889999999999999999999999863
No 173
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=94.45 E-value=0.094 Score=49.30 Aligned_cols=64 Identities=16% Similarity=0.062 Sum_probs=49.7
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+..+...|.-++..|+|..|+..|.+|+.+.+..... ......+++|++.||..+++|++|+
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~ 204 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAI 204 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 456667777888888888888888888888877654211 2234689999999999999999986
No 174
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.40 E-value=0.057 Score=47.42 Aligned_cols=64 Identities=16% Similarity=-0.003 Sum_probs=50.4
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|+.++..|+|.+|+..|.+|+.........+ ......++.|+|.|+..+++|++|+
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~ 105 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAE 105 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHH
Confidence 455667889999999999999999999998763321111 1234678999999999999999986
No 175
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.40 E-value=0.043 Score=57.10 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=18.9
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
.+...|+-+++.|+|++|+..|++|+++-
T Consensus 45 a~~nLg~~l~~~g~~~eA~~~~~~Al~l~ 73 (723)
T 4gyw_A 45 AHSNLASVLQQQGKLQEALMHYKEAIRIS 73 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34456666777777777777777777643
No 176
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.38 E-value=0.056 Score=47.47 Aligned_cols=63 Identities=22% Similarity=0.151 Sum_probs=49.2
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-++..|+|.+|+..|++|+..+......+ ......++.|+|.|+.++++|++|+
T Consensus 127 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~ 189 (283)
T 3edt_B 127 AKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPD-------DPNVAKTKNNLASCYLKQGKYQDAE 189 (283)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 44556788899999999999999999999864321111 1224678999999999999999986
No 177
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.36 E-value=0.056 Score=53.56 Aligned_cols=64 Identities=8% Similarity=-0.115 Sum_probs=50.6
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|..+...|+|.+|+..|++||.+.....+.+.. .....++|||..|..+++|++|+
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp-------~~a~~l~nLa~~~~~~G~~~eA~ 413 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA-------QLGMAVMRAGLTNWHAGHIEVGH 413 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH-------HHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH-------HHHHHHHHHHHHHHHCCCHHHHH
Confidence 45566677888899999999999999999987642222211 23688899999999999999986
No 178
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.36 E-value=0.089 Score=51.22 Aligned_cols=69 Identities=12% Similarity=0.025 Sum_probs=51.7
Q ss_pred hhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 312 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+.+..+...-+.+...-+.|+|.+|+..|++||...+..-..+.. .....++|||.+|..+++|++|+
T Consensus 292 ~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp-------~~a~~~~nLa~~y~~~g~~~eA~ 360 (433)
T 3qww_A 292 RDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNV-------YMLHMMYQAMGVCLYMQDWEGAL 360 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSH-------HHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhch-------HHHHHHHHHHHHHHhhcCHHHHH
Confidence 3344555566666666667899999999999999987653322211 24688899999999999999986
No 179
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=94.34 E-value=0.033 Score=46.32 Aligned_cols=53 Identities=17% Similarity=0.201 Sum_probs=45.4
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+-..|..+++.|+|.+|+..|++++..-+.. ...+.|+|.+++++++|++|+
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~la~~~~~~g~~~~A~ 60 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSR---------------GDVKLAKADCLLETKQFELAQ 60 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTS---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHCCCHHHHH
Confidence 45567889999999999999999999865442 577899999999999999986
No 180
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.34 E-value=0.067 Score=48.49 Aligned_cols=63 Identities=19% Similarity=0.220 Sum_probs=50.2
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccC-chhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD-YQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~-~~~ai 387 (388)
..+.-+-..|+-+++.|+|.+|+..|.+|+.+....... .....+|.|++.||.++++ |++|+
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~~~~~g~~~~~A~ 257 (293)
T 3u3w_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM---------ALIGQLYYQRGECLRKLEYEEAEIE 257 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC---------TTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH---------HHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 445567788999999999999999999999977542211 1247899999999999995 58876
No 181
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=94.26 E-value=0.13 Score=40.33 Aligned_cols=72 Identities=18% Similarity=0.105 Sum_probs=51.9
Q ss_pred ccccCch-hHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCC-CC-ChHHHHHHHHHHHHhhhHHHHHH
Q 016518 306 PWEMNNQ-GKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SF-VDDEQKLVKSLRVSCWLNSAACC 377 (388)
Q Consensus 306 ~~~l~~~-e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~-~~-~~~~~~~~~~~~~~~~~NlA~c~ 377 (388)
..+|+.. +.+..|..+-.+|.++=+.++|++|+.+|..|+.+|.... .. .+......-.-++.-|+++|.-.
T Consensus 5 ~~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RAE~L 79 (117)
T 2cpt_A 5 SSGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKL 79 (117)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3567666 7889999999999999999999999999999999885411 11 22333444455666677776543
No 182
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=94.25 E-value=0.1 Score=49.00 Aligned_cols=64 Identities=11% Similarity=0.019 Sum_probs=44.7
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+..+...|.-++..|+|..|+..|.+|+.+.+..... ......+++|+|.||..+++|++|+
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~ 202 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKAL 202 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHH
Confidence 345555566667777777777777777777666542211 1235789999999999999999986
No 183
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=94.23 E-value=0.12 Score=44.70 Aligned_cols=32 Identities=34% Similarity=0.542 Sum_probs=25.9
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
.+..+...|+.+++.|+|.+|+..|.+++...
T Consensus 4 ~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~ 35 (258)
T 3uq3_A 4 MADKEKAEGNKFYKARQFDEAIEHYNKAWELH 35 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 56777888888888888888888888888754
No 184
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=94.19 E-value=0.09 Score=46.18 Aligned_cols=31 Identities=23% Similarity=0.094 Sum_probs=21.7
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+..+...|..++..|+|.+|+..|++|+...
T Consensus 43 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 73 (275)
T 1xnf_A 43 AQLLYERGVLYDSLGLRALARNDFSQALAIR 73 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHcC
Confidence 4445566777777777777777777777754
No 185
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=94.14 E-value=0.082 Score=46.53 Aligned_cols=52 Identities=15% Similarity=0.163 Sum_probs=40.1
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+...|.-+++.|+|.+|+..|.+|+...+.. ..++.|+|.||.++++|++|+
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~ 128 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTR---------------LDMYGQIGSYFYNKGNFPLAI 128 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------THHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHccCHHHHH
Confidence 4567777888888888888888888754432 357788999999999988886
No 186
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.02 E-value=0.067 Score=52.04 Aligned_cols=64 Identities=8% Similarity=-0.195 Sum_probs=50.6
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|..+...|+|.+|+..|+++|...+...+.... .....++|||..|..+++|++|+
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp-------~~a~~l~nLa~~~~~~g~~~eA~ 391 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP-------VRGVQVMKVGKLQLHQGMFPQAM 391 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH-------HHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh-------HHHHHHHHHHHHHHhcCCHHHHH
Confidence 45566677888899999999999999999987642222211 24688899999999999999986
No 187
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=94.01 E-value=0.09 Score=46.20 Aligned_cols=54 Identities=11% Similarity=0.008 Sum_probs=45.4
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|.-+++.|+|.+|+..|.+|+...+.. ..++.|+|.|+.++++|++|+
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~g~~~~A~ 131 (275)
T 1xnf_A 78 EVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY---------------NYAHLNRGIALYYGGRDKLAQ 131 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------THHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCccc---------------cHHHHHHHHHHHHhccHHHHH
Confidence 345667889999999999999999999865432 367889999999999999886
No 188
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=93.98 E-value=0.12 Score=43.10 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=49.2
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|.-++..|+|.+|+..|.+|+.+...... ......++.|++.|+.++++|++|+
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~ 167 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD---------QVAIACAFRGLGDLAQQEKNLLEAQ 167 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc---------hHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 3445667788999999999999999999987654221 2334677899999999999999886
No 189
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=93.93 E-value=0.15 Score=46.49 Aligned_cols=59 Identities=17% Similarity=0.177 Sum_probs=38.2
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.......|+.+++.|+|.+|+..|++++...+.. ......++.++|.|+.++++|++|+
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~la~~~~~~~~~~~A~ 292 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKTEPSV-----------AEYTVRSKERICHCFSKDEKPVEAI 292 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----------hHHHHHHHHHHHHHHHHccCHHHHH
Confidence 3344556888899999999999999998865432 1223344555666666666665554
No 190
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.92 E-value=0.081 Score=47.92 Aligned_cols=32 Identities=38% Similarity=0.461 Sum_probs=27.1
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
+..++..|+.+|+.|+|.+|+..|++|+...+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 35 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNP 35 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 45678889999999999999999999998654
No 191
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=93.81 E-value=0.096 Score=38.57 Aligned_cols=67 Identities=16% Similarity=0.091 Sum_probs=47.1
Q ss_pred cCchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCC-CCCChHHHHHHHHHHHHhhhHHHH
Q 016518 309 MNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED-GSFVDDEQKLVKSLRVSCWLNSAA 375 (388)
Q Consensus 309 l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~-~~~~~~~~~~~~~~~~~~~~NlA~ 375 (388)
|+..+.+..|..+-.+|.+.=+.|+|++|+.+|..|+.+|-.. ...+++..+..-.-++.=|+++|-
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~RAE 71 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAE 71 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 5556678888899999999999999999999999999987431 111223333444445555666654
No 192
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=93.76 E-value=0.12 Score=48.13 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=24.7
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+..+...|..+++.|+|.+|+..|++|+...
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~ 39 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVG 39 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcC
Confidence 4455667888889999999999999988863
No 193
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.74 E-value=0.082 Score=52.06 Aligned_cols=55 Identities=25% Similarity=0.263 Sum_probs=27.9
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGI 386 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~a 386 (388)
.+..+...|+.+++.|+|++|+..|++|+..-+.. ..++.|+|.||+++++|++|
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A 59 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYA 59 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHH
Confidence 34444455555555555555555555555542221 34455555555555555554
No 194
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=93.73 E-value=0.11 Score=49.63 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=26.2
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
.+..+...|+.+++.|+|.+|+..|++++...
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~ 56 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVDGD 56 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 45667778888999999999999999988754
No 195
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.69 E-value=0.14 Score=42.08 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=24.0
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
..+...|.-++..|+|..|+..|.+|+...+
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 75 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLRG 75 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 3456678888888888888888888887654
No 196
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=93.60 E-value=0.14 Score=43.12 Aligned_cols=20 Identities=5% Similarity=-0.378 Sum_probs=13.3
Q ss_pred HhhhHHHHHHHHc-cCchhhh
Q 016518 368 SCWLNSAACCLKL-KDYQGIR 387 (388)
Q Consensus 368 ~~~~NlA~c~lKl-~~~~~ai 387 (388)
.++.++|.|+.++ ++|++|+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~ 97 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESM 97 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHH
Confidence 4556677777777 7776664
No 197
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.58 E-value=0.12 Score=46.86 Aligned_cols=55 Identities=13% Similarity=0.048 Sum_probs=47.2
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...+...|..++..|++..|+..|++|+..-+.. ...+.|+|.++++++++++|+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~la~~~~~~g~~~~A~ 171 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN---------------GEIGLLLAETLIALNRSEDAE 171 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc---------------hhHHHHHHHHHHHCCCHHHHH
Confidence 3456788999999999999999999999865543 467899999999999999986
No 198
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=93.51 E-value=0.11 Score=39.45 Aligned_cols=51 Identities=27% Similarity=0.449 Sum_probs=34.0
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...|.-++..|++.+|+..|.+++...+.. ..++.++|.|+.++++|++|+
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~ 89 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAI 89 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------hHHHHHHHHHHHHhcCHHHHH
Confidence 344555666666777777666666543221 346778899999999888875
No 199
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=93.47 E-value=0.079 Score=49.13 Aligned_cols=21 Identities=10% Similarity=0.018 Sum_probs=15.0
Q ss_pred HHhhhHHHHHHHHccCchhhh
Q 016518 367 VSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 367 ~~~~~NlA~c~lKl~~~~~ai 387 (388)
..++.|++.||.++++|++|+
T Consensus 133 ~~~~~~l~~~~~~~g~~~~A~ 153 (365)
T 4eqf_A 133 LKALMALAVSYTNTSHQQDAC 153 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHccccHHHHH
Confidence 356677777777777777765
No 200
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.44 E-value=0.18 Score=49.04 Aligned_cols=66 Identities=11% Similarity=0.019 Sum_probs=50.6
Q ss_pred HHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 315 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...+..+...-.++.++|+|.+|+..|++++......-..+. -.....++|+|..|..+++|++|+
T Consensus 284 ~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h-------~~~~~~~~~L~~~y~~~g~~~eA~ 349 (429)
T 3qwp_A 284 WKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDIN-------IYQLKVLDCAMDACINLGLLEEAL 349 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTS-------HHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccc-------hHHHHHHHHHHHHHHhhccHHHHH
Confidence 344556666667788999999999999999987654322221 135788999999999999999986
No 201
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=93.36 E-value=0.095 Score=46.83 Aligned_cols=65 Identities=11% Similarity=-0.014 Sum_probs=51.7
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+..+...|..++..|+|.+|+..|++|+.+........ ......++.++|.|+..+++|++|+
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~ 89 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHD-------HPDVATMLNILALVYRDQNKYKDAA 89 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSS-------SHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4566777899999999999999999999999764321101 1234688999999999999999986
No 202
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=93.29 E-value=0.14 Score=45.61 Aligned_cols=63 Identities=21% Similarity=0.179 Sum_probs=49.0
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+++.|+|.+|+..|.+|+.........+ ......++.++|.|++++++|++|+
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~ 215 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD-------DPNVAKTKNNLASCYLKQGKFKQAE 215 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT-------CHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 44456678899999999999999999999865432111 1223678899999999999999986
No 203
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=93.22 E-value=0.19 Score=37.71 Aligned_cols=67 Identities=15% Similarity=0.150 Sum_probs=48.3
Q ss_pred chhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCC-CCCChHHHHHHHHHHHHhhhHHHHHH
Q 016518 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED-GSFVDDEQKLVKSLRVSCWLNSAACC 377 (388)
Q Consensus 311 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~-~~~~~~~~~~~~~~~~~~~~NlA~c~ 377 (388)
-...+..|..+-..|.++=+.|+|++|+.+|..|+.+|... ....+...+..-.-++.=|+++|.-.
T Consensus 8 ~~~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~L 75 (93)
T 1wfd_A 8 QDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENI 75 (93)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888899999999999999999999999998541 11223344445555666677776543
No 204
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=93.13 E-value=0.14 Score=47.34 Aligned_cols=21 Identities=19% Similarity=0.419 Sum_probs=16.2
Q ss_pred HHhhhHHHHHHHHccCchhhh
Q 016518 367 VSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 367 ~~~~~NlA~c~lKl~~~~~ai 387 (388)
..++.|++.||.++++|.+|+
T Consensus 281 ~~~~~~l~~~~~~~g~~~~A~ 301 (365)
T 4eqf_A 281 IRSRYNLGISCINLGAYREAV 301 (365)
T ss_dssp HHHHHHHHHHHHHHTCCHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHH
Confidence 456778888888888888775
No 205
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=93.12 E-value=0.17 Score=38.36 Aligned_cols=52 Identities=27% Similarity=0.418 Sum_probs=42.0
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
....|.-+++.|+|.+|+..|.+++...+.. ..++.++|.++.+++++++|+
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~ 123 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAI 123 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHHccHHHHH
Confidence 4456777889999999999999999864332 356788999999999999886
No 206
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=93.11 E-value=0.18 Score=40.81 Aligned_cols=51 Identities=12% Similarity=0.026 Sum_probs=33.9
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...|.-+++.|+|.+|+..|.+++...+.. ..++.++|.|+.+++++++|+
T Consensus 114 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~ 164 (186)
T 3as5_A 114 FRLGVALDNLGRFDEAIDSFKIALGLRPNE---------------GKVHRAIAFSYEQMGRHEEAL 164 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHhcCccc---------------hHHHHHHHHHHHHcCCHHHHH
Confidence 344555666666666666666666543221 356788888888888888875
No 207
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=93.11 E-value=0.18 Score=47.96 Aligned_cols=57 Identities=18% Similarity=0.199 Sum_probs=36.4
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGI 386 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~a 386 (388)
......|+.+++.|+|.+|+..|++++...+.. ......++.|++.|+.+++++++|
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~-----------~~~~~~~~~~l~~~~~~~g~~~~A 314 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSI-----------AEYTVRSKERICHCFSKDEKPVEA 314 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSS-----------HHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcc-----------hHHHHHHHHHHHHHHHHCCCHHHH
Confidence 334555999999999999999999999864431 112233444555555555555444
No 208
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=92.93 E-value=0.2 Score=36.97 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=41.3
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCC-CCCChHHHHHHHHHHHHhhhHHHH
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED-GSFVDDEQKLVKSLRVSCWLNSAA 375 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~-~~~~~~~~~~~~~~~~~~~~NlA~ 375 (388)
..|..+-.++-++=+.|+|++|+.+|..|+.+|-.. ....+...++.-.-++.-|+++|-
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~RAE 74 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAE 74 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHH
Confidence 356666677888889999999999999999988531 112233334444456777777764
No 209
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=92.83 E-value=0.03 Score=43.15 Aligned_cols=46 Identities=20% Similarity=0.185 Sum_probs=32.8
Q ss_pred hcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 330 KNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 330 k~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..|+|.+|+..|++|+..-. ++ .....++.|++.|+.++++|++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~-----~~-------p~~~~~~~~lg~~~~~~~~~~~A~ 47 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGL-----QG-------KDLAECYLGLGSTFRTLGEYRKAE 47 (117)
T ss_dssp -----CCCHHHHHHHHSSCC-----CH-------HHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCC-----CC-------ccHHHHHHHHHHHHHHcCCHHHHH
Confidence 35889999999999998421 01 123678899999999999999986
No 210
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=92.82 E-value=0.2 Score=40.58 Aligned_cols=20 Identities=5% Similarity=0.011 Sum_probs=13.1
Q ss_pred HhhhHHHHHHHHccCchhhh
Q 016518 368 SCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 368 ~~~~NlA~c~lKl~~~~~ai 387 (388)
.++.++|.++.++++|++|+
T Consensus 111 ~~~~~~a~~~~~~~~~~~A~ 130 (186)
T 3as5_A 111 NVRFRLGVALDNLGRFDEAI 130 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHH
Confidence 45566777777777776664
No 211
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=92.80 E-value=0.16 Score=48.55 Aligned_cols=21 Identities=14% Similarity=0.109 Sum_probs=15.3
Q ss_pred HHhhhHHHHHHHHccCchhhh
Q 016518 367 VSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 367 ~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+|.|++.|+.++++|.+|+
T Consensus 166 ~~a~~~~g~~~~~~g~~~eAl 186 (382)
T 2h6f_A 166 YQVWHHRRVLVEWLRDPSQEL 186 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHH
T ss_pred HHHHHHHHHHHHHccCHHHHH
Confidence 356777777777777777775
No 212
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=92.77 E-value=0.11 Score=50.94 Aligned_cols=55 Identities=22% Similarity=0.164 Sum_probs=47.1
Q ss_pred HHhHHHHhhhHHhcccH-HHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKY-ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~-~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|..++..|+| .+|+..|++|+..-+.. ..++.|+|.||+++++|++|+
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~ 157 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL---------------VEAWNQLGEVYWKKGDVTSAH 157 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 45567889999999999 99999999999864432 467899999999999999986
No 213
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=92.66 E-value=0.18 Score=48.09 Aligned_cols=66 Identities=9% Similarity=-0.001 Sum_probs=37.5
Q ss_pred HHHHhhhHHhccc-HHHHHHHHHHHHhhhcCCC--------------CCChHHHHHHH------HHHHHhhhHHHHHHHH
Q 016518 321 KKEEGNLLFKNGK-YERAGKKYNKAADCVSEDG--------------SFVDDEQKLVK------SLRVSCWLNSAACCLK 379 (388)
Q Consensus 321 ~k~~Gn~~fk~~~-~~~A~~~Y~kal~~l~~~~--------------~~~~~~~~~~~------~~~~~~~~NlA~c~lK 379 (388)
+...|+-+++.|+ |.+|+..|.+|+.+-+... ...+ ....++ .-...+|.|++.|+.+
T Consensus 134 ~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~e-Al~~~~kal~ldP~~~~a~~~lg~~~~~ 212 (382)
T 2h6f_A 134 WHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQ-ELEFIADILNQDAKNYHAWQHRQWVIQE 212 (382)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTT-HHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHH-HHHHHHHHHHhCccCHHHHHHHHHHHHH
Confidence 3455666666675 7777777777776432210 0111 111111 1124567888888888
Q ss_pred ccCchhhh
Q 016518 380 LKDYQGIR 387 (388)
Q Consensus 380 l~~~~~ai 387 (388)
+++|++|+
T Consensus 213 ~g~~~eAl 220 (382)
T 2h6f_A 213 FKLWDNEL 220 (382)
T ss_dssp HTCCTTHH
T ss_pred cCChHHHH
Confidence 88888876
No 214
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=92.57 E-value=0.17 Score=47.32 Aligned_cols=30 Identities=20% Similarity=0.240 Sum_probs=24.9
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
..+...|+.+++.|+|.+|+..|++|+..-
T Consensus 68 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 97 (388)
T 1w3b_A 68 EAYSNLGNVYKERGQLQEAIEHYRHALRLK 97 (388)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHcC
Confidence 346677888999999999999999999854
No 215
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.56 E-value=0.12 Score=47.57 Aligned_cols=20 Identities=5% Similarity=-0.129 Sum_probs=12.7
Q ss_pred HhhhHHHHHHHHccCchhhh
Q 016518 368 SCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 368 ~~~~NlA~c~lKl~~~~~ai 387 (388)
.++.+++.|+.+++++++|+
T Consensus 133 ~~~~~l~~~~~~~g~~~~A~ 152 (368)
T 1fch_A 133 TALMALAVSFTNESLQRQAC 152 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH
Confidence 45566666666666666664
No 216
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.47 E-value=0.23 Score=43.59 Aligned_cols=53 Identities=9% Similarity=-0.009 Sum_probs=31.9
Q ss_pred HHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 323 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..|.-++..|+|.+|+..|.+++. ..... .....++.+++.|+.++++|++|+
T Consensus 42 ~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~-----------~~~~~~~~~lg~~~~~~~~~~~A~ 94 (272)
T 3u4t_A 42 RRAVCYYELAKYDLAQKDIETYFS-KVNAT-----------KAKSADFEYYGKILMKKGQDSLAI 94 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHT-TSCTT-----------TCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHh-ccCch-----------hHHHHHHHHHHHHHHHcccHHHHH
Confidence 345555555666666666666555 22111 112445788888888888888876
No 217
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=92.47 E-value=0.14 Score=44.50 Aligned_cols=30 Identities=20% Similarity=0.141 Sum_probs=19.8
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~ 347 (388)
+..+...|..++..|+|.+|+..|.+++..
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 66 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEI 66 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 455556666667777777777777776664
No 218
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=92.46 E-value=0.26 Score=43.40 Aligned_cols=68 Identities=10% Similarity=0.058 Sum_probs=48.7
Q ss_pred hHHHHhhhHHh--------cccHHHHHHHHHHHHhhhcCCCCCCh--HHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFK--------NGKYERAGKKYNKAADCVSEDGSFVD--DEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk--------~~~~~~A~~~Y~kal~~l~~~~~~~~--~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+-..|.-+++ .|+|.+|+..|++++...+....... .....+.......+.++|.||.++++|++|+
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 168 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAA 168 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 35567888899 99999999999999987654321111 1112233334445689999999999999987
No 219
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.46 E-value=0.16 Score=45.69 Aligned_cols=53 Identities=13% Similarity=0.077 Sum_probs=45.1
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+...|.-+++.|+|.+|+..|++++...+.. ..++.|+|.|+.+++++.+|+
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~ 290 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYHRQALVLIPQN---------------ASTYSAIGYIHSLMGNFENAV 290 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------SHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhCccc---------------hHHHHHHHHHHHHhccHHHHH
Confidence 44567888999999999999999999865432 467899999999999999986
No 220
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.43 E-value=0.095 Score=43.50 Aligned_cols=55 Identities=11% Similarity=0.105 Sum_probs=41.7
Q ss_pred HHhHHHHhhhHHhcccH----------HHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHcc------
Q 016518 318 AGRKKEEGNLLFKNGKY----------ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK------ 381 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~----------~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~------ 381 (388)
+..+...|+.+...++| ++|+..|++||++-+.. ...|.|++.+|.+++
T Consensus 36 aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~---------------~~A~~~LG~ay~~lg~l~P~~ 100 (158)
T 1zu2_A 36 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK---------------DEAVWCIGNAYTSFAFLTPDE 100 (158)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc---------------HHHHHHHHHHHHHhcccCcch
Confidence 44455677777777665 59999999999865442 577899999999985
Q ss_pred -----Cchhhh
Q 016518 382 -----DYQGIR 387 (388)
Q Consensus 382 -----~~~~ai 387 (388)
+|++|+
T Consensus 101 ~~a~g~~~eA~ 111 (158)
T 1zu2_A 101 TEAKHNFDLAT 111 (158)
T ss_dssp HHHHHHHHHHH
T ss_pred hhhhccHHHHH
Confidence 787776
No 221
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=92.42 E-value=0.23 Score=42.49 Aligned_cols=20 Identities=10% Similarity=0.002 Sum_probs=13.9
Q ss_pred HhhhHHHHHHHHccCchhhh
Q 016518 368 SCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 368 ~~~~NlA~c~lKl~~~~~ai 387 (388)
.++.++|.|++++++|++|+
T Consensus 126 ~~~~~~a~~~~~~~~~~~A~ 145 (243)
T 2q7f_A 126 DLFYMLGTVLVKLEQPKLAL 145 (243)
T ss_dssp HHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHH
Confidence 35667777777777777765
No 222
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=92.35 E-value=0.24 Score=42.95 Aligned_cols=20 Identities=15% Similarity=0.190 Sum_probs=12.6
Q ss_pred HhhhHHHHHHHHccCchhhh
Q 016518 368 SCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 368 ~~~~NlA~c~lKl~~~~~ai 387 (388)
..+.++|.++++++++++|+
T Consensus 142 ~~~~~la~~~~~~g~~~~A~ 161 (252)
T 2ho1_A 142 RVFENLGLVSLQMKKPAQAK 161 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH
Confidence 45566666666666666654
No 223
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=92.33 E-value=0.25 Score=41.55 Aligned_cols=51 Identities=10% Similarity=0.042 Sum_probs=32.1
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...|.-+++.|++.+|+..|.+++...+.. ..++.++|.|++++++|++|+
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~ 167 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAAQPQF---------------PPAFKELARTKMLAGQLGDAD 167 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------chHHHHHHHHHHHcCCHHHHH
Confidence 344555666666666666666666543221 345677888888888887775
No 224
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.28 E-value=0.22 Score=45.84 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=22.5
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
..+...|.-+++.|+|.+|+..|++++...
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 247 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVR 247 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 334556777888888888888888888754
No 225
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=92.26 E-value=0.23 Score=40.79 Aligned_cols=53 Identities=9% Similarity=0.095 Sum_probs=43.5
Q ss_pred hHHHHhhh-HHhcccH--HHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNL-LFKNGKY--ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~-~fk~~~~--~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
-+...|.- +++.|+| .+|+..|.+++...+.. ..++.|+|.|++++++|++|+
T Consensus 80 ~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~ 135 (177)
T 2e2e_A 80 LYAALATVLYYQASQHMTAQTRAMIDKALALDSNE---------------ITALMLLASDAFMQANYAQAI 135 (177)
T ss_dssp HHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcccHHHHH
Confidence 34556777 6789999 99999999999865432 367889999999999999986
No 226
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=92.20 E-value=0.26 Score=42.14 Aligned_cols=21 Identities=5% Similarity=-0.020 Sum_probs=17.6
Q ss_pred HHhhhHHHHHHHHccCchhhh
Q 016518 367 VSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 367 ~~~~~NlA~c~lKl~~~~~ai 387 (388)
..++.++|.+++++++|++|+
T Consensus 159 ~~~~~~l~~~~~~~~~~~~A~ 179 (243)
T 2q7f_A 159 TEARFQFGMCLANEGMLDEAL 179 (243)
T ss_dssp HHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHH
Confidence 456788999999999998886
No 227
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=92.20 E-value=0.18 Score=50.38 Aligned_cols=28 Identities=4% Similarity=-0.133 Sum_probs=17.4
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADC 347 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~ 347 (388)
.+...|..+++.|+|++|+..|++|+..
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~ 52 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLAL 52 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3445566666666666666666666654
No 228
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=92.14 E-value=0.3 Score=44.34 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=24.2
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
+......|..++..|+|..|+..|.+++...+
T Consensus 120 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 151 (359)
T 3ieg_A 120 MQRLRSQALDAFDGADYTAAITFLDKILEVCV 151 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 33445567888888999999999988887644
No 229
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=92.01 E-value=0.19 Score=51.74 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=15.4
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~ 347 (388)
..+...|..+++.|+|++|+..|++|+..
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~ 462 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAER 462 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Confidence 34444555555555555555555555553
No 230
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=91.94 E-value=0.32 Score=45.18 Aligned_cols=63 Identities=13% Similarity=0.023 Sum_probs=50.9
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+..+...|..++..|+|..|+..|.+|+.+...... ......++.|+|.|+..+++|++|+
T Consensus 45 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~ 107 (406)
T 3sf4_A 45 TLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD---------QLGEAKASGNLGNTLKVLGNFDEAI 107 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccc---------cHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 34566778899999999999999999999987654321 2334678899999999999999886
No 231
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=91.89 E-value=0.38 Score=34.12 Aligned_cols=47 Identities=23% Similarity=0.243 Sum_probs=37.4
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHcc
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLK 381 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~ 381 (388)
.+...|.-+++.|+|.+|+..|++|+..-+.. ...+.|++.++.+++
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~---------------~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHhcC
Confidence 34567889999999999999999999864332 356788999988764
No 232
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=91.79 E-value=0.28 Score=45.99 Aligned_cols=62 Identities=11% Similarity=0.044 Sum_probs=50.4
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+.-+...|.-++..|+|.+|+..|++|+.+...... ......++.+++.||..+++|++|+
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~ 146 (411)
T 4a1s_A 85 LSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMND---------RLGEAKSSGNLGNTLKVMGRFDEAA 146 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccC---------chHHHHHHHHHHHHHHHCCCHHHHH
Confidence 4456678899999999999999999999997654321 2345678999999999999999886
No 233
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.69 E-value=0.11 Score=49.35 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=45.3
Q ss_pred HHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCCh--HHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVD--DEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 323 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~--~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
++|..+++.|+|++|+..|.++++..+....... ............++.|++..|.++++|++|+
T Consensus 9 ~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~ 75 (434)
T 4b4t_Q 9 EEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLR 75 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHH
Confidence 4677788999999999999999987654221110 0001112233456789999999999999986
No 234
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=91.67 E-value=0.3 Score=43.63 Aligned_cols=63 Identities=13% Similarity=0.023 Sum_probs=50.2
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+.-+...|.-++..|+|..|+..|.+|+.+...... ......++.++|.++..+++|++|+
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~ 103 (338)
T 3ro2_A 41 TLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD---------QLGEAKASGNLGNTLKVLGNFDEAI 103 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccc---------cHHHHHHHHHHHHHHHHccCHHHHH
Confidence 34566778899999999999999999999987643210 2334678899999999999999886
No 235
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=91.65 E-value=0.17 Score=45.49 Aligned_cols=20 Identities=5% Similarity=-0.105 Sum_probs=14.5
Q ss_pred HhhhHHHHHHHHccCchhhh
Q 016518 368 SCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 368 ~~~~NlA~c~lKl~~~~~ai 387 (388)
.++.++|.|+.++++|++|+
T Consensus 90 ~~~~~la~~~~~~~~~~~A~ 109 (327)
T 3cv0_A 90 AVHAALAVSHTNEHNANAAL 109 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH
Confidence 45677777777777777765
No 236
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=91.64 E-value=0.25 Score=49.29 Aligned_cols=53 Identities=11% Similarity=0.040 Sum_probs=33.5
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+...|.-+++.|+|++|+..|++|+..-+.. ..++.|+|.||.++++|++|+
T Consensus 59 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~ 111 (568)
T 2vsy_A 59 AVARLGRVRWTQQRHAEAAVLLQQASDAAPEH---------------PGIALWLGHALEDAGQAEAAA 111 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 34556777788888888888888888754321 234555555555555555553
No 237
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=91.45 E-value=0.29 Score=44.46 Aligned_cols=42 Identities=19% Similarity=0.209 Sum_probs=26.6
Q ss_pred cccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 331 NGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 331 ~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.|+|++|+..|++++...+.. ..+++|+|.|++++++|++|+
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~---------------~~~~~~la~~~~~~g~~~eA~ 220 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPT---------------LLLLNGQAACHMAQGRWEAAE 220 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 355666666666665543221 356778888888888887775
No 238
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=91.44 E-value=0.32 Score=43.59 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=16.2
Q ss_pred HHhhhHHHHHHHHccCchhhh
Q 016518 367 VSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 367 ~~~~~NlA~c~lKl~~~~~ai 387 (388)
..++.|+|.|++++++|++|+
T Consensus 240 ~~~~~~l~~~~~~~g~~~~A~ 260 (327)
T 3cv0_A 240 VRVMYNMAVSYSNMSQYDLAA 260 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHH
Confidence 356778888888888888775
No 239
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=91.37 E-value=0.34 Score=43.55 Aligned_cols=63 Identities=25% Similarity=0.255 Sum_probs=44.7
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|.-+++.|+|.+|+..|++++...+........ .....++.|+|.|+.++++|++|+
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~------~~~~~~~~~la~~~~~~g~~~~A~ 256 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTV------DKWEPLLNNLGHVCRKLKKYAEAL 256 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTT------TTCCHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccc------cHHHHHHHHHHHHHHHhcCHHHHH
Confidence 334567788888888888888888888876432111000 011468899999999999999986
No 240
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=91.11 E-value=0.23 Score=48.56 Aligned_cols=55 Identities=18% Similarity=0.033 Sum_probs=42.6
Q ss_pred HHHHhhhHHhc--------ccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKN--------GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~--------~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+...|+-++.. |+|++|+..|++|+.+-+.. ......+.|+|.||.++++|++|+
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~------------~~~~~~~~~lg~~~~~~g~~~~A~ 278 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKA------------SSNPDLHLNRATLHKYEESYGEAL 278 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGG------------GGCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCc------------ccCHHHHHHHHHHHHHcCCHHHHH
Confidence 45567777777 99999999999999874410 011577889999999999998886
No 241
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=91.09 E-value=0.23 Score=51.17 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=43.9
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+...|+.+++.|+|++|+..|++|+++-+.. ...++|+|.|+.++++|++ +
T Consensus 469 a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~---------------~~~~~~lg~~~~~~g~~~~-~ 520 (681)
T 2pzi_A 469 LVWYRAVAELLTGDYDSATKHFTEVLDTFPGE---------------LAPKLALAATAELAGNTDE-H 520 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---------------SHHHHHHHHHHHHHTCCCT-T
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCChHH-H
Confidence 34567888999999999999999999876543 4778899999999999987 5
No 242
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=90.01 E-value=0.35 Score=50.26 Aligned_cols=53 Identities=25% Similarity=0.419 Sum_probs=47.5
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
-+-.++..+-++|+|+.|+..=++|+.+.+.. -.++.+||.||+++++|+.|+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse---------------F~tW~~La~vYi~l~d~e~AL 391 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDS---------------FESWYNLARCHIKKEEYEKAL 391 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchh---------------hHHHHHHHHHHHHhccHHHHH
Confidence 46667888899999999999999999988775 488999999999999999986
No 243
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=89.70 E-value=0.45 Score=44.37 Aligned_cols=21 Identities=14% Similarity=-0.012 Sum_probs=16.8
Q ss_pred HHhhhHHHHHHHHccCchhhh
Q 016518 367 VSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 367 ~~~~~NlA~c~lKl~~~~~ai 387 (388)
...+.|++.++.+++++++|+
T Consensus 339 ~~~~~~l~~~~~~~g~~~~A~ 359 (388)
T 1w3b_A 339 AAAHSNLASVLQQQGKLQEAL 359 (388)
T ss_dssp HHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHH
Confidence 356788888888888888875
No 244
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=89.23 E-value=0.53 Score=45.33 Aligned_cols=54 Identities=11% Similarity=0.023 Sum_probs=46.0
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|.-+++.|+|.+|+..|++++..-+.. ..++.++|.|+.++++|++|+
T Consensus 40 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~ 93 (514)
T 2gw1_A 40 VFYSNLSACYVSVGDLKKVVEMSTKALELKPDY---------------SKVLLRRASANEGLGKFADAM 93 (514)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHhccChHH---------------HHHHHHHHHHHHHHhhHHHHH
Confidence 346677899999999999999999999864432 467899999999999999986
No 245
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=89.05 E-value=0.58 Score=34.53 Aligned_cols=37 Identities=30% Similarity=0.369 Sum_probs=32.7
Q ss_pred HHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 314 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
-+..|...-.+++.+.+.|+|.+||.++.+|..||..
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3556788888899999999999999999999999964
No 246
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=88.87 E-value=0.1 Score=50.88 Aligned_cols=45 Identities=22% Similarity=0.327 Sum_probs=23.6
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.....|+.+|..|+|+.|...|.++ .-|.++|.|+.++++|++|+
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----------------------~n~~~LA~~L~~Lg~yq~AV 168 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAV 168 (449)
T ss_dssp -------------CTTTHHHHHHHT-----------------------TCHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----------------------hhHHHHHHHHHHhccHHHHH
Confidence 6677899999999999999999976 23466667777777666665
No 247
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=88.64 E-value=0.69 Score=38.00 Aligned_cols=56 Identities=13% Similarity=-0.137 Sum_probs=44.1
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+-..|.-+++.|+|++|+..|.++++.-+... + ...+.|++.++..++++++|+
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~---~----------~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGAQ---D----------GEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT---T----------THHHHHHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccC---h----------HHHHHHHHHHHHHhCCCCcHH
Confidence 4456678899999999999999999998543211 0 246789999999999998875
No 248
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=88.53 E-value=0.58 Score=45.46 Aligned_cols=54 Identities=13% Similarity=0.086 Sum_probs=46.0
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+...|.-+++.|+|.+|+..|++++..-+.. ...+.++|.|+.++++|++|+
T Consensus 60 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~ 113 (537)
T 3fp2_A 60 VFYSNISACYISTGDLEKVIEFTTKALEIKPDH---------------SKALLRRASANESLGNFTDAM 113 (537)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCch---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 456678999999999999999999999864332 467899999999999999986
No 249
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.24 E-value=1.2 Score=42.04 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=49.3
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.-....|+-++..|+|.+|+..|++++..+..... +...+.+++|++.+|+.+++|.+|+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~A~ 195 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDD---------KPSLVDVHLLESKVYHKLRNLAKSK 195 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC---------STHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc---------chhHHHHHHHHHHHHHHhCcHHHHH
Confidence 445567799999999999999999999988755321 1235688999999999999999885
No 250
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=86.58 E-value=1.3 Score=40.09 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=42.3
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGI 386 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~a 386 (388)
+-..|.-+.+.|+|.+|...|++|+..-+.. ...+.|++.++..++++.++
T Consensus 203 ~~~la~~~~~~g~~~eA~~~l~~al~~~p~~---------------~~~l~~l~~~~~~~g~~~ea 253 (291)
T 3mkr_A 203 LNGQAACHMAQGRWEAAEGVLQEALDKDSGH---------------PETLINLVVLSQHLGKPPEV 253 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCCHHH
Confidence 4567888999999999999999999865432 35689999999999998764
No 251
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=86.26 E-value=1.1 Score=44.31 Aligned_cols=55 Identities=18% Similarity=-0.005 Sum_probs=46.0
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+..+...|.-+++.|++++|+..|++++..-+.. ...|.+++.||.++++|++|+
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~ 570 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLSTND---------------ANVHTAIALVYLHKKIPGLAI 570 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhCCHHHHH
Confidence 3445667888999999999999999999864332 478899999999999999986
No 252
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=84.85 E-value=1.6 Score=40.27 Aligned_cols=62 Identities=8% Similarity=0.008 Sum_probs=46.6
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..+...|..++..|+|..|...|.+|+...+.... ......+++|++.+++.+++|.+|+
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~G~~~~A~ 113 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV---------WHYALWSLIQQSEILFAQGFLQTAW 113 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc---------HHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 3445566788888889999999999999987654221 1234567899999999999999886
No 253
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=84.58 E-value=3.2 Score=38.25 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=48.2
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHc
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL 380 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl 380 (388)
.-..|-++|+.|+|++|+..++..|..+......+++|.++++++...|..=+-++.+.+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl 164 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMET 164 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346699999999999999999999999887666677888888888777766555555554
No 254
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.58 E-value=2.1 Score=31.58 Aligned_cols=33 Identities=12% Similarity=0.000 Sum_probs=27.5
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
+..+.-.|+.+|+.|+|++|+..|++++...+.
T Consensus 43 ~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 43 EAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 344566799999999999999999999986544
No 255
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=84.57 E-value=0.8 Score=50.76 Aligned_cols=15 Identities=33% Similarity=0.403 Sum_probs=6.8
Q ss_pred CCeEEEccCCcccch
Q 016518 235 QPLEFITDEEQVIAG 249 (388)
Q Consensus 235 ~p~~f~lG~~~v~~g 249 (388)
+.+.+.+.+..++|-
T Consensus 323 ~vl~v~v~~~~iv~y 337 (1630)
T 1xi4_A 323 QVLSVCVEEENIIPY 337 (1630)
T ss_pred eEEEEEEccchhhhh
Confidence 334444544444443
No 256
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=84.04 E-value=2.9 Score=38.51 Aligned_cols=61 Identities=8% Similarity=-0.071 Sum_probs=48.0
Q ss_pred HHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 317 AAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 317 ~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+.-.-..|.-++..|++..|+..+.+|+...+.. + ...+..+++|++.++..+++|++|+
T Consensus 13 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~---~-------~~~~~~~~~~l~~~~~~~g~~~~A~ 73 (373)
T 1hz4_A 13 HAEFNALRAQVAINDGNPDEAERLAKLALEELPPG---W-------FYSRIVATSVLGEVLHCKGELTRSL 73 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT---C-------HHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC---c-------hhHHHHHHHHHHHHHHhcCcHHHHH
Confidence 34555667888899999999999999999876321 1 1235678899999999999999875
No 257
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=83.54 E-value=2.8 Score=38.64 Aligned_cols=60 Identities=18% Similarity=0.078 Sum_probs=46.7
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHc
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKL 380 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl 380 (388)
.-+.|-++|+.|+|++|+..++..|..+......+++|.++++++...|..=+-++.+.+
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl 176 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIEL 176 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444799999999999999999999998877655667777788777777665555555544
No 258
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=83.46 E-value=2.6 Score=31.08 Aligned_cols=54 Identities=9% Similarity=-0.072 Sum_probs=41.0
Q ss_pred hHHHHhhhHHhccc---HHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhhC
Q 016518 320 RKKEEGNLLFKNGK---YERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIRL 388 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~---~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai~ 388 (388)
.+-..|..+|-.++ ..+|...+++|+.+-+.+ +..+..++..+++.++|.+||.
T Consensus 8 ~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~---------------~rA~~~lg~~~~~~g~y~~Ai~ 64 (93)
T 3bee_A 8 QLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN---------------EAALSLIANDHFISFRFQEAID 64 (93)
T ss_dssp HHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC---------------HHHHHHHHHHHHHcCCHHHHHH
Confidence 34456677754444 799999999999965443 4666778999999999999973
No 259
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=83.27 E-value=5.7 Score=29.01 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=30.3
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
..|..+-+.|.++|+.++|.+|...++++...-+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te 84 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSD 84 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcccc
Confidence 6788888999999999999999999999997543
No 260
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=82.78 E-value=1.8 Score=37.87 Aligned_cols=23 Identities=30% Similarity=0.504 Sum_probs=11.8
Q ss_pred HhhhHHh----cccHHHHHHHHHHHHh
Q 016518 324 EGNLLFK----NGKYERAGKKYNKAAD 346 (388)
Q Consensus 324 ~Gn~~fk----~~~~~~A~~~Y~kal~ 346 (388)
.|.-++. .+++.+|+..|++|+.
T Consensus 44 lg~~~~~g~~~~~~~~~A~~~~~~a~~ 70 (273)
T 1ouv_A 44 LGVLYYQGQGVEKNLKKAASFYAKACD 70 (273)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCCHHHHHHHHHHHHH
Confidence 3444444 5555555555555554
No 261
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=82.45 E-value=1.9 Score=42.56 Aligned_cols=29 Identities=14% Similarity=0.074 Sum_probs=22.2
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
.....|+-+++.|++++|+..|.+++...
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 403 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKSSTMD 403 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 34456778888888888888888888743
No 262
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=81.46 E-value=2.2 Score=37.35 Aligned_cols=28 Identities=29% Similarity=0.342 Sum_probs=19.2
Q ss_pred hHHHHhhhHHh----cccHHHHHHHHHHHHhh
Q 016518 320 RKKEEGNLLFK----NGKYERAGKKYNKAADC 347 (388)
Q Consensus 320 ~~k~~Gn~~fk----~~~~~~A~~~Y~kal~~ 347 (388)
.+...|.-++. .+++.+|+..|++|+..
T Consensus 76 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 107 (273)
T 1ouv_A 76 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDL 107 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc
Confidence 34455666667 77788888888777763
No 263
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=80.90 E-value=1.6 Score=32.73 Aligned_cols=38 Identities=0% Similarity=0.018 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 335 ERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 335 ~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..|+..|.+++..-+.. ..++.|+|.+++++++|++|+
T Consensus 2 ~~a~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 39 (115)
T 2kat_A 2 QAITERLEAMLAQGTDN---------------MLLRFTLGKTYAEHEQFDAAL 39 (115)
T ss_dssp CCHHHHHHHHHTTTCCC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHccCHHHHH
Confidence 35888999999854432 467899999999999999986
No 264
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=80.09 E-value=1.4 Score=39.56 Aligned_cols=55 Identities=16% Similarity=0.151 Sum_probs=46.5
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+.-+...|.-+++.|+|.+|+..|++|+..-+.. ...+.|+|.+|.++++|++|+
T Consensus 38 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~ 92 (281)
T 2c2l_A 38 AVYYTNRALCYLKMQQPEQALADCRRALELDGQS---------------VKAHFFLGQCQLEMESYDEAI 92 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHH
Confidence 3445678999999999999999999999864332 467899999999999999986
No 265
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=80.06 E-value=3.2 Score=32.64 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=38.1
Q ss_pred HhHHHHhhhHHh----cccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHH----ccCchhhh
Q 016518 319 GRKKEEGNLLFK----NGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK----LKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk----~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lK----l~~~~~ai 387 (388)
...-..|.-++. .+++.+|+..|++|.+.- . ...+.||+.+|.. .+++.+|+
T Consensus 58 ~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g-~----------------~~a~~~Lg~~y~~G~g~~~d~~~A~ 117 (138)
T 1klx_A 58 NGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLN-D----------------QDGCLILGYKQYAGKGVVKNEKQAV 117 (138)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-C----------------HHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcCC-C----------------HHHHHHHHHHHHCCCCCCcCHHHHH
Confidence 334455666666 788999999999988641 1 4567889999998 88888775
No 266
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=79.65 E-value=1.7 Score=36.99 Aligned_cols=30 Identities=20% Similarity=0.142 Sum_probs=23.4
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADC 347 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~ 347 (388)
+..+-..|..++..+++.+|+..|++|++.
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~ 47 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQ 47 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHc
Confidence 445566778888888999999999998763
No 267
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=78.69 E-value=4.4 Score=36.43 Aligned_cols=15 Identities=20% Similarity=0.392 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhhh
Q 016518 334 YERAGKKYNKAADCV 348 (388)
Q Consensus 334 ~~~A~~~Y~kal~~l 348 (388)
+++|+..|.+|+..+
T Consensus 80 ~~~A~~~~~rAl~~~ 94 (308)
T 2ond_A 80 SDEAANIYERAISTL 94 (308)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHh
Confidence 399999999999854
No 268
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=77.90 E-value=0.45 Score=42.50 Aligned_cols=65 Identities=15% Similarity=0.122 Sum_probs=0.0
Q ss_pred hhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCC-CCChHHHHHHHHHHHHhhhHHHHH
Q 016518 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDG-SFVDDEQKLVKSLRVSCWLNSAAC 376 (388)
Q Consensus 312 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~-~~~~~~~~~~~~~~~~~~~NlA~c 376 (388)
...+..|..+-.+|-++=++|+|++|+.+|..|+.+|-... ...++..++.-.-++.-|+++|.-
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~ 82 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAEN 82 (257)
T ss_dssp ------------------------------------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44567788888888888899999999999999999986522 223344445555667778888764
No 269
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=77.77 E-value=1.5 Score=41.71 Aligned_cols=30 Identities=7% Similarity=0.066 Sum_probs=25.5
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
+...|.-++..|+|.+|+..|.+|+.+.+.
T Consensus 97 ~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 97 WGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 345678899999999999999999987653
No 270
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.41 E-value=6.5 Score=30.35 Aligned_cols=68 Identities=10% Similarity=-0.001 Sum_probs=49.9
Q ss_pred HHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC-------CCCCChHHHHHHHHHHHHhhhHHHHHHHHccC
Q 016518 315 IEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE-------DGSFVDDEQKLVKSLRVSCWLNSAACCLKLKD 382 (388)
Q Consensus 315 ~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~-------~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~ 382 (388)
.+.|-.+-..|-..=..|+-..|+.+|++++..|+. .+....+.|++.+.++-....|+..+.-++..
T Consensus 19 h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~ 93 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEI 93 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555568888899999999888853 22355689999999999999999998877653
No 271
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=76.97 E-value=1.4 Score=36.38 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=32.8
Q ss_pred hcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCch
Q 016518 330 KNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQ 384 (388)
Q Consensus 330 k~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~ 384 (388)
+-+.|++|+..|++|+..-+.+ ...+.|++.|++++++++
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~---------------aea~~n~G~~l~~l~~~~ 53 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLD---------------ADNLTRWGGVLLELSQFH 53 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHS
T ss_pred HHhHHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHhcccc
Confidence 4577999999999999865543 578899999999998765
No 272
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=76.25 E-value=3.8 Score=36.88 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=33.8
Q ss_pred HHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 323 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..|+-+.+.|++.+|...|++|++.-+... ..+++|++.++.+++++++|+
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~ 154 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDIDP--------------TLVYIQYMKFARRAEGIKSGR 154 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSCT--------------HHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccccCc--------------cHHHHHHHHHHHHhcCHHHHH
Confidence 456666778889999999999987433211 015666777777777666654
No 273
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=75.75 E-value=3.9 Score=36.53 Aligned_cols=56 Identities=9% Similarity=-0.096 Sum_probs=41.4
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..+-..|+.++..|++++|+..|.++++.-+... ....+.|++.++..++++++|+
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~-------------~~~a~~~l~~~~~~~g~~~~a~ 275 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTAA-------------DGQTRXTFQEILAALGTGDALA 275 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGG-------------GGHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcccccc-------------cchHHHHHHHHHHHcCCCCcHH
Confidence 3445668888899999999999999988543210 1356788888988888887765
No 274
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=74.32 E-value=7 Score=32.37 Aligned_cols=61 Identities=7% Similarity=-0.020 Sum_probs=49.4
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCC-ChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSF-VDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~-~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+.++...++..+.|..|+..+..++.+.+.++.. + ...+...+..+|..++..++|.+|.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s-------p~~~~~~l~~ladalf~~~eyrrA~ 83 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS-------PPQKYQLLVYHADSLFHDKEYRNAV 83 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc-------HHHHHHHHHHHHHHHHcccHHHHHH
Confidence 35677888999999999999999999987654432 3 2345677888999999999999885
No 275
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=73.85 E-value=6.1 Score=29.27 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=27.0
Q ss_pred HhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 319 GRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 319 ~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
.-+..-|+-+|+.|++..|+..|++|+++-+.
T Consensus 47 ~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 47 SVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 44567799999999999999999999986543
No 276
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=73.41 E-value=6.4 Score=32.09 Aligned_cols=52 Identities=12% Similarity=0.002 Sum_probs=35.7
Q ss_pred HHhhhHHhcc---cHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 323 EEGNLLFKNG---KYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 323 ~~Gn~~fk~~---~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
+-|..+.+.. ++++|+..++..++.- .+ .-+.-|+.|+|..|.|+++|.+|+
T Consensus 37 ~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~------~p-------~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 37 EYAWCLVRSKYNDDIRKGIVLLEELLPKG------SK-------EEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHS------CH-------HHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhcC------Cc-------cchHHHHHHHHHHHHHccCHHHHH
Confidence 3444555555 6667777777776521 01 124578899999999999999986
No 277
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=69.52 E-value=5.4 Score=33.74 Aligned_cols=26 Identities=15% Similarity=-0.027 Sum_probs=16.0
Q ss_pred HHHhhhHHh----cccHHHHHHHHHHHHhh
Q 016518 322 KEEGNLLFK----NGKYERAGKKYNKAADC 347 (388)
Q Consensus 322 k~~Gn~~fk----~~~~~~A~~~Y~kal~~ 347 (388)
-..|.-++. .+++.+|+..|++|+..
T Consensus 89 ~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 118 (212)
T 3rjv_A 89 IVLARVLVNRQAGATDVAHAITLLQDAARD 118 (212)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHcCCCCccCHHHHHHHHHHHHHc
Confidence 344555555 66777777777777653
No 278
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=69.07 E-value=4.4 Score=41.60 Aligned_cols=65 Identities=15% Similarity=0.132 Sum_probs=39.7
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhh-----hcCCCCCChHHHHHH-HHHHHHhhhHHHH-HHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADC-----VSEDGSFVDDEQKLV-KSLRVSCWLNSAA-CCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~-----l~~~~~~~~~~~~~~-~~~~~~~~~NlA~-c~lKl~~~~~ai 387 (388)
+..|..+.+.++++.|.++|.++-++ |... ..+.+...++ +.....-..|.|. |+++++++++|+
T Consensus 685 ~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~-~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~ 756 (814)
T 3mkq_A 685 RALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSS-FNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAK 756 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHH-cCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHH
Confidence 77899999999999999999997432 2111 1122222222 2222233345554 777788877776
No 279
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=66.23 E-value=6.9 Score=37.93 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=27.7
Q ss_pred HHHHHHhHHHHhhhHHhcccHHHHHHHHHHHH
Q 016518 314 KIEAAGRKKEEGNLLFKNGKYERAGKKYNKAA 345 (388)
Q Consensus 314 ~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal 345 (388)
-+..+...-..|+-+++.|+|+.|+..|+||.
T Consensus 144 ~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~ 175 (449)
T 1b89_A 144 LYNNVSNFGRLASTLVHLGEYQAAVDGARKAN 175 (449)
T ss_dssp HHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred HHHHhhhHHHHHHHHHHhccHHHHHHHHHHcC
Confidence 34566777888999999999999999999994
No 280
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=64.99 E-value=6.4 Score=35.62 Aligned_cols=55 Identities=9% Similarity=-0.031 Sum_probs=39.9
Q ss_pred HHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 321 KKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 321 ~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.--.|..+-..|+|.+|++.|.+|+.-- ..+.. .....+|++.|+.++++.++|+
T Consensus 174 ~~~LG~al~~LG~~~eAl~~l~~a~~g~-~~P~~-----------~~da~~~~glaL~~lGr~deA~ 228 (282)
T 4f3v_A 174 GVAHGVAAANLALFTEAERRLTEANDSP-AGEAC-----------ARAIAWYLAMARRSQGNESAAV 228 (282)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTST-TTTTT-----------HHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhcCC-CCccc-----------cHHHHHHHHHHHHHcCCHHHHH
Confidence 3445788888899999999999887421 10100 2456789999999999999885
No 281
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=63.80 E-value=6.8 Score=30.67 Aligned_cols=47 Identities=9% Similarity=-0.148 Sum_probs=37.2
Q ss_pred HhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHH----ccCchhhh
Q 016518 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLK----LKDYQGIR 387 (388)
Q Consensus 324 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lK----l~~~~~ai 387 (388)
.|.-++..+.+++|+..|++|.+.- . ...+.|++.+|.. .+++.+|+
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g-~----------------~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN-S----------------GNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT-C----------------HHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC-C----------------HHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5666777788888999999998741 1 4677899999998 78888775
No 282
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=62.20 E-value=26 Score=32.97 Aligned_cols=70 Identities=14% Similarity=0.076 Sum_probs=53.9
Q ss_pred HHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcCC-------CCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 318 AGRKKEEGNLLFKNGKYERAGKKYNKAADCVSED-------GSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 318 a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~-------~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
...+-..|......++...|+..|.+|+.+..-. ..+-..+...+++++..+..-++.+++.++++.+|+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 3444455666677899999999999999977431 122245567888999999999999999999999886
No 283
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=62.18 E-value=13 Score=26.23 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=32.5
Q ss_pred chhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 311 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
.+++-+.-.+--+.|-.+..+|++.+|+.++.+|+..+..
T Consensus 10 ~e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 10 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 3445455666677899999999999999999999998754
No 284
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=60.87 E-value=8.6 Score=34.79 Aligned_cols=55 Identities=7% Similarity=-0.023 Sum_probs=41.5
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..-..|.-+++.++|.+|+..|++++.+-+ ..+....+.|++.++..+++|.+|+
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d-------------~~~~~~a~~~LG~al~~LG~~~eAl 191 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPD-------------KFLAGAAGVAHGVAAANLALFTEAE 191 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC-------------HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCC-------------cccHHHHHHHHHHHHHHCCCHHHHH
Confidence 345567788999999999999987765321 1123467899999999999999986
No 285
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.82 E-value=5.6 Score=38.26 Aligned_cols=56 Identities=16% Similarity=0.138 Sum_probs=45.5
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.....|.-+++.|+|..|++.|.++..++.... .++.+++++..+++..++|..|.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~------------~kid~~l~~irl~l~~~d~~~~~ 188 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG------------AKIDVMLTIARLGFFYNDQLYVK 188 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC------------SHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH------------HHHHHHHHHHHHHHHhccHHHHH
Confidence 356789999999999999999999998775432 25678888888888888887763
No 286
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=60.27 E-value=10 Score=26.90 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=26.6
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
.+...|.-+++.|+|.+|+..|++|+..-+.
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 4566789999999999999999999986544
No 287
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=60.19 E-value=23 Score=25.85 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=37.4
Q ss_pred ccHHHHHHHHHHHHhhhcC----CCCCChHHHHHHHHHHHHhhhHHHHHHHHc
Q 016518 332 GKYERAGKKYNKAADCVSE----DGSFVDDEQKLVKSLRVSCWLNSAACCLKL 380 (388)
Q Consensus 332 ~~~~~A~~~Y~kal~~l~~----~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl 380 (388)
|+-..|+..|++++.-|.. ......+.++..+.+.-....|+..+.-+|
T Consensus 33 G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 33 GQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp SSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888888887753 122256788899999999999988876655
No 288
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=58.26 E-value=2.1 Score=41.54 Aligned_cols=39 Identities=21% Similarity=0.192 Sum_probs=0.0
Q ss_pred hhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 312 QGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 312 ~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
.+.++.|..+-.+|.++=+.|+|++|+.+|+.|+.+|..
T Consensus 5 ~~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 5 NTNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 446778888889999999999999999999999999865
No 289
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=57.30 E-value=7.4 Score=37.81 Aligned_cols=41 Identities=17% Similarity=0.069 Sum_probs=25.1
Q ss_pred hhHHHHHHhHHHHh--hhHHhc-ccHHHHHHHHHHHHhhhcCCC
Q 016518 312 QGKIEAAGRKKEEG--NLLFKN-GKYERAGKKYNKAADCVSEDG 352 (388)
Q Consensus 312 ~e~~~~a~~~k~~G--n~~fk~-~~~~~A~~~Y~kal~~l~~~~ 352 (388)
.+|+..|+..++.+ +.-=+. .--++|+.+|++|+.+|+...
T Consensus 423 ~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 423 QEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34555555555554 111111 224789999999999997643
No 290
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=56.23 E-value=11 Score=27.28 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=26.5
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
.+...|.-+++.|+|.+|+..|++|+.+.+.
T Consensus 43 a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 43 TYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 3456789999999999999999999987543
No 291
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=52.14 E-value=19 Score=34.47 Aligned_cols=21 Identities=10% Similarity=0.044 Sum_probs=15.7
Q ss_pred HHhhhHHHHHHHH----ccCchhhh
Q 016518 367 VSCWLNSAACCLK----LKDYQGIR 387 (388)
Q Consensus 367 ~~~~~NlA~c~lK----l~~~~~ai 387 (388)
...+.|++.+|.+ .+++.+|+
T Consensus 399 ~~a~~~Lg~~y~~g~g~~~d~~~A~ 423 (490)
T 2xm6_A 399 SAAQVQLGEIYYYGLGVERDYVQAW 423 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHH
Confidence 3567788888888 77777765
No 292
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=51.16 E-value=27 Score=25.91 Aligned_cols=41 Identities=15% Similarity=0.216 Sum_probs=33.8
Q ss_pred CchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhcC
Q 016518 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVSE 350 (388)
Q Consensus 310 ~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~ 350 (388)
+.+++-+.-.+--+.|-.++.+|++..|+.++.+|+..+..
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 34555566677778899999999999999999999998854
No 293
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=50.59 E-value=25 Score=33.64 Aligned_cols=29 Identities=21% Similarity=0.236 Sum_probs=20.4
Q ss_pred HhHHHHhhhHHh----cccHHHHHHHHHHHHhh
Q 016518 319 GRKKEEGNLLFK----NGKYERAGKKYNKAADC 347 (388)
Q Consensus 319 ~~~k~~Gn~~fk----~~~~~~A~~~Y~kal~~ 347 (388)
......|..++. .+++.+|+..|++|++.
T Consensus 40 ~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~ 72 (490)
T 2xm6_A 40 KAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ 72 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC
Confidence 344555666666 78888888888888763
No 294
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=48.16 E-value=31 Score=25.04 Aligned_cols=39 Identities=13% Similarity=0.098 Sum_probs=35.1
Q ss_pred chhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 311 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
..+.++.|...-+.|..++++|++..|+.++.=|-.+|+
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLD 66 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWLE 66 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999988877775
No 295
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=46.23 E-value=34 Score=24.87 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=34.2
Q ss_pred chhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 311 NQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 311 ~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
..+-++.|...-+.|..++++|++..|+.++.=|-.+|+
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwLD 70 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLLD 70 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 366789999999999999999999999999888877664
No 296
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=46.08 E-value=22 Score=32.59 Aligned_cols=53 Identities=8% Similarity=-0.109 Sum_probs=38.5
Q ss_pred HHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 322 KEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 322 k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
--.|.-++..|++++|++.+.+++..-+. . ....++.=++.|++++++.+.|.
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~---~----------~~lea~~l~vqi~L~~~r~d~A~ 156 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEA---E----------GTTELLLLAIEVALLNNNVSTAS 156 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCS---T----------THHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCC---c----------CcHHHHHHHHHHHHHCCCHHHHH
Confidence 35678888999999999999999764321 0 12455566778888888887774
No 297
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=45.80 E-value=29 Score=32.86 Aligned_cols=56 Identities=20% Similarity=0.100 Sum_probs=45.4
Q ss_pred HHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 323 EEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 323 ~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..|+-+|..|+|.+|...|++.++.|.... + ..+.+-+|+..+..|..++++.++.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d---d------~~~llev~lle~~~~~~~~n~~k~k 159 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLD---D------KNLLVEVQLLESKTYHALSNLPKAR 159 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSS---C------THHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccc---c------chhHHHHHHHHHHHHHHhccHHHHH
Confidence 458889999999999999999999986521 1 3567788888888888888887653
No 298
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=45.61 E-value=19 Score=34.98 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=19.5
Q ss_pred HHhhhHHhcccHHHHHHHHHHHHhh
Q 016518 323 EEGNLLFKNGKYERAGKKYNKAADC 347 (388)
Q Consensus 323 ~~Gn~~fk~~~~~~A~~~Y~kal~~ 347 (388)
..|+-+.+.|++.+|...|++|+..
T Consensus 326 ~~~~~~~~~g~~~~A~~~~~~al~~ 350 (530)
T 2ooe_A 326 AYADYEESRMKYEKVHSIYNRLLAI 350 (530)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCHHHHHHHHHHHhCc
Confidence 3455566788999999999999874
No 299
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=45.20 E-value=20 Score=34.74 Aligned_cols=43 Identities=12% Similarity=-0.048 Sum_probs=28.3
Q ss_pred hcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 330 KNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 330 k~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
..|++.+|...|.+|++..+.. ..++++++..+.+++++++|.
T Consensus 403 ~~~~~~~A~~~~e~al~~~p~~---------------~~~~~~~~~~~~~~g~~~~Ar 445 (530)
T 2ooe_A 403 CSKDKSVAFKIFELGLKKYGDI---------------PEYVLAYIDYLSHLNEDNNTR 445 (530)
T ss_dssp HTCCHHHHHHHHHHHHHHHTTC---------------HHHHHHHHHHHTTTTCHHHHH
T ss_pred HcCChhHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHhCCCHhhHH
Confidence 4666667777777776654321 356677777777777777664
No 300
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=42.01 E-value=17 Score=28.58 Aligned_cols=33 Identities=30% Similarity=0.333 Sum_probs=28.6
Q ss_pred HHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 316 EAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 316 ~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
+.|..+-.+|.+++.+|+.-+|..+|-+|...+
T Consensus 5 ~lAe~yL~EA~ell~kGD~vQAsEK~ykAaeea 37 (129)
T 2jpu_A 5 TSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEA 37 (129)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 467888899999999999999999999988643
No 301
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=39.67 E-value=25 Score=29.32 Aligned_cols=27 Identities=11% Similarity=-0.010 Sum_probs=24.2
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHh
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAAD 346 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~ 346 (388)
.-|.-|....+.|+++-|.++|+++-+
T Consensus 36 ~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 36 TWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 468889999999999999999999765
No 302
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=38.11 E-value=21 Score=28.00 Aligned_cols=23 Identities=17% Similarity=0.137 Sum_probs=19.7
Q ss_pred HHHHhhhHHHHHHHHccCchhhh
Q 016518 365 LRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 365 ~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+--|+..+|..+.|+++|.+|+
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHH
Confidence 35567788999999999999986
No 303
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=37.66 E-value=62 Score=34.10 Aligned_cols=62 Identities=27% Similarity=0.466 Sum_probs=49.0
Q ss_pred CCCCCCCEEEEEEEEEEc-CCc-------------------------------EEecccCCCCCeEEeeCCCcccccHHH
Q 016518 60 DTPEFGDEVTIHYVGTLL-DGT-------------------------------KFDSTRDRYDPLTFKLGTGQVATGLDN 107 (388)
Q Consensus 60 ~~~~~gd~V~v~y~~~~~-dg~-------------------------------~~~ss~~~~~p~~~~lg~~~~~~g~~~ 107 (388)
..+..|..|.|.|+..+. +|. .+++. ..+.|.+|.+.+.+-++.
T Consensus 559 ~~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~----~e~~fe~g~g~~~~~le~ 634 (950)
T 3htx_A 559 QSITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESN----EEIEFEVGTGSMNPHIES 634 (950)
T ss_dssp -CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEE----EEEEEEETTTCBCHHHHH
T ss_pred eccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhccccc----HHHHHHHhcCCccchhhh
Confidence 567899999999999885 331 22222 578899999999999999
Q ss_pred HhcccccCceEEEEEEcC
Q 016518 108 GIITMKKRECAVFTFTLP 125 (388)
Q Consensus 108 ~l~~m~~Ge~~~v~~~vp 125 (388)
.+.-|..|+...|....|
T Consensus 635 vV~qms~gqT~~F~~~~P 652 (950)
T 3htx_A 635 EVTQMTVGEYASFKMTPP 652 (950)
T ss_dssp HHTTCCTTCEEEEEESSC
T ss_pred eeeeccccceeEEeccCc
Confidence 999999999999944455
No 304
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=34.33 E-value=63 Score=21.08 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=32.9
Q ss_pred CchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhhc
Q 016518 310 NNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCVS 349 (388)
Q Consensus 310 ~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~ 349 (388)
+..+.+..|.++-..+--...=.+...|++.-++||++|.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 4566788888888888888777899999999999998874
No 305
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=31.44 E-value=55 Score=31.11 Aligned_cols=27 Identities=11% Similarity=-0.028 Sum_probs=21.3
Q ss_pred HHHhhhHHhcc---cHHHHHHHHHHHHhhh
Q 016518 322 KEEGNLLFKNG---KYERAGKKYNKAADCV 348 (388)
Q Consensus 322 k~~Gn~~fk~~---~~~~A~~~Y~kal~~l 348 (388)
-..|.-+++.| ++.+|+..|++|+..-
T Consensus 180 ~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g 209 (452)
T 3e4b_A 180 VELATVYQKKQQPEQQAELLKQMEAGVSRG 209 (452)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCcccHHHHHHHHHHHHHCC
Confidence 44566777788 9999999999998743
No 306
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=29.26 E-value=1.5 Score=43.07 Aligned_cols=46 Identities=24% Similarity=0.315 Sum_probs=36.3
Q ss_pred hHHHHhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhhC
Q 016518 320 RKKEEGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIRL 388 (388)
Q Consensus 320 ~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai~ 388 (388)
.+...|.++|..|.|+.|.-.|+. ++-|.-||.|+.+|++|+.|++
T Consensus 146 ~iq~VGDrcf~e~lYeAAKilys~-----------------------isN~akLAstLV~L~~yq~AVd 191 (624)
T 3lvg_A 146 HIQQVGDRCYDEKMYDAAKLLYNN-----------------------VSNFGRLASTLVHLGEYQAAVD 191 (624)
T ss_dssp CTHHHHHHHHHSCCSTTSSTTGGG-----------------------SCCCTTTSSSSSSCSGGGSSTT
T ss_pred cHHHHHHHHHHccCHHHHHHHHHh-----------------------CccHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999888666654 2344668999999999999874
No 307
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=26.67 E-value=91 Score=24.88 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=35.5
Q ss_pred cCchhHHHHHHhHHHHhhhHHhcccHHHHHHHHHHHHhhh
Q 016518 309 MNNQGKIEAAGRKKEEGNLLFKNGKYERAGKKYNKAADCV 348 (388)
Q Consensus 309 l~~~e~~~~a~~~k~~Gn~~fk~~~~~~A~~~Y~kal~~l 348 (388)
.+...-+..|..+-..+..+...|+++.|.-.|-|++.++
T Consensus 31 i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 31 IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3456678999999999999999999999999999987776
No 308
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=21.62 E-value=2.8e+02 Score=21.27 Aligned_cols=33 Identities=0% Similarity=-0.082 Sum_probs=21.3
Q ss_pred CCCEEEEEEEEEEcCCcEEecccCCCCCeEEee
Q 016518 64 FGDEVTIHYVGTLLDGTKFDSTRDRYDPLTFKL 96 (388)
Q Consensus 64 ~gd~V~v~y~~~~~dg~~~~ss~~~~~p~~~~l 96 (388)
.|+.+.+.+++.+.....+.=.+..+.-+.|.|
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v 48 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVV 48 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEE
Confidence 566888888888865544444444455566655
No 309
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=21.33 E-value=58 Score=29.69 Aligned_cols=40 Identities=10% Similarity=-0.004 Sum_probs=27.8
Q ss_pred ccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 332 GKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 332 ~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
++++.|...|+++..-.+. + -...+++| |++++++|++|.
T Consensus 192 ~~~q~A~~~f~El~~~~p~--------~-----~~~~lLln---~~~~~g~~~eAe 231 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTFPT--------W-----KTQLGLLN---LHLQQRNIAEAQ 231 (310)
T ss_dssp STTTHHHHHHHHHHTTSCS--------H-----HHHHHHHH---HHHHHTCHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCC--------c-----ccHHHHHH---HHHHcCCHHHHH
Confidence 3899999999997653321 0 01244555 999999999884
No 310
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=21.25 E-value=1e+02 Score=29.08 Aligned_cols=18 Identities=17% Similarity=0.095 Sum_probs=12.4
Q ss_pred HhcccHHHHHHHHHHHHh
Q 016518 329 FKNGKYERAGKKYNKAAD 346 (388)
Q Consensus 329 fk~~~~~~A~~~Y~kal~ 346 (388)
...+++.+|+..|++|+.
T Consensus 262 ~~~~d~~~A~~~~~~Aa~ 279 (452)
T 3e4b_A 262 PELGDVEQMMKYLDNGRA 279 (452)
T ss_dssp GGGCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 346677777777777764
No 311
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=21.08 E-value=1.3e+02 Score=28.12 Aligned_cols=48 Identities=8% Similarity=-0.063 Sum_probs=35.3
Q ss_pred HhhhHHhcccHHHHHHHHHHHHhhhcCCCCCChHHHHHHHHHHHHhhhHHHHHHHHccCchhhh
Q 016518 324 EGNLLFKNGKYERAGKKYNKAADCVSEDGSFVDDEQKLVKSLRVSCWLNSAACCLKLKDYQGIR 387 (388)
Q Consensus 324 ~Gn~~fk~~~~~~A~~~Y~kal~~l~~~~~~~~~~~~~~~~~~~~~~~NlA~c~lKl~~~~~ai 387 (388)
.+..++..|++..|+....+|+.+- .. ...|.-++.++.-.|++.+|+
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~Ln-~s---------------~~a~~llG~~~~~~G~~~eA~ 330 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGIDLE-MS---------------WLNYVLLGKVYEMKGMNREAA 330 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC-CC---------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhcC-CC---------------HHHHHHHHHHHHHCCCHHHHH
Confidence 4555677899999999999999863 21 234455677788888888875
No 312
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=20.95 E-value=30 Score=26.41 Aligned_cols=30 Identities=7% Similarity=0.259 Sum_probs=22.8
Q ss_pred CCcccchHHHHHccccCCcEEEEEecCCCCC
Q 016518 243 EEQVIAGLDRVAATMKKEEWAIVTINHEYGF 273 (388)
Q Consensus 243 ~~~v~~gle~~l~~M~~Ge~~~v~i~~~~~y 273 (388)
.+++++.|+.++-.|++|+.+..+ ...+||
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~pv-~t~~G~ 108 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISPIV-QTDSGL 108 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCCCE-ECSSSE
T ss_pred CCCCCchHHHHHhcCCCCCCCCcE-EeCCeE
Confidence 357899999999999999987643 344444
Done!